Cucsat.G19113.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G19113.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ribosomal protein S5 family protein
Location	ctg35: 683244 .. 693346 (+)
RNA-Seq Expression	Cucsat.G19113.T5
Synteny	Cucsat.G19113.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTCTCCTCGATTCTTTCCCTATTCATATTTCTTTTACCGTCCCTTTTCTTCCTTCTCTTCTTTACCCCAGCCGCACGCCCCATCGGCACCTTCCTTCTCTCCTACCGGTATCTCCATTGCTTCCCAACGCCACCACACTCATCAACCTTCCATCCCCCCGCTTCCCATCTCTCTCTCTCTCTCTCAACTACTTCCGTCGCCGGCCGCCGGCACCCACCACACCCATAACTTAATGTCGTTTTCTAGGAAAAGAATTTGATTGAATTGAATGGTTTGAACATTTTACGCATGTGAGACGGTTTAGTTGTGTGATTGAAGTTTAGGCTCAAAGAAATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTTCACCAAAACCTCATCAAAACCCCACTTCATATTTCCCGTAAAATCTCCGGTCTCCAACGCTTCCCTATCGAGAAAATTTCGAAGATTTCGTTGACGCGGTGTTACTCCACTGCTCATTCTAGAGTTGTGCATGATCTTCTCGCTGAGGTGGAGAAGGAGAAGAAGAGAGAAAGGGAGCAGAGGATAAGGGCTGGCCTTGATACCAAGGATATTGACAATGAAGATGAAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGACAAGAAAAATTCAAGGGTCACTGGGGACTTGAACGCCTATGAAGAACCCTCTGATTCTGATAGTGATGCAGACGATGAAAGGTTTAGTAGAGAATCTGTCAGAAAGAGGTTTGAAAACTTTCAGAAGAAATTCGAGAGGCACAAGGAATTGCTGAAGAACTTCACTGATGCTGGTATGACCAATTATGGAGAGTGCCTTCATTTCCTACTTGTTTTAATTTCTTAACATTTGGAGTAGTTTTTGTTAATGCATATTGGCTCGAATTTTGGAGGACTCCGAATATAGTGGCATCTTTTAACTTCTGTTTTTCTTAACTTTTGTTGTTTTTTTTCGTTATTTGATACTTTGTTGCAATGGACTAATATGCGGGTTAAACTTTTAGTAACGTTCTCCATGAATGCAACGCAACATGAACAAATGTATTGAAATGTTGCAAGAGTCCAGCAGTTGTTGATGGCGTTCTTTGATCTTGACATTGGAATATGTTCTCTCTTTCTTTCTATCTTAACCAAAAGAAAATTCATTTGAACATTTTTTTCGTTTGTTCAACATTTTGGACTTGTGTTAAAATCTTCCAACATCGCCAACATGTTTTTGACAGATAACATTGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGCAAAAACACTTCCAGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTAGCGGAGGGAAAGGAAAAGTTCATGCTTCAGCAGAAATTAAATAGGGCTATGCGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCCAACTATGGTGCCATTCAACGTAGACAAGGAGGTCCATCAGTTAATCTCGAGGAACGATCAGAATTTGCAAAACAGAAGCAAACCATACAGGGGATTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTCAATGCTATAGATAAGAAACTCGAAGAGAAGCTAGCAGAGCTGGACCATACCTTTGGAAAGAAAGGGAAGGTTCTAGAAGAGGAAATCCGAGATCTTGCAGAGGAGAGAAACTCGTTAACTGAGAAGAAGAGAAGGCCACTTTATCGAAAAGTATGTTACTCCTCATCTTGTTTGTGTGCACCTTTTACTTTGTTGTCTTCTGTCTTCTTTTGGCAGTTGATAGTTTCCAACTAAGTTTGCAGATTCAATAGTTAATTGTTTATTTTCTTGATCATCAAATTTCAATGTTGTGCTCGAGGATTCAAAGGGCTAAGTTGAGGCTTCCTCTCTTACTTTTGCTTATTCTTAGGACCTGACAAATTTGTTAGAAATTAGGCATGAGCTTTTCTCTGTTTCCTTAAATCTTTATGTTGTGTATATATATGTATATATTTGGCTTTTTGCTTAGTTTAAAAGCAAAGTATTTGTAACTATAGTTCTGAAAAGAGCTTTTTTGTTTCTGATTTGCGGCCTAGTGCATTTTTTTTTACAATGTTCCTATACCATGTTTTGGAAAAGACAAGGAAAAAAAAGAACCATATTTTTTGGTATCAAATACAATTTAATACTGAAACTGATTGAGTTAAGTGTCTTAAATCACCAATTCAACCCAAAAGCTTAACTGATAGGGTGAAAAGCAAATTTAATATAATATCTAACAAAATGTAACATTTCATTATTTGTGATTAGATTATTGCTCAACAATTTTATAATTGGGTTCATGAAAAACTCTTTTACAATTGGGTTTATTAACACATATACAAAGTATACTTTTACAGTGATTTTTCTTGGAAGTACTATTGATCTATAAATGTAGGTAGTTTTATCAGACAGGCTGAATGGATGCAATTGTGGTGCATTTTATTGTCTGTAATGTGGGCGGAGTTCACAATTTTAATTGTTATTTTCTTGAAAGGAGCATACAATATTATGTTCCTTGTCTTATATATCTTTATACTTGTTTTATAAATTATGATTATAGTTTTGGAAATGTTAATGTTTTTCTTTGGGCGTTATTGACAAGTTCTTTTTATAATTATTCATTAGGTCATATTTTCTAGATTAGAGACCCTTCTTCTTGGGTGGTGCTTTTGTGGGCTTGAGTTTTTTGGATCCCTTAGTATTTTTTAGTTTACCTTTTTGTCAATAAAGAAAAGAAAGTTAATATTTGAATTTATTAATAAAAAATATTAACTTTGATTGTTACATAATGATGGCAGGGCTTTGATGTGAAATTAATTGATGTGAACAGAACATGTAAAGTTACAAAGGTATGCAAAACCACCCTTCTAAATATCCTATTCAAATAAATAGTGTTTGATGATTGTACACTTTGATCTAGGGTGGAAAAGTTGTCAAATACACTGCTATCTTGGCTTGTGGGAACTACCATGGCATTGTTGGTTATGCAACAGCCAAAGGACCGGCAGTCCCGATTGCTTTACAAAAGGCATGTTGCTTGCCCTATTCAGTAGATTCCTTTTCTTCCTCATTTAGTTTTATTGAAATTTGAGAATTTAATCAAATGCTTAAAGTTCGAGTTCTTGAATGCCACAGAGTGATTTGATTTTTAAGGTGCTCAGTGAGTGTTTTGCTTGAGTTGCTTTGAAAATATTTAGCTAGGTTTTATCTGAAATCAAATAGTTAAGGGATGGAATCATGGAAGCATCTGGGTTGATCTATGTAAACGAGATAGAAATTGAATATGTGGTAATGCGAAAGTGAGAGAAACAAAAATTTATAGAAATATTTTTATATAATCTCAATTATTGTTATTATTGTTTTTAAAATGAAGCAGAAACTGTTCATTGATAGATGAAATGGGCGATAAAAGAAGTTAGTTCGAATAACATTTACAAAAGATTGTGGGGAGGAGAAGGGAGTTTATCAAGGGCCTCGAGAAATGGGAGAGTTCCACTGAAAAATGAATTTGAAGTCTTAATGAGGAGGACACTAGTTTGAGACAAAGACAAAGGTTAAGTGGGCTTAAGAGGAGGATGAAAGTTCTTTTTTCCATAGTATCACAAGAGGAGAAAAACGAACTTGATTGAGTTCTTGGTGCAGTGGTTGTGGAGGAAAGGGTGATTGAGGACATTTTTTTCATTTTTCTCGACTGAGCCCCCTCCTAGTGTGTTCCTAGACCTGTCCACAATGGTTTAGATTGGTGCCCCATCTTAGAAAGGGAGAGAGAAGAGTTGGAAGCTTATTTCACATTATAGGAAATTCAGAAGGTAGTATTTGGCTTTAGGAATAAATCACTTGGTCGGCCCACTGACCACAACTTGGAGATGGGACACAGCTTCATACTTTTTCTCAGTAAGTTATTATCTTTTACTTCCATACCTAACTCTAATCAATTTTCTCTCTTTCAAAAAGACTTAACAGTTACCATTTAACCAAAGAGCAAACTGAATTCATCACTGGGACTAAATTGTCGATCTTTGCTGACCTAATCAATTTGACTCAAAGATCTCTCCATCAACCCTCTCGACCCCTTCCGTGGCTCCCCTGATACTCTTTTCTGTTCCTCCTCTCACTTGTTATCACTCTACAAAACACAATGGTATGGGTGACCTTAATCATTAATGGAAGAAAAGTGCACAAACCTTGACGATGAAACTGATCCAGAAAAAGTATCTTTAGCCTTTTCTTAGAGTACTAATGTTATATTCTTTCTTGGCCAATTGAAAACAAATTATGTAAAGGACATTAAGGAATTAGATGGACTTGTTTCATCTATATGTTAAGTCTTTTCTAAAACCAGGTAAGGATGGGTTGACCTCCATCGATCATCGTCTCACAGAATTTACGAGGTTGGGGTGCTTGGGAAAAGCATGTACGTGTGGAAAAACTAAGCTTCAGTTTTTAAACCATATCCTTGTTTTGGATATCTTACAAAAACTAAGCTTCAGTTTGTTGATAGGGTCACCATTAGTTCGCTCCAAAGCTATAGGCGCATTGGTTAGACTACTACTGAAGGTATGGGTGCCTTGGGAAGTATTGTCATGATTTGAAACGACTCTTCCCACACTTTAAGGGAGGTCATTAAAAGGTGTTATCTCCCTTACCATTTACTTCTCCCTTGCTCCTTTACCTCTGTTTTTTTTTTTTTTTTTGATAGAAAGAACAACTTTCATGTGAAAAATGAAAGACTACTAGCGCATACAAAAAAATAAAAGTAAAAGCTAGTCAACCAAAACTCCTGACTAAAACAAAGGGGTCCAACTGAATAAATGTTACCAATAGAATAATTACAAAAGTTATTCAAAATCGAAGTCCAAAAGAATATATAAATTCTAATCAAAAACCAAACCTCACCATGATCCCTTTCCTTACCATGAAACACCTAATCGTTCCTTTCCCCCCAAATGTCCCACAAAATGGCACACACTCTTGCAAGCCATTAAAAACTCCCTTTCTATCTAAAGGGCAATGGAAGAGGAACTCCTCGACTGTTGCACAAACACCCTGATGGCTAGCACCGAACTCGTATAAAAGATAAAAAATAAAGCTCCACACATCCGTACATACCGGCAATCCCAAGAAAAATAATTAAGGTTTTCCTTCGACTTCTGACAAAGCATGCAGAAAAAAAGCCCAACAAGCGAAGTCCTCCTAACAAGCCTCTCAACGGTATTAACCCAACCTAGCAAAACTTGCCACTTGATTTTCTTAGGTACCTGTTAGGATACTTTTATCAAGATTTTTTTTGCTCACTCTTTTTTAATTGAAATATTTCATCAAGACAAGGATGAAAGAATTCAAGGGCGTACGAAAAACTCTGCTAAACCCCTAAAGAAAGTGTATTACCGCTGCTTTCTTTGGCTCAGCTTTTGTAGGGCTCTCCTCTAGTCTCTTTGGAGTGAAAGGAACGCACCCACCTTGGGGGACAAGGAAAATTATTTTGATAATTTTGTTAAAGATTTCTATTTCTAAAAGAGCATAGCTGACAGCATGGTTGAAATTGAATTTTATTGGAGATTTTTATGAGATCCTGAAATCATAGGCCAAGTGTTTTGCATGATCTTGGAACAGGCATGTGCAATCATCAATCAAGCCTAAAGCTAGGATAGCCAGAGATCAAAACTCTTGAGTCTCCATGGGAATCAATTAAAACAACCCTGGAAAGAATTAAAGGAACTTTATTGTTCGACGAAAGGGTCAACTTGGAAGGGTACATAATGAGTTTAACTAACTCTCTCTTTGAATTGATTTTCTTCTTGCACAAGTAGGAGAGAATCACGTTTGTGATTGTTAAACGGATATTTATGTGTTGAGTCCCCCATGATAACTATATTGTTTAATCAAATTCTTATTGCAAATTGGATTAAAACGATGTTCTTCTATGATCAATCAGCTACCTTTTTTTTTCCTATGAGAGATCTAAGTAGAAAAATATTCTATACAATCAGTGGCTTGAGGAGAAGTTGGGATTCATGATTATGAAGATTTTGTTACTTGATGTCTTGGCGGTATAAACACAATATGATATTGTTAGGATCCCAAGTATAAGAACACAACATAAAATGAAAAGATAACTGTATTGCAATATCATTGACCTTTGGAATGGACCATCTCTTTCCTCAAGTCCCACAAATGAACAATGCACCAAAATGACCCTCTCAACATACCCAACTCCTCACACCGTCACACAATCCCTGAATAATAAGGGACATAGAGAACTCTAATCTGGCATGGAGCTTCAAATTGGGAAATCAACATTCGAGTTTAAGAACTCAAACTCCTATCATAAGATGATTCTTCTATTTTTCTTGGCGGTTTAAGATGGTAGCAGCATTGGGTTTTAGACCAGTTTCTTTATTTACTTTATCTTGGTTCCACTAGTCATTCGTCACCCTCATGTGTTTGTCTTATTTTGTTGGTTAAAAACATCTACACTTCATTTACTACAATGAATATTTCTTCCTCACTCAAACTTCTAGAACTTGAGATGTTGGAAAAGTAAGATATTTTGATTATTAGTATAAACTTTAGAAACTATCAGTCATCGTTAAGAATATATCGAAATTGGATATTTTTTACAAGCTATTTGAAAAATTAATTATTCGCTGGCATTTTTCTCCTGTGATCATGTCTTCCTAACAAGAACAATATCTGAATATAAAAAAAATATAACTATAAAGAAACACAAGATAACCCCAAGTATAAGGCACCTGAAATCTCCCACTTGAGTAGACCTCCAGGTTTAGCTCACATTCTAGAAGAAAATGCAAATGTTGAAATCGAAGCAGTAGACCTGATTTCCCTTTTCGAAGTTGAAGGTTGCAATTTTAGTAATTTCCCTTACTTCTCCCCAATCAAATCAGCAGTAATTCCAAAGGAATTGTTGCCTAACGATTGTGAAGTTGTGTTAGTTTAAGTAAGTCTGTGTAATTCACATGCTCAGAATTTTCACGATCATTTCTTGGAACACAAGAGGCCTAAAAGAAGACCCATCCAAACGTTCTGCTCTTAAGAAGTTTATAAAAAATCATCACCAGGACAAGAATCAAAAATGGAAATTCTGGAATTAAATTTCATTAAAACAATATGGAGCTTATGGATATAGGTTGGGAATCAATGGATTCATTTGGCGCATCTGGAGGCATCCTTACTTTATGGGATATCCGTAAAATCACTCTGATGGGAAACCACAACAGGGCGATATTCCCTCTCAAGGAGGATATCCTAGGCAGAAATTGTTTTGGCAGCCAGTTGTAGACAGAGTTTACAAAAAGTCGGATAGATGGAAAAGGTTTAATATATCAAGAGGTGGAAGACAAATTCTTTGCAACTCGGTATTGGTGCCTCCCAACTTACCTACTATCGGTCCATCTTTGCCATTCTAGAAAAGGTTATCTCTAATTTTGAAAAGCTAATTTGAAAATTCTTTTGGGAGGGGAATTCGGGCAGCAAGATCAATCATTTGGCTTCCTGGAAAAGGGTCAAGCCTTCTCAATTAGATGGGGGCTAGGTTTGGGCAGCTTAAAATATAAAAACAAGGCCCTCCTTGCTAAATGGGGTTGGAGGTTTCTGAAAGAAGATTCTGTGTTGTGGTGACAAGTAATTAAAAGTGTCCTTGGCTGCAAAAAAATTGATTGGCGGACTCTAAACAAATCAGGAAACAACCTTAAAAGTCTGTGGATTGGTATCTCTAGAGATCGGAAAAGGGTGGTTGAGTTGGCAACGTTTAAACCAGGGAACAGAAGGAGAGTAGCTTTCTGAACAGATTCATGGGTTGGCCATCTCCCTCTTAAATCTCAGTTTCCAAATCTATTCAGATTAACTCAGCTCCCCAATGATTCAGTTGCTGCCCATTCGGATTATGTCACTAATTCTTGGTCATTAGTCTTTCGTGGATTGCTAAAAGATGAAATCCAAGATTTTCAAAGGCTATTAGCACTCATATCTCTGAAAGGTCTAACGGATTTGGATGCTAAGAGAGTTTGGTCATTAGAATACTCCGGTCATTTTTCAATTAAGTCCCTTTCGAAGCACCTCTCTCCCTCTTCTCATTTGGAAAAAGACTGCTTTAAAGCACTTTGGAAAACCAGCAGTCCAAGGAGAATAAGTGTCCTGGTTTGGATTGTGGCAGTTGATTCTCTAAATTGTTCCGAGACTATGCAAAGGACGCTTCCCAATATGTTGTTACCATCAGTGTGCCCTCTTATTCATTTTCTGTCCCTTTTCATCTAATTGCTGATTTAGCATATTTTCAATGCTTAAAACAGCTTGGGTCTTTGATGGTTTGCTAAGTACCAGTGTGTTCCAATCATTGAGGGGGCCTTACCTATCAAAAAAACCTTTTCATATTTGGGTTAATTTGATAAAAGCGCTTCTAATTGAGATTTGGTTTGAACATAACCAACGCATCTTCCATTATAAAAAAAGGATTTGGGTTGACATCGTAGACACTTCTAAAAGAAACGCTGCAGTATATCATTCTGCAAAATAACCTCCCCTCACTCAGTTGCCCTCCCTCTATTTATAACAAGTATAACGACCCTTATTCAATGACTACCAGTATCTCACTATCTATGTGATTACCTTTATGCTCCTTAACCAACACATACTAAATATCTAGTACTTATCCTTCAGAAAGAAATCCAGTTACTTGGAAGGAGCATACTAACAGTTTACAAGTACATGTTATCTCTCTATCTAAATCAAACCAGTGCATAGTACTTATAATTTCAGCTTACATTGTTAATGTGTGTTTGATGCTATTGAGCAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGACATGAGGAGCACACAATTGCACATGCAGTTCAGACGGCATACAAGAAAACAAAGGTATTCAACCATCTCTAATGTTCTTCTTTCTGCATCAAAAGTTCCCTCAACCTCTAATCATGGATTGAGGGGTCCTGCCCCCTCCAGCATCTGGAAAACACCAGAGGAAAAAGTAAGGACACTAAATCCTTTCGCAGTATTTACAATTTGGAGGCCTAACAGATAAATACCACACCGGTGGATGTGGCTGATGGGTTGCACCCTGACAACTTGTACCGACTGCTGGACAACAATCCTCTCTTTTTCTAGTTTTAGATTATCCATATGGAGTCCTTCCAACAAAAATTACTTTTTTTTGCTTGTATTTCATTTGATGGAAACTAATGATTCCTTTCTTAAATCTCCTTGTTTTTGTTGTCTGTTAAGATATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTAATTTATTCCTGTCCTCTATTATGGAGGTTAACGTAAAATGTATTTTTTCTTCGTTCCTCCACTGCTTCTAACTTGAGTTCAAATAACAGGTTATTGGCTCAAGAAACCCCCTGAACACTATGAGGGCCCTCTTCAAAGCTCTAAATGCAGTAAGTAGCCATTGAATTAAGATTGTTATTTTCCGATTCCACAAGGGACATTCTAGTTACGTTCTGATCATATGTCGTGTTTTCCAGATTGAGACTCCGAAGGATATTCAAGAAAAGTTCGGACGGACTGTTGTTGAGAAGTACTTGCTATGATAGGAGGTTTTCTTTTTCCTCTTTCCTTTTTGTTTCTAATTCAAAAGTTGCCGATTCTCAAGTAGATGTACAAAAAGGAATTTTGGTATTTAAGTTAAGACATCGAGGCTGTAACTTCTGTTAAAGGTTTGATTATCTCCCTTCTAAAACCCAAGGGCATCATTTTTTAACCTGTAGGACAGATTATGTTCAAGGTGGTCAATCTCTTACATCAATAATCAAGAGAACATCATTTTCAGCATGCCTTTGTTATTATATCCCCCTTCTTTGTGATAAGAGTGTATGTCGGACGGATTTTCATGAAATATTTGAAAATCAAACCAAAC

Coding sequence (CDS)

ATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTTCACCAAAACCTCATCAAAACCCCACTTCATATTTCCCGTAAAATCTCCGGTCTCCAACGCTTCCCTATCGAGAAAATTTCGAAGATTTCGTTGACGCGGTGTTACTCCACTGCTCATTCTAGAGTTGTGCATGATCTTCTCGCTGAGGTGGAGAAGGAGAAGAAGAGAGAAAGGGAGCAGAGGATAAGGGCTGGCCTTGATACCAAGGATATTGACAATGAAGATGAAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGACAAGAAAAATTCAAGGGTCACTGGGGACTTGAACGCCTATGAAGAACCCTCTGATTCTGATAGTGATGCAGACGATGAAAGGTTTAGTAGAGAATCTGTCAGAAAGAGGTTTGAAAACTTTCAGAAGAAATTCGAGAGGCACAAGGAATTGCTGAAGAACTTCACTGATGCTGATAACATTGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGCAAAAACACTTCCAGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTAGCGGAGGGAAAGGAAAAGTTCATGCTTCAGCAGAAATTAAATAGGGCTATGCGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCCAACTATGGTGCCATTCAACGTAGACAAGGAGGTCCATCAGTTAATCTCGAGGAACGATCAGAATTTGCAAAACAGAAGCAAACCATACAGGGGATTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTCAATGCTATAGATAAGAAACTCGAAGAGAAGCTAGCAGAGCTGGACCATACCTTTGGAAAGAAAGGGAAGGTTCTAGAAGAGGAAATCCGAGATCTTGCAGAGGAGAGAAACTCGTTAACTGAGAAGAAGAGAAGGCCACTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGAACATGTAAAGTTACAAAGGGTGGAAAAGTTGTCAAATACACTGCTATCTTGGCTTGTGGGAACTACCATGGCATTGTTGGTTATGCAACAGCCAAAGGACCGGCAGTCCCGATTGCTTTACAAAAGAAACTGTTCATTGATAGATGA

Protein sequence

MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKKLFIDR

Homology

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy Swiss-Prot
Match: P10128 (30S ribosomal protein S5 OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) OX=340047 GN=rpsE PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 2.8e-06
Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 325 EERNSLTEKKRRPLYRK-----GFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVG 384
           +E N   E+K RP  R+      F+ K++ + R  KVTKGG+  ++ A++  GN  G+VG
Sbjct: 22  QENNKRFERKSRPSSRQKVVKDEFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGNKKGLVG 81

Query: 385 YATAKGPAVPIALQKKL 397
             T K   VP A++K +
Sbjct: 82  MGTGKANEVPEAIKKAI 98

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy Swiss-Prot
Match: Q50301 (30S ribosomal protein S5 OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) OX=272634 GN=rpsE PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 21/70 (30.00%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 327 RNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGP 386
           RN+   + ++P ++  F+ +++ + R  K TKGG+ ++++ ++  GN  G +GY  AK  
Sbjct: 50  RNNQNRRFQKPAFKSEFEERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKAL 109

Query: 387 AVPIALQKKL 397
            VP A++K +
Sbjct: 110 EVPNAIKKAI 119

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy Swiss-Prot
Match: B2I8I6 (30S ribosomal protein S5 OS=Xylella fastidiosa (strain M23) OX=405441 GN=rpsE PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 28/75 (37.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 323 LAEERNSLT-EKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYA 382
           +AEER+  + ++ R      G   KL+ VNR  K  KGG+   +TA+   GN  G VG+ 
Sbjct: 1   MAEERSQRSRDRSREEKIDDGMIEKLVAVNRVSKTVKGGRQFTFTALTIVGNGEGSVGFG 60

Query: 383 TAKGPAVPIALQKKL 397
             K   VP+A+QK +
Sbjct: 61  YGKAREVPVAIQKSM 75

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy Swiss-Prot
Match: B0U5L6 (30S ribosomal protein S5 OS=Xylella fastidiosa (strain M12) OX=405440 GN=rpsE PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 28/75 (37.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 323 LAEERNSLT-EKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYA 382
           +AEER+  + ++ R      G   KL+ VNR  K  KGG+   +TA+   GN  G VG+ 
Sbjct: 1   MAEERSQRSRDRSREEKIDDGMIEKLVAVNRVSKTVKGGRQFTFTALTIVGNGEGSVGFG 60

Query: 383 TAKGPAVPIALQKKL 397
             K   VP+A+QK +
Sbjct: 61  YGKAREVPVAIQKSM 75

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy Swiss-Prot
Match: Q87E65 (30S ribosomal protein S5 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) OX=183190 GN=rpsE PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 28/75 (37.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 323 LAEERNSLT-EKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYA 382
           +AEER+  + ++ R      G   KL+ VNR  K  KGG+   +TA+   GN  G VG+ 
Sbjct: 1   MAEERSQRSRDRSREEKIDDGMIEKLVAVNRVSKTVKGGRQFTFTALTIVGNGEGSVGFG 60

Query: 383 TAKGPAVPIALQKKL 397
             K   VP+A+QK +
Sbjct: 61  YGKAREVPVAIQKSM 75

[Close]

BLAST of Cucsat.G19113.T5 vs. NCBI nr
Match: XP_004151847.1 (probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus] >KAE8652337.1 hypothetical protein Csa_022447 [Cucumis sativus])

HSP 1 Score: 761 bits (1964), Expect = 6.03e-275
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK
Sbjct: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394

[Close]

BLAST of Cucsat.G19113.T5 vs. NCBI nr
Match: XP_008462792.1 (PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis melo] >TYK00966.1 putative 37S ribosomal protein S5 [Cucumis melo var. makuwa])

HSP 1 Score: 742 bits (1915), Expect = 1.75e-267
Identity = 384/394 (97.46%), Postives = 389/394 (98.73%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKIS LQR PI+KISKISLTRCYSTAHSR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISCLQRLPIDKISKISLTRCYSTAHSR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREMRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEDDERFSTESVRKRFQNFQRKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNDPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           AIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK
Sbjct: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394

[Close]

BLAST of Cucsat.G19113.T5 vs. NCBI nr
Match: KAA0066311.1 (putative 37S ribosomal protein S5 [Cucumis melo var. makuwa])

HSP 1 Score: 742 bits (1915), Expect = 2.82e-267
Identity = 384/394 (97.46%), Postives = 389/394 (98.73%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKIS LQR PI+KISKISLTRCYSTAHSR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISCLQRLPIDKISKISLTRCYSTAHSR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREMRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEDDERFSTESVRKRFQNFQRKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNDPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           AIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK
Sbjct: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394

[Close]

BLAST of Cucsat.G19113.T5 vs. NCBI nr
Match: KAG6571211.1 (hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 655 bits (1690), Expect = 3.08e-233
Identity = 336/394 (85.28%), Postives = 366/394 (92.89%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQN IK+PLHISRKIS LQRFP E+  K   TRCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKSPLHISRKISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VV DLLAEVEKEK+REREQR RAGLDTKDID+ED EDYMGVGPLIEKL+K+  + TG+LN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEEP+DSDSD DDERFS ESV+KRF+ F++KF+RH+ELLK+FT+ DNIDDAFKWMSKID
Sbjct: 121 AYEEPTDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           +FEQKHF+LRPEYRVIGELMNRLKVA+GKEKF+LQQKLNRAMR+VEWKEAYDPNNPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
            IQ  Q GPSV+L E+S F K+KQ IQG+DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           +VVKY+A+LACGNYHGIVGYA AKGPAVPIALQK
Sbjct: 361 QVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK 394

[Close]

BLAST of Cucsat.G19113.T5 vs. NCBI nr
Match: XP_038902106.1 (uncharacterized protein LOC120088744 [Benincasa hispida] >XP_038902107.1 uncharacterized protein LOC120088744 [Benincasa hispida] >XP_038902108.1 uncharacterized protein LOC120088744 [Benincasa hispida])

HSP 1 Score: 655 bits (1689), Expect = 4.37e-233
Identity = 339/394 (86.04%), Postives = 365/394 (92.64%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQN IKTPLHIS K S   RFP E+I KIS TRCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISWKNSCFLRFPFEEIPKISATRCYSTASAR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VV DLLAEVEKEK+REREQR+RAG+DTKDID+ED EDYMGVGPLIEKL+K+  + TGDLN
Sbjct: 61  VVQDLLAEVEKEKQREREQRLRAGIDTKDIDDEDGEDYMGVGPLIEKLEKEKLKDTGDLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEEP+DSDSD DDERFS ESV+KRF++F++KF+RH+ELLKNFT  +NIDDAFKWMSKID
Sbjct: 121 AYEEPTDSDSDEDDERFSPESVKKRFDDFERKFKRHEELLKNFTATENIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           RFEQKHF+LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMRIVEWKEAYDPNNPANYG
Sbjct: 181 RFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIVEWKEAYDPNNPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
            IQ  Q GPS +L E+S F K++QTIQ  DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHGQVGPSDDLTEQSGFEKERQTIQRADDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           KVVKYTA+LACGNYHGIVGYATAKGPA+PIALQK
Sbjct: 361 KVVKYTALLACGNYHGIVGYATAKGPAIPIALQK 394

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy TrEMBL
Match: A0A0A0LNF1 (S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431220 PE=4 SV=1)

HSP 1 Score: 761 bits (1964), Expect = 1.17e-276
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK
Sbjct: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy TrEMBL
Match: A0A5D3BRU3 (Putative 37S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001480 PE=3 SV=1)

HSP 1 Score: 742 bits (1915), Expect = 8.45e-268
Identity = 384/394 (97.46%), Postives = 389/394 (98.73%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKIS LQR PI+KISKISLTRCYSTAHSR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISCLQRLPIDKISKISLTRCYSTAHSR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREMRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEDDERFSTESVRKRFQNFQRKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNDPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           AIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK
Sbjct: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy TrEMBL
Match: A0A1S3CJC3 (probable 37S ribosomal protein S5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501082 PE=3 SV=1)

HSP 1 Score: 742 bits (1915), Expect = 8.45e-268
Identity = 384/394 (97.46%), Postives = 389/394 (98.73%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKIS LQR PI+KISKISLTRCYSTAHSR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISCLQRLPIDKISKISLTRCYSTAHSR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREMRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEDDERFSTESVRKRFQNFQRKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNDPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           AIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK
Sbjct: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy TrEMBL
Match: A0A5A7VKZ9 (Putative 37S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003700 PE=3 SV=1)

HSP 1 Score: 742 bits (1915), Expect = 1.36e-267
Identity = 384/394 (97.46%), Postives = 389/394 (98.73%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKIS LQR PI+KISKISLTRCYSTAHSR
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISCLQRLPIDKISKISLTRCYSTAHSR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN
Sbjct: 61  VVHDLLAEVEKEKKREREMRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKID
Sbjct: 121 AYEEPSDSDSDEDDERFSTESVRKRFQNFQRKFERHKELLKNFTDADNIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYG
Sbjct: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNDPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
           AIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 AIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK
Sbjct: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394

[Close]

BLAST of Cucsat.G19113.T5 vs. ExPASy TrEMBL
Match: A0A6J1FXC7 (DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC111448419 PE=3 SV=1)

HSP 1 Score: 651 bits (1679), Expect = 7.02e-232
Identity = 334/394 (84.77%), Postives = 365/394 (92.64%), Query Frame = 0


Query: 1   MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSR 60
           MVNKSQAFSWSRLLLNQVVHQN IKTPLHISR+IS LQRFP E+  K   TRCYSTA +R
Sbjct: 1   MVNKSQAFSWSRLLLNQVVHQNPIKTPLHISRQISPLQRFPFEETPKTPATRCYSTASAR 60

Query: 61  VVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLN 120
           VV DLLAEVEKEK+REREQR RAGLDTKDID+ED EDYMGVGPLIEKL+K+  + TG+LN
Sbjct: 61  VVQDLLAEVEKEKQREREQRRRAGLDTKDIDDEDREDYMGVGPLIEKLEKEKLKDTGNLN 120

Query: 121 AYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKID 180
           AYEE +DSDSD DDERFS ESV+KRF+ F++KF+RH+ELLK+FT+ DNIDDAFKWMSKID
Sbjct: 121 AYEEATDSDSDEDDERFSSESVKKRFDEFERKFKRHEELLKHFTETDNIDDAFKWMSKID 180

Query: 181 RFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYG 240
           +FEQKHF+LRPEYRVIGELMNRLK+A+GKEKF+LQQKLNRAMR+VEWKEAYDPNNPANYG
Sbjct: 181 KFEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLVEWKEAYDPNNPANYG 240

Query: 241 AIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300
            IQ  Q GPSV+L E+S F K+KQ IQG+DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Sbjct: 241 VIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDDILLEKLNAIDKKLEE 300

Query: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360
           KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG
Sbjct: 301 KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG 360

Query: 361 KVVKYTAILACGNYHGIVGYATAKGPAVPIALQK 394
           +VVKY+A+LACGNYHGIVGYA AKGPAVPIALQK
Sbjct: 361 QVVKYSALLACGNYHGIVGYAKAKGPAVPIALQK 394

The following BLAST results are available for this feature:

BLAST of Cucsat.G19113.T5 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10128	2.8e-06	36.36	30S ribosomal protein S5 OS=Mycoplasma capricolum subsp. capricolum (strain Cali...	[more]
Q50301	1.4e-05	30.00	30S ribosomal protein S5 OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) OX=...	[more]
B2I8I6	1.4e-05	37.33	30S ribosomal protein S5 OS=Xylella fastidiosa (strain M23) OX=405441 GN=rpsE PE...	[more]
B0U5L6	1.4e-05	37.33	30S ribosomal protein S5 OS=Xylella fastidiosa (strain M12) OX=405440 GN=rpsE PE...	[more]
Q87E65	1.4e-05	37.33	30S ribosomal protein S5 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) ...	[more]

BLAST of Cucsat.G19113.T5 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151847.1	6.03e-275	100.00	probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus] >KAE8652337.1...	[more]
XP_008462792.1	1.75e-267	97.46	PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis melo] >TYK0...	[more]
KAA0066311.1	2.82e-267	97.46	putative 37S ribosomal protein S5 [Cucumis melo var. makuwa]	[more]
KAG6571211.1	3.08e-233	85.28	hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038902106.1	4.37e-233	86.04	uncharacterized protein LOC120088744 [Benincasa hispida] >XP_038902107.1 unchara...	[more]

BLAST of Cucsat.G19113.T5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNF1	1.17e-276	100.00	S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431220 PE=...	[more]
A0A5D3BRU3	8.45e-268	97.46	Putative 37S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CJC3	8.45e-268	97.46	probable 37S ribosomal protein S5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7VKZ9	1.36e-267	97.46	Putative 37S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1FXC7	7.02e-232	84.77	DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 288..308
None	No IPR available	COILS	Coil	Coil	coord: 313..336
None	No IPR available	GENE3D	3.30.160.20		coord: 293..397 e-value: 6.6E-17 score: 63.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..137
None	No IPR available	PANTHER	PTHR13718:SF61	28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL	coord: 71..394
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 338..394
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 343..394 e-value: 3.7E-13 score: 49.3
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 343..400 score: 14.766771
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 71..394

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G19113	Cucsat.G19113	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19113.T5.E1	Cucsat.G19113.T5.E1	exon
Cucsat.G19113.T5.E2	Cucsat.G19113.T5.E2	exon
Cucsat.G19113.T5.E3	Cucsat.G19113.T5.E3	exon
Cucsat.G19113.T5.E4	Cucsat.G19113.T5.E4	exon
Cucsat.G19113.T5.E5	Cucsat.G19113.T5.E5	exon
Cucsat.G19113.T5.E6	Cucsat.G19113.T5.E6	exon
Cucsat.G19113.T5.E7	Cucsat.G19113.T5.E7	exon
Cucsat.G19113.T5.E8	Cucsat.G19113.T5.E8	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19113.T5.C1	Cucsat.G19113.T5.C1	CDS
Cucsat.G19113.T5.C2	Cucsat.G19113.T5.C2	CDS
Cucsat.G19113.T5.C3	Cucsat.G19113.T5.C3	CDS
Cucsat.G19113.T5.C4	Cucsat.G19113.T5.C4	CDS
Cucsat.G19113.T5.C5	Cucsat.G19113.T5.C5	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19113.T5	Cucsat.G19113.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004386	helicase activity