Cucsat.G15648.T4 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G15648.T4
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptiontranscription termination factor MTERF9, chloroplastic
Locationctg2009: 4646605 .. 4649843 (+)
RNA-Seq ExpressionCucsat.G15648.T4
SyntenyCucsat.G15648.T4
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGATTCTCTGTCTCTCTGTTTAGGGTTTTTCGGTATATTCTCTTTCTCTCTTATCCGTTTCCTTTCCTTCTAAAATGGCTTCTCTCTCCCTCTTCTCTTTCTCTCCCACTCTTCACTCTCACTTTCCATCTTCTTCCGATTTCTATTTACCTTCCCAATTCCTACTCACTTCTTCGTTTGGTAGTCGGAGTAGGAGGAGGAATGTGCCTCGGTTTGTCGTCCGGTCTACTCACTCCAGTGCTGCCATTCTTAAGCCCAAACGGAGGTCGAGATTTGGTCGGACTTTGTCCCCTTTTGATAGCGATGAAGATGGGTATGATGTGGATGAGTTTAGCAGTGATGGGGATGATGATGATGCTTGGCCGGATAATGTGAGTTCTGAATTCCCTTTGTTTTGGTTTTCTTTATGTTCTTGTGCTTTCTGGTTGATTGAATGTGGGTTTGTGATTTTGTTTATTTTTTCATTTTCATTGTTGGGAAGTGGTTGAATTGATTGTTTTTGTGATGAGAAACTTGACTGTTCAGTGATAAGCGAAGAGTAGATAAAAGAAGTATTTGAAACTGTCGTTACACTGAATTCAGATAACATAGTTCTGGCCATGGATAACCAATGGAGTGCATGAATTTTTTATATCTTGTTTTGACTGGGTAATGAAAAAGAGAAGTTCGAGGAAATTTTAGCTTTCGTTTTCATGTTATTGCTTCATTTCTGTTGGGGTTTTTCATAGAGGATTCCTTGGTTTTTTTTTCTTTTTTTTTTGGTTTTAGTTCTTTATGCATTCTGCAGACGGTCATTGAGAATCTCAACTTTTTACTGTCTGTGCACTGTGGGATTTTCATCTTCTAGGGTGATTTCTCGGATGTTGAATATGATGCCAAAAGAAAGAGAGCCAAGTTACAAAGCAAAACCAGAAATAACAACTCACAGCGAGGTTATCTTTTGTTGTTTATATAATCATTCTCCTAAAGGAGCGATCAATTTACTCAGCATACTCTTCTTGTGCAGATAACGTGAGACATCCCAGAGAAAGCAGGGGTATAAAATCCTCAAATGATGGAAAGAGTTTTAAAGTTAAGAGTAACCACCTTGATTTTCAAGATATCACAAATGATACTGTAAAACATGACTTCAATATTGATGAGGAAGTTTGTTCTACCAATACAGGCAGGAAAGGAAAGGTGGGTTCGTAAGTTTCCAACATTATTAACACTTTCAGGTTGCTTAAGTGAATGTTGAATTTACGTGTGTTTCCATTGATTCAGGTGATGACCAAGAAGTCCATGGAAATTAGATTTCCTCGTCTGGCAGAAGAAATAGATTTGGACGAGAAATGGTTTCCTCTGCTTAATTATCTTACAACATTTGGGCTCAAGGAATCACATTTTCTCCAAATGTATGAGAGACACATGCCTTCTCTTCAAATAAATGTTTATTCTGCTCAAGAAAGACTAGAATACTTGTTAAGTGTTGGTGTCAAACAAAGGGATGTTCGAAGAATACTCTTGAGACAGCCCCAAATTCTGGAGTACACAGTAGAGAACAATTTGAAATCCCATGTTGCTTTCTTACTTAGTTTGGGAATCCCAACTTCCAGAGTGGGGCAGATCATTGCTGCTGCTCCATCTCTATTTTCTTATAGTGTTGAGAATTCATTAAAACCCACTGTCCGATACTTGGTTGAGGAAGTTGGCATCCAGGAAAAGGACCTGGGTAAAGTTGTGCAACTGAGTCCTCAAATTCTGGTTCAACGGATTGATACTTCATGGAACACCAGATATATGTTTCTTTCAAAAGAAATTGGAGCTCCTCGAGATAATGTAGTGAAGATGGTAACTAAACATCCTCAACTCCTCCATTATAGCATCAACGATGGTTTACTACCCAGGATCAATTTCCTTAGAAGTATTGGAATGCGAAATTCAGAGATCTTGAAAGTCTTAACTAGCCTTACACAGGTAATTTGCGTTTGTTTCTATTTTAGTCAGTATGTTCTCAGAAAAATATATACCCTCATGGAAATGGTTGTATTCTTCTTGCCTCGTAAACTTTTTCTTGCTGTAAGAGGTTGTATTCTTTACATCTGTTTGTTGCCTCGTCATCTTGGCTGCAAGCTTCGAATGCTTTTAGTACTTTCTTCATAAATTATATTCTTGTCTTATGTCCCTTAACCAGATCTGTTGATACTACAGGTCTTTTCTCTGTCTCTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAATGAACTCCGTAATGAAGTGAAATCACTGACCAAGTATCCCATGTATCTAAGCTTGTCCTTGGATCAGAGAATTCGACCTCGACACCGGTTCCTAGTTTCTCTTAAGAAAGCACCCAAGGGTCCGTTCCCTTTAAGTTCCTTTGTTCCAACTGATGAATGCTTTTGTGAGCAGTGGGCTGAAACCAGCCTAGATAAGTATCTTGAATTTAGGAAGAGATTACTATTGAAGGAGTTTGCGGAGAAATATGAAAGAAGACGATAACATAATTATCGTATTACTCCAAAGTGAAATGACTTGATTGCACCTCGGGGTTCTTCCATCTACTAACTTGAAGTGAAGGTATGGCGTGAATGTTCTGGTTGCGATGCAGGGCGTTTATGAACATAAATTTTGCCATTCTTTTGTCGTTCTGGTAGCCATACTCAGATTATGAACTACTCCAGTTTAGAGTTCAATGACAGCTGAAATTCTTTGGCAAGACTAGAGATGGAATTCTTACCTGCCATGTCTCTGCATGGTCATTCAAAAGGTGGTGAGCTATTAGCAGTCGCATGCTCTCACTGAAAGGTCTCGTTTGAAACTTATAACAGAACTCTTTGTAAATCTTTTGAAAGATTGGGGGAGAAGCATTGTATAATGAGCATACATATTCCAGGTGATTTGGTCTTTCTGTGTCCTGAAAGTTGTAATCGATACCAATTTTGGTTCTTAAATATTGTAATTGACAAAAATTTTGGCCTTTCACAAGCGGGAATTCACTGTTTTTTCTTCTTTCAAAACCTTTTTTTTTCTTATCGCTTGCTCTGCCACCTCGAGCCATTGTATGAACATGCAGGAGGTGTTCTTACCTAAGCGTGTGTAGACCAGGAGAGAGCACTTGAACATTTTCAATTGTAGTATATTCACTGTATGAAATAGAGTTTGACTGAACCTTGATGGACGGAGAAGCTGCTCCTCCATCAGTGATAATAAGGTATACAGATACTTGG

Coding sequence (CDS)

ATGACCAAGAAGTCCATGGAAATTAGATTTCCTCGTCTGGCAGAAGAAATAGATTTGGACGAGAAATGGTTTCCTCTGCTTAATTATCTTACAACATTTGGGCTCAAGGAATCACATTTTCTCCAAATGTATGAGAGACACATGCCTTCTCTTCAAATAAATGTTTATTCTGCTCAAGAAAGACTAGAATACTTGTTAAGTGTTGGTGTCAAACAAAGGGATGTTCGAAGAATACTCTTGAGACAGCCCCAAATTCTGGAGTACACAGTAGAGAACAATTTGAAATCCCATGTTGCTTTCTTACTTAGTTTGGGAATCCCAACTTCCAGAGTGGGGCAGATCATTGCTGCTGCTCCATCTCTATTTTCTTATAGTGTTGAGAATTCATTAAAACCCACTGTCCGATACTTGGTTGAGGAAGTTGGCATCCAGGAAAAGGACCTGGGTAAAGTTGTGCAACTGAGTCCTCAAATTCTGGTTCAACGGATTGATACTTCATGGAACACCAGATATATGTTTCTTTCAAAAGAAATTGGAGCTCCTCGAGATAATGTAGTGAAGATGGTAACTAAACATCCTCAACTCCTCCATTATAGCATCAACGATGGTTTACTACCCAGGATCAATTTCCTTAGAAGTATTGGAATGCGAAATTCAGAGATCTTGAAAGTCTTAACTAGCCTTACACAGGTCTTTTCTCTGTCTCTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAATGAACTCCGTAATGAAGTGAAATCACTGACCAAGTATCCCATGTATCTAAGCTTGTCCTTGGATCAGAGAATTCGACCTCGACACCGGTTCCTAGTTTCTCTTAAGAAAGCACCCAAGGGTCCGTTCCCTTTAAGTTCCTTTGTTCCAACTGATGAATGCTTTTGTGAGCAGTGGGCTGAAACCAGCCTAGATAAGTATCTTGAATTTAGGAAGAGATTACTATTGAAGGAGTTTGCGGAGAAATATGAAAGAAGACGATAA

Protein sequence

MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Homology
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BLAST of Cucsat.G15648.T4 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 6.4e-153
Identity = 266/333 (79.88%), Postives = 304/333 (91.29%), Query Frame = 0 

Query: 2   TKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQER 61
           ++K +E  +PRLAEEID+D K  PLL+YL+TFGLKESHF+QMYERHMPSLQINV+SAQER
Sbjct: 163 SRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQINVFSAQER 222

Query: 62  LEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPSL 121
           L+YLLSVGVK RD++R+LLRQPQIL+YTVENNLK+H++FL+ LGIP S++GQI+AA PSL
Sbjct: 223 LDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSL 282

Query: 122 FSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGAP 181
           FSYSVENSL+PT+RYL+EEVGI+E D+GKVVQLSPQILVQR+D +WNTRYMFLSKE+GAP
Sbjct: 283 FSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAP 342

Query: 182 RDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNLK 241
           RD+VVKMV KHPQLLHYSI+DG LPRINFLRSIGM NS+ILKVLTSLTQV SLSLEDNLK
Sbjct: 343 RDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLK 402

Query: 242 PKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTDE 301
           PKYMYL+NEL NEV  LTKYPMYLSLSLDQRIRPRHRFLV LKK  KGPFPLSS VP DE
Sbjct: 403 PKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGPFPLSSLVPNDE 462

Query: 302 CFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 335
            FC+QWA TS+D YL FR+RLLLKEFA KY++R
Sbjct: 463 SFCQQWAGTSVDTYLAFRQRLLLKEFANKYDKR 495

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BLAST of Cucsat.G15648.T4 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.3e-22
Identity = 61/223 (27.35%), Postives = 118/223 (52.91%), Query Frame = 0 

Query: 59  QERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAA 118
           ++++ YL   G+   +V R+L  +P ++  ++E   K  V +   LGIP   + +I+   
Sbjct: 353 EKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVK 412

Query: 119 PSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEI 178
           P L+   +E ++ P VR+L +E+GI  + +G ++   P +L   +        +FL    
Sbjct: 413 PILYCIDLEKTIAPKVRFL-QEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRA 472

Query: 179 GAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLED 238
           G  + ++ K++   P LL  SI   L P + +  S+G+R  ++ +++     +   ++ D
Sbjct: 473 GVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNV-D 532

Query: 239 NLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLV 282
           NL+PKY YL   +   ++ L ++P + S SL++RI PRH  +V
Sbjct: 533 NLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMV 573

[Close]
BLAST of Cucsat.G15648.T4 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.4e-21
Identity = 67/252 (26.59%), Postives = 126/252 (50.00%), Query Frame = 0 

Query: 38  SHFLQMYERHMPSL-----QINVYSAQERL----EYLLSVGVKQRDVRRILLRQPQILEY 97
           S+ + + ER +P +     +I      ERL    E L S+G   R+V   + + P IL +
Sbjct: 49  SNIVGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSH 108

Query: 98  TVENNLKSHVAFLLSLGIPTSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDL 157
           +VE  L   +AF  +LG+P +++G++I   P L SYS++  L   V +L      Q+  +
Sbjct: 109 SVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMI 168

Query: 158 GKVVQLSPQILVQRIDTSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRI 217
           GKV+  +P ++   +D        FL   +G   D +  +V   PQLL   +N  L P  
Sbjct: 169 GKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNY 228

Query: 218 NFLRSIGMRNSEILKVLTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLS 277
           ++L+  G  +S+I  ++T   Q+   S++++L+P+  +L+  +   +  +  YP +    
Sbjct: 229 DYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHG 288

Query: 278 LDQRIRPRHRFL 281
           L +++  R + +
Sbjct: 289 LKKKVESRFKLV 300

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BLAST of Cucsat.G15648.T4 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 5.8e-21
Identity = 64/223 (28.70%), Postives = 116/223 (52.02%), Query Frame = 0 

Query: 59  QERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAA 118
           +E+L YL  + V   D  + L   P +    + +++ S    L S G+    VG+I+   
Sbjct: 34  REKLIYLQDLNV---DPHKALRVNPSLRSAPI-SSVVSVETLLSSTGLSRPAVGRILDMF 93

Query: 119 PSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEI 178
           P L +   E+ + P +R+L  E+ I E+D+ K +   P++L+  +D        FL    
Sbjct: 94  PDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLG 153

Query: 179 GAPRDNVVKMVTKHPQLLHYSINDGLLPRINFL-RSIGMRNSEILKVLTSLTQVFSLSLE 238
              RD +    +++  LL  ++   L+P+I +L   +G    E+ K++     + + S++
Sbjct: 154 FVGRDTI---TSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVD 213

Query: 239 DNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 281
           +NL PK  + I E+R +VK L ++P Y S SL+++I+PRHR L
Sbjct: 214 NNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLL 249

[Close]
BLAST of Cucsat.G15648.T4 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.9e-20
Identity = 66/293 (22.53%), Postives = 136/293 (46.42%), Query Frame = 0 

Query: 25  PLLNYLTTFGLKESHFLQMYERHMPSLQIN-VYSAQERLEYLLSVGVKQRDVRRILLRQP 84
           P+L+YL   G+++     +  R+   L  + V      ++YL  + V+  DV R+L R P
Sbjct: 146 PVLDYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYP 205

Query: 85  QILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGI 144
           ++L + +E  + + +A+L+ +G+   +VG +I   P +    V   +KP V +L E +G+
Sbjct: 206 ELLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHL-EGIGL 265

Query: 145 QEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDG 204
           Q   + ++++  P +L   ++         L  E G  ++ +  +V ++P +L   + D 
Sbjct: 266 QRLAIARIIEKKPYVLGFGLEDKVKPNIEAL-LEFGVRKEALAFIVAQYPDILGIELRDK 325

Query: 205 L------------------------------------LPRINFLRSIGMRNSEILKVLTS 264
           L                                    L  +NFL S G   S++ K++ +
Sbjct: 326 LATQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLKHVNFLTSCGFLLSQVSKMVVA 385

Query: 265 LTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 281
             Q+ +L++ D +K  + Y  NE+  +++ L ++P + +  L+  +RPRH  +
Sbjct: 386 CPQLLALNM-DIMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHEMV 435

[Close]
BLAST of Cucsat.G15648.T4 vs. NCBI nr
Match: XP_004151387.1 (transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KGN44058.1 hypothetical protein Csa_015466 [Cucumis sativus])

HSP 1 Score: 655 bits (1689), Expect = 6.92e-234
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE
Sbjct: 187 MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 246

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS
Sbjct: 247 RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 306

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA
Sbjct: 307 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 366

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL
Sbjct: 367 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 426

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD
Sbjct: 427 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 486

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 335
           ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Sbjct: 487 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 521

[Close]
BLAST of Cucsat.G15648.T4 vs. NCBI nr
Match: XP_008462974.1 (PREDICTED: transcription termination factor MTERF9, chloroplastic [Cucumis melo])

HSP 1 Score: 645 bits (1663), Expect = 9.27e-230
Identity = 330/335 (98.51%), Postives = 332/335 (99.10%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTKKSMEIRFPRLAEEI+LDEKWFPLL+YLTTFGLKESHFLQMYERHMPSLQINVYSAQE
Sbjct: 198 MTKKSMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 257

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIP SRVGQIIAAAPS
Sbjct: 258 RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPS 317

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRID SWNTRYMFLSKEIGA
Sbjct: 318 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDISWNTRYMFLSKEIGA 377

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKV TSLTQVFSLSLEDNL
Sbjct: 378 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVSTSLTQVFSLSLEDNL 437

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD
Sbjct: 438 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 497

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 335
           ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Sbjct: 498 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 532

[Close]
BLAST of Cucsat.G15648.T4 vs. NCBI nr
Match: XP_038897632.1 (transcription termination factor MTERF9, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 634 bits (1636), Expect = 8.93e-226
Identity = 323/334 (96.71%), Postives = 330/334 (98.80%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTKK+MEIRFPRLAEEI+LDEKWFPLL+YLTTFGLKESHFLQMYERHMPSLQINVYSAQE
Sbjct: 191 MTKKAMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 250

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIP SRVGQIIAAAPS
Sbjct: 251 RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPS 310

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGI+EKDLGKVVQLSPQILVQRID SWNTRYMFLSKEIGA
Sbjct: 311 LFSYSVENSLKPTVRYLVEEVGIEEKDLGKVVQLSPQILVQRIDISWNTRYMFLSKEIGA 370

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRDNVVKMVTKHPQLLHYSI+DGL PRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL
Sbjct: 371 PRDNVVKMVTKHPQLLHYSIDDGLRPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 430

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSS VPTD
Sbjct: 431 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSLVPTD 490

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 334
           ECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERR
Sbjct: 491 ECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 524

[Close]
BLAST of Cucsat.G15648.T4 vs. NCBI nr
Match: XP_038897631.1 (transcription termination factor MTERF9, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 634 bits (1636), Expect = 1.11e-225
Identity = 323/334 (96.71%), Postives = 330/334 (98.80%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTKK+MEIRFPRLAEEI+LDEKWFPLL+YLTTFGLKESHFLQMYERHMPSLQINVYSAQE
Sbjct: 197 MTKKAMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 256

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIP SRVGQIIAAAPS
Sbjct: 257 RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPS 316

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGI+EKDLGKVVQLSPQILVQRID SWNTRYMFLSKEIGA
Sbjct: 317 LFSYSVENSLKPTVRYLVEEVGIEEKDLGKVVQLSPQILVQRIDISWNTRYMFLSKEIGA 376

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRDNVVKMVTKHPQLLHYSI+DGL PRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL
Sbjct: 377 PRDNVVKMVTKHPQLLHYSIDDGLRPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 436

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSS VPTD
Sbjct: 437 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSLVPTD 496

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 334
           ECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERR
Sbjct: 497 ECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERR 530

[Close]
BLAST of Cucsat.G15648.T4 vs. NCBI nr
Match: XP_023536515.1 (transcription termination factor MTERF9, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 627 bits (1617), Expect = 6.93e-223
Identity = 319/335 (95.22%), Postives = 330/335 (98.51%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTKK+ME RFPRLAEEI+LD+KW+PLL+YLTTFGLKESHFLQMYER MPSLQINV SAQE
Sbjct: 190 MTKKAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPSLQINVNSAQE 249

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRRIL+RQPQILEYTVENNLKSHVAFLLSLGIP SRVGQIIAAAPS
Sbjct: 250 RLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPS 309

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGI+EKDLGKVVQLSPQILVQRID SWNTRYMFLSKEIGA
Sbjct: 310 LFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGA 369

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRDNVVKMVTKHPQLLHYSI+DGLLPRINFLRSIGMRNSEILKV+TSLTQVFSLSLEDNL
Sbjct: 370 PRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVITSLTQVFSLSLEDNL 429

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD
Sbjct: 430 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 489

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 335
           ECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERRR
Sbjct: 490 ECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 524

[Close]
BLAST of Cucsat.G15648.T4 vs. ExPASy TrEMBL
Match: A0A0A0K3I9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G154490 PE=3 SV=1)

HSP 1 Score: 655 bits (1689), Expect = 3.35e-234
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE
Sbjct: 187 MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 246

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS
Sbjct: 247 RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 306

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA
Sbjct: 307 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 366

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL
Sbjct: 367 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 426

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD
Sbjct: 427 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 486

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 335
           ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Sbjct: 487 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 521

[Close]
BLAST of Cucsat.G15648.T4 vs. ExPASy TrEMBL
Match: A0A1S3CI38 (transcription termination factor MTERF9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501230 PE=3 SV=1)

HSP 1 Score: 645 bits (1663), Expect = 4.49e-230
Identity = 330/335 (98.51%), Postives = 332/335 (99.10%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTKKSMEIRFPRLAEEI+LDEKWFPLL+YLTTFGLKESHFLQMYERHMPSLQINVYSAQE
Sbjct: 198 MTKKSMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 257

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIP SRVGQIIAAAPS
Sbjct: 258 RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPS 317

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRID SWNTRYMFLSKEIGA
Sbjct: 318 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDISWNTRYMFLSKEIGA 377

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKV TSLTQVFSLSLEDNL
Sbjct: 378 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVSTSLTQVFSLSLEDNL 437

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD
Sbjct: 438 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 497

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 335
           ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Sbjct: 498 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 532

[Close]
BLAST of Cucsat.G15648.T4 vs. ExPASy TrEMBL
Match: A0A6J1IJ03 (transcription termination factor MTERF9, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476719 PE=3 SV=1)

HSP 1 Score: 625 bits (1613), Expect = 1.46e-222
Identity = 318/335 (94.93%), Postives = 330/335 (98.51%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTKK++E RFPRLAEEI+LD+KW+PLL+YLTTFGLKESHFLQMYER MPSLQINV SAQE
Sbjct: 192 MTKKAIENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPSLQINVNSAQE 251

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRRIL+RQPQILEYTVENNLKSHVAFLLSLGIP SRVGQIIAAAPS
Sbjct: 252 RLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPS 311

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGI+EKDLGKVVQLSPQILVQRID SWNTRYMFLSKEIGA
Sbjct: 312 LFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGA 371

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRDNVVKMVTKHPQLLHYSI+DGLLPRINFLRSIGMRNSEILKV+TSLTQVFSLSLEDNL
Sbjct: 372 PRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVITSLTQVFSLSLEDNL 431

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD
Sbjct: 432 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 491

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 335
           ECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERRR
Sbjct: 492 ECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 526

[Close]
BLAST of Cucsat.G15648.T4 vs. ExPASy TrEMBL
Match: A0A6J1FDR7 (transcription termination factor MTERF9, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443171 PE=3 SV=1)

HSP 1 Score: 625 bits (1613), Expect = 1.57e-222
Identity = 318/335 (94.93%), Postives = 330/335 (98.51%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTK++ME RFPRLAEEI+LD+KW+PLL+YLTTFGLKESHFLQMYER MPSLQINV SAQE
Sbjct: 194 MTKEAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFLQMYERRMPSLQINVNSAQE 253

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRRIL+RQPQILEYTVENNLKSHVAFLLSLGIP SRVGQIIAAAPS
Sbjct: 254 RLEYLLSVGVKQRDVRRILMRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPS 313

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGI+EKDLGKVVQLSPQILVQRID SWNTRYMFLSKEIGA
Sbjct: 314 LFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGA 373

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRDNVVKMVTKHPQLLHYSI+DGLLPRINFLRSIGMRNSEILKV+TSLTQVFSLSLEDNL
Sbjct: 374 PRDNVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVITSLTQVFSLSLEDNL 433

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD
Sbjct: 434 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 493

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 335
           ECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERRR
Sbjct: 494 ECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 528

[Close]
BLAST of Cucsat.G15648.T4 vs. ExPASy TrEMBL
Match: A0A6J1CG65 (transcription termination factor MTERF9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010507 PE=3 SV=1)

HSP 1 Score: 621 bits (1601), Expect = 7.36e-221
Identity = 316/334 (94.61%), Postives = 327/334 (97.90%), Query Frame = 0 

Query: 1   MTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQE 60
           MTKKSME RFPRLAEEI+LD+KWFPLL+YLTTFGLKESHFLQMYERHMPSLQINV SAQE
Sbjct: 185 MTKKSMETRFPRLAEEIELDDKWFPLLDYLTTFGLKESHFLQMYERHMPSLQINVLSAQE 244

Query: 61  RLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPS 120
           RLEYLLSVGVKQRDVRR+LLRQPQILEYTVENNLKSHVAFLLSLGIP SRVGQIIAAAPS
Sbjct: 245 RLEYLLSVGVKQRDVRRMLLRQPQILEYTVENNLKSHVAFLLSLGIPNSRVGQIIAAAPS 304

Query: 121 LFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGA 180
           LFSYSVENSLKPTVRYLVEEVGI+EKDLGKVVQLSPQILVQRID SWNTRYMFLSKEIGA
Sbjct: 305 LFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDVSWNTRYMFLSKEIGA 364

Query: 181 PRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNL 240
           PRD+VVKMVTKHPQLLHYSI+DGLLPRINFLRSIGMRNSEILKVLTSLTQV SLSLEDNL
Sbjct: 365 PRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVLTSLTQVLSLSLEDNL 424

Query: 241 KPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTD 300
           KPKY YLINELRNEV+SLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSS VPTD
Sbjct: 425 KPKYKYLINELRNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSLVPTD 484

Query: 301 ECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 334
           ECFC+QWAETSLDKYLEFR+RLLLKEFA+KYERR
Sbjct: 485 ECFCQQWAETSLDKYLEFRQRLLLKEFAQKYERR 518

The following BLAST results are available for this feature:
BLAST of Cucsat.G15648.T4 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FM806.4e-15379.88Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
F4IHL32.3e-2227.35Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9SZL63.4e-2126.59Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
Q84X535.8e-2128.70Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
Q6AUK64.9e-2022.53Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja... [more]
BLAST of Cucsat.G15648.T4 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004151387.16.92e-234100.00transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KGN440... [more]
XP_008462974.19.27e-23098.51PREDICTED: transcription termination factor MTERF9, chloroplastic [Cucumis melo][more]
XP_038897632.18.93e-22696.71transcription termination factor MTERF9, chloroplastic isoform X2 [Benincasa his... [more]
XP_038897631.11.11e-22596.71transcription termination factor MTERF9, chloroplastic isoform X1 [Benincasa his... [more]
XP_023536515.16.93e-22395.22transcription termination factor MTERF9, chloroplastic [Cucurbita pepo subsp. pe... [more]
BLAST of Cucsat.G15648.T4 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3I93.35e-234100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G154490 PE=3 SV=1[more]
A0A1S3CI384.49e-23098.51transcription termination factor MTERF9, chloroplastic OS=Cucumis melo OX=3656 G... [more]
A0A6J1IJ031.46e-22294.93transcription termination factor MTERF9, chloroplastic OS=Cucurbita maxima OX=36... [more]
A0A6J1FDR71.57e-22294.93transcription termination factor MTERF9, chloroplastic OS=Cucurbita moschata OX=... [more]
A0A6J1CG657.36e-22194.61transcription termination factor MTERF9, chloroplastic OS=Momordica charantia OX... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 76..107
e-value: 7.0E-5
score: 32.2
coord: 112..144
e-value: 9.3E-5
score: 31.8
coord: 149..181
e-value: 2.6
score: 17.0
coord: 222..254
e-value: 0.072
score: 22.2
coord: 186..217
e-value: 2.9E-6
score: 36.8
coord: 255..286
e-value: 8.6E-4
score: 28.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 27..101
e-value: 2.2E-8
score: 33.4
coord: 90..284
e-value: 9.0E-38
score: 130.0
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 2..327
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 86..322
e-value: 6.0E-55
score: 188.2
NoneNo IPR availablePANTHERPTHR13068:SF151TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTICcoord: 2..327

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G15648Cucsat.G15648gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15648.T4.E1Cucsat.G15648.T4.E1exon
Cucsat.G15648.T4.E2Cucsat.G15648.T4.E2exon
Cucsat.G15648.T4.E3Cucsat.G15648.T4.E3exon
Cucsat.G15648.T4.E4Cucsat.G15648.T4.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15648.T4.C1Cucsat.G15648.T4.C1CDS
Cucsat.G15648.T4.C2Cucsat.G15648.T4.C2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G15648.T4Cucsat.G15648.T4-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0032502 developmental process
biological_process GO:0006353 DNA-templated transcription, termination
molecular_function GO:0003690 double-stranded DNA binding