Cucsat.G15661.T11 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAACCCCTTAACTCATGTTTGAAAACCTGAATTAAATTTCATGTTGACTCCATGATCACTCATGAAAAGTCATAAATCCATACACATTTGGCCTCATCAATCCTCTAATTTCTAAGATGAATTCTTGTGGCTCATAACAATTCAAGAAAAATGCAATCAATCTTTGCATTAGGCTTCTCCCAATCTCTCCAATTTCCCCATTCCCATTCCCATTTCCACTCCAACTCCAGAATTTCTGTGCAAAAGCCTCACTGCAGCAGCCATGGAAGCAAGAAGCCCAGAATAAGCCTCTCTCTTAGAACCACTTGGCCTTCCATCTCCATCTCCCTCTTCGCCTCTGGATTTCTCTTAGGCCCTCTTCTCGATGGACTCCATTCTCGCGTTAATCTCGTCGTTTATCGAACAGGATCCATCCACATCGGCCCTCTCCATACTAACATCTGGGTAACATTTTTTAATCTCCATTCTAGAACCCTAATACTTTCCGGACTTTTTTTTCCCCCTTTCCATAGGGTACTTGATGATTGAATCTGAATGAATGCTATTAGGTTCCTTTCTTGCTGGGATTGTTTTACTGTACAGTTGGTTTGATTCAACTCTACTTAGATGAGAAATTTTCGCTAAAACAATCACAGGGGAGCTTGGGGAAAACGGTAGCTTCCTTAATGTGAGTGTTATTTTTCATTGGATTTCTCTGGAGAAAGTGTTGCTTGTTTGATTCATATGTATGTATTGTTTGACCAGAGCATTGGGCTTGTTTATTGAATTGAGTGCTGAAATGTACAAAGCTGGAGTGGCTGATAATATTGAGGCCTATGCATTGTTTGCTGGGGCTGAGTTTATATGGGCATTGCTTGATAGTTCTTTGCTTGGATTCTCACTGGCTTGTGTTCTTGGCCTTGGTTGCCCTCTGGCTGAGATTCCCATTATGAAGTATGTGAACCTCATCCTTTTCAATTCATATACTAATAGATTATCATAAGTATTGGTTGGTTGTATTATTTTGGTTCTTGTACTCTCTCATGTGATGATTTGTAGGCAGAAGTTAGTTCCCTTATTTAGAAATTTGGTTATTAGTGAGATGCAGAAGTTAGTTCTCCAGTGCTCGTATACTAGTAGTTTATGATATGCATTGTATTGGTTTGTTTAAATTTTAAATCATAATTATAGATTTTCCTTATTGTACATTCTTATGTGATGATTTCTATGCAGAAGTTAGTTCTCTAATGTTAGAAGTTTAGTTGTTGATGAGACATAGGAATGAGTTTATACTTGGACATATATTTGAGTTTGGATTATAGAGTGGTTTATCTAATGTACCTTATTCACTTGGCCTAACCTCAAATACACAAGTTGGCAATTGATGAGATTTTAAATGATAATTTGAATGCCAAGAATTTAGGCTCTATTTCATAACTATTTATTTTTTACTTTTTGTTTTTTCAAAGATTTAAGTAAATAAATACTACTTCCACGAAGATTGAAACTTCATGGCACTTTTATAAAAAGAACATTCAACCATTTGCAACTAACATGTTTAGGTACTGCGGATTTTACCATAGAAACCAATTATAGTTAACTCAAGTCAGTTTACAGAAAATCAGTGAGGTGTTCAACTGACAATTGATTCGGGAACCAAAATTTCCACTTCGATCCTGTTTTTTGCTAACACAACGCTACTCTACTCCTTGATGTAATGCTTGTGCAGGTTCTTCCATCTCTGGGAATATCCCAAAGCCAACTTAGACATATTTGGTGAAGTAAGTGATGAAAATCAAAGACCAGAAAGTGATGGGAAAGTGCAAGAATTCTTTTCCAGATTTTTTTCTTAATCTTGCATTTGTGTAATACAGGGGATAATCAGCTGGACGGTCACTTGCTATTTTGTGTACACTCCATTCTTGATTAATCTATCAAGATGGCTCAAGTCCGTGGTGGATGCTGCTGCTGTAAATGAAGATGAATCTGGATAGCCAAATAGATGGGAAGGATGGAACTGGAAAGGTAACGCTTGCTTTTATATAACCTTTTTGATTTTTTACTTATAAACACTGCTATTTATAAATTTCTTTGTTTTGTATACTGTACCGTCTCTTTTGTAGTTTTCAATGCTTAGATTCAATTTTATAGAATAGGGTATAAAATGGAGCATACATTTAAGTAACAACGATATTAGAAACAAATGGGACATTTGAGATGAGAAGTAACTTATAGTGTTATAATAGTAGGAGATTATAATAATTTGGGTTTGGGATGTAGATTATTAGTATGTGATATTATAATCTATGTTCATGCTATTATAATGTGTTATTATAAATTGTGTTTGAGTGCATACTATTATGTCAGAGTTTTTGACTACTTTTTTTCTTTACATATATATAAAACGTACATTTTTCTTAAATTGATTTTATTAAATATTTTTAAGGGTTCTTTTAATAATAATAAAAATGCAATTTATTTACTATATGACAAAAAGATCACTGCAGGACAAAAACTCAGGGTATATGGTTTTGCTCCTTTTAGCATTTTTTTAATGATGATATTTATTTCATAAATTTAATTCCAATCTTGGTTTTTCACTATTTTTTTTTTGCGCATATATATATATATATATATATATATTTATTTATAGTACATCAAATAAAAAACTTCTTACTTACGAGGAGGATTGGACGAAACATGGGAAGGGATTAAGGGATTAGAAAATAAAAGTGATCAAACATACTATAGCATTTCAATTTTAAAATCAAAAGAAGTATTGTAAGAAATTTGAAAGGAATTCTACATAAACTCAAAGGCAAAGCTAATAGTCAAAAACGTAATTTCATCCCATTTTGAAAAAGATCCAATTATTCGATGTAAACAACATGAAATAGCCAAGTCTTGTTGACGGAGATTGTCATGTGCTTCGATGACTATGATGTCACCCTTAAACATTGCAATAAAGCAAGATCCAATTGTGCTAGAAGCTTTAGCCACTTCTTATTTAGGGCCATATTATGAAAATCCTAGGATATTAGGGTTTCCATAATTCCTCAACTCCCCCTAAATCTCTCCATAATCCCCCATGACCTGTTTCTCACTCCCCCTCATTCAGTTGTAATCCTTCCCCAAGACCCCCTTAATCCCTTCCTATTTCCATCCAATCGTCCTCGGTTTCTTCCTCTTTCTTCATTTTCCGCTCTAAATCTCAGTTATCTTTTTCGTAATTTTCAGGTTTTTGAGTCAGTAGAAATCATTGGCCATTCTCACGACTTAGGGACATTTTTCTTTGGTATCGGTGAAGGGAGGAAATAACATCACTTGGGAAATAACTTGAAAATTTTCCAAAAATAGGCTAAAAATGGAGAGATATAAGAGCCCTTCATGTTCATCTCCTCTTCTAAATACTATTTTTATTAACTTATTTAAATCTATGATAGTTGTTGGGTGTTGCCTATTAGAAAGTTGAAACTAGTTAGCATTCCATAGGATCTTTTGTAAATTGAAACTAGGTAGGATTGAATAGCATCAATTTCTTTTCTAAAAGTGGAAGATATGGAGTTGTAGTTTGGACTATATGTGTTGAATCCTTTGATTGGTAGGCATTCCTCTTACTAGTAATTCTATAGGCTTGTTGGATAGGCTTGGAATTGTTTCCACTAAAATTGATTGTACTTTTCTTTAATACCAGTTAGCCTATGATTTTATGGATGGGTAGCCTTTTGTCTGAATTGCCTCATCATGTGTCGTCAGTAGTCTTGCACTTCTTAGAAATTTCAATTTCAGTTTATCCTATAAATTGCTATGTTATTTTAGAGCTTCTTAAAGAGACGTCGAGCAGCCTTGTTAGTAGAAACTTTGTTACATGTTTTTAGTATTTGTTTGGGTGAGAAAGATTCTTTAAAGAAAAATGCAACTTTTATATATGTCTAGGAATCGTTCAAGGTGTTACAATATATGTTTAGGAGTGCAAACAATTTAAGTTTGGTAAGCTTCCTATGTATTTATGTTTTATCTCGTACACATCTTGCATATTCCAATCTTTCACCATGCGTCTTGAAATCAAGTTGCTACTCTTCCTAAGCCATTTGGAGTGTTTCTATGCATGTTTACTAAGTTTATTGTGTTCTTATGTTTTATCCCACACCTATCATACTTACACTATGGGTTTCAAAATAAAATTGCTATCATTCCTAAGCTATCTAGAGTGATTATATGCATGTTTAGTAAGTTTATTAGCCTCTTATGTTTTATCTCGCACATTTCAAACTTTCAATATGAGTTTCAAAATGAAACTACTACTCCTCCTAAGCCAGTTAGAGTGATTCTATACATGTTTAGCAAGTTTGTTCAGACTTATATTTATATTTGTATGCATGTTTAGTGATTCTACACCTCTACTACTATAAATTTAGTCTTTTTGACGCATACAAATTTTGACTTCTTGATGGTAATGGCAAAGGACCATTAAGAATTTTTTTCTTTTTGATACAATGTTTATCTTGACAGTCATGTACATTAAGAAAAGTTTCCTTATTTTGTTGAAGAAATACGAAAAAAAAAACGTAAAAAAAAATATAGATTTTTTATTTCCTTGATGGGCAAAGTTTCATTAGTTTTGTTGATGAGCAAAACTATTTCTTGATAGATAATAAGCATCAAAGATAATATATTAGTTGACTGACAATGCTCATCAAGTTAGATAGACTTTCTTGATGAACGAGGTCCATCAAGGAATGATTTTTCTTGATTTGCAATAGCCATAATCGAAAAAAAGTTAACATATTTGTTTTGGATTTCTTAATGGGTTTAGAATTTTCTTGATAGTTCTAGGGTTTCTTGATAGACAAGAAAAAAAATTATGGGCAAGGTCCATCAAGAAGAATGATATTTTGATGACATTGTCCATCAAGAAAAAATTTATAATTTTGGCTAAGATAAGATCATGGGTAAGACCGATAAAAAAAATGATATTATTGATAGACATTATCCATCAAGAAAAAACTATTTTCTACGAAGCACGAAATTTGGACCCTCAATAGATTCAAAAAACACGATATTCATCAATAATATTCTTAAAGTTTTATTATTTTTTTTCCAATTATTACTTGTCCATACGTAAATAATACAATATTATTTTTTAAAGAGTTAACTGTTATAATTATAATTAGATTGAAATAAGTGATTTTATCAAAATTAAATTAGTTATTGTATTCAACTTTAATGAGTTGAATTGAAAGTTTGTAATTTATGGTTTTTTAAATTTGTAGAAGTTGTAGAACATGAACTTAGCTTAACTAGCACCTGTATATATTAATTTAAATATCAATTTTATAATTGTTAGTACAATCTTCATTGAGAAGGAAATCAAGATCATGAAGATGCCAATTAGCAGGAACTTAAGGTGGGTGTGAGAAAATAAAAGGAAATAGAAAAAAGAACAGATTTTTTATTACATGTTTTGACCATCAAGAAAACGATTTTGTTGATGGGCAAAAAATCAAAGTCTCATTTCTTGATGGTATTGACCATCAAGAAAGAGTTTTTGATGACATGTTTTGACCAAACTAGTTTTCTTGAAGGTTGGACTTTCTTGATGTCTGCTACTTGATGGATAAAGACTATCAACGTAGACATTTTTTTGACGTGTTTTGTATATGAAGAAGACCAAATTGGTAGAAATGCTTCCTTATAT ATGCAATCAATCTTTGCATTAGGCTTCTCCCAATCTCTCCAATTTCCCCATTCCCATTCCCATTTCCACTCCAACTCCAGAATTTCTGTGCAAAAGCCTCACTGCAGCAGCCATGGAAGCAAGAAGCCCAGAATAAGCCTCTCTCTTAGAACCACTTGGCCTTCCATCTCCATCTCCCTCTTCGCCTCTGGATTTCTCTTAGGCCCTCTTCTCGATGGACTCCATTCTCGCGTTAATCTCGTCGTTTATCGAACAGGATCCATCCACATCGGCCCTCTCCATACTAACATCTGGGTTCCTTTCTTGCTGGGATTGTTTTACTGTACAGTTGGTTTGATTCAACTCTACTTAGATGAGAAATTTTCGCTAAAACAATCACAGGGGAGCTTGGGGAAAACGGTAGCTTCCTTAATAGCATTGGGCTTGTTTATTGAATTGAGTGCTGAAATGTACAAAGCTGGAGTGGCTGATAATATTGAGGCCTATGCATTGTTTGCTGGGGCTGAGTTTATATGGGCATTGCTTGATAGTTCTTTGCTTGGATTCTCACTGGCTTGTGTTCTTGGCCTTGGTTGCCCTCTGGCTGAGATTCCCATTATGAAAAAATCAGTGAGGTGTTCAACTGACAATTGA MQSIFALGFSQSLQFPHSHSHFHSNSRISVQKPHCSSHGSKKPRISLSLRTTWPSISISLFASGFLLGPLLDGLHSRVNLVVYRTGSIHIGPLHTNIWVPFLLGLFYCTVGLIQLYLDEKFSLKQSQGSLGKTVASLIALGLFIELSAEMYKAGVADNIEAYALFAGAEFIWALLDSSLLGFSLACVLGLGCPLAEIPIMKKSVRCSTDN Homology
BLAST of Cucsat.G15661.T11 vs. NCBI nr
Match: XP_004150901.1 (uncharacterized protein LOC101205226 [Cucumis sativus] >XP_031739074.1 uncharacterized protein LOC101205226 [Cucumis sativus] >XP_031739075.1 uncharacterized protein LOC101205226 [Cucumis sativus] >KGN58127.1 hypothetical protein Csa_017408 [Cucumis sativus]) HSP 1 Score: 392 bits (1008), Expect = 1.66e-136 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Cucsat.G15661.T11 vs. NCBI nr
Match: XP_008447464.1 (PREDICTED: uncharacterized protein LOC103489906 [Cucumis melo] >XP_008447465.1 PREDICTED: uncharacterized protein LOC103489906 [Cucumis melo]) HSP 1 Score: 369 bits (946), Expect = 5.71e-127 Identity = 192/203 (94.58%), Postives = 195/203 (96.06%), Query Frame = 0
BLAST of Cucsat.G15661.T11 vs. NCBI nr
Match: XP_038904924.1 (uncharacterized protein LOC120091134 [Benincasa hispida] >XP_038904925.1 uncharacterized protein LOC120091134 [Benincasa hispida] >XP_038904926.1 uncharacterized protein LOC120091134 [Benincasa hispida] >XP_038904927.1 uncharacterized protein LOC120091134 [Benincasa hispida] >XP_038904928.1 uncharacterized protein LOC120091134 [Benincasa hispida]) HSP 1 Score: 340 bits (873), Expect = 7.69e-116 Identity = 178/203 (87.68%), Postives = 189/203 (93.10%), Query Frame = 0
BLAST of Cucsat.G15661.T11 vs. NCBI nr
Match: XP_022157000.1 (uncharacterized protein LOC111023831 [Momordica charantia]) HSP 1 Score: 300 bits (768), Expect = 5.14e-100 Identity = 161/201 (80.10%), Postives = 173/201 (86.07%), Query Frame = 0
BLAST of Cucsat.G15661.T11 vs. NCBI nr
Match: XP_022949544.1 (uncharacterized protein LOC111452860 [Cucurbita moschata] >XP_022949545.1 uncharacterized protein LOC111452860 [Cucurbita moschata] >XP_022949546.1 uncharacterized protein LOC111452860 [Cucurbita moschata]) HSP 1 Score: 298 bits (764), Expect = 2.16e-99 Identity = 163/202 (80.69%), Postives = 176/202 (87.13%), Query Frame = 0
BLAST of Cucsat.G15661.T11 vs. ExPASy TrEMBL
Match: A0A0A0LBT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535110 PE=4 SV=1) HSP 1 Score: 392 bits (1008), Expect = 8.05e-137 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Cucsat.G15661.T11 vs. ExPASy TrEMBL
Match: A0A1S3BI47 (uncharacterized protein LOC103489906 OS=Cucumis melo OX=3656 GN=LOC103489906 PE=4 SV=1) HSP 1 Score: 369 bits (946), Expect = 2.77e-127 Identity = 192/203 (94.58%), Postives = 195/203 (96.06%), Query Frame = 0
BLAST of Cucsat.G15661.T11 vs. ExPASy TrEMBL
Match: A0A6J1DRY1 (uncharacterized protein LOC111023831 OS=Momordica charantia OX=3673 GN=LOC111023831 PE=4 SV=1) HSP 1 Score: 300 bits (768), Expect = 2.49e-100 Identity = 161/201 (80.10%), Postives = 173/201 (86.07%), Query Frame = 0
BLAST of Cucsat.G15661.T11 vs. ExPASy TrEMBL
Match: A0A6J1GD48 (uncharacterized protein LOC111452860 OS=Cucurbita moschata OX=3662 GN=LOC111452860 PE=4 SV=1) HSP 1 Score: 298 bits (764), Expect = 1.05e-99 Identity = 163/202 (80.69%), Postives = 176/202 (87.13%), Query Frame = 0
BLAST of Cucsat.G15661.T11 vs. ExPASy TrEMBL
Match: A0A6J1KGW6 (uncharacterized protein LOC111493103 OS=Cucurbita maxima OX=3661 GN=LOC111493103 PE=4 SV=1) HSP 1 Score: 288 bits (736), Expect = 1.95e-95 Identity = 159/202 (78.71%), Postives = 173/202 (85.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|