Cucsat.G17289.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G17289.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription factor bHLH79
Location	ctg27: 2100536 .. 2104636 (+)
RNA-Seq Expression	Cucsat.G17289.T3
Synteny	Cucsat.G17289.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACTTTTTTTTCTTTTAAATTCCATTTATCTCACTTTTTTTTTCCTCAATTAAAATAATTTTGATTTCAATGTCAATAAGTTCATAAAAATAAATTGTTTTTAAAGAAATTATTGATTTGCAAATATATGTTGTCATGTCTATGGATGATTTCATCTTTATTCTTTTATGTAATCTTTGAAAATGTTAGATTTGGATAAAGAAGGAGGTGTTATTATTATAATATATTATGTTTACTAAATTGGATGATTTTGTTATAATAACTATTAAATCTTGAGATTAGTGTCATTTTCAAATCTCAAATTAATAATATGGTATCATTTAATATTTTCATTTTTTTAATAAGAGGGACAATTTAAAAAATAACGAGATATTAAAAAATTCATTCAATTCTTTATGACATATTTAAGTTTTCTTTTTCTCTATTCCTCTAAATTTAATATAATTAATTCAAACATTTTCTAAAATTTAATTTTATACTATAATTCACTTTGGATTTTAATTAATTGATACAATTATCGTGAGAATGAATGATGATTGACAAAAATTAGTAATAAATAAATGTGTTACCTTATTGATCAGTTTGTAATATCCAATTTAATTATAATTCAACTGTTTAACAATCTTAAATATAATTCAACAATATAGTTAAGACATAATAGAAATTTAGAGTCTATTTTTGTATTTTGCATGGTTATATGTTTAAAATACATACAATTAAAAAATTTGAAGATATTTTTTCTTCCATTTTGTTAAATTATTTTAAATTAAGATTACATAATATGGTTATGTTTGATGGAAAAGATATGATTAGAAAACGTACCTTGTTTAGTGAGGAAAATTAAAGAAATCCTTCCCATATGAGTAATATGATATGATAAAAAAATGAGGAGGTGTGTATTTTAAGTATAGAAATATATGTATTTTAGTCGTTGTAAAAGTAGGTTGATAAGAAGTGGTAAGGATAAAAATGGAGTTGGGAAGTAGATAGAAGATTTGTGTTGATGCAGTAATAATATGGGAGGGAGTGATGAATGGATGATTTAAGAATATTATGGTGAAAGAAACGAAAATGAAAATATAGAGAGGGATAAATTGATGGGAGAGAAAAGGTGAAGAGAAAAGAAAAAGGATTGACTGAATGGGAGAGGGGTATTTGATTCCTGAGTGCGAACCAACCTACAATGTCCAAAGGAGCTTCATGACATAAATACAACTCTCTTCTTCTTCCTTTTTCCAACCTACTTAAACTCCAAATCTCTCTTTCTCTCTCTCTCTCTCTCTCTTTTGTTTTTTCAACTCAACTCACAGTACAGCTCAAACAAAACTCGAGCTTTTCCATTAATCTCACCTTCATCCTTTTCCATTCCTGGCTTATATATATACTATCATGGGTTTACTTCTACTGCTTTTTCAAACTTGAATCCACCCACAGGCCACAACACACACTACCTTTCGTCAAATGACATGGATCCACCTACTCTCATCAACCAACCTTCATTTCCAACTACCCCTAATGCCAATCCCAATATCACCCCTTTCAATCTTTCTGAGATCTGGCACTTCCCAATTCATGGCGGAACCTCCGTTGAGGATTCTGGGCCTGCTCTTGCCCTCAGGATGGCTCATCTCGCTCATAATTTGACCCACTTTGGAGACATTGCCATTGGGAATCCAGAGGTTTCCCCTACTGACTCACTTCCCTTGCAATTGCAGCAGAGACTACCTCATGGTCATGGCGTTTCCAAGAAGCGCCGTGATTCAGACCAAGATTCGCCTAAAGTCAGTTCCACCAGTAATGGCAACAATGCCAATGCCAATAGCAGCGCTGGGGTATTTGTCTGAATCACTCCTTGTATATTGATCTGAATTCTGTTTCGTTTTCTTTAGTTAATTGAATCTGGAATGGCTAACGGAACTGGGAATCTGATCTGTTTTTGTCTTTTGAGTTCTCTTTGGTACTGAATCCCCATTAAACGATTTGGGATCATTTTGTTTGATTGTATTCTCTTTTCCCCTATCAACTGTTCGACAGAATGATTCTGGTGGAAAGCGCGTTAAAACAGCGGCGTGTAGAGATGATAATCACGAATCCAAAACAGAAGCGGAACCCAGATCTGGGAAGACCGAACAGAACTCCCAGCCTACTCCAGAACAACCCAAACAGGATTACATCCATGTGCGAGCGAGAAGGGGCCAAGCAACTGATAGCCATAGTCTGGCCGAAAGGGTACTCACTCAAGTCACTAGTTATGTATTAGTGTTACCAACTGCAGTTGGAAATCTTTATCCCCACACATGACTGGTCTTTTTCATAATTAATATACTATGACTTGGATTTCTCTGTGTATCTGTTGGATTCTTGAATATCTCGTATTGATTAGAATACTCTGTCGAACAGGCTAGAAGAGAAAAGATAAGTGAGAGAATGAAAATTCTACAAGATTTGGTCCCTGGGTGCAATAAGGTAGAGCTCTTTTTTTGTTTGAAATTATGTGATATATCCTATTAATGAGGCTTTTTTGTCTATAATCTTTCACTTTAATAACCCTTTCGCTCTTTTGAATTAAGCAAATGAAGATTTTTTTTTTTGAGCTTAGCTGAGATGACATTTATGAAAAGAATCCTGGAACAAATTCATGTTGTCAGATTTGACAATGTTTGGATAAATTTCGAAGAATTTTCCTATAAAACCATCTGGCCATGTGTTATTTGATCTCCCTAAATCATTGACAGCCCATCTAAACTTATCAACTTTTCAACAATTTTTGTCACTTTTAAGCATGGAATTAAGAGTTGGAAGTTCTCAGGTGATTGGAAAAGCGCTTGTACTTGATGAGATAATAAATTACATTCAATCTCTTCAGCGTCAGGTTGAGGTATGACTGGTGCCTTTCAAGTTATACTTATTGCTTTCTTAAATTACATTCAGACATGAAAAGTACTGAACTCCATAGTTATTAATTTTCATCTGATATGCAGTTTTTGTCGATGAAACTGGAAGCAGTTAATTCCCGAATTGGCCCTGGCATTGAAGTGTTTCCTCCAAAAGATGTAAGTATCTGTATCTGAAACAGATTTGTTGTCCACTTTGTTATTTGATTCAATATATCAACCATTCACTTTCCAAAACCTGAAGTCGTCACACTCACACAGACCCTATCAATTACAACTTTCTATCCTGGATAGCAAACTGTTGAACTCTGGTGTCAAAAGCTGAGTCGGTTTGATATATTCTCACCATGGAGAATGAAAGTGAACTCTCCATTCACCTAGCTGATGAGAGTTACATACAGATGGGAGTTTCAACACGTACACTCTTTGAGAAATGCAATAGAGTTGATGGAAATGGCCCCTTATGCTTCTTAGACACGTAGCTATCGGTATAAATTAGGATTTGGTTACGTAGATAGGTTAAAGCTATGGTTCTTTTAACGTTCTTAAATTACAAGTTTAGGTATTGTGTGGGGAAACCAGGGGAAAGATTAATAGAGATGAAGATCAATTTTTTTTTGTCTTCAAATATTCTTTTGTCATAACAAATCTAATTTTGCGTTTCAGTATGGTCAACAAACATTCGATACAACCGGCGTTGCGTTTGGTTCACAAGCAACAAGAGAATACAGCCGTGGCTCATCACCAGAATGGTTGCATATGCAGATTGGTGGTGGTTTCGAAAGAACGACGTAGTCTAGGAAATTCTCCCAACCATTATTACTAATAAAAGCAAGAAAGGAGGATGTTATTCGACCTCTAGTAGAGCTCTCAACAAGTATAGTCCATATGGAAAAAAAAATCAAAGGTAGACTTAATTTTCACATTCAGGGATGAAGATATGGATGCTGTTCATAGATCTGCTTTTAAGTTAGTGATTGAACATCTGTTAATGTGTTGGAAAGTAGATTCTCTGATATCTCTGCCTCATAAACTCCTCCATATAAATACTAAAAAGTTAACCTGCTGAACAAGCATTATTCTTGTGAAAAATAAAGTATTGCTTGGAATTAAGTTTCAGCATTATTGTCATTGTTGCAAACCTTCCTTCTTTCTTTCTTCAGCTATGTTAAAGTGATCTCGAGGTTTGTGATTGGTTTGATTCAC

Coding sequence (CDS)

ATGGATCCACCTACTCTCATCAACCAACCTTCATTTCCAACTACCCCTAATGCCAATCCCAATATCACCCCTTTCAATCTTTCTGAGATCTGGCACTTCCCAATTCATGGCGGAACCTCCGTTGAGGATTCTGGGCCTGCTCTTGCCCTCAGGATGGCTCATCTCGCTCATAATTTGACCCACTTTGGAGACATTGCCATTGGGAATCCAGAGGTTTCCCCTACTGACTCACTTCCCTTGCAATTGCAGCAGAGACTACCTCATGGTCATGGCGTTTCCAAGAAGCGCCGTGATTCAGACCAAGATTCGCCTAAAGTCAGTTCCACCAGTAATGGCAACAATGCCAATGCCAATAGCAGCGCTGGGAATGATTCTGGTGGAAAGCGCGTTAAAACAGCGGCGTGTAGAGATGATAATCACGAATCCAAAACAGAAGCGGAACCCAGATCTGGGAAGACCGAACAGAACTCCCAGCCTACTCCAGAACAACCCAAACAGGATTACATCCATGTGCGAGCGAGAAGGGGCCAAGCAACTGATAGCCATAGTCTGGCCGAAAGGGCTAGAAGAGAAAAGATAAGTGAGAGAATGAAAATTCTACAAGATTTGGTCCCTGGGTGCAATAAGGTGATTGGAAAAGCGCTTGTACTTGATGAGATAATAAATTACATTCAATCTCTTCAGCGTCAGGTTGAGTTTTTGTCGATGAAACTGGAAGCAGTTAATTCCCGAATTGGCCCTGGCATTGAAGTGTTTCCTCCAAAAGATGTAAGTATCTGTATCTGA

Protein sequence

MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLTHFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSSAGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDVSICI

Homology

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy Swiss-Prot
Match: Q0JXE7 (Transcription factor BPE OS=Arabidopsis thaliana OX=3702 GN=BPE PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.2e-51
Identity = 133/259 (51.35%), Postives = 159/259 (61.39%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           MDP  ++N+              PFNL+EIW FP++G ++  DS      R + +  N  
Sbjct: 1   MDPSGMMNEGG------------PFNLAEIWQFPLNGVSTAGDSS-----RRSFVGPN-- 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
            FGD  +          +   L Q +  G   + KRR+ +  S K+ ST           
Sbjct: 61  QFGDADLTTAANGDPARMSHALSQAVIEGISGAWKRREDESKSAKIVST----------I 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
             ++   KR K     D+  + K EAE    +TEQ  Q    +P +DYIHVRARRGQATD
Sbjct: 121 GASEGENKRQKI----DEVCDGKAEAESLGTETEQKKQQM--EPTKDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 224

Query: 241 VNSRIGPGIEVFPPKDVSI 260
           VNSR+ PGIEVFPPK+V I
Sbjct: 241 VNSRMNPGIEVFPPKEVMI 224

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy Swiss-Prot
Match: Q84T08 (Transcription factor BHLH089 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH089 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.4e-45
Identity = 110/175 (62.86%), Postives = 125/175 (71.43%), Query Frame = 0


Query: 89  GHGVSKKRRDS----DQDSPKVSSTSNGNNANANSSAGNDSGGKRVKTAACRDDNHESKT 148
           G G  ++R+      + DS ++ STS G     + +   DS  KR K +    DN   +T
Sbjct: 50  GGGAGRRRQREAPALEDDSSRIVSTSGGGGGGQDLT---DSEAKRFKASKSSGDNSSLRT 109

Query: 149 EAEPRS---GKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 208
           EAE  S    K+   + P PE PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 110 EAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 169

Query: 209 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 257
           DLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLSMKLEAVN+ +  GIE FPPKD
Sbjct: 170 DLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKD 221

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy Swiss-Prot
Match: Q9LV17 (Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.2e-43
Identity = 133/269 (49.44%), Postives = 159/269 (59.11%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           MDPP L+N  SF     ANP  + + LSEIW FP++       SG  LA+    +     
Sbjct: 1   MDPP-LVNDSSFSA---ANP--SSYTLSEIWPFPVNDAVR---SGLRLAVNSGRVFTRSE 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRD--SDQDSPK-VSSTSNGNNANA 120
           H G+  +   E S    L          G G S+K RD  S+ DS K VSS+S+GN    
Sbjct: 61  HSGNKDVSAAEESTVTDLTA--------GWG-SRKTRDLNSEDDSSKMVSSSSSGNEL-- 120

Query: 121 NSSAGNDSGGKRVKTAACRDDNHES--KTEAEPRSG-----KTEQNSQPTPEQPKQDYIH 180
                 +SG K+ K       N +   + E E  SG      TEQ ++P   +P +DYIH
Sbjct: 121 -----KESGDKKRKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKNKP---EPPKDYIH 180

Query: 181 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 240
           VRARRGQATD HSLAERARREKISE+M  LQD++PGCNK+IGKALVLDEIINYIQSLQRQ
Sbjct: 181 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 240

Query: 241 VEFLSMKLEAVNS--RIGPGIEVFPPKDV 258
           VEFLSMKLE VNS    GP I VFP  D+
Sbjct: 241 VEFLSMKLEVVNSGASTGPTIGVFPSGDL 241

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy Swiss-Prot
Match: Q69WS3 (Transcription factor BHLH094 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH094 PE=1 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 2.7e-42
Identity = 119/222 (53.60%), Postives = 138/222 (62.16%), Query Frame = 0


Query: 43  DSGPALALRMAHLAHNLTHFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDS--- 102
           D  P+LA  +    H+  HF   ++   + S +         R   G G  + R D+   
Sbjct: 2   DPAPSLAAELWRPHHHRHHFEASSVVTDQGSGS---------RGGGGSGRRRPRSDAGPE 61

Query: 103 DQDSPKVSSTSNGNNANANSSAGNDS-GGKRVKTAACRDDNHESKTEAEPRSGKT----E 162
           D D  KV STS  +         +D+   KR+K     D N   +TEA   SG +    +
Sbjct: 62  DDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAAD 121

Query: 163 QNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 222
           +N+ P PE PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 122 KNATP-PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 181

Query: 223 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 257
            VLDEIINYIQSLQ QVEFLSMKLEAVNS +  GI  FP KD
Sbjct: 182 SVLDEIINYIQSLQHQVEFLSMKLEAVNSHMINGIVAFPSKD 213

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.8e-36
Identity = 104/196 (53.06%), Postives = 127/196 (64.80%), Query Frame = 0


Query: 66  AIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSD-QDSPKVSSTSNGNNANANSSAGND 125
           A+ +PEV+P        ++R     G SK+   S    SP  S T+  N     S +  +
Sbjct: 206 ALVSPEVTPGGEFS---RKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSSEE 265

Query: 126 SGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSL 185
            GGKR +     +D+ E + E E   G    N++P PE PK DYIHVRARRGQATDSHSL
Sbjct: 266 KGGKRRRE---EEDDEEEEGEGE---GNKSNNTKP-PEPPK-DYIHVRARRGQATDSHSL 325

Query: 186 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN-S 245
           AER RREKI ERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN +
Sbjct: 326 AERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDT 385

Query: 246 RIGPGIEVFPPKDVSI 260
           R+   ++    KDV I
Sbjct: 386 RLDFNVDALVSKDVMI 390

[Close]

BLAST of Cucsat.G17289.T3 vs. NCBI nr
Match: XP_004146756.1 (transcription factor BHLH089 [Cucumis sativus])

HSP 1 Score: 502 bits (1293), Expect = 2.15e-178
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT
Sbjct: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
           HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS
Sbjct: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
           AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD
Sbjct: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVFPPKD
Sbjct: 241 VNSRIGPGIEVFPPKD 256

[Close]

BLAST of Cucsat.G17289.T3 vs. NCBI nr
Match: XP_008464787.1 (PREDICTED: transcription factor bHLH79 [Cucumis melo] >KAA0045396.1 transcription factor bHLH79 [Cucumis melo var. makuwa] >TYK11345.1 transcription factor bHLH79 [Cucumis melo var. makuwa])

HSP 1 Score: 498 bits (1281), Expect = 1.45e-176
Identity = 253/256 (98.83%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT
Sbjct: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
           HFGDIAIGNPEVSPTD +PLQLQQRLPHGHGVSKKRRDS+QDSPKVSSTSNGNNANANSS
Sbjct: 61  HFGDIAIGNPEVSPTDPVPLQLQQRLPHGHGVSKKRRDSEQDSPKVSSTSNGNNANANSS 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
           AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD
Sbjct: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVFPPKD
Sbjct: 241 VNSRIGPGIEVFPPKD 256

[Close]

BLAST of Cucsat.G17289.T3 vs. NCBI nr
Match: XP_038884167.1 (transcription factor BHLH089-like [Benincasa hispida])

HSP 1 Score: 448 bits (1153), Expect = 4.58e-157
Identity = 228/256 (89.06%), Postives = 240/256 (93.75%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           MDPPTLIN+ SFP+ PNAN NITP+NLSEIWHFPI+GGTSVE+SGPALALRMAHLAHNL 
Sbjct: 1   MDPPTLINESSFPSNPNANANITPYNLSEIWHFPINGGTSVEESGPALALRMAHLAHNLG 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
            FG+IA+GNPE+S TD + LQLQQRL HGHGVSKKRRD++QDSPK SSTSNGNNAN NS 
Sbjct: 61  QFGEIAMGNPEISSTDPVTLQLQQRLAHGHGVSKKRRDAEQDSPKASSTSNGNNANGNSG 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
             NDSGGKR+KTAACRDDNHESKTEAEPRSGK EQNSQP PEQPKQDYIHVRARRGQATD
Sbjct: 121 TANDSGGKRLKTAACRDDNHESKTEAEPRSGKAEQNSQPPPEQPKQDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVFPPKD
Sbjct: 241 VNSRIGPGIEVFPPKD 256

[Close]

BLAST of Cucsat.G17289.T3 vs. NCBI nr
Match: XP_022946626.1 (transcription factor BHLH094-like [Cucurbita moschata] >KAG6599074.1 Transcription factor basic helix-loop-helix 94, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030010.1 Transcription factor BHLH-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 400 bits (1027), Expect = 6.97e-138
Identity = 208/256 (81.25%), Postives = 226/256 (88.28%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           M+PPTL+N  SFP+ PNAN NITP+NL EIW FPI+GGT V++S P LALRMAHLAHNL 
Sbjct: 1   MNPPTLMNDGSFPSNPNANANITPYNLPEIWQFPINGGTGVDESEPGLALRMAHLAHNLG 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
           HF +IA+GNPEVS +  + L L QRL H  GVSKKR DSDQDSPK+SS+SNGNN + NS 
Sbjct: 61  HFEEIAMGNPEVSSSVPMNLLLLQRLAHVRGVSKKRLDSDQDSPKLSSSSNGNNVSGNSG 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
           A NDSGGKR+K+AACRDD HESKTEAEPRSGK E+NSQP PE+PK DYIHVRARRGQATD
Sbjct: 121 AANDSGGKRLKSAACRDDKHESKTEAEPRSGKAEENSQPPPEKPKLDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVF PKD
Sbjct: 241 VNSRIGPGIEVFSPKD 256

[Close]

BLAST of Cucsat.G17289.T3 vs. NCBI nr
Match: XP_023546043.1 (transcription factor BHLH089-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394 bits (1012), Expect = 1.34e-135
Identity = 206/256 (80.47%), Postives = 224/256 (87.50%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           M+PPTL+N  SFP+ PNAN NITP+NL EIW FPI+GGT V++S P LALRMAHLAHNL 
Sbjct: 1   MNPPTLMNDGSFPSNPNANANITPYNLPEIWQFPINGGTGVDESEPGLALRMAHLAHNLG 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
           HF +IA+GNPEVS +  + L L QRL H  GVSKKR DSDQDSPK+SS+SNGNN + NS 
Sbjct: 61  HFEEIAMGNPEVSSSVPMNLLLLQRLAHVRGVSKKRLDSDQDSPKLSSSSNGNNVSGNSG 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
           A NDSGGKR+K+AACRDD  ESKTEAEPRSGK  +NSQP PE+PK DYIHVRARRGQATD
Sbjct: 121 AANDSGGKRLKSAACRDDKQESKTEAEPRSGKAGENSQPPPEKPKLDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVF PKD
Sbjct: 241 VNSRIGPGIEVFSPKD 256

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy TrEMBL
Match: A0A0A0KG05 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403070 PE=4 SV=1)

HSP 1 Score: 502 bits (1293), Expect = 1.04e-178
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT
Sbjct: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
           HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS
Sbjct: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
           AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD
Sbjct: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVFPPKD
Sbjct: 241 VNSRIGPGIEVFPPKD 256

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy TrEMBL
Match: A0A5A7TTF0 (Transcription factor bHLH79 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00200 PE=4 SV=1)

HSP 1 Score: 498 bits (1281), Expect = 7.03e-177
Identity = 253/256 (98.83%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT
Sbjct: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
           HFGDIAIGNPEVSPTD +PLQLQQRLPHGHGVSKKRRDS+QDSPKVSSTSNGNNANANSS
Sbjct: 61  HFGDIAIGNPEVSPTDPVPLQLQQRLPHGHGVSKKRRDSEQDSPKVSSTSNGNNANANSS 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
           AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD
Sbjct: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVFPPKD
Sbjct: 241 VNSRIGPGIEVFPPKD 256

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy TrEMBL
Match: A0A1S3CNW1 (transcription factor bHLH79 OS=Cucumis melo OX=3656 GN=LOC103502592 PE=4 SV=1)

HSP 1 Score: 498 bits (1281), Expect = 7.03e-177
Identity = 253/256 (98.83%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT
Sbjct: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
           HFGDIAIGNPEVSPTD +PLQLQQRLPHGHGVSKKRRDS+QDSPKVSSTSNGNNANANSS
Sbjct: 61  HFGDIAIGNPEVSPTDPVPLQLQQRLPHGHGVSKKRRDSEQDSPKVSSTSNGNNANANSS 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
           AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD
Sbjct: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVFPPKD
Sbjct: 241 VNSRIGPGIEVFPPKD 256

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy TrEMBL
Match: A0A6J1G465 (transcription factor BHLH094-like OS=Cucurbita moschata OX=3662 GN=LOC111450634 PE=4 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 3.37e-138
Identity = 208/256 (81.25%), Postives = 226/256 (88.28%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           M+PPTL+N  SFP+ PNAN NITP+NL EIW FPI+GGT V++S P LALRMAHLAHNL 
Sbjct: 1   MNPPTLMNDGSFPSNPNANANITPYNLPEIWQFPINGGTGVDESEPGLALRMAHLAHNLG 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
           HF +IA+GNPEVS +  + L L QRL H  GVSKKR DSDQDSPK+SS+SNGNN + NS 
Sbjct: 61  HFEEIAMGNPEVSSSVPMNLLLLQRLAHVRGVSKKRLDSDQDSPKLSSSSNGNNVSGNSG 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
           A NDSGGKR+K+AACRDD HESKTEAEPRSGK E+NSQP PE+PK DYIHVRARRGQATD
Sbjct: 121 AANDSGGKRLKSAACRDDKHESKTEAEPRSGKAEENSQPPPEKPKLDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVF PKD
Sbjct: 241 VNSRIGPGIEVFSPKD 256

[Close]

BLAST of Cucsat.G17289.T3 vs. ExPASy TrEMBL
Match: A0A6J1KBN0 (transcription factor BHLH094-like OS=Cucurbita maxima OX=3661 GN=LOC111494000 PE=4 SV=1)

HSP 1 Score: 392 bits (1007), Expect = 3.73e-135
Identity = 204/256 (79.69%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 1   MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLT 60
           M+PPTL+N  SFP+ PNAN NITP+NL EIW FPI+GGT V++S P LALRMAHLAHNL 
Sbjct: 1   MNPPTLMNDGSFPSNPNANANITPYNLPEIWQFPINGGTGVDESEPGLALRMAHLAHNLG 60

Query: 61  HFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSS 120
            F ++A+GNPEVS +  + L L QRL H  GVSKKR DSDQDSPK+SS+SNGNN + NS 
Sbjct: 61  QFEELAMGNPEVSSSVPMNLLLLQRLAHARGVSKKRLDSDQDSPKLSSSSNGNNVSGNSG 120

Query: 121 AGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATD 180
           A NDSGGKR+K+AACRDD HESKTEAEPRSGK  +NSQP PE+PK DYIHVRARRGQATD
Sbjct: 121 AANDSGGKRLKSAACRDDKHESKTEAEPRSGKAVENSQPPPEKPKLDYIHVRARRGQATD 180

Query: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 240
           SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ QVEFLSMKLEA
Sbjct: 181 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQSQVEFLSMKLEA 240

Query: 241 VNSRIGPGIEVFPPKD 256
           VNSRIGPGIEVF PKD
Sbjct: 241 VNSRIGPGIEVFSPKD 256

The following BLAST results are available for this feature:

BLAST of Cucsat.G17289.T3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0JXE7	3.2e-51	51.35	Transcription factor BPE OS=Arabidopsis thaliana OX=3702 GN=BPE PE=2 SV=1	[more]
Q84T08	3.4e-45	62.86	Transcription factor BHLH089 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH089...	[more]
Q9LV17	4.2e-43	49.44	Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1	[more]
Q69WS3	2.7e-42	53.60	Transcription factor BHLH094 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH094...	[more]
Q9FJL4	3.8e-36	53.06	Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1	[more]

BLAST of Cucsat.G17289.T3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146756.1	2.15e-178	100.00	transcription factor BHLH089 [Cucumis sativus]	[more]
XP_008464787.1	1.45e-176	98.83	PREDICTED: transcription factor bHLH79 [Cucumis melo] >KAA0045396.1 transcriptio...	[more]
XP_038884167.1	4.58e-157	89.06	transcription factor BHLH089-like [Benincasa hispida]	[more]
XP_022946626.1	6.97e-138	81.25	transcription factor BHLH094-like [Cucurbita moschata] >KAG6599074.1 Transcripti...	[more]
XP_023546043.1	1.34e-135	80.47	transcription factor BHLH089-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G17289.T3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG05	1.04e-178	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403070 PE=4 S...	[more]
A0A5A7TTF0	7.03e-177	98.83	Transcription factor bHLH79 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CNW1	7.03e-177	98.83	transcription factor bHLH79 OS=Cucumis melo OX=3656 GN=LOC103502592 PE=4 SV=1	[more]
A0A6J1G465	3.37e-138	81.25	transcription factor BHLH094-like OS=Cucurbita moschata OX=3662 GN=LOC111450634 ...	[more]
A0A6J1KBN0	3.73e-135	79.69	transcription factor BHLH094-like OS=Cucurbita maxima OX=3661 GN=LOC111494000 PE...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 224..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..126
None	No IPR available	PANTHER	PTHR12565:SF366	BNAC05G07950D PROTEIN	coord: 1..258
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 167..252 e-value: 2.29858E-61 score: 186.109
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 183..233 e-value: 1.0E-10 score: 51.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 181..228 e-value: 2.0E-8 score: 34.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 177..227 score: 15.827638
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 174..246 e-value: 5.0E-16 score: 60.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 175..245
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 1..258

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G17289	Cucsat.G17289	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G17289.T3.E1	Cucsat.G17289.T3.E1	exon
Cucsat.G17289.T3.E2	Cucsat.G17289.T3.E2	exon
Cucsat.G17289.T3.E3	Cucsat.G17289.T3.E3	exon
Cucsat.G17289.T3.E4	Cucsat.G17289.T3.E4	exon
Cucsat.G17289.T3.E5	Cucsat.G17289.T3.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G17289.T3.C1	Cucsat.G17289.T3.C1	CDS
Cucsat.G17289.T3.C2	Cucsat.G17289.T3.C2	CDS
Cucsat.G17289.T3.C3	Cucsat.G17289.T3.C3	CDS
Cucsat.G17289.T3.C4	Cucsat.G17289.T3.C4	CDS
Cucsat.G17289.T3.C5	Cucsat.G17289.T3.C5	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G17289.T3	Cucsat.G17289.T3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	DNA-binding transcription factor activity