Cucsat.G17289 (gene) Cucumber (B10) v3

Overview
NameCucsat.G17289
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptiontranscription factor bHLH79
Locationctg27: 2102430 .. 2104615 (+)
RNA-Seq ExpressionCucsat.G17289
SyntenyCucsat.G17289
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCACTTTTTTTTCTTTTAAATTCCATTTATCTCACTTTTTTTTTCCTCAATTAAAATAATTTTGATTTCAATGTCAATAAGTTCATAAAAATAAATTGTTTTTAAAGAAATTATTGATTTGCAAATATATGTTGTCATGTCTATGGATGATTTCATCTTTATTCTTTTATGTAATCTTTGAAAATGTTAGATTTGGATAAAGAAGGAGGTGTTATTATTATAATATATTATGTTTACTAAATTGGATGATTTTGTTATAATAACTATTAAATCTTGAGATTAGTGTCATTTTCAAATCTCAAATTAATAATATGGTATCATTTAATATTTTCATTTTTTTAATAAGAGGGACAATTTAAAAAATAACGAGATATTAAAAAATTCATTCAATTCTTTATGACATATTTAAGTTTTCTTTTTCTCTATTCCTCTAAATTTAATATAATTAATTCAAACATTTTCTAAAATTTAATTTTATACTATAATTCACTTTGGATTTTAATTAATTGATACAATTATCGTGAGAATGAATGATGATTGACAAAAATTAGTAATAAATAAATGTGTTACCTTATTGATCAGTTTGTAATATCCAATTTAATTATAATTCAACTGTTTAACAATCTTAAATATAATTCAACAATATAGTTAAGACATAATAGAAATTTAGAGTCTATTTTTGTATTTTGCATGGTTATATGTTTAAAATACATACAATTAAAAAATTTGAAGATATTTTTTCTTCCATTTTGTTAAATTATTTTAAATTAAGATTACATAATATGGTTATGTTTGATGGAAAAGATATGATTAGAAAACGTACCTTGTTTAGTGAGGAAAATTAAAGAAATCCTTCCCATATGAGTAATATGATATGATAAAAAAATGAGGAGGTGTGTATTTTAAGTATAGAAATATATGTATTTTAGTCGTTGTAAAAGTAGGTTGATAAGAAGTGGTAAGGATAAAAATGGAGTTGGGAAGTAGATAGAAGATTTGTGTTGATGCAGTAATAATATGGGAGGGAGTGATGAATGGATGATTTAAGAATATTATGGTGAAAGAAACGAAAATGAAAATATAGAGAGGGATAAATTGATGGGAGAGAAAAGGTGAAGAGAAAAGAAAAAGGATTGACTGAATGGGAGAGGGGTATTTGATTCCTGAGTGCGAACCAACCTACAATGTCCAAAGGAGCTTCATGACATAAATACAACTCTCTTCTTCTTCCTTTTTCCAACCTACTTAAACTCCAAATCTCTCTTTCTCTCTCTCTCTCTCTCTCTTTTGTTTTTTCAACTCAACTCACAGTACAGCTCAAACAAAACTCGAGCTTTTCCATTAATCTCACCTTCATCCTTTTCCATTCCTGGCTTATATATATACTATCATGGGTTTACTTCTACTGCTTTTTCAAACTTGAATCCACCCACAGGCCACAACACACACTACCTTTCGTCAAATGACATGGATCCACCTACTCTCATCAACCAACCTTCATTTCCAACTACCCCTAATGCCAATCCCAATATCACCCCTTTCAATCTTTCTGAGATCTGGCACTTCCCAATTCATGGCGGAACCTCCGTTGAGGATTCTGGGCCTGCTCTTGCCCTCAGGATGGCTCATCTCGCTCATAATTTGACCCACTTTGGAGACATTGCCATTGGGAATCCAGAGGTTTCCCCTACTGACTCACTTCCCTTGCAATTGCAGCAGAGACTACCTCATGGTCATGGCGTTTCCAAGAAGCGCCGTGATTCAGACCAAGATTCGCCTAAAGTCAGTTCCACCAGTAATGGCAACAATGCCAATGCCAATAGCAGCGCTGGGGTATTTGTCTGAATCACTCCTTGTATATTGATCTGAATTCTGTTTCGTTTTCTTTAGTTAATTGAATCTGGAATGGCTAACGGAACTGGGAATCTGATCTGTTTTTGTCTTTTGAGTTCTCTTTGGTACTGAATCCCCATTAAACGATTTGGGATCATTTTGTTTGATTGTATTCTCTTTTCCCCTATCAACTGTTCGACAGAATGATTCTGGTGGAAAGCGCGTTAAAACAGCGGCGTGTAGAGATGATAATCACGAATCCAAAACAGAAGCGGAACCCAGATCTGGGAAGACCGAACAGAACTCCCAGCCTACTCCAGAACAACCCAAACAGGATTACATCCATGTGCGAGCGAGAAGGGGCCAAGCAACTGATAGCCATAGTCTGGCCGAAAGGGTACTCACTCAAGTCACTAGTTATGTATTAGTGTTACCAACTGCAGTTGGAAATCTTTATCCCCACACATGACTGGTCTTTTTCATAATTAATATACTATGACTTGGATTTCTCTGTGTATCTGTTGGATTCTTGAATATCTCGTATTGATTAGAATACTCTGTCGAACAGGCTAGAAGAGAAAAGATAAGTGAGAGAATGAAAATTCTACAAGATTTGGTCCCTGGGTGCAATAAGGTAGAGCTCTTTTTTTGTTTGAAATTATGTGATATATCCTATTAATGAGGCTTTTTTGTCTATAATCTTTCACTTTAATAACCCTTTCGCTCTTTTGAATTAAGCAAATGAAGATTTTTTTTTTTGAGCTTAGCTGAGATGACATTTATGAAAAGAATCCTGGAACAAATTCATGTTGTCAGATTTGACAATGTTTGGATAAATTTCGAAGAATTTTCCTATAAAACCATCTGGCCATGTGTTATTTGATCTCCCTAAATCATTGACAGCCCATCTAAACTTATCAACTTTTCAACAATTTTTGTCACTTTTAAGCATGGAATTAAGAGTTGGAAGTTCTCAGGTGATTGGAAAAGCGCTTGTACTTGATGAGATAATAAATTACATTCAATCTCTTCAGCGTCAGGTTGAGGTATGACTGGTGCCTTTCAAGTTATACTTATTGCTTTCTTAAATTACATTCAGACATGAAAAGTACTGAACTCCATAGTTATTAATTTTCATCTGATATGCAGTTTTTGTCGATGAAACTGGAAGCAGTTAATTCCCGAATTGGCCCTGGCATTGAAGTGTTTCCTCCAAAAGATGTAAGTATCTGTATCTGAAACAGATTTGTTGTCCACTTTGTTATTTGATTCAATATATCAACCATTCACTTTCCAAAACCTGAAGTCGTCACACTCACACAGACCCTATCAATTACAACTTTCTATCCTGGATAGCAAACTGTTGAACTCTGGTGTCAAAAGCTGAGTCGGTTTGATATATTCTCACCATGGAGAATGAAAGTGAACTCTCCATTCACCTAGCTGATGAGAGTTACATACAGATGGGAGTTTCAACACGTACACTCTTTGAGAAATGCAATAGAGTTGATGGAAATGGCCCCTTATGCTTCTTAGACACGTAGCTATCGGTATAAATTAGGATTTGGTTACGTAGATAGGTTAAAGCTATGGTTCTTTTAACGTTCTTAAATTACAAGTTTAGGTATTGTGTGGGGAAACCAGGGGAAAGATTAATAGAGATGAAGATCAATTTTTTTTTGTCTTCAAATATTCTTTTGTCATAACAAATCTAATTTTGCGTTTCAGTATGGTCAACAAACATTCGATACAACCGGCGTTGCGTTTGGTTCACAAGCAACAAGAGAATACAGCCGTGGCTCATCACCAGAATGGTTGCATATGCAGATTGGTGGTGGTTTCGAAAGAACGACGTAGTCTAGGAAATTCTCCCAACCATTATTACTAATAAAAGCAAGAAAGGAGGATGTTATTCGACCTCTAGTAGAGCTCTCAACAAGTATAGTCCATATGGAAAAAAAAATCAAAGGTAGACTTAATTTTCACATTCAGGGATGAAGATATGGATGCTGTTCATAGATCTGCTTTTAAGTTAGTGATTGAACATCTGTTAATGTGTTGGAAAGTAGATTCTCTGATATCTCTGCCTCATAAACTCCTCCATATAAATACTAAAAAGTTAACCTGCTGAACAAGCATTATTCTTGTGAAAAATAAAGTATTGCTTGGAATTAAGTTTCAGCATTATTGTCATTGTTGCAAACCTTCCTTCTTTCTTTCTTCAGCTATGTTAAAGTGATCTCGAGGTTTGTGAT

Coding sequence (CDS)

ATGGATCCACCTACTCTCATCAACCAACCTTCATTTCCAACTACCCCTAATGCCAATCCCAATATCACCCCTTTCAATCTTTCTGAGATCTGGCACTTCCCAATTCATGGCGGAACCTCCGTTGAGGATTCTGGGCCTGCTCTTGCCCTCAGGATGGCTCATCTCGCTCATAATTTGACCCACTTTGGAGACATTGCCATTGGGAATCCAGAGGTTTCCCCTACTGACTCACTTCCCTTGCAATTGCAGCAGAGACTACCTCATGGTCATGGCGTTTCCAAGAAGCGCCGTGATTCAGACCAAGATTCGCCTAAAGTCAGTTCCACCAGTAATGGCAACAATGCCAATGCCAATAGCAGCGCTGGGAATGATTCTGGTGGAAAGCGCGTTAAAACAGCGGCGTGTAGAGATGATAATCACGAATCCAAAACAGAAGCGGAACCCAGATCTGGGAAGACCGAACAGAACTCCCAGCCTACTCCAGAACAACCCAAACAGGATTACATCCATGTGCGAGCGAGAAGGGGCCAAGCAACTGATAGCCATAGTCTGGCCGAAAGGGTACTCACTCAAGTCACTAGTTATGTATTAGTGTTACCAACTGCAGTTGGAAATCTTTATCCCCACACATGA

Protein sequence

MDPPTLINQPSFPTTPNANPNITPFNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLTHFGDIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSSAGNDSGGKRVKTAACRDDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERVLTQVTSYVLVLPTAVGNLYPHT
Homology
[Close]
BLAST of Cucsat.G17289 vs. ExPASy Swiss-Prot
Match: Q84T08 (Transcription factor BHLH089 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH089 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.5e-36
Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLSMKLEAVN+ +  GIE FPPKD
Sbjct: 162 MKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKD 221

Query: 61  YGQQTFDTT-GVAFGSQATREYSRGSSP-EWLHMQIGGGFERTT 103
           +G Q ++T  G+ F  Q  REY++GS+P EWLHMQIGG +ER T
Sbjct: 222 FGAQVYNTAPGLTFDPQTPREYAQGSTPSEWLHMQIGGTYERVT 265

[Close]
BLAST of Cucsat.G17289 vs. ExPASy Swiss-Prot
Match: Q69WS3 (Transcription factor BHLH094 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH094 PE=1 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-34
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKA VLDEIINYIQSLQ QVEFLSMKLEAVNS +  GI  FP KD
Sbjct: 154 MKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSMKLEAVNSHMINGIVAFPSKD 213

Query: 61  YGQQTFDT-TGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 103
           +G Q ++T  G+ F  Q TRE+++GS+ EWLHMQIG  +ER T
Sbjct: 214 FGAQPYNTAAGLTFDPQTTREFAQGSTSEWLHMQIGNAYERVT 256

[Close]
BLAST of Cucsat.G17289 vs. ExPASy Swiss-Prot
Match: Q9LV17 (Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 7.4e-28
Identity = 66/104 (63.46%), Postives = 72/104 (69.23%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS--RIGPGIEVFPP 60
           M  LQD++PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VNS    GP I VFP 
Sbjct: 179 MTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFPS 238

Query: 61  KDYGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 103
            D G    D     +  Q   E +R S PEWLHMQ+ G F RTT
Sbjct: 239 GDLGTLPIDVHRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT 281

[Close]
BLAST of Cucsat.G17289 vs. ExPASy Swiss-Prot
Match: Q0JXE7 (Transcription factor BPE OS=Arabidopsis thaliana OX=3702 GN=BPE PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.6e-25
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+ PGIEVFPPK+
Sbjct: 162 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKE 221

[Close]
BLAST of Cucsat.G17289 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-17
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R+   ++    KD
Sbjct: 284 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKD 343

[Close]
BLAST of Cucsat.G17289 vs. NCBI nr
Match: KAE8647288.1 (hypothetical protein Csa_004356 [Cucumis sativus])

HSP 1 Score: 207 bits (526), Expect = 2.65e-65
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD
Sbjct: 140 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 199

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT
Sbjct: 200 YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 241

[Close]
BLAST of Cucsat.G17289 vs. NCBI nr
Match: XP_038884167.1 (transcription factor BHLH089-like [Benincasa hispida])

HSP 1 Score: 207 bits (526), Expect = 1.49e-64
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD
Sbjct: 197 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 256

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT
Sbjct: 257 YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 298

[Close]
BLAST of Cucsat.G17289 vs. NCBI nr
Match: XP_004146756.1 (transcription factor BHLH089 [Cucumis sativus])

HSP 1 Score: 207 bits (526), Expect = 1.49e-64
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD
Sbjct: 197 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 256

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT
Sbjct: 257 YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 298

[Close]
BLAST of Cucsat.G17289 vs. NCBI nr
Match: XP_008464787.1 (PREDICTED: transcription factor bHLH79 [Cucumis melo] >KAA0045396.1 transcription factor bHLH79 [Cucumis melo var. makuwa] >TYK11345.1 transcription factor bHLH79 [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 2.43e-63
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD
Sbjct: 197 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 256

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFD++GVAFGSQATREYSRGSSPEWLHMQIGGGFERTT
Sbjct: 257 YGQQTFDSSGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 298

[Close]
BLAST of Cucsat.G17289 vs. NCBI nr
Match: XP_022946626.1 (transcription factor BHLH094-like [Cucurbita moschata] >KAG6599074.1 Transcription factor basic helix-loop-helix 94, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030010.1 Transcription factor BHLH-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198 bits (504), Expect = 3.19e-61
Identity = 98/102 (96.08%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVF PKD
Sbjct: 197 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFSPKD 256

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFDTTG  FGSQATREYSRGSSPEWLHMQIGG FERTT
Sbjct: 257 YGQQTFDTTGTTFGSQATREYSRGSSPEWLHMQIGGSFERTT 298

[Close]
BLAST of Cucsat.G17289 vs. ExPASy TrEMBL
Match: A0A0A0KG05 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403070 PE=4 SV=1)

HSP 1 Score: 207 bits (526), Expect = 7.23e-65
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD
Sbjct: 197 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 256

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT
Sbjct: 257 YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 298

[Close]
BLAST of Cucsat.G17289 vs. ExPASy TrEMBL
Match: A0A5A7TTF0 (Transcription factor bHLH79 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00200 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.18e-63
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD
Sbjct: 197 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 256

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFD++GVAFGSQATREYSRGSSPEWLHMQIGGGFERTT
Sbjct: 257 YGQQTFDSSGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 298

[Close]
BLAST of Cucsat.G17289 vs. ExPASy TrEMBL
Match: A0A1S3CNW1 (transcription factor bHLH79 OS=Cucumis melo OX=3656 GN=LOC103502592 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.18e-63
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD
Sbjct: 197 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 256

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFD++GVAFGSQATREYSRGSSPEWLHMQIGGGFERTT
Sbjct: 257 YGQQTFDSSGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 298

[Close]
BLAST of Cucsat.G17289 vs. ExPASy TrEMBL
Match: A0A6J1G465 (transcription factor BHLH094-like OS=Cucurbita moschata OX=3662 GN=LOC111450634 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 1.54e-61
Identity = 98/102 (96.08%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVF PKD
Sbjct: 197 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFSPKD 256

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFDTTG  FGSQATREYSRGSSPEWLHMQIGG FERTT
Sbjct: 257 YGQQTFDTTGTTFGSQATREYSRGSSPEWLHMQIGGSFERTT 298

[Close]
BLAST of Cucsat.G17289 vs. ExPASy TrEMBL
Match: A0A6J1DV35 (transcription factor BHLH094 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024645 PE=4 SV=1)

HSP 1 Score: 196 bits (497), Expect = 7.79e-61
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0 

Query: 1   MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKD 60
           MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN+RI P +E+FP KD
Sbjct: 169 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRISPSMEMFPSKD 228

Query: 61  YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 102
           YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT
Sbjct: 229 YGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 270

The following BLAST results are available for this feature:
BLAST of Cucsat.G17289 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84T081.5e-3673.08Transcription factor BHLH089 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH089... [more]
Q69WS32.4e-3470.87Transcription factor BHLH094 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH094... [more]
Q9LV177.4e-2863.46Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1[more]
Q0JXE72.6e-2595.00Transcription factor BPE OS=Arabidopsis thaliana OX=3702 GN=BPE PE=2 SV=1[more]
Q9SRT22.6e-1771.67Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1[more]
BLAST of Cucsat.G17289 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647288.12.65e-65100.00hypothetical protein Csa_004356 [Cucumis sativus][more]
XP_038884167.11.49e-64100.00transcription factor BHLH089-like [Benincasa hispida][more]
XP_004146756.11.49e-64100.00transcription factor BHLH089 [Cucumis sativus][more]
XP_008464787.12.43e-6398.04PREDICTED: transcription factor bHLH79 [Cucumis melo] >KAA0045396.1 transcriptio... [more]
XP_022946626.13.19e-6196.08transcription factor BHLH094-like [Cucurbita moschata] >KAG6599074.1 Transcripti... [more]
BLAST of Cucsat.G17289 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KG057.23e-65100.00BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403070 PE=4 S... [more]
A0A5A7TTF01.18e-6398.04Transcription factor bHLH79 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3CNW11.18e-6398.04transcription factor bHLH79 OS=Cucumis melo OX=3656 GN=LOC103502592 PE=4 SV=1[more]
A0A6J1G4651.54e-6196.08transcription factor BHLH094-like OS=Cucurbita moschata OX=3662 GN=LOC111450634 ... [more]
A0A6J1DV357.79e-6194.12transcription factor BHLH094 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48
NoneNo IPR availablePANTHERPTHR12565:SF366BNAC05G07950D PROTEINcoord: 1..102
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 1..50
e-value: 2.5E-7
score: 32.7
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 2..48
IPR024097Basic helix-loop-helix leucine zipper transcription factorPANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 1..102
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 1..31
score: 9.864142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G17289.T12Cucsat.G17289.T12mRNA
Cucsat.G17289.T11Cucsat.G17289.T11mRNA
Cucsat.G17289.T10Cucsat.G17289.T10mRNA
Cucsat.G17289.T15Cucsat.G17289.T15mRNA
Cucsat.G17289.T14Cucsat.G17289.T14mRNA
Cucsat.G17289.T9Cucsat.G17289.T9mRNA
Cucsat.G17289.T8Cucsat.G17289.T8mRNA
Cucsat.G17289.T3Cucsat.G17289.T3mRNA
Cucsat.G17289.T2Cucsat.G17289.T2mRNA
Cucsat.G17289.T1Cucsat.G17289.T1mRNA
Cucsat.G17289.T7Cucsat.G17289.T7mRNA
Cucsat.G17289.T6Cucsat.G17289.T6mRNA
Cucsat.G17289.T5Cucsat.G17289.T5mRNA
Cucsat.G17289.T4Cucsat.G17289.T4mRNA
Cucsat.G17289.T13Cucsat.G17289.T13mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity