Cucsat.G18476.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G18476.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	ctg3379: 2336344 .. 2337885 (+)
RNA-Seq Expression	Cucsat.G18476.T6
Synteny	Cucsat.G18476.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACTAATACTGAGATAGCAACACATAATAATAAGAAATATTAACTTATAAACTCATCATTAACAACAACGATAACGATAATAATCATATCTTCCTCTCCGTCGAAGCTACCTACAGCCACCGGGGTATGGATATTATCGGAGACGACTACTTGAATCCCTTCGGGAATGAAATCTTCATAGGAGAAGAGCTCGACAGGTCTTTTCTATTTCTTTATTTCTTTATTTCTCTTTTTAAAATGTTGGTGTTAATGAGGGTTTTAGGGATTTTTTTTAAAAAAAACTGGAATTTGACGCCCGTGTTTTTGCTGATTACAGTTGGGGATTGGAAGAGCCGTTTTCGGGTGATTATGATTCGAGTTCGCCGGATGGATCGGCGGCTTCGAAGAACGTAGCATCGGAAAGGAATAGAAGGAGGAAGCTGAACGAGAGGCTTTTTGCACTTCGATCGGTTGTTCCGAATATAAGTAAGGTTAGGTTTAATTGATCAATTCGTTGCTGGTGTTTGATTTTCCATAACTAGGCTAATAGGCTTGGTTTTTTGGATTTTTGGGAATTAATCGATTGACAAATTTTGGATTGAGCAGATGGATAAGGCTTCGATTATAAAAGATGCAATCGATTACATCCATGATTTGCATGACCAAGAGAGGAGGATTCAAGCTGAAATTTACGAGCTCGAATCAGGAAAGTTGAAGAAGATAACAGGGTATGAATTTGACCAGGATCAACTTCCCTTACTGCTAAGATCAAAGAGGAAGAAAACTGAGCAATACTTCAGTTATGATTCTCCTGTTTCAAGAATTTCCCCAATTGAAGTTCTGGATGTAAGTTTCTTTCTCTCTTGCTAAGTTTCATAAATGAATTCGATAAGCGATTTTGAAAGTGAGGGGGATTTTGATGAATTATTGCAGCTTAGTGTAACATACATGGGAGATAGAACAATAGTAGTGAGCATGACCTGCTGCAAAAGAGCAGATTCAATGGTTAAACTCTGTGAAGTTTTTGAGTCACTCAACCTCAAGATCATCACTGCCAATATTACTGCTGTTTCTGGAAGGCTTCTGAAAACTGTCTTCATTGAGGTAACCACACTCTCCTCACCTCTTAGATCATTAATATAATCCATATAAATCAAATTGATTCTGAATTCGAGATACTATTCTCTCAAAGTCAGTCACATTGTGGCGCTCTCACCCAGTAATTTTAAAATTTGAACGGTTTTTGTGCTTGAAGTATTTTGTTTCATTATTCTCTTAAGATGTTCAAATGGGTATTAAATGAATAAGAGAATTCACTTATTAGCAGAATCAAACCAGTTTGTCAATGACTGTAAGAAGAAATGAAATGGAAAATGAATTTTTAAGAGGAAAAATAAGGAACTCGTGGCCTTTGCTAGGAAATGGAAATTGGGTATGTTTCTTTTGTGATTTGTCATGTGCTACCATACGCATAATACCCATAATTGGTCCTCAAAAAAAGGAGGAGATCAATATATGAAGATATATGCTTTTGTCTAAACCTATGGTGGTATCAGTGGAAT

Coding sequence (CDS)

ATGGATATTATCGGAGACGACTACTTGAATCCCTTCGGGAATGAAATCTTCATAGGAGAAGAGCTCGACAGTTGGGGATTGGAAGAGCCGTTTTCGGGTGATTATGATTCGAGTTCGCCGGATGGATCGGCGGCTTCGAAGAACGTAGCATCGGAAAGGAATAGAAGGAGGAAGCTGAACGAGAGGCTTTTTGCACTTCGATCGGTTGTTCCGAATATAAGTAAGATGGATAAGGCTTCGATTATAAAAGATGCAATCGATTACATCCATGATTTGCATGACCAAGAGAGGAGGATTCAAGCTGAAATTTACGAGCTCGAATCAGGAAAGTTGAAGAAGATAACAGGGTATGAATTTGACCAGGATCAACTTCCCTTACTGCTAAGATCAAAGAGGAAGAAAACTGAGCAATACTTCAGTTATGATTCTCCTGTTTCAAGAATTTCCCCAATTGAAGTTCTGGATGTAAGTTTCTTTCTCTCTTGCTAA

Protein sequence

MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVSFFLSC

Homology

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy Swiss-Prot
Match: Q2HIV9 (Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-27
Identity = 79/137 (57.66%), Postives = 97/137 (70.80%), Query Frame = 0


Query: 24  SWGLEEPFSGDYDSSSPDGSA---ASKNVASERNRRRKLNERLFALRSVVPNISKMDKAS 83
           SW LEE  SG YDSSSPDG+A   ASKN+ SERNRR+KLN+RLFALRSVVPNI+KMDKAS
Sbjct: 29  SWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKAS 88

Query: 84  IIKDAIDYIHDLHDQERRIQAEIYELESGKLKKIT-GYEFDQDQLPLLLRSKRKKTEQYF 143
           IIKDAI YI  L  +E++++AEI ELES     ++   +FD+D   LL+    KK +Q  
Sbjct: 89  IIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRD---LLVPVTSKKMKQLD 148

Query: 144 SYDSPVSRISPIEVLDV 157
           S  S     S IEVL++
Sbjct: 149 SGSS----TSLIEVLEL 158

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy Swiss-Prot
Match: Q700E3 (Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.8e-27
Identity = 68/115 (59.13%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGE---ELDSWGLEEPFSGDYDSSSPDGS----AASKNVASER 60
           M+ +  +Y N +   +F      E DSW +EE FSG  +SSSPDG+    A+SKNV SER
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSER 60

Query: 61  NRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELES 109
           NRR+KLN+RLFALRSVVPNISK+DKAS+IKD+IDY+ +L DQE+ ++AEI ELES
Sbjct: 61  NRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELES 115

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy Swiss-Prot
Match: Q0JEB7 (Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15
Identity = 56/131 (42.75%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 20  EELDSWGLEEPFSGDYDSSSPDGS------------------------------------ 79
           EELDS  L      +Y+SSSPDGS                                    
Sbjct: 24  EELDSMYLPTQDDSNYESSSPDGSHSSSAPAPAAVGGDAAAAVAGSGGGMTTMMMGGGGG 83

Query: 80  ------AASKNVASERNRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQER 109
                  A+KN+  ER+RRRKLNE+L+ALRSVVPNI+KMDKASIIKDAI+YI  L  +E+
Sbjct: 84  GGDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQ 143

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy Swiss-Prot
Match: Q9ZVX2 (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana OX=3702 GN=AMS PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 3.4e-11
Identity = 36/71 (50.70%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 35  YDSSSPDGSAASKNVASERNRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHD 94
           Y   S  GS A KN+ +ER RR+KLN+RL+ALRS+VP I+K+D+ASI+ DAI+Y+ +L +
Sbjct: 303 YKKKSGKGSQA-KNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQN 362

Query: 95  QERRIQAEIYE 106
           + + +Q E+ E
Sbjct: 363 EAKELQDELEE 372

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy Swiss-Prot
Match: Q9LNJ5 (Transcription factor bHLH13 OS=Arabidopsis thaliana OX=3702 GN=BHLH13 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.6e-11
Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 45  ASKNVASERNRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAE 103
           A  +V +ER RR KLN+R +ALRSVVPNISKMDKAS++ DA+ YI++LH + + ++AE
Sbjct: 431 ALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAE 488

[Close]

BLAST of Cucsat.G18476.T6 vs. NCBI nr
Match: XP_004146337.1 (transcription factor bHLH35 [Cucumis sativus] >KGN65490.1 hypothetical protein Csa_019770 [Cucumis sativus])

HSP 1 Score: 305 bits (782), Expect = 3.58e-103
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN
Sbjct: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD
Sbjct: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLD+S
Sbjct: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLS 157

[Close]

BLAST of Cucsat.G18476.T6 vs. NCBI nr
Match: KAA0058209.1 (transcription factor bHLH35 [Cucumis melo var. makuwa] >TYK28574.1 transcription factor bHLH35 [Cucumis melo var. makuwa])

HSP 1 Score: 276 bits (706), Expect = 5.70e-92
Identity = 142/157 (90.45%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MD IGDDYLN  G +IFIGEELDSW LEEP S  YDSSSPDGSAASKN+ SERNRRRKLN
Sbjct: 1   MDSIGDDYLNSLGTDIFIGEELDSWALEEPLSAYYDSSSPDGSAASKNIVSERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNI+KMDKASIIKDAIDYIHDLHDQERRIQAEIYELESG LKKITGYEFD
Sbjct: 61  ERLFALRSVVPNITKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGTLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           QDQLPLLLRSKRKKTEQY SYDSPVSRISPIEVLD+S
Sbjct: 121 QDQLPLLLRSKRKKTEQYLSYDSPVSRISPIEVLDLS 157

[Close]

BLAST of Cucsat.G18476.T6 vs. NCBI nr
Match: XP_008453552.1 (PREDICTED: transcription factor bHLH35 [Cucumis melo])

HSP 1 Score: 276 bits (706), Expect = 4.53e-91
Identity = 142/157 (90.45%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MD IGDDYLN  G +IFIGEELDSW LEEP S  YDSSSPDGSAASKN+ SERNRRRKLN
Sbjct: 1   MDSIGDDYLNSLGTDIFIGEELDSWALEEPLSAYYDSSSPDGSAASKNIVSERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNI+KMDKASIIKDAIDYIHDLHDQERRIQAEIYELESG LKKITGYEFD
Sbjct: 61  ERLFALRSVVPNITKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGTLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           QDQLPLLLRSKRKKTEQY SYDSPVSRISPIEVLD+S
Sbjct: 121 QDQLPLLLRSKRKKTEQYLSYDSPVSRISPIEVLDLS 157

[Close]

BLAST of Cucsat.G18476.T6 vs. NCBI nr
Match: XP_038878730.1 (transcription factor bHLH35-like isoform X3 [Benincasa hispida])

HSP 1 Score: 244 bits (622), Expect = 3.46e-79
Identity = 128/159 (80.50%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIG-EELDSWGLEEPFSGDYDSSSPD-GSAASKNVASERNRRRK 60
           MD IG+DY N  G +IFI  EE  SWG +EP SG YDSSSPD  S+ASKN  SERNRR+K
Sbjct: 1   MDCIGEDYYNSLGTDIFIATEEPGSWGFDEPVSGYYDSSSPDPSSSASKNTVSERNRRKK 60

Query: 61  LNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYE 120
           LNERLFALRSVVPNI+KMDKASIIKDAIDYI +LHDQERRIQAEIYELE+GKLKKITGYE
Sbjct: 61  LNERLFALRSVVPNITKMDKASIIKDAIDYIQELHDQERRIQAEIYELETGKLKKITGYE 120

Query: 121 FDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           FDQDQLPLLLRSKRKKT+ YFS+DSP SRISP+EVLD+S
Sbjct: 121 FDQDQLPLLLRSKRKKTDPYFSFDSPASRISPVEVLDLS 159

[Close]

BLAST of Cucsat.G18476.T6 vs. NCBI nr
Match: XP_038878729.1 (transcription factor bHLH35-like isoform X2 [Benincasa hispida])

HSP 1 Score: 244 bits (622), Expect = 5.32e-79
Identity = 128/159 (80.50%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIG-EELDSWGLEEPFSGDYDSSSPD-GSAASKNVASERNRRRK 60
           MD IG+DY N  G +IFI  EE  SWG +EP SG YDSSSPD  S+ASKN  SERNRR+K
Sbjct: 1   MDCIGEDYYNSLGTDIFIATEEPGSWGFDEPVSGYYDSSSPDPSSSASKNTVSERNRRKK 60

Query: 61  LNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYE 120
           LNERLFALRSVVPNI+KMDKASIIKDAIDYI +LHDQERRIQAEIYELE+GKLKKITGYE
Sbjct: 61  LNERLFALRSVVPNITKMDKASIIKDAIDYIQELHDQERRIQAEIYELETGKLKKITGYE 120

Query: 121 FDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           FDQDQLPLLLRSKRKKT+ YFS+DSP SRISP+EVLD+S
Sbjct: 121 FDQDQLPLLLRSKRKKTDPYFSFDSPASRISPVEVLDLS 159

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy TrEMBL
Match: A0A0A0LU95 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G425940 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 1.74e-103
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN
Sbjct: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD
Sbjct: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLD+S
Sbjct: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLS 157

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy TrEMBL
Match: A0A5A7UXG0 (Transcription factor bHLH35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002220 PE=4 SV=1)

HSP 1 Score: 276 bits (706), Expect = 2.76e-92
Identity = 142/157 (90.45%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MD IGDDYLN  G +IFIGEELDSW LEEP S  YDSSSPDGSAASKN+ SERNRRRKLN
Sbjct: 1   MDSIGDDYLNSLGTDIFIGEELDSWALEEPLSAYYDSSSPDGSAASKNIVSERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNI+KMDKASIIKDAIDYIHDLHDQERRIQAEIYELESG LKKITGYEFD
Sbjct: 61  ERLFALRSVVPNITKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGTLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           QDQLPLLLRSKRKKTEQY SYDSPVSRISPIEVLD+S
Sbjct: 121 QDQLPLLLRSKRKKTEQYLSYDSPVSRISPIEVLDLS 157

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy TrEMBL
Match: A0A1S3BWL7 (transcription factor bHLH35 OS=Cucumis melo OX=3656 GN=LOC103494233 PE=4 SV=1)

HSP 1 Score: 276 bits (706), Expect = 2.20e-91
Identity = 142/157 (90.45%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MD IGDDYLN  G +IFIGEELDSW LEEP S  YDSSSPDGSAASKN+ SERNRRRKLN
Sbjct: 1   MDSIGDDYLNSLGTDIFIGEELDSWALEEPLSAYYDSSSPDGSAASKNIVSERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNI+KMDKASIIKDAIDYIHDLHDQERRIQAEIYELESG LKKITGYEFD
Sbjct: 61  ERLFALRSVVPNITKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGTLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           QDQLPLLLRSKRKKTEQY SYDSPVSRISPIEVLD+S
Sbjct: 121 QDQLPLLLRSKRKKTEQYLSYDSPVSRISPIEVLDLS 157

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy TrEMBL
Match: A0A6J1E262 (transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111430100 PE=4 SV=1)

HSP 1 Score: 219 bits (559), Expect = 1.55e-69
Identity = 122/162 (75.31%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIG-EELDSWGLEEPFSGDYDSSSPDG----SAASKNVASERNR 60
           MD  G+D +N FG++IFI  EELDSWG +EP SG YDSSSP+G    S+A+KN+ASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKIT 120
           RRKLNERLFALRSVVPNI+KMDKASIIKDAIDYI DLH+QERR+Q EI ELESGK K IT
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRVQTEISELESGKFK-IT 120

Query: 121 GYEFDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           G EFDQ+ LPLLLR KRKKTE+YFSY SP SR SPIEV D+S
Sbjct: 121 GCEFDQE-LPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLS 160

[Close]

BLAST of Cucsat.G18476.T6 vs. ExPASy TrEMBL
Match: A0A6J1JJ79 (transcription factor bHLH35-like OS=Cucurbita maxima OX=3661 GN=LOC111484933 PE=4 SV=1)

HSP 1 Score: 218 bits (554), Expect = 8.92e-69
Identity = 121/162 (74.69%), Postives = 136/162 (83.95%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIG-EELDSWGLEEPFSGDYDSSSPDG----SAASKNVASERNR 60
           MD  G+D +N FG++IFI  EELDSWG +EP SG YDSSSP+G    S+A+KN+ASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKIT 120
           RRKLNERLFALRSVVPNI+KMDKASIIKDAIDYI DLH+QERR+Q EI ELESGK K IT
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRVQTEISELESGKFK-IT 120

Query: 121 GYEFDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDVS 157
           G EFDQ+ LPLLLR KR KTE+YFSY SP SR SPIEV D+S
Sbjct: 121 GCEFDQE-LPLLLRPKRNKTEKYFSYGSPASRTSPIEVQDLS 160

The following BLAST results are available for this feature:

BLAST of Cucsat.G18476.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HIV9	1.5e-27	57.66	Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1	[more]
Q700E3	5.8e-27	59.13	Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1	[more]
Q0JEB7	3.0e-15	42.75	Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=...	[more]
Q9ZVX2	3.4e-11	50.70	Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana OX=3702 GN=AMS ...	[more]
Q9LNJ5	7.6e-11	58.62	Transcription factor bHLH13 OS=Arabidopsis thaliana OX=3702 GN=BHLH13 PE=1 SV=1	[more]

BLAST of Cucsat.G18476.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146337.1	3.58e-103	99.36	transcription factor bHLH35 [Cucumis sativus] >KGN65490.1 hypothetical protein C...	[more]
KAA0058209.1	5.70e-92	90.45	transcription factor bHLH35 [Cucumis melo var. makuwa] >TYK28574.1 transcription...	[more]
XP_008453552.1	4.53e-91	90.45	PREDICTED: transcription factor bHLH35 [Cucumis melo]	[more]
XP_038878730.1	3.46e-79	80.50	transcription factor bHLH35-like isoform X3 [Benincasa hispida]	[more]
XP_038878729.1	5.32e-79	80.50	transcription factor bHLH35-like isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G18476.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU95	1.74e-103	99.36	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G425940 PE=4 S...	[more]
A0A5A7UXG0	2.76e-92	90.45	Transcription factor bHLH35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BWL7	2.20e-91	90.45	transcription factor bHLH35 OS=Cucumis melo OX=3656 GN=LOC103494233 PE=4 SV=1	[more]
A0A6J1E262	1.55e-69	75.31	transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111430100 P...	[more]
A0A6J1JJ79	8.92e-69	74.69	transcription factor bHLH35-like OS=Cucurbita maxima OX=3661 GN=LOC111484933 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 49..98 e-value: 4.4E-16 score: 69.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 49..93 e-value: 5.9E-12 score: 45.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 43..92 score: 16.831081
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 38..109 e-value: 5.9E-17 score: 63.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 41..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..54
None	No IPR available	PANTHER	PTHR31945:SF26	TRANSCRIPTION FACTOR BHLH35	coord: 15..157
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 15..157

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G18476	Cucsat.G18476	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18476.T6.E1	Cucsat.G18476.T6.E1	exon
Cucsat.G18476.T6.E2	Cucsat.G18476.T6.E2	exon
Cucsat.G18476.T6.E3	Cucsat.G18476.T6.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18476.T6.C1	Cucsat.G18476.T6.C1	CDS
Cucsat.G18476.T6.C2	Cucsat.G18476.T6.C2	CDS
Cucsat.G18476.T6.C3	Cucsat.G18476.T6.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18476.T6	Cucsat.G18476.T6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding