Cucsat.G18476 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18476
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	ctg3379: 2336298 .. 2340504 (+)
RNA-Seq Expression	Cucsat.G18476
Synteny	Cucsat.G18476

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTGAGGAAAATGAAGGAATCGTTCCCACGGGGAATTGGACGGTGGAGATCTTTCGAGGAAGTATCAAGAGTTTCACACAAGAGAGAAGGTGATTGGAAAATTGAATAACCCGCATGTAACTGTAGCATCACCCGTGTCCGCTCTATCAGGTATATATATATATATAATATTATATAATGAAATTCGATCACAGTGATCAAATCATTTACTAATACTGAGATAGCAACACATAATAATAAGAAATATTAACTTATAAACTCATCATTAACAACAACGATAACGATAATAATCATATCTTCCTCTCCGTCGAAGCTACCTACAGCCACCGGGGTATGGATATTATCGGAGACGACTACTTGAATCCCTTCGGGAATGAAATCTTCATAGGAGAAGAGCTCGACAGGTCTTTTCTATTTCTTTATTTCTTTATTTCTCTTTTTAAAATGTTGGTGTTAATGAGGGTTTTAGGGATTTTTTTTAAAAAAAACTGGAATTTGACGCCCGTGTTTTTGCTGATTACAGTTGGGGATTGGAAGAGCCGTTTTCGGGTGATTATGATTCGAGTTCGCCGGATGGATCGGCGGCTTCGAAGAACGTAGCATCGGAAAGGAATAGAAGGAGGAAGCTGAACGAGAGGCTTTTTGCACTTCGATCGGTTGTTCCGAATATAAGTAAGGTTAGGTTTAATTGATCAATTCGTTGCTGGTGTTTGATTTTCCATAACTAGGCTAATAGGCTTGGTTTTTTGGATTTTTGGGAATTAATCGATTGACAAATTTTGGATTGAGCAGATGGATAAGGCTTCGATTATAAAAGATGCAATCGATTACATCCATGATTTGCATGACCAAGAGAGGAGGATTCAAGCTGAAATTTACGAGCTCGAATCAGGAAAGTTGAAGAAGATAACAGGGTATGAATTTGACCAGGATCAACTTCCCTTACTGCTAAGATCAAAGAGGAAGAAAACTGAGCAATACTTCAGTTATGATTCTCCTGTTTCAAGAATTTCCCCAATTGAAGTTCTGGATGTAAGTTTCTTTCTCTCTTGCTAAGTTTCATAAATGAATTCGATAAGCGATTTTGAAAGTGAGGGGGATTTTGATGAATTATTGCAGCTTAGTGTAACATACATGGGAGATAGAACAATAGTAGTGAGCATGACCTGCTGCAAAAGAGCAGATTCAATGGTTAAACTCTGTGAAGTTTTTGAGTCACTCAACCTCAAGATCATCACTGCCAATATTACTGCTGTTTCTGGAAGGCTTCTGAAAACTGTCTTCATTGAGGTAACCACACTCTCCTCACCTCTTAGATCATTAATATAATCCATATAAATCAAATTGATTCTGAATTCGAGATACTATTCTCTCAAAGTCAGTCACATTGTGGCGCTCTCACCCAGTAATTTTAAAATTTGAACGGTTTTTGTGCTTGAAGTATTTTGTTTCATTATTCTCTTAAGATGTTCAAATGGGTATTAAATGAATAAGAGAATTCACTTATTAGCAGAATCAAACCAGTTTGTCAATGACTGTAAGAAGAAATGAAATGGAAAATGAATTTTTAAGAGGAAAAATAAGGAACTCGTGGCCTTTGCTAGGAAATGGAAATTGGGTATGTTTCTTTTGTGATTTGTCATGTGCTACCATACGCATAATACCCATAATTGGTCCTCAAAAAAAGGAGGAGATCAATATATGAAGATATATGCTTTTGTCTAAACCTATGGTGGTATCAGTGGAATGTTTTCTTTCTCTTTTTTTAAATAAACCTTTTATTATTAGTATTGTGTCGTTTTCTTTGGGCAGTTGCTTGCTGCTGTTTATTTTGGTGGTTTTGAATTAGAAATGTGCGTTTTACTGTGACGCTCGTTTTTTTCTTTACCTAATCTTCTTTTGAAAGACATTTATAAAGAAAATTAAAGGTTAAAATTCTCCCAAGTGTGTGTTAATAATCTCTTACTGAACAAAAAAGAAAGGTAAACTTCTATTTTAACGAATGAATATTTATCAAAAGAGAGGGTTTTGTGGATGGGTATGTTGGGTGTTGGATGAAAGAACTGTTTTGGAATTATCTTTGAAAATTGCTTACAATTTCTAAATAATGATAGTGAATAAAACAAATAAAGTCAATGATGTTTTGTTTCCGCGTGGGCCAGATTGTGTCTTTTCTCCCCCCCCCCCCCCCCCTCCTAAATGAAGTTCCTATCCTTACATTTGGCCTGTGTATTTTTCCTTACATAGAATTGGACACTTTGGTACTAATTTAGGAATATTTCCAAAATTTTGCAACATAAATTACGAAATTGGAAATAAACTCTTTTTTGTAACACCATCCACTTTCTTGGGGTTTTTGAAAAAAAAAAAAAAAACTATTTAAATGAAGTGTAAATATTGTTGTCAATTTTTTTTTGGACAAATTTTCCTACCTCCACATCCCTAAATATAGAGACAAACTCGTATTTGCCTACAAAATTTTAGAACTTAGACCAGATAATTATTTCATCTTTAATTTTTTGTATTTTGAACTTCATGTCTGTTTGCCTATGAAGTTGCATCTTGCTTCTCACTTATCGAATATGATTTTTCACATGAATTCCTAACTAAATTCTAAAAAATAAAAATTAAAAACAATTTTCTTAGTTTTCAAGACTTCAACTTAGTTTTTTAGAACGTTGAAAAAGATGGGATATACAACATGGAAATTCATGTTACTGGTAGAACTAATTTTAAAAGTTAAATTCTTATCCAAGTGAAATTCATGCTTGAAACACTACTTTCAAGTAAAACTTTCATTTCCATTGAAATTCTAAATACATTATTTTTGAAGATTTGTTTTATTATTAGTAGTAGTATTATTTAAATACACGAGTGGGAGATTTATTTGTCACTTGAGCTATGTTTTGGAGAACCTTTTCTTTCTTTTTTTTAAAGGCAAACATAGAAAATACACCACAAAATGGGGCATAATCTAAGTCTTGATTGCTTTTGGGTGAAGAAAGGTAGAAGTTGGTCTACGGGGAATTCTTCTGTGATGAGCTGTCCAAGACAAATTTATAGTGTGAGAAAGGAAAACAAAAGATATTGTCCAAATAAAGAATAGGCCATAATTTGTGGACTTAGTCAATAGAACCACTTTAGTAAAGTGGAAAATTCACTTACGATGCAAATTTTGTGAGGTTGGGAGTGAAAGCCATTTTTCGATTACCTCACCTCATCACCCCCACATCTTTAAGAACATGTAATTAGCTGACATGTCTATTGCTTTTCTCCTCTTCATGATTGTGCTTTCAATTATATACACATTTTCCCATAGTAAACGGGAGCCTCACCGCAAACTTAGCACATCCAGCCAGTGATAATTTTACGTTATAGAGGTTAAGTCACATAGCAGTGAAATTATATTGATAATGATAAAGCACTTAAACCTTATATTAATCTTTTAAATGATAATTAATGGCATATTCACGAATCAACCTAAAGTATGAAGACTACAAAAGTTCATACAATACAATCATTCCTTTCCTAGTAAGGAAAATAATTGTCGAATAAGTGCCCCTACTTTAAATAGTTATAAATTATTAATAGCTTTAACTTTTACTTCTTTCTAGAAAGCAATCAGACAAATAGAAAAAAAGAATAATCATATAGCAACCACCTATTTAAAATAATGGCCAAATCAGCTAGAACACTAATGAAAAAATTTCTTACTATATTCCTTCCTTGTTTGAAAATATAAGGAATATGCAATACCATAGTATTCCAACAACTCCAAGTATAGTATAGGGAAAAGGTTTTGGTGAGATTCAAGCAGAAGTAACTCTTCCCAAGCTGAAAATGAAAATGTAATTGAAATTATGCTTTGTGGCATTGCAGGCTGAGCAAGAGGAGAGAGATTGCTTGAAGATTAAAATAGAAACAGCCATTGCAGGTCTTAATGATCCACATAGCCCCATGAGTATCTGAATCTACAGATGGAAAACACACACAAAAAAAGAGATCGGACGGCTGGAAACTAGTTCTCTCCCTGATCAGAGTGTTCCATTTTGCTCTTTCTTGGGGTTGTCATGTCACATAAAATTGTTTTCCTTGTTGAGAGAGTTCTCCTTTCAGGGGTTCCGAGATTTTTTTTTTTCTTGGTCTAAGCAGATGTCTGTAGGAATGTATTTACACAATGATATTATAGAGTATTCACATAATGATGATTTCCCTTTGTCGCTTCAGTTTCTATGTACAGAATCTCCTAATAATGCCATTGCACAGCATCAAGATAGCAATATCCAATTTCTTAACATTTTTATGAAAAGGAAGGGGAAAAAAGGTGAACTTCTCCTATTCGACCAACTGC

Coding sequence (CDS)

ATGGATATTATCGGAGACGACTACTTGAATCCCTTCGGGAATGAAATCTTCATAGGAGAAGAGCTCGACAGTTGGGGATTGGAAGAGCCGTTTTCGGGTGATTATGATTCGAGTTCGCCGGATGGATCGGCGGCTTCGAAGAACGTAGCATCGGAAAGGAATAGAAGGAGGAAGCTGAACGAGAGGCTTTTTGCACTTCGATCGGTTGTTCCGAATATAAGTAAGATGGATAAGGCTTCGATTATAAAAGATGCAATCGATTACATCCATGATTTGCATGACCAAGAGAGGAGGATTCAAGCTGAAATTTACGAGCTCGAATCAGGAAAGTTGAAGAAGATAACAGGGTATGAATTTGACCAGGATCAACTTCCCTTACTGCTAAGATCAAAGAGGAAGAAAACTGAGCAATACTTCAGTTATGATTCTCCTGTTTCAAGAATTTCCCCAATTGAAGTTCTGGATCTTAGTGTAACATACATGGGAGATAGAACAATAGTAGTGAGCATGACCTGCTGCAAAAGAGCAGATTCAATGGTTAAACTCTGTGAAGTTTTTGAGTCACTCAACCTCAAGATCATCACTGCCAATATTACTGCTGTTTCTGGAAGGCTTCTGAAAACTGTCTTCATTGAGGCTGAGCAAGAGGAGAGAGATTGCTTGAAGATTAAAATAGAAACAGCCATTGCAGGTCTTAATGATCCACATAGCCCCATGAGTATCTGA

Protein sequence

MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMVKLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSPMSI

Homology

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BLAST of Cucsat.G18476 vs. ExPASy Swiss-Prot
Match: Q2HIV9 (Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.6e-59
Identity = 131/219 (59.82%), Postives = 165/219 (75.34%), Query Frame = 0


Query: 24  SWGLEEPFSGDYDSSSPDGSA---ASKNVASERNRRRKLNERLFALRSVVPNISKMDKAS 83
           SW LEE  SG YDSSSPDG+A   ASKN+ SERNRR+KLN+RLFALRSVVPNI+KMDKAS
Sbjct: 29  SWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKAS 88

Query: 84  IIKDAIDYIHDLHDQERRIQAEIYELESGKLKKIT-GYEFDQDQLPLLLRSKRKKTEQYF 143
           IIKDAI YI  L  +E++++AEI ELES     ++   +FD+D   LL+    KK +Q  
Sbjct: 89  IIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRD---LLVPVTSKKMKQLD 148

Query: 144 SYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMVKLCEVFESLNLKIITANIT 203
           S  S     S IEVL+L VT+MG+RT+VVS+TC KR D+MVKLCEVFESLNLKI+T+N+T
Sbjct: 149 SGSS----TSLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLT 208

Query: 204 AVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSP 239
           + SG +  TVFIEA++EE++ L++KIET I   N+  SP
Sbjct: 209 SFSGMIFHTVFIEADEEEQEVLRLKIETGIGAYNETQSP 240

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BLAST of Cucsat.G18476 vs. ExPASy Swiss-Prot
Match: Q700E3 (Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.6e-44
Identity = 108/229 (47.16%), Postives = 153/229 (66.81%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGE---ELDSWGLEEPFSGDYDSSSPDGS----AASKNVASER 60
           M+ +  +Y N +   +F      E DSW +EE FSG  +SSSPDG+    A+SKNV SER
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSER 60

Query: 61  NRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKL-- 120
           NRR+KLN+RLFALRSVVPNISK+DKAS+IKD+IDY+ +L DQE+ ++AEI ELES     
Sbjct: 61  NRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLL 120

Query: 121 -KKITGYEFDQDQLPLL-------LRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGD 180
              +  Y+ +  +  L        +RSK+ K   Y    S   +  PIEVL++ VT+MG+
Sbjct: 121 ENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDY----STRVQHYPIEVLEMKVTWMGE 180

Query: 181 RTIVVSMTCCKRADSMVKLCEVFESLNLKIITANITAVSGRLLKTVFIE 213
           +T+VV +TC K+ ++MV+LC+V ESLNL I+T N ++ + RL  T+F++
Sbjct: 181 KTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQ 225

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BLAST of Cucsat.G18476 vs. ExPASy Swiss-Prot
Match: Q0JEB7 (Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 102/283 (36.04%), Postives = 146/283 (51.59%), Query Frame = 0


Query: 20  EELDSWGLEEPFSGDYDSSSPDGS------------------------------------ 79
           EELDS  L      +Y+SSSPDGS                                    
Sbjct: 24  EELDSMYLPTQDDSNYESSSPDGSHSSSAPAPAAVGGDAAAAVAGSGGGMTTMMMGGGGG 83

Query: 80  ------AASKNVASERNRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQER 139
                  A+KN+  ER+RRRKLNE+L+ALRSVVPNI+KMDKASIIKDAI+YI  L  +E+
Sbjct: 84  GGDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQ 143

Query: 140 RIQAEIYELES--------GKLKKITGYEFDQD-----QLPLLLRSKRKKTEQYFSYDS- 199
           ++  E+  LES               G   D++       P     + KK ++  S  S 
Sbjct: 144 QMLREVAALESAAAASAAPAAANPFAGLGADEEHEYGHHHPSSSSERTKKVKRALSVSSI 203

Query: 200 ------PVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMVKLCEVFESLNLKIITAN 241
                   +   P+E+ +L V+ +GDR +VVS+TC KR D+M ++C   E L L++ITAN
Sbjct: 204 SDALLAAAAPAPPVEIQELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELRLRVITAN 263

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BLAST of Cucsat.G18476 vs. ExPASy Swiss-Prot
Match: Q9LSE2 (Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.2e-13
Identity = 57/184 (30.98%), Postives = 92/184 (50.00%), Query Frame = 0


Query: 46  SKNVASERNRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYE 105
           +KN+ +ER RR+KLN+RL+ LRSVVP ISKMD+ASI+ DAIDY+ +L  +   +  E+  
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 365

Query: 106 LESGKLKKITGYEFDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRT 165
              G L   +         P  L  + K+     S  SP  + + +E     V     R 
Sbjct: 366 TPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVE-----VRLREGRA 425

Query: 166 IVVSMTCCKRADSMVKLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKI 225
           + + M C +R   ++   +  ++L L +  A I+  +G  L     E  QE ++ L  +I
Sbjct: 426 VNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQI 484

Query: 226 ETAI 230
           +  +
Sbjct: 486 KAVL 484

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BLAST of Cucsat.G18476 vs. ExPASy Swiss-Prot
Match: Q9ZVX2 (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana OX=3702 GN=AMS PE=1 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-12
Identity = 57/191 (29.84%), Postives = 93/191 (48.69%), Query Frame = 0


Query: 35  YDSSSPDGSAASKNVASERNRRRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHD 94
           Y   S  GS A KN+ +ER RR+KLN+RL+ALRS+VP I+K+D+ASI+ DAI+Y+ +L +
Sbjct: 303 YKKKSGKGSQA-KNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQN 362

Query: 95  QERRIQAEI---YELESGKLKKITGYEFDQDQLP-----LLLRSKRKKTEQYFSYDSPVS 154
           + + +Q E+    E E G  +   G   +   +      L   S     +Q    ++   
Sbjct: 363 EAKELQDELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSND 422

Query: 155 RISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMVKLCEVFESLNLKIITANITAVSGRLL 214
           +   +E   + V  +  R   V + C  +     +L E  +SL L++  AN T     + 
Sbjct: 423 KGQEMEP-QVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVS 482

Query: 215 KTVFIEAEQEE 218
               +E    E
Sbjct: 483 NVFKVEKNDNE 491

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BLAST of Cucsat.G18476 vs. NCBI nr
Match: XP_004146337.1 (transcription factor bHLH35 [Cucumis sativus] >KGN65490.1 hypothetical protein Csa_019770 [Cucumis sativus])

HSP 1 Score: 465 bits (1196), Expect = 7.31e-165
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN
Sbjct: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD
Sbjct: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180
           QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV
Sbjct: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180

Query: 181 KLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSPMS 240
           KLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSPMS
Sbjct: 181 KLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSPMS 240

[Close]

BLAST of Cucsat.G18476 vs. NCBI nr
Match: XP_008453552.1 (PREDICTED: transcription factor bHLH35 [Cucumis melo])

HSP 1 Score: 427 bits (1099), Expect = 1.68e-149
Identity = 224/241 (92.95%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MD IGDDYLN  G +IFIGEELDSW LEEP S  YDSSSPDGSAASKN+ SERNRRRKLN
Sbjct: 1   MDSIGDDYLNSLGTDIFIGEELDSWALEEPLSAYYDSSSPDGSAASKNIVSERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNI+KMDKASIIKDAIDYIHDLHDQERRIQAEIYELESG LKKITGYEFD
Sbjct: 61  ERLFALRSVVPNITKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGTLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180
           QDQLPLLLRSKRKKTEQY SYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV
Sbjct: 121 QDQLPLLLRSKRKKTEQYLSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180

Query: 181 KLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSPMS 240
           KLCEVFESL LKIITANIT VSGRLLKTVFIEAEQEERD LKIKIETAIAGLNDPHSPMS
Sbjct: 181 KLCEVFESLKLKIITANITTVSGRLLKTVFIEAEQEERDYLKIKIETAIAGLNDPHSPMS 240

[Close]

BLAST of Cucsat.G18476 vs. NCBI nr
Match: XP_038878728.1 (transcription factor bHLH35-like isoform X1 [Benincasa hispida])

HSP 1 Score: 397 bits (1019), Expect = 7.41e-138
Identity = 211/243 (86.83%), Postives = 222/243 (91.36%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIG-EELDSWGLEEPFSGDYDSSSPD-GSAASKNVASERNRRRK 60
           MD IG+DY N  G +IFI  EE  SWG +EP SG YDSSSPD  S+ASKN  SERNRR+K
Sbjct: 1   MDCIGEDYYNSLGTDIFIATEEPGSWGFDEPVSGYYDSSSPDPSSSASKNTVSERNRRKK 60

Query: 61  LNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYE 120
           LNERLFALRSVVPNI+KMDKASIIKDAIDYI +LHDQERRIQAEIYELE+GKLKKITGYE
Sbjct: 61  LNERLFALRSVVPNITKMDKASIIKDAIDYIQELHDQERRIQAEIYELETGKLKKITGYE 120

Query: 121 FDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADS 180
           FDQDQLPLLLRSKRKKT+ YFS+DSP SRISP+EVLDLSVTYMGDRTIVVSMTCCKRADS
Sbjct: 121 FDQDQLPLLLRSKRKKTDPYFSFDSPASRISPVEVLDLSVTYMGDRTIVVSMTCCKRADS 180

Query: 181 MVKLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSP 240
           MVKLCEVFESL LKIITANITAVSGRLLKTVFIEAEQEERD LKIKIETAIAGLNDPHSP
Sbjct: 181 MVKLCEVFESLKLKIITANITAVSGRLLKTVFIEAEQEERDYLKIKIETAIAGLNDPHSP 240

[Close]

BLAST of Cucsat.G18476 vs. NCBI nr
Match: KAA0058209.1 (transcription factor bHLH35 [Cucumis melo var. makuwa] >TYK28574.1 transcription factor bHLH35 [Cucumis melo var. makuwa])

HSP 1 Score: 374 bits (961), Expect = 1.94e-129
Identity = 196/213 (92.02%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MD IGDDYLN  G +IFIGEELDSW LEEP S  YDSSSPDGSAASKN+ SERNRRRKLN
Sbjct: 1   MDSIGDDYLNSLGTDIFIGEELDSWALEEPLSAYYDSSSPDGSAASKNIVSERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNI+KMDKASIIKDAIDYIHDLHDQERRIQAEIYELESG LKKITGYEFD
Sbjct: 61  ERLFALRSVVPNITKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGTLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180
           QDQLPLLLRSKRKKTEQY SYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV
Sbjct: 121 QDQLPLLLRSKRKKTEQYLSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180

Query: 181 KLCEVFESLNLKIITANITAVSGRLLKTVFIEA 213
           KLCEVFESL LKIITANIT VSGRLLKTVFIE+
Sbjct: 181 KLCEVFESLKLKIITANITTVSGRLLKTVFIES 213

[Close]

BLAST of Cucsat.G18476 vs. NCBI nr
Match: XP_022922024.1 (transcription factor bHLH35-like [Cucurbita moschata] >KAG6589686.1 Transcription factor basic helix-loop-helix 35, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023366.1 Transcription factor bHLH35, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 368 bits (944), Expect = 2.03e-126
Identity = 202/246 (82.11%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIG-EELDSWGLEEPFSGDYDSSSPDG----SAASKNVASERNR 60
           MD  G+D +N FG++IFI  EELDSWG +EP SG YDSSSP+G    S+A+KN+ASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKIT 120
           RRKLNERLFALRSVVPNI+KMDKASIIKDAIDYI DLH+QERR+Q EI ELESGK K IT
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRVQTEISELESGKFK-IT 120

Query: 121 GYEFDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKR 180
           G EFDQ+ LPLLLR KRKKTE+YFSY SP SR SPIEV DLSVTYMGDRTI VSMTCCKR
Sbjct: 121 GCEFDQE-LPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGDRTIAVSMTCCKR 180

Query: 181 ADSMVKLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDP 240
           ADSMVKLCEVFESL LKIITANI+AVSGRLLKTVFIEAE+EERD LKIKIETAIAGLNDP
Sbjct: 181 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDP 240

[Close]

BLAST of Cucsat.G18476 vs. ExPASy TrEMBL
Match: A0A0A0LU95 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G425940 PE=4 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 3.54e-165
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN
Sbjct: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD
Sbjct: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180
           QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV
Sbjct: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180

Query: 181 KLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSPMS 240
           KLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSPMS
Sbjct: 181 KLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSPMS 240

[Close]

BLAST of Cucsat.G18476 vs. ExPASy TrEMBL
Match: A0A1S3BWL7 (transcription factor bHLH35 OS=Cucumis melo OX=3656 GN=LOC103494233 PE=4 SV=1)

HSP 1 Score: 427 bits (1099), Expect = 8.16e-150
Identity = 224/241 (92.95%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MD IGDDYLN  G +IFIGEELDSW LEEP S  YDSSSPDGSAASKN+ SERNRRRKLN
Sbjct: 1   MDSIGDDYLNSLGTDIFIGEELDSWALEEPLSAYYDSSSPDGSAASKNIVSERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNI+KMDKASIIKDAIDYIHDLHDQERRIQAEIYELESG LKKITGYEFD
Sbjct: 61  ERLFALRSVVPNITKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGTLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180
           QDQLPLLLRSKRKKTEQY SYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV
Sbjct: 121 QDQLPLLLRSKRKKTEQYLSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180

Query: 181 KLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDPHSPMS 240
           KLCEVFESL LKIITANIT VSGRLLKTVFIEAEQEERD LKIKIETAIAGLNDPHSPMS
Sbjct: 181 KLCEVFESLKLKIITANITTVSGRLLKTVFIEAEQEERDYLKIKIETAIAGLNDPHSPMS 240

[Close]

BLAST of Cucsat.G18476 vs. ExPASy TrEMBL
Match: A0A5A7UXG0 (Transcription factor bHLH35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002220 PE=4 SV=1)

HSP 1 Score: 374 bits (961), Expect = 9.39e-130
Identity = 196/213 (92.02%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIGEELDSWGLEEPFSGDYDSSSPDGSAASKNVASERNRRRKLN 60
           MD IGDDYLN  G +IFIGEELDSW LEEP S  YDSSSPDGSAASKN+ SERNRRRKLN
Sbjct: 1   MDSIGDDYLNSLGTDIFIGEELDSWALEEPLSAYYDSSSPDGSAASKNIVSERNRRRKLN 60

Query: 61  ERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKITGYEFD 120
           ERLFALRSVVPNI+KMDKASIIKDAIDYIHDLHDQERRIQAEIYELESG LKKITGYEFD
Sbjct: 61  ERLFALRSVVPNITKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGTLKKITGYEFD 120

Query: 121 QDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180
           QDQLPLLLRSKRKKTEQY SYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV
Sbjct: 121 QDQLPLLLRSKRKKTEQYLSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKRADSMV 180

Query: 181 KLCEVFESLNLKIITANITAVSGRLLKTVFIEA 213
           KLCEVFESL LKIITANIT VSGRLLKTVFIE+
Sbjct: 181 KLCEVFESLKLKIITANITTVSGRLLKTVFIES 213

[Close]

BLAST of Cucsat.G18476 vs. ExPASy TrEMBL
Match: A0A6J1E262 (transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111430100 PE=4 SV=1)

HSP 1 Score: 368 bits (944), Expect = 9.83e-127
Identity = 202/246 (82.11%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIG-EELDSWGLEEPFSGDYDSSSPDG----SAASKNVASERNR 60
           MD  G+D +N FG++IFI  EELDSWG +EP SG YDSSSP+G    S+A+KN+ASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKIT 120
           RRKLNERLFALRSVVPNI+KMDKASIIKDAIDYI DLH+QERR+Q EI ELESGK K IT
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRVQTEISELESGKFK-IT 120

Query: 121 GYEFDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKR 180
           G EFDQ+ LPLLLR KRKKTE+YFSY SP SR SPIEV DLSVTYMGDRTI VSMTCCKR
Sbjct: 121 GCEFDQE-LPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGDRTIAVSMTCCKR 180

Query: 181 ADSMVKLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDP 240
           ADSMVKLCEVFESL LKIITANI+AVSGRLLKTVFIEAE+EERD LKIKIETAIAGLNDP
Sbjct: 181 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDP 240

[Close]

BLAST of Cucsat.G18476 vs. ExPASy TrEMBL
Match: A0A6J1JJ79 (transcription factor bHLH35-like OS=Cucurbita maxima OX=3661 GN=LOC111484933 PE=4 SV=1)

HSP 1 Score: 366 bits (939), Expect = 5.67e-126
Identity = 201/246 (81.71%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MDIIGDDYLNPFGNEIFIG-EELDSWGLEEPFSGDYDSSSPDG----SAASKNVASERNR 60
           MD  G+D +N FG++IFI  EELDSWG +EP SG YDSSSP+G    S+A+KN+ASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKIT 120
           RRKLNERLFALRSVVPNI+KMDKASIIKDAIDYI DLH+QERR+Q EI ELESGK K IT
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRVQTEISELESGKFK-IT 120

Query: 121 GYEFDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKR 180
           G EFDQ+ LPLLLR KR KTE+YFSY SP SR SPIEV DLSVTYMGDRTI VSMTCCKR
Sbjct: 121 GCEFDQE-LPLLLRPKRNKTEKYFSYGSPASRTSPIEVQDLSVTYMGDRTIAVSMTCCKR 180

Query: 181 ADSMVKLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDP 240
           ADSMVKLCEVFESL LKIITANI+AVSGRLLKTVFIEAE+EERD LKIKIETAIAGLNDP
Sbjct: 181 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDP 240

The following BLAST results are available for this feature:

BLAST of Cucsat.G18476 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HIV9	6.6e-59	59.82	Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1	[more]
Q700E3	4.6e-44	47.16	Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1	[more]
Q0JEB7	1.5e-34	36.04	Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=...	[more]
Q9LSE2	3.2e-13	30.98	Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1	[more]
Q9ZVX2	1.6e-12	29.84	Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana OX=3702 GN=AMS ...	[more]

BLAST of Cucsat.G18476 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146337.1	7.31e-165	100.00	transcription factor bHLH35 [Cucumis sativus] >KGN65490.1 hypothetical protein C...	[more]
XP_008453552.1	1.68e-149	92.95	PREDICTED: transcription factor bHLH35 [Cucumis melo]	[more]
XP_038878728.1	7.41e-138	86.83	transcription factor bHLH35-like isoform X1 [Benincasa hispida]	[more]
KAA0058209.1	1.94e-129	92.02	transcription factor bHLH35 [Cucumis melo var. makuwa] >TYK28574.1 transcription...	[more]
XP_022922024.1	2.03e-126	82.11	transcription factor bHLH35-like [Cucurbita moschata] >KAG6589686.1 Transcriptio...	[more]

BLAST of Cucsat.G18476 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU95	3.54e-165	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G425940 PE=4 S...	[more]
A0A1S3BWL7	8.16e-150	92.95	transcription factor bHLH35 OS=Cucumis melo OX=3656 GN=LOC103494233 PE=4 SV=1	[more]
A0A5A7UXG0	9.39e-130	92.02	Transcription factor bHLH35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1E262	9.83e-127	82.11	transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111430100 P...	[more]
A0A6J1JJ79	5.67e-126	81.71	transcription factor bHLH35-like OS=Cucurbita maxima OX=3661 GN=LOC111484933 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 49..98 e-value: 4.4E-16 score: 69.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 49..93 e-value: 5.9E-12 score: 45.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 43..92 score: 16.831081
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 38..109 e-value: 5.9E-17 score: 63.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 41..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..54
None	No IPR available	PANTHER	PTHR31945:SF26	TRANSCRIPTION FACTOR BHLH35	coord: 15..157
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 15..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18476.T3	Cucsat.G18476.T3	mRNA
Cucsat.G18476.T1	Cucsat.G18476.T1	mRNA
Cucsat.G18476.T2	Cucsat.G18476.T2	mRNA
Cucsat.G18476.T4	Cucsat.G18476.T4	mRNA
Cucsat.G18476.T6	Cucsat.G18476.T6	mRNA
Cucsat.G18476.T5	Cucsat.G18476.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding