Cucsat.G19113 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G19113
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ribosomal protein S5 family protein
Location	ctg35: 684043 .. 693348 (+)
RNA-Seq Expression	Cucsat.G19113
Synteny	Cucsat.G19113

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCCCATTTCAAATATTGGAAAGACTCGGCCCCAATGCTTACCGAGTAGACCTCTCAGCAAACATGAGAATCAACCCATCTTTAATGTTGCCGACTTAAAAAAAATGGTTGGAATATTTATTTGGTTAGCAAACCAAAAATTGTTAGATACCGATTTTATACAAGCATAAGGATTTCATTAGACCTTTGTAAAAGAGAGAAAATCCTACACTCGTCTCCTCGATTCTTTCCCTATTCATATTTCTTTTACCGTCCCTTTTCTTCCTTCTCTTCTTTACCCCAGCCGCACGCCCCATCGGCACCTTCCTTCTCTCCTACCGGTATCTCCATTGCTTCCCAACGCCACCACACTCATCAACCTTCCATCCCCCCGCTTCCCATCTCTCTCTCTCTCTCTCAACTACTTCCGTCGCCGGCCGCCGGCACCCACCACACCCATAACTTAATGTCGTTTTCTAGGAAAAGAATTTGATTGAATTGAATGGTTTGAACATTTTACGCATGTGAGACGGTTTAGTTGTGTGATTGAAGTTTAGGCTCAAAGAAATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTTCACCAAAACCTCATCAAAACCCCACTTCATATTTCCCGTAAAATCTCCGGTCTCCAACGCTTCCCTATCGAGAAAATTTCGAAGATTTCGTTGACGCGGTGTTACTCCACTGCTCATTCTAGAGTTGTGCATGATCTTCTCGCTGAGGTGGAGAAGGAGAAGAAGAGAGAAAGGGAGCAGAGGATAAGGGCTGGCCTTGATACCAAGGATATTGACAATGAAGATGAAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGACAAGAAAAATTCAAGGGTCACTGGGGACTTGAACGCCTATGAAGAACCCTCTGATTCTGATAGTGATGCAGACGATGAAAGGTTTAGTAGAGAATCTGTCAGAAAGAGGTTTGAAAACTTTCAGAAGAAATTCGAGAGGCACAAGGAATTGCTGAAGAACTTCACTGATGCTGGTATGACCAATTATGGAGAGTGCCTTCATTTCCTACTTGTTTTAATTTCTTAACATTTGGAGTAGTTTTTGTTAATGCATATTGGCTCGAATTTTGGAGGACTCCGAATATAGTGGCATCTTTTAACTTCTGTTTTTCTTAACTTTTGTTGTTTTTTTTCGTTATTTGATACTTTGTTGCAATGGACTAATATGCGGGTTAAACTTTTAGTAACGTTCTCCATGAATGCAACGCAACATGAACAAATGTATTGAAATGTTGCAAGAGTCCAGCAGTTGTTGATGGCGTTCTTTGATCTTGACATTGGAATATGTTCTCTCTTTCTTTCTATCTTAACCAAAAGAAAATTCATTTGAACATTTTTTTCGTTTGTTCAACATTTTGGACTTGTGTTAAAATCTTCCAACATCGCCAACATGTTTTTGACAGATAACATTGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGCAAAAACACTTCCAGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTAGCGGAGGGAAAGGAAAAGTTCATGCTTCAGCAGAAATTAAATAGGGCTATGCGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCCAACTATGGTGCCATTCAACGTAGACAAGGAGGTCCATCAGTTAATCTCGAGGAACGATCAGAATTTGCAAAACAGAAGCAAACCATACAGGGGATTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTCAATGCTATAGATAAGAAACTCGAAGAGAAGCTAGCAGAGCTGGACCATACCTTTGGAAAGAAAGGGAAGGTTCTAGAAGAGGAAATCCGAGATCTTGCAGAGGAGAGAAACTCGTTAACTGAGAAGAAGAGAAGGCCACTTTATCGAAAAGTATGTTACTCCTCATCTTGTTTGTGTGCACCTTTTACTTTGTTGTCTTCTGTCTTCTTTTGGCAGTTGATAGTTTCCAACTAAGTTTGCAGATTCAATAGTTAATTGTTTATTTTCTTGATCATCAAATTTCAATGTTGTGCTCGAGGATTCAAAGGGCTAAGTTGAGGCTTCCTCTCTTACTTTTGCTTATTCTTAGGACCTGACAAATTTGTTAGAAATTAGGCATGAGCTTTTCTCTGTTTCCTTAAATCTTTATGTTGTGTATATATATGTATATATTTGGCTTTTTGCTTAGTTTAAAAGCAAAGTATTTGTAACTATAGTTCTGAAAAGAGCTTTTTTGTTTCTGATTTGCGGCCTAGTGCATTTTTTTTTACAATGTTCCTATACCATGTTTTGGAAAAGACAAGGAAAAAAAAGAACCATATTTTTTGGTATCAAATACAATTTAATACTGAAACTGATTGAGTTAAGTGTCTTAAATCACCAATTCAACCCAAAAGCTTAACTGATAGGGTGAAAAGCAAATTTAATATAATATCTAACAAAATGTAACATTTCATTATTTGTGATTAGATTATTGCTCAACAATTTTATAATTGGGTTCATGAAAAACTCTTTTACAATTGGGTTTATTAACACATATACAAAGTATACTTTTACAGTGATTTTTCTTGGAAGTACTATTGATCTATAAATGTAGGTAGTTTTATCAGACAGGCTGAATGGATGCAATTGTGGTGCATTTTATTGTCTGTAATGTGGGCGGAGTTCACAATTTTAATTGTTATTTTCTTGAAAGGAGCATACAATATTATGTTCCTTGTCTTATATATCTTTATACTTGTTTTATAAATTATGATTATAGTTTTGGAAATGTTAATGTTTTTCTTTGGGCGTTATTGACAAGTTCTTTTTATAATTATTCATTAGGTCATATTTTCTAGATTAGAGACCCTTCTTCTTGGGTGGTGCTTTTGTGGGCTTGAGTTTTTTGGATCCCTTAGTATTTTTTAGTTTACCTTTTTGTCAATAAAGAAAAGAAAGTTAATATTTGAATTTATTAATAAAAAATATTAACTTTGATTGTTACATAATGATGGCAGGGCTTTGATGTGAAATTAATTGATGTGAACAGAACATGTAAAGTTACAAAGGTATGCAAAACCACCCTTCTAAATATCCTATTCAAATAAATAGTGTTTGATGATTGTACACTTTGATCTAGGGTGGAAAAGTTGTCAAATACACTGCTATCTTGGCTTGTGGGAACTACCATGGCATTGTTGGTTATGCAACAGCCAAAGGACCGGCAGTCCCGATTGCTTTACAAAAGGCATGTTGCTTGCCCTATTCAGTAGATTCCTTTTCTTCCTCATTTAGTTTTATTGAAATTTGAGAATTTAATCAAATGCTTAAAGTTCGAGTTCTTGAATGCCACAGAGTGATTTGATTTTTAAGGTGCTCAGTGAGTGTTTTGCTTGAGTTGCTTTGAAAATATTTAGCTAGGTTTTATCTGAAATCAAATAGTTAAGGGATGGAATCATGGAAGCATCTGGGTTGATCTATGTAAACGAGATAGAAATTGAATATGTGGTAATGCGAAAGTGAGAGAAACAAAAATTTATAGAAATATTTTTATATAATCTCAATTATTGTTATTATTGTTTTTAAAATGAAGCAGAAACTGTTCATTGATAGATGAAATGGGCGATAAAAGAAGTTAGTTCGAATAACATTTACAAAAGATTGTGGGGAGGAGAAGGGAGTTTATCAAGGGCCTCGAGAAATGGGAGAGTTCCACTGAAAAATGAATTTGAAGTCTTAATGAGGAGGACACTAGTTTGAGACAAAGACAAAGGTTAAGTGGGCTTAAGAGGAGGATGAAAGTTCTTTTTTCCATAGTATCACAAGAGGAGAAAAACGAACTTGATTGAGTTCTTGGTGCAGTGGTTGTGGAGGAAAGGGTGATTGAGGACATTTTTTTCATTTTTCTCGACTGAGCCCCCTCCTAGTGTGTTCCTAGACCTGTCCACAATGGTTTAGATTGGTGCCCCATCTTAGAAAGGGAGAGAGAAGAGTTGGAAGCTTATTTCACATTATAGGAAATTCAGAAGGTAGTATTTGGCTTTAGGAATAAATCACTTGGTCGGCCCACTGACCACAACTTGGAGATGGGACACAGCTTCATACTTTTTCTCAGTAAGTTATTATCTTTTACTTCCATACCTAACTCTAATCAATTTTCTCTCTTTCAAAAAGACTTAACAGTTACCATTTAACCAAAGAGCAAACTGAATTCATCACTGGGACTAAATTGTCGATCTTTGCTGACCTAATCAATTTGACTCAAAGATCTCTCCATCAACCCTCTCGACCCCTTCCGTGGCTCCCCTGATACTCTTTTCTGTTCCTCCTCTCACTTGTTATCACTCTACAAAACACAATGGTATGGGTGACCTTAATCATTAATGGAAGAAAAGTGCACAAACCTTGACGATGAAACTGATCCAGAAAAAGTATCTTTAGCCTTTTCTTAGAGTACTAATGTTATATTCTTTCTTGGCCAATTGAAAACAAATTATGTAAAGGACATTAAGGAATTAGATGGACTTGTTTCATCTATATGTTAAGTCTTTTCTAAAACCAGGTAAGGATGGGTTGACCTCCATCGATCATCGTCTCACAGAATTTACGAGGTTGGGGTGCTTGGGAAAAGCATGTACGTGTGGAAAAACTAAGCTTCAGTTTTTAAACCATATCCTTGTTTTGGATATCTTACAAAAACTAAGCTTCAGTTTGTTGATAGGGTCACCATTAGTTCGCTCCAAAGCTATAGGCGCATTGGTTAGACTACTACTGAAGGTATGGGTGCCTTGGGAAGTATTGTCATGATTTGAAACGACTCTTCCCACACTTTAAGGGAGGTCATTAAAAGGTGTTATCTCCCTTACCATTTACTTCTCCCTTGCTCCTTTACCTCTGTTTTTTTTTTTTTTTTTGATAGAAAGAACAACTTTCATGTGAAAAATGAAAGACTACTAGCGCATACAAAAAAATAAAAGTAAAAGCTAGTCAACCAAAACTCCTGACTAAAACAAAGGGGTCCAACTGAATAAATGTTACCAATAGAATAATTACAAAAGTTATTCAAAATCGAAGTCCAAAAGAATATATAAATTCTAATCAAAAACCAAACCTCACCATGATCCCTTTCCTTACCATGAAACACCTAATCGTTCCTTTCCCCCCAAATGTCCCACAAAATGGCACACACTCTTGCAAGCCATTAAAAACTCCCTTTCTATCTAAAGGGCAATGGAAGAGGAACTCCTCGACTGTTGCACAAACACCCTGATGGCTAGCACCGAACTCGTATAAAAGATAAAAAATAAAGCTCCACACATCCGTACATACCGGCAATCCCAAGAAAAATAATTAAGGTTTTCCTTCGACTTCTGACAAAGCATGCAGAAAAAAAGCCCAACAAGCGAAGTCCTCCTAACAAGCCTCTCAACGGTATTAACCCAACCTAGCAAAACTTGCCACTTGATTTTCTTAGGTACCTGTTAGGATACTTTTATCAAGATTTTTTTTGCTCACTCTTTTTTAATTGAAATATTTCATCAAGACAAGGATGAAAGAATTCAAGGGCGTACGAAAAACTCTGCTAAACCCCTAAAGAAAGTGTATTACCGCTGCTTTCTTTGGCTCAGCTTTTGTAGGGCTCTCCTCTAGTCTCTTTGGAGTGAAAGGAACGCACCCACCTTGGGGGACAAGGAAAATTATTTTGATAATTTTGTTAAAGATTTCTATTTCTAAAAGAGCATAGCTGACAGCATGGTTGAAATTGAATTTTATTGGAGATTTTTATGAGATCCTGAAATCATAGGCCAAGTGTTTTGCATGATCTTGGAACAGGCATGTGCAATCATCAATCAAGCCTAAAGCTAGGATAGCCAGAGATCAAAACTCTTGAGTCTCCATGGGAATCAATTAAAACAACCCTGGAAAGAATTAAAGGAACTTTATTGTTCGACGAAAGGGTCAACTTGGAAGGGTACATAATGAGTTTAACTAACTCTCTCTTTGAATTGATTTTCTTCTTGCACAAGTAGGAGAGAATCACGTTTGTGATTGTTAAACGGATATTTATGTGTTGAGTCCCCCATGATAACTATATTGTTTAATCAAATTCTTATTGCAAATTGGATTAAAACGATGTTCTTCTATGATCAATCAGCTACCTTTTTTTTTCCTATGAGAGATCTAAGTAGAAAAATATTCTATACAATCAGTGGCTTGAGGAGAAGTTGGGATTCATGATTATGAAGATTTTGTTACTTGATGTCTTGGCGGTATAAACACAATATGATATTGTTAGGATCCCAAGTATAAGAACACAACATAAAATGAAAAGATAACTGTATTGCAATATCATTGACCTTTGGAATGGACCATCTCTTTCCTCAAGTCCCACAAATGAACAATGCACCAAAATGACCCTCTCAACATACCCAACTCCTCACACCGTCACACAATCCCTGAATAATAAGGGACATAGAGAACTCTAATCTGGCATGGAGCTTCAAATTGGGAAATCAACATTCGAGTTTAAGAACTCAAACTCCTATCATAAGATGATTCTTCTATTTTTCTTGGCGGTTTAAGATGGTAGCAGCATTGGGTTTTAGACCAGTTTCTTTATTTACTTTATCTTGGTTCCACTAGTCATTCGTCACCCTCATGTGTTTGTCTTATTTTGTTGGTTAAAAACATCTACACTTCATTTACTACAATGAATATTTCTTCCTCACTCAAACTTCTAGAACTTGAGATGTTGGAAAAGTAAGATATTTTGATTATTAGTATAAACTTTAGAAACTATCAGTCATCGTTAAGAATATATCGAAATTGGATATTTTTTACAAGCTATTTGAAAAATTAATTATTCGCTGGCATTTTTCTCCTGTGATCATGTCTTCCTAACAAGAACAATATCTGAATATAAAAAAAATATAACTATAAAGAAACACAAGATAACCCCAAGTATAAGGCACCTGAAATCTCCCACTTGAGTAGACCTCCAGGTTTAGCTCACATTCTAGAAGAAAATGCAAATGTTGAAATCGAAGCAGTAGACCTGATTTCCCTTTTCGAAGTTGAAGGTTGCAATTTTAGTAATTTCCCTTACTTCTCCCCAATCAAATCAGCAGTAATTCCAAAGGAATTGTTGCCTAACGATTGTGAAGTTGTGTTAGTTTAAGTAAGTCTGTGTAATTCACATGCTCAGAATTTTCACGATCATTTCTTGGAACACAAGAGGCCTAAAAGAAGACCCATCCAAACGTTCTGCTCTTAAGAAGTTTATAAAAAATCATCACCAGGACAAGAATCAAAAATGGAAATTCTGGAATTAAATTTCATTAAAACAATATGGAGCTTATGGATATAGGTTGGGAATCAATGGATTCATTTGGCGCATCTGGAGGCATCCTTACTTTATGGGATATCCGTAAAATCACTCTGATGGGAAACCACAACAGGGCGATATTCCCTCTCAAGGAGGATATCCTAGGCAGAAATTGTTTTGGCAGCCAGTTGTAGACAGAGTTTACAAAAAGTCGGATAGATGGAAAAGGTTTAATATATCAAGAGGTGGAAGACAAATTCTTTGCAACTCGGTATTGGTGCCTCCCAACTTACCTACTATCGGTCCATCTTTGCCATTCTAGAAAAGGTTATCTCTAATTTTGAAAAGCTAATTTGAAAATTCTTTTGGGAGGGGAATTCGGGCAGCAAGATCAATCATTTGGCTTCCTGGAAAAGGGTCAAGCCTTCTCAATTAGATGGGGGCTAGGTTTGGGCAGCTTAAAATATAAAAACAAGGCCCTCCTTGCTAAATGGGGTTGGAGGTTTCTGAAAGAAGATTCTGTGTTGTGGTGACAAGTAATTAAAAGTGTCCTTGGCTGCAAAAAAATTGATTGGCGGACTCTAAACAAATCAGGAAACAACCTTAAAAGTCTGTGGATTGGTATCTCTAGAGATCGGAAAAGGGTGGTTGAGTTGGCAACGTTTAAACCAGGGAACAGAAGGAGAGTAGCTTTCTGAACAGATTCATGGGTTGGCCATCTCCCTCTTAAATCTCAGTTTCCAAATCTATTCAGATTAACTCAGCTCCCCAATGATTCAGTTGCTGCCCATTCGGATTATGTCACTAATTCTTGGTCATTAGTCTTTCGTGGATTGCTAAAAGATGAAATCCAAGATTTTCAAAGGCTATTAGCACTCATATCTCTGAAAGGTCTAACGGATTTGGATGCTAAGAGAGTTTGGTCATTAGAATACTCCGGTCATTTTTCAATTAAGTCCCTTTCGAAGCACCTCTCTCCCTCTTCTCATTTGGAAAAAGACTGCTTTAAAGCACTTTGGAAAACCAGCAGTCCAAGGAGAATAAGTGTCCTGGTTTGGATTGTGGCAGTTGATTCTCTAAATTGTTCCGAGACTATGCAAAGGACGCTTCCCAATATGTTGTTACCATCAGTGTGCCCTCTTATTCATTTTCTGTCCCTTTTCATCTAATTGCTGATTTAGCATATTTTCAATGCTTAAAACAGCTTGGGTCTTTGATGGTTTGCTAAGTACCAGTGTGTTCCAATCATTGAGGGGGCCTTACCTATCAAAAAAACCTTTTCATATTTGGGTTAATTTGATAAAAGCGCTTCTAATTGAGATTTGGTTTGAACATAACCAACGCATCTTCCATTATAAAAAAAGGATTTGGGTTGACATCGTAGACACTTCTAAAAGAAACGCTGCAGTATATCATTCTGCAAAATAACCTCCCCTCACTCAGTTGCCCTCCCTCTATTTATAACAAGTATAACGACCCTTATTCAATGACTACCAGTATCTCACTATCTATGTGATTACCTTTATGCTCCTTAACCAACACATACTAAATATCTAGTACTTATCCTTCAGAAAGAAATCCAGTTACTTGGAAGGAGCATACTAACAGTTTACAAGTACATGTTATCTCTCTATCTAAATCAAACCAGTGCATAGTACTTATAATTTCAGCTTACATTGTTAATGTGTGTTTGATGCTATTGAGCAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGACATGAGGAGCACACAATTGCACATGCAGTTCAGACGGCATACAAGAAAACAAAGGTATTCAACCATCTCTAATGTTCTTCTTTCTGCATCAAAAGTTCCCTCAACCTCTAATCATGGATTGAGGGGTCCTGCCCCCTCCAGCATCTGGAAAACACCAGAGGAAAAAGTAAGGACACTAAATCCTTTCGCAGTATTTACAATTTGGAGGCCTAACAGATAAATACCACACCGGTGGATGTGGCTGATGGGTTGCACCCTGACAACTTGTACCGACTGCTGGACAACAATCCTCTCTTTTTCTAGTTTTAGATTATCCATATGGAGTCCTTCCAACAAAAATTACTTTTTTTTGCTTGTATTTCATTTGATGGAAACTAATGATTCCTTTCTTAAATCTCCTTGTTTTTGTTGTCTGTTAAGATATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTAATTTATTCCTGTCCTCTATTATGGAGGTTAACGTAAAATGTATTTTTTCTTCGTTCCTCCACTGCTTCTAACTTGAGTTCAAATAACAGGTTATTGGCTCAAGAAACCCCCTGAACACTATGAGGGCCCTCTTCAAAGCTCTAAATGCAGTAAGTAGCCATTGAATTAAGATTGTTATTTTCCGATTCCACAAGGGACATTCTAGTTACGTTCTGATCATATGTCGTGTTTTCCAGATTGAGACTCCGAAGGATATTCAAGAAAAGTTCGGACGGACTGTTGTTGAGAAGTACTTGCTATGATAGGAGGTTTTCTTTTTCCTCTTTCCTTTTTGTTTCTAATTCAAAAGTTGCCGATTCTCAAGTAGATGTACAAAAAGGAATTTTGGTATTTAAGTTAAGACATCGAGGCTGTAACTTCTGTTAAAGGTTTGATTATCTCCCTTCTAAAACCCAAGGGCATCATTTTTTAACCTGTAGGACAGATTATGTTCAAGGTGGTCAATCTCTTACATCAATAATCAAGAGAACATCATTTTCAGCATGCCTTTGTTATTATATCCCCCTTCTTTGTGATAAGAGTGTATGTCGGACGGATTTTCATGAAATATTTGAAAATCAAACCAAACCGAATCGAAGCTAATTGTATGCGGTTTGGTGTGGTTTGTGTTATGTTGAAACTGCTTCTTATGCAGTTCGGTTCGGTTTAATGTTTTAAACCGATTCTAAAAT

Coding sequence (CDS)

ATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTTCACCAAAACCTCATCAAAACCCCACTTCATATTTCCCGTAAAATCTCCGGTCTCCAACGCTTCCCTATCGAGAAAATTTCGAAGATTTCGTTGACGCGGTGTTACTCCACTGCTCATTCTAGAGTTGTGCATGATCTTCTCGCTGAGGTGGAGAAGGAGAAGAAGAGAGAAAGGGAGCAGAGGATAAGGGCTGGCCTTGATACCAAGGATATTGACAATGAAGATGAAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGACAAGAAAAATTCAAGGGTCACTGGGGACTTGAACGCCTATGAAGAACCCTCTGATTCTGATAGTGATGCAGACGATGAAAGGTTTAGTAGAGAATCTGTCAGAAAGAGGTTTGAAAACTTTCAGAAGAAATTCGAGAGGCACAAGGAATTGCTGAAGAACTTCACTGATGCTGATAACATTGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGCAAAAACACTTCCAGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTAGCGGAGGGAAAGGAAAAGTTCATGCTTCAGCAGAAATTAAATAGGGCTATGCGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCCAACTATGGTGCCATTCAACGTAGACAAGGAGGTCCATCAGTTAATCTCGAGGAACGATCAGAATTTGCAAAACAGAAGCAAACCATACAGGGGATTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTCAATGCTATAGATAAGAAACTCGAAGAGAAGCTAGCAGAGCTGGACCATACCTTTGGAAAGAAAGGGAAGGTTCTAGAAGAGGAAATCCGAGATCTTGCAGAGGAGAGAAACTCGTTAACTGAGAAGAAGAGAAGGCCACTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGAACATGTAAAGTTACAAAGGGTGGAAAAGTTGTCAAATACACTGCTATCTTGGCTTGTGGGAACTACCATGGCATTGTTGGTTATGCAACAGCCAAAGGACCGGCAGTCCCGATTGCTTTACAAAAGGCATATGAGAAATGTTTCCAAAATCTTCATTATGTGGAACGACATGAGGAGCACACAATTGCACATGCAGTTCAGACGGCATACAAGAAAACAAAGATATATCTTTGGCCAGCATCAACTACCACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTCTGAATCTGGCTGGTTTTAAAAACGTCAAATCTAAGGTTATTGGCTCAAGAAACCCCCTGAACACTATGAGGGCCCTCTTCAAAGCTCTAAATGCAATTGAGACTCCGAAGGATATTCAAGAAAAGTTCGGACGGACTGTTGTTGAGAAGTACTTGCTATGA

Protein sequence

MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISRKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL

Homology

[Close]

BLAST of Cucsat.G19113 vs. ExPASy Swiss-Prot
Match: Q493J1 (30S ribosomal protein S5 OS=Blochmannia pennsylvanicus (strain BPEN) OX=291272 GN=rpsE PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 6.7e-25
Identity = 61/151 (40.40%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 243
           KLI VNR  K  KGG+V  +TA+   G+ +G VG+   K   VP A+QK+ EK  +N+  
Sbjct: 14  KLITVNRVSKTVKGGRVFSFTALTVVGDANGRVGFGYGKAREVPSAIQKSMEKARRNMVI 73

Query: 244 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 303
           +  + + T+ HAV+  Y  ++IY+ PAS  TG+ AG T++ +L + G  NV +K  GS N
Sbjct: 74  ISLY-KGTLQHAVKGVYTGSRIYMQPASEGTGIIAGTTMRAILEVVGIHNVLAKAYGSTN 133

Query: 304 PLNTMRALFKALNAIETPKDIQEKFGRTVVE 335
           P+N +RA   AL ++++P+ I EK G+++ E
Sbjct: 134 PINIVRATINALQSMKSPEMIAEKRGKSISE 163

[Close]

BLAST of Cucsat.G19113 vs. ExPASy Swiss-Prot
Match: Q1IFU9 (30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rpsE PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 6.7e-25
Identity = 62/156 (39.74%), Postives = 96/156 (61.54%), Query Frame = 0


Query: 179 KGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCF 238
           +G+  KL+ VNR  K  KGG++  +TA+   G+  G VG+   K   VP A+QKA E   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 239 QNLHYVERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV 298
           +N+  V+  +  T+ +A + A+  +K+Y+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70  RNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 299 IGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVE 335
            GS NP+N + A FK L A+++P+ I  K G+TV E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGKTVEE 164

[Close]

BLAST of Cucsat.G19113 vs. ExPASy Swiss-Prot
Match: Q4K550 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=rpsE PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.7e-25
Identity = 61/156 (39.10%), Postives = 98/156 (62.82%), Query Frame = 0


Query: 179 KGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCF 238
           +G+  KL+ VNR  K  KGG++  +TA+   G+  G VG+   K   VP A+QKA E   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 239 QNLHYVERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV 298
           +N+  V+ +   T+ +A+++A+  +K+Y+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70  RNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 299 IGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVE 335
            GS NP+N + A FK L A+++P+ I  K G++V E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVQE 164

[Close]

BLAST of Cucsat.G19113 vs. ExPASy Swiss-Prot
Match: C3K2V9 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=rpsE PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.7e-25
Identity = 62/156 (39.74%), Postives = 97/156 (62.18%), Query Frame = 0


Query: 179 KGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCF 238
           +G+  KL+ VNR  K  KGG++  +TA+   G+  G VG+   K   VP A+QKA E   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 239 QNLHYVERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV 298
           +N+  V+ +   T+ +A+++A+  +K+Y+ PAS  TG+ AG  ++ VL +AG +NV +K 
Sbjct: 70  RNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKC 129

Query: 299 IGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVE 335
            GS NP+N + A FK L A+++P+ I  K G TV E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGLTVKE 164

[Close]

BLAST of Cucsat.G19113 vs. ExPASy Swiss-Prot
Match: A4VHP7 (30S ribosomal protein S5 OS=Pseudomonas stutzeri (strain A1501) OX=379731 GN=rpsE PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.5e-24
Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 179 KGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCF 238
           +G+  KL+ VNR  K  KGG++  +TA+   G+  G VG+   K   VP A+QKA E   
Sbjct: 10  EGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAAR 69

Query: 239 QNLHYVERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV 298
           +N+  V+ +   T+ +A + A+  +KIY+ PAS  TG+ AG  ++ +L +AG  NV +K 
Sbjct: 70  RNMIQVDLNGT-TLQYATKAAHGASKIYMQPASEGTGVIAGGAMRAILEVAGVHNVLAKC 129

Query: 299 IGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVE 335
            GS NP+N + A FK L A+++P+ I  K G++V E
Sbjct: 130 YGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVEE 164

[Close]

BLAST of Cucsat.G19113 vs. NCBI nr
Match: XP_004151847.1 (probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus] >KAE8652337.1 hypothetical protein Csa_022447 [Cucumis sativus])

HSP 1 Score: 658 bits (1697), Expect = 2.22e-235
Identity = 334/335 (99.70%), Postives = 334/335 (99.70%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
            DNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV
Sbjct: 166 ADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 243
           KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY
Sbjct: 346 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 405

Query: 244 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 303
           VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN
Sbjct: 406 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 465

Query: 304 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Cucsat.G19113 vs. NCBI nr
Match: XP_008462792.1 (PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis melo] >TYK00966.1 putative 37S ribosomal protein S5 [Cucumis melo var. makuwa])

HSP 1 Score: 654 bits (1686), Expect = 1.05e-233
Identity = 330/335 (98.51%), Postives = 334/335 (99.70%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
            DNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV
Sbjct: 166 ADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNDPANYGAIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 243
           KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY
Sbjct: 346 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 405

Query: 244 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 303
           VERHEEHTIAHAVQTAYKKTK+YLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV+GSRN
Sbjct: 406 VERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRN 465

Query: 304 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Cucsat.G19113 vs. NCBI nr
Match: KAA0066311.1 (putative 37S ribosomal protein S5 [Cucumis melo var. makuwa])

HSP 1 Score: 644 bits (1662), Expect = 7.53e-230
Identity = 330/348 (94.83%), Postives = 334/348 (95.98%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
            DNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV
Sbjct: 166 ADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNDPANYGAIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA---------- 243
           KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA          
Sbjct: 346 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLYYCRFLF 405

Query: 244 ---YEKCFQNLHYVERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAG 303
              YEKCFQNLHYVERHEEHTIAHAVQTAYKKTK+YLWPASTTTGMKAGKTVQTVLNLAG
Sbjct: 406 FLAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAG 465

Query: 304 FKNVKSKVIGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           FKNVKSKV+GSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 FKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 513

[Close]

BLAST of Cucsat.G19113 vs. NCBI nr
Match: XP_038902106.1 (uncharacterized protein LOC120088744 [Benincasa hispida] >XP_038902107.1 uncharacterized protein LOC120088744 [Benincasa hispida] >XP_038902108.1 uncharacterized protein LOC120088744 [Benincasa hispida])

HSP 1 Score: 620 bits (1599), Expect = 1.82e-220
Identity = 312/335 (93.13%), Postives = 324/335 (96.72%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
           T+NIDDAFKWMSKIDRFEQKHF+LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMRIV
Sbjct: 166 TENIDDAFKWMSKIDRFEQKHFRLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRIV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPNNPANYG IQ  Q GPS +L E+S F K++QTIQ  DDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNNPANYGVIQHGQVGPSDDLTEQSGFEKERQTIQRADDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 243
           KLIDVNRTCKVTKGGKVVKYTA+LACGNYHGIVGYATAKGPA+PIALQKAYEKCFQNLHY
Sbjct: 346 KLIDVNRTCKVTKGGKVVKYTALLACGNYHGIVGYATAKGPAIPIALQKAYEKCFQNLHY 405

Query: 244 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 303
           VERHEEHTIAHAVQTAYKKTK+YLWPA TTTGMKAGKTVQTVLNLAGFKNVKSKV+GSRN
Sbjct: 406 VERHEEHTIAHAVQTAYKKTKVYLWPAPTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRN 465

Query: 304 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           PLNT+RALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 PLNTLRALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Cucsat.G19113 vs. NCBI nr
Match: XP_023512942.1 (uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943.1 uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 617 bits (1590), Expect = 4.26e-219
Identity = 309/335 (92.24%), Postives = 323/335 (96.42%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
           TDNIDDAFKWMSKID+FEQKHF LRPEYRVIGELMNRLKVA+GKEKF+LQQKLNRAMR+V
Sbjct: 166 TDNIDDAFKWMSKIDKFEQKHFWLRPEYRVIGELMNRLKVADGKEKFILQQKLNRAMRLV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPNNPANYG IQ  Q GPSV+L E+S F K+KQ IQG+DDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 243
           KLIDVNRTCKVTKGG+VVKYTA+LACGNYHGIVGYA AKGPAVPIALQKAYEKCFQNLHY
Sbjct: 346 KLIDVNRTCKVTKGGQVVKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHY 405

Query: 244 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 303
           VERHEEHTIAHAVQT YKKTK+YLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV+GSRN
Sbjct: 406 VERHEEHTIAHAVQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRN 465

Query: 304 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           P NT++ALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 PHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Cucsat.G19113 vs. ExPASy TrEMBL
Match: A0A5D3BRU3 (Putative 37S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001480 PE=3 SV=1)

HSP 1 Score: 654 bits (1686), Expect = 5.08e-234
Identity = 330/335 (98.51%), Postives = 334/335 (99.70%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
            DNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV
Sbjct: 166 ADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNDPANYGAIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 243
           KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY
Sbjct: 346 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 405

Query: 244 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 303
           VERHEEHTIAHAVQTAYKKTK+YLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV+GSRN
Sbjct: 406 VERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRN 465

Query: 304 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Cucsat.G19113 vs. ExPASy TrEMBL
Match: A0A1S3CJC3 (probable 37S ribosomal protein S5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501082 PE=3 SV=1)

HSP 1 Score: 654 bits (1686), Expect = 5.08e-234
Identity = 330/335 (98.51%), Postives = 334/335 (99.70%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
            DNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV
Sbjct: 166 ADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNDPANYGAIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 243
           KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY
Sbjct: 346 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 405

Query: 244 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 303
           VERHEEHTIAHAVQTAYKKTK+YLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV+GSRN
Sbjct: 406 VERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVVGSRN 465

Query: 304 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Cucsat.G19113 vs. ExPASy TrEMBL
Match: A0A5A7VKZ9 (Putative 37S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003700 PE=3 SV=1)

HSP 1 Score: 644 bits (1662), Expect = 3.64e-230
Identity = 330/348 (94.83%), Postives = 334/348 (95.98%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
            DNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV
Sbjct: 166 ADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNDPANYGAIQRRQGGPSVNLEEQSEFAKQKQTIQGIDDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA---------- 243
           KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA          
Sbjct: 346 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLYYCRFLF 405

Query: 244 ---YEKCFQNLHYVERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAG 303
              YEKCFQNLHYVERHEEHTIAHAVQTAYKKTK+YLWPASTTTGMKAGKTVQTVLNLAG
Sbjct: 406 FLAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKVYLWPASTTTGMKAGKTVQTVLNLAG 465

Query: 304 FKNVKSKVIGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           FKNVKSKV+GSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 FKNVKSKVVGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 513

[Close]

BLAST of Cucsat.G19113 vs. ExPASy TrEMBL
Match: A0A6J1FXC7 (DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC111448419 PE=3 SV=1)

HSP 1 Score: 613 bits (1582), Expect = 3.40e-218
Identity = 306/335 (91.34%), Postives = 324/335 (96.72%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
           TDNIDDAFKWMSKID+FEQKHF+LRPEYRVIGELMNRLK+A+GKEKF+LQQKLNRAMR+V
Sbjct: 166 TDNIDDAFKWMSKIDKFEQKHFRLRPEYRVIGELMNRLKMADGKEKFILQQKLNRAMRLV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPNNPANYG IQ  Q GPSV+L E+S F K+KQ IQG+DDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNNPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 243
           KLIDVNRTCKVTKGG+VVKY+A+LACGNYHGIVGYA AKGPAVPIALQKAYEKCFQNLHY
Sbjct: 346 KLIDVNRTCKVTKGGQVVKYSALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHY 405

Query: 244 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 303
           VERHEEHTIAHAVQT YKKTK+YLWPAST+TGMKAGKTVQTVLNLAGFKNVKSKV+GSRN
Sbjct: 406 VERHEEHTIAHAVQTEYKKTKVYLWPASTSTGMKAGKTVQTVLNLAGFKNVKSKVVGSRN 465

Query: 304 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           P NT++ALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 PHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

[Close]

BLAST of Cucsat.G19113 vs. ExPASy TrEMBL
Match: A0A6J1G7C4 (uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC111451428 PE=3 SV=1)

HSP 1 Score: 612 bits (1577), Expect = 1.96e-217
Identity = 305/335 (91.04%), Postives = 322/335 (96.12%), Query Frame = 0


Query: 4   TDNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIV 63
           TDNI+DAFKWMSKID+FEQKHF LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMR+V
Sbjct: 166 TDNIEDAFKWMSKIDKFEQKHFWLRPEYRVIGELMNRLKVAEGKEKFILQQKLNRAMRLV 225

Query: 64  EWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDD 123
           EWKEAYDPN PANYG IQ  Q GPSV+L E+S F K+KQ IQG+DDDDEEEFDDMKERDD
Sbjct: 226 EWKEAYDPNCPANYGVIQHEQVGPSVDLMEQSGFEKEKQIIQGVDDDDEEEFDDMKERDD 285

Query: 124 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 183
           ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV
Sbjct: 286 ILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDV 345

Query: 184 KLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHY 243
           KLIDVNRTCKVTKGG+V+KYTA+LACGNYHGIVGYA AKGPAVPIALQKAYEKCFQNLHY
Sbjct: 346 KLIDVNRTCKVTKGGQVIKYTALLACGNYHGIVGYAKAKGPAVPIALQKAYEKCFQNLHY 405

Query: 244 VERHEEHTIAHAVQTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRN 303
           VERHEEHTIAHA+QT YKKTK+YLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKV+GSRN
Sbjct: 406 VERHEEHTIAHAIQTEYKKTKVYLWPASTTTGMKAGKTVQTVLNLAGFKNIKSKVVGSRN 465

Query: 304 PLNTMRALFKALNAIETPKDIQEKFGRTVVEKYLL 338
           P NT++ALFKALNAIETPKDIQEKFGRTVVEKYLL
Sbjct: 466 PHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL 500

The following BLAST results are available for this feature:

BLAST of Cucsat.G19113 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q493J1	6.7e-25	40.40	30S ribosomal protein S5 OS=Blochmannia pennsylvanicus (strain BPEN) OX=291272 G...	[more]
Q1IFU9	6.7e-25	39.74	30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) OX=384676 GN=rp...	[more]
Q4K550	8.7e-25	39.10	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL ...	[more]
C3K2V9	8.7e-25	39.74	30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=...	[more]
A4VHP7	2.5e-24	39.10	30S ribosomal protein S5 OS=Pseudomonas stutzeri (strain A1501) OX=379731 GN=rps...	[more]

BLAST of Cucsat.G19113 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151847.1	2.22e-235	99.70	probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus] >KAE8652337.1...	[more]
XP_008462792.1	1.05e-233	98.51	PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis melo] >TYK0...	[more]
KAA0066311.1	7.53e-230	94.83	putative 37S ribosomal protein S5 [Cucumis melo var. makuwa]	[more]
XP_038902106.1	1.82e-220	93.13	uncharacterized protein LOC120088744 [Benincasa hispida] >XP_038902107.1 unchara...	[more]
XP_023512942.1	4.26e-219	92.24	uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo] >XP_023512943....	[more]

BLAST of Cucsat.G19113 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BRU3	5.08e-234	98.51	Putative 37S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CJC3	5.08e-234	98.51	probable 37S ribosomal protein S5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7VKZ9	3.64e-230	94.83	Putative 37S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1FXC7	3.40e-218	91.34	DEAD-box ATP-dependent RNA helicase 42 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1G7C4	1.96e-217	91.04	uncharacterized protein LOC111451428 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 288..308
None	No IPR available	COILS	Coil	Coil	coord: 313..336
None	No IPR available	GENE3D	3.30.160.20		coord: 293..404 e-value: 8.7E-20 score: 73.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..137
None	No IPR available	PANTHER	PTHR13718:SF61	28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL	coord: 73..462
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 338..408
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 421..462 e-value: 1.2E-8 score: 34.3
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 343..407 e-value: 2.8E-18 score: 65.7
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 343..406 score: 16.390774
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 408..467 e-value: 3.5E-14 score: 54.3
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 73..462
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 412..463

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G19113.T1	Cucsat.G19113.T1	mRNA
Cucsat.G19113.T8	Cucsat.G19113.T8	mRNA
Cucsat.G19113.T4	Cucsat.G19113.T4	mRNA
Cucsat.G19113.T3	Cucsat.G19113.T3	mRNA
Cucsat.G19113.T2	Cucsat.G19113.T2	mRNA
Cucsat.G19113.T9	Cucsat.G19113.T9	mRNA
Cucsat.G19113.T6	Cucsat.G19113.T6	mRNA
Cucsat.G19113.T5	Cucsat.G19113.T5	mRNA
Cucsat.G19113.T7	Cucsat.G19113.T7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome