Cucsat.G15685.T7 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGCTTCATATAAAACCCCCTTCTTTCTCTCTCACAAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTCAGGTAACTCTTCAAATCCATACAACTCTCGCTTTTCTTTTCCTACCTTCTTCCCTTATCTCTTCCTACTCGTTGATTTCCCCTTAACTCTTTTAACTCCACTTTTGCTAATTTCGCATTCAATCATCTCTTTAATTGTCTTTTCCCAATCTCGTTTTTTTTCTTCTGGGTCTTGTTTCTTTGTTTATATTTTGAACATAGACGTTTGTATGATGTGGACTTGTCTTTGGAGTTTGGAAGTTATGTTGTTTTTGTGGTGAATTCTTGATTCTCCAGATTTGGAGTTGTGTATTGCATGGAGGAGGATTTTGGATCTTTTGACTGTGTTCTTTGTTTCAAGGGGACTGGAGAATGTGTAAAGGAATCATAAATGTGTTGAAATGAGTGGTGGAAATGTTCTTATGTCTTCTTGAGGTCATGTTTGACTTTGTTTTGAATTTGTGCCATGGGATTGAATTGTGTATTGGAAATGGATTTTTGAATTTGGTTAGTTTTGATTATTATTATTATTATTTTCATTTCCTTTTACTGAAATAGAGAGGTTTTGATCTGGGTTTGTATATCTGTTTTCAACTTCATGCTTATCGTTGACATTTGTGCCTTTTGTTGGGATGACAGTGTCTTCCCTAGTGGTCCTAGAAATGAACTTTTGAGAGCTGTTTCTAACATTATGCTAGGCTGTTAAGTAGTGCAATGGGAGTTTTTCATGGCTCCCTTGTGTCTTATGTAACCATGGAGTTTCATTTGGGGTTCATTTTGATCCGCAAGGATTGCTTTTGTTTGTTTTCCCCTATTATAAAAAGATCTTTTTCTGAATCAAATTCATCTTCATCGTTCCCCCCACCCCCCTAATAAATAAATAAAATAGTGGTTCTACATCTGAACTGCTACTGCTAGGTTGTTTTAATCATTTTTCAATATAAGTGATTATTTAATCGTTCAATTTTTACTCATCTCTCTATCTCTCTGTTGATAGTTACATTTAATTTATTTTTATTTTCCTACTTATAGTTATTATTTTGTATAGGGATCTTCATTCATTCATTGATATCACAATCAAGTGCTGCAATATGGATGGTTCATATAGCTTTTGGCAATTGGGTGATGAGCTGCGAGGTCAGACAAAAGTCTCTGAAGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACCAGATCAAAGGGGGAGCGCATGAATAACCTTGATTTTTCAAAGAGCACTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAGAGTTTCAACTTTAACATGTTGAGCTTGGATTCAAAAATGACCGACCCTGTTAACAAAAGTTCATTGAGGAATGGAATTTACAACATGAATGCAGTTTATGTGAAAAACAATACAAATGTTGCTGGAAATTTACCTGGTGCTAAGTTCAGTGGCAATGATTATATCAACAAAGATCTTACCAATTACAGTAGTACCAACAATAACGTTGGTGAAAATGCTAACTCCATCAATGCAATTGATAAAAGGTTCAAGACATTGCCAGCAACAGAGACACTGCCCAGAAATGAAGTTCTTGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAAGAAGACTTAAAGAGGCAACTTTTTGGTAATTGTGCTTTTACCCTACATTTTTTTTCTGACCTTGCAGATAGCATGTACAAGTAACTGTATGTTTATTATGCTGCATTTCTCAGATTTGCATTTTGTGTACTTATCAAGATGAGCTGCTGGATTTTTTAAAACAAATTTGCTTGCGTTTCACTTATCAAATGAATGATTAGAACTTTATGTGTGAACCTGTAATACAGTGGCTAGATTACGGGAAATAGTTAGTGGCGCAATGTCATATGCTTTATTCTTTGTGTGTTTTGCAGGTTTGCCTCCAAGGTATAGGGACTCGGTGCGTGCAATAACTCCAGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGGATTTTTGAGGTCTGTTATCTTTATATTTACATCCTTCTCCAGTTACTTTCATCATGTCAAACATCTTGTCAAGTCTAGGTTTGTATATCATATTTGTGCTTACAATAATATGTGATTACTGGTAAAGAACATACAAGTGGCCATTATGACGTGGTCTGATACAATCATGTAAAAATGGCTTAGGTCTAGAAGATTCTCTTTATATTCCTTATATTTACTGTATCATTAATGTCATGCCAATAAGATGGTAGATGTTGTATGTCATTTATTACTGAAGAATCTTCAATTGTTAATAGTTTTGGACATTGAAACTCGCATAAGGGAAAAGTGAAATCTTGATTGAAGTTCCTTTTTCCTTAAAAAAGGTAACTGTTAGGTAACCTGATTTGAATTCTGCTACTTATTTTGGTTCACAATTGGTTACTGCAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCGACTGCTTGGGAAGACAAGAAATGTAAAGGTGAATCCAGGTTTCCGGCTCAGGTAGAGTCTTGTATGCAGTATTCCATTTTCTTGTGCTCCTGTTTGTAGGAGGCTTATAATTTGCTAATAGAAGTATTTTTTCCCCAAAAAAATAGGTAAGGATCCGCATTAGGAAACTCTGCAGGGCACTAGAAGAAGATTCCTTCCGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTTGAACTATCAATCCCTGAGGTACCGCAATCATTCTTCTCTCCAGTTGTTAAGTTTCTTTTCCCTCTCCTCTTGTATGTTTCAAATACTTATTCTGTATAAGTTTGGTTGGTGGTGGTGCAGACATTGGATCTCCTAGACCTGTGTGAGCAAGCAGGTTCAGCATCATAAGCTAATCAACAATGAGAAGCTTATGCAGCACACTAAATGGCGAATGAAGAGGGCTCAATGGTTCCTGTCAGCTAAGGCTAAGACACAGATTTTTCAAAGAGCGCAAGCTTAGGATGAATCTGCTGATCAAGCAGGGAGAATAGTGAGTTTGGTGAGTGGGGGCTGAAGCCAAAATAAGGGAAAAAAAATATTTGTATCTTCTTGTATTGTTGTATTGTATCATCAGACAAAGGTGAGTAGATAATGTAATAGTGAATGATAGAGCCATATATATGGATAAAAAAATGCAGCCATATTTTAGGCTTGTGTGTTTCTTTCTTATCAAAGACTTTTATGGGTTGGTGCAACACAACAGGCACTGTTATGTTCTTTCTATTATTAGCTTGAAAGAAAAAAAAGTAATGAAAAATTAAGAGATTTGGATATTGAACTATTATTTTTAATTTAGTCTTTGTTAATGTGTATCAGCATTTGGAAGGAAAGATGTAAAATGCATAGTCAAATTTCAAAGCA CTTCATATAAAACCCCCTTCTTTCTCTCTCACAAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTCAGGGATCTTCATTCATTCATTGATATCACAATCAAGTGCTGCAATATGGATGGTTCATATAGCTTTTGGCAATTGGGTGATGAGCTGCGAGGTCAGACAAAAGTCTCTGAAGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACCAGATCAAAGGGGGAGCGCATGAATAACCTTGATTTTTCAAAGAGCACTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAGAGTTTCAACTTTAACATGTTGAGCTTGGATTCAAAAATGACCGACCCTGTTAACAAAAGTTCATTGAGGAATGGAATTTACAACATGAATGCAGTTTATGTGAAAAACAATACAAATGTTGCTGGAAATTTACCTGGTGCTAAGTTCAGTGGCAATGATTATATCAACAAAGATCTTACCAATTACAGTAGTACCAACAATAACGTTGGTGAAAATGCTAACTCCATCAATGCAATTGATAAAAGGTTCAAGACATTGCCAGCAACAGAGACACTGCCCAGAAATGAAGTTCTTGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAAGAAGACTTAAAGAGGCAACTTTTTGGTTTGCCTCCAAGGTATAGGGACTCGGTGCGTGCAATAACTCCAGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGGATTTTTGAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCGACTGCTTGGGAAGACAAGAAATGTAAAGGTGAATCCAGGTTTCCGGCTCAGGTAGAGTCTTGTATGCAGTATTCCATTTTCTTGTGCTCCTGTTTGTAG LHIKPPSFSLTNSGSLNLGLLTLRDLHSFIDITIKCCNMDGSYSFWQLGDELRGQTKVSEDHKWLWAASKLAEQTRSKGERMNNLDFSKSTLDARPREKFGFQEDNKFESFNFNMLSLDSKMTDPVNKSSLRNGIYNMNAVYVKNNTNVAGNLPGAKFSGNDYINKDLTNYSSTNNNVGENANSINAIDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVESCMQYSIFLCSCL Homology
BLAST of Cucsat.G15685.T7 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 3.3e-55 Identity = 136/287 (47.39%), Postives = 166/287 (57.84%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.4e-53 Identity = 120/213 (56.34%), Postives = 145/213 (68.08%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 2.3e-53 Identity = 134/310 (43.23%), Postives = 173/310 (55.81%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 4.0e-53 Identity = 102/128 (79.69%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. NCBI nr
Match: XP_004145666.2 (uncharacterized protein LOC101215772 [Cucumis sativus] >KGN58174.1 hypothetical protein Csa_017566 [Cucumis sativus]) HSP 1 Score: 597 bits (1538), Expect = 9.31e-214 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. NCBI nr
Match: KAG6581097.1 (hypothetical protein SDJN03_21099, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 518 bits (1333), Expect = 3.91e-183 Identity = 246/264 (93.18%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. NCBI nr
Match: XP_008450102.1 (PREDICTED: B2 protein [Cucumis melo]) HSP 1 Score: 511 bits (1315), Expect = 6.97e-181 Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. NCBI nr
Match: KAA0042911.1 (B2 protein [Cucumis melo var. makuwa] >TYK05313.1 B2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 511 bits (1315), Expect = 2.23e-180 Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. NCBI nr
Match: XP_038897034.1 (B2 protein [Benincasa hispida]) HSP 1 Score: 508 bits (1307), Expect = 1.15e-179 Identity = 246/253 (97.23%), Postives = 250/253 (98.81%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. ExPASy TrEMBL
Match: A0A0A0LB43 (DCD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585860 PE=4 SV=1) HSP 1 Score: 597 bits (1538), Expect = 4.51e-214 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. ExPASy TrEMBL
Match: A0A1S3BP62 (B2 protein OS=Cucumis melo OX=3656 GN=LOC103491791 PE=4 SV=1) HSP 1 Score: 511 bits (1315), Expect = 3.37e-181 Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. ExPASy TrEMBL
Match: A0A5D3C009 (B2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001340 PE=4 SV=1) HSP 1 Score: 511 bits (1315), Expect = 1.08e-180 Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. ExPASy TrEMBL
Match: A0A6J1F9B6 (B2 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111442004 PE=4 SV=1) HSP 1 Score: 494 bits (1272), Expect = 1.29e-174 Identity = 236/253 (93.28%), Postives = 248/253 (98.02%), Query Frame = 0
BLAST of Cucsat.G15685.T7 vs. ExPASy TrEMBL
Match: A0A6J1J1D1 (B2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111482521 PE=4 SV=1) HSP 1 Score: 494 bits (1271), Expect = 1.83e-174 Identity = 235/253 (92.89%), Postives = 247/253 (97.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|