Cucsat.G17341.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGCATTTGATGGTCTTGGAATATCCCTTCTTTTGACATCAAACCCATCTATTCAGGTATTCGGTATTTCTTTTGATGATTTACATATAAATCAGATGTAGAACTCATGTAATCGAATTACAGCTGCATACTTATAGGCGATTTTTGCTCCAATATTCCAAATCAACGTTGGTTTCAAAAATTACATGCTGGGAGATTGGCATATATGTCATAGATATATTTCATTTGTTATTTGTCCTGCATGGATACTAGAATGAAAATGTTTGTAGATGATGGAAGAAACTGACATAGCATGTATGTATCACAGTACACCGCATTTGATCAACTGAAACAAAGGTTACTCCAGACAAAGCTGACACATGAATCAGGTACCGAGTCATCCCCAGAAGCTCTCTCAGCCTTTTCTGCTTTTGTACTTGGCGCCCTCTCGAAATGTGTTGCTACAATCTTGACATACCCTGCTATCAGGTGAAACTTTAATTTGAGTTCGTTGTCCAAATATTGGGGTTTTGTCACCCCTTGCTAGATTTCGTTTTAAATGTTCTGGTTAACATTTAAACCCATTATGTGTGAAACGTCGAGCCAAACCCTTTACCATATTTTGGGGGGAATTATTGTCAAATATCTGGATATCTTCTTCTGAAGGCAAAGTAAATGTTACACTTGCTATATCTCTGAAATTTGAGATGTCATTAAATAGTATATTATTTTATTTTATGAACCCACACCATTATTCAACGCCATTGTTATGGCAAATAATGAATGTATGTAGGATAAACTCTAATACTAGAAATTTTCTCCAATGTATTTTTTGTTCGAAAATGAATTATTGAAATGCATACAGGTGTAAGATCGTGATTCAGGCTGCGGAATCAGACCAAGAAAATAACGAGGACAAACAGCAGCATGGCGACAAAAAAAGTATTTCGGGTGCACTTAACACTATTTGGAAAAGAGAAGGCTTGCTAGGATTCTTCAAAGGATTAAATGCGCAAATACTAAAGACTGTGTTGAGCTCTGCATTACTTTTGATGATAAAAGAGAAGGTGGCAAAGACATCTTGGATCATATTGCTTGCACTTAGAAAGTTTCTCTTTCCTACCAATACAAGATTAAAGGCTGCTTGAATTTAAGCATTAGGCTTAAACTTTCTAAGATTTGAGAAAGTCCCAATTGGATTTCTGCAATCTATGAAGGAAAACATAAATTTTTAAATCAGGTTCGGGTTGGATCGGTTTCTGTCAGTACAAAACTGGGTCAAGACCCGACCCAGCTCAGTCCAATTACACCCCTATTGCAGTGCTTTATGAGTTCTTCAATGACATTACCAGCAATAATTGTTTATCTATTTGTTCAGTTTTTAATGGTAGGAAATAGGTCATAGATTGAAATTTAAACTCCTATATTTGTAATTTAATATTCTAAGAAATTATCTTGATATATTGAATTGGTTGAACATTGTTAATTATATAGTTTCTTTACTAT ATGTATGTATCACAGTACACCGCATTTGATCAACTGAAACAAAGGTTACTCCAGACAAAGCTGACACATGAATCAGGTACCGAGTCATCCCCAGAAGCTCTCTCAGCCTTTTCTGCTTTTGTACTTGGCGCCCTCTCGAAATGTGTTGCTACAATCTTGACATACCCTGCTATCAGGTGTAAGATCGTGATTCAGGCTGCGGAATCAGACCAAGAAAATAACGAGGACAAACAGCAGCATGGCGACAAAAAAAGTATTTCGGGTGCACTTAACACTATTTGGAAAAGAGAAGGCTTGCTAGGATTCTTCAAAGGATTAAATGCGCAAATACTAAAGACTGTGTTGAGCTCTGCATTACTTTTGATGATAAAAGAGAAGGTGGCAAAGACATCTTGGATCATATTGCTTGCACTTAGAAAGTTTCTCTTTCCTACCAATACAAGATTAAAGGCTGCTTGA MYVSQYTAFDQLKQRLLQTKLTHESGTESSPEALSAFSAFVLGALSKCVATILTYPAIRCKIVIQAAESDQENNEDKQQHGDKKSISGALNTIWKREGLLGFFKGLNAQILKTVLSSALLLMIKEKVAKTSWIILLALRKFLFPTNTRLKAA Homology
BLAST of Cucsat.G17341.T6 vs. ExPASy Swiss-Prot
Match: Q9MA90 (Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana OX=3702 GN=PNC1 PE=1 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 6.6e-41 Identity = 91/146 (62.33%), Postives = 114/146 (78.08%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. ExPASy Swiss-Prot
Match: Q8VZS0 (Peroxisomal adenine nucleotide carrier 2 OS=Arabidopsis thaliana OX=3702 GN=PNC2 PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.3e-39 Identity = 91/147 (61.90%), Postives = 113/147 (76.87%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. ExPASy Swiss-Prot
Match: B6ZJZ9 (Peroxisomal adenine nucleotide carrier 1 OS=Glycine max OX=3847 GN=PNC1 PE=2 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.9e-36 Identity = 84/147 (57.14%), Postives = 116/147 (78.91%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. ExPASy Swiss-Prot
Match: Q76P23 (Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum OX=44689 GN=mcfQ PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11 Identity = 41/122 (33.61%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. ExPASy Swiss-Prot
Match: O70579 (Peroxisomal membrane protein PMP34 OS=Mus musculus OX=10090 GN=Slc25a17 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08 Identity = 35/131 (26.72%), Postives = 76/131 (58.02%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. NCBI nr
Match: XP_004140157.1 (peroxisomal adenine nucleotide carrier 1 [Cucumis sativus] >KGN48027.1 hypothetical protein Csa_002878 [Cucumis sativus]) HSP 1 Score: 279 bits (713), Expect = 1.06e-91 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. NCBI nr
Match: KAA0061712.1 (peroxisomal adenine nucleotide carrier 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 259 bits (661), Expect = 7.92e-84 Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. NCBI nr
Match: XP_008449573.1 (PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Cucumis melo] >TYJ96048.1 peroxisomal adenine nucleotide carrier 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 259 bits (661), Expect = 7.92e-84 Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. NCBI nr
Match: KAG7013574.1 (Peroxisomal adenine nucleotide carrier 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 244 bits (624), Expect = 2.29e-78 Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. NCBI nr
Match: XP_022959385.1 (peroxisomal adenine nucleotide carrier 1-like [Cucurbita moschata]) HSP 1 Score: 244 bits (624), Expect = 3.21e-78 Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. ExPASy TrEMBL
Match: A0A0A0KI49 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425150 PE=3 SV=1) HSP 1 Score: 279 bits (713), Expect = 5.11e-92 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. ExPASy TrEMBL
Match: A0A5A7V0K5 (Peroxisomal adenine nucleotide carrier 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00860 PE=3 SV=1) HSP 1 Score: 259 bits (661), Expect = 3.84e-84 Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. ExPASy TrEMBL
Match: A0A5D3BCV0 (Peroxisomal adenine nucleotide carrier 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00060 PE=3 SV=1) HSP 1 Score: 259 bits (661), Expect = 3.84e-84 Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. ExPASy TrEMBL
Match: A0A1S3BMC3 (peroxisomal adenine nucleotide carrier 1-like OS=Cucumis melo OX=3656 GN=LOC103491415 PE=3 SV=1) HSP 1 Score: 259 bits (661), Expect = 3.84e-84 Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0
BLAST of Cucsat.G17341.T6 vs. ExPASy TrEMBL
Match: A0A6J1H650 (peroxisomal adenine nucleotide carrier 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460373 PE=3 SV=1) HSP 1 Score: 244 bits (624), Expect = 1.56e-78 Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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