Cucsat.G15599.T1 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G15599.T1
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionthylakoid lumenal 17.4 kDa protein, chloroplastic
Locationctg2009: 2766987 .. 2770480 (+)
RNA-Seq ExpressionCucsat.G15599.T1
SyntenyCucsat.G15599.T1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTACGTGTACTGCCACGTGATCAAGATCAGATCTCCCAACATCTTCGAACGGATAAGTCAAGCCACAGTGAGGGAGGGGGAGGGAATTCAATTTTTCCCAATGGCCGCTTTATCAACTCCCCTCTCTCACAATGGTTTCTCTCGCAGCTTCTTCTCTACAAGACGTTCAAAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGGTTAGTCTTTTCTCTATCTCTTCTATCTATAGTTTTATGCATTGATTTACTCCAATAATTGCTACATTCTGTACCCTTTTGTGGGTAAATTGCGTTGGCTTCCTGCCCTTTGATTGCCTATTACATCTTGTTAAGCTTAGGATCAAGATGCTGGTTCGCCAAATTGGTTATTTCTTTGAATGAGTTCAAATTTGTAACAAAAAAATTAATGTGTTTGCATACCCTGAAATGTGCTTAGTCTAATACAATTAGATGGTAATTAGATGGTGTTTGGTGCGCTGAGTTGAGTTCTAAAGCATGGAATCAATGTGTTGAAATTAGTAAATCTATTTTAGAGGGGCATTGTTGTTTAGTCCGGAGATAGTAATCATTAGAAAGAGGAAGAGAGACAAAGAAGAAGATGAACTGATGTTGTTGACATTGATGAAGTTGAGTTATTTAACACCAATTTATGAAGTTGATGGGCTAAACACTTTCGTAGGATTCTTCACCAAGTAGAGGGAAACAAATATTATGGAAATTGGACATTAAGTTGGAGTAAACAACTCAATTTCAAAAGTAAACACCATTGAAGTTTGTACATTTATTGAGTAAATTTTTCTACCCTATATTTTTATTTTTTACATTTATCGAGTAACTTTATTTTCTTTCTTAATCTACTTTTCACAATTATCAAGCAACTCCATCTTAGAACTCTGTTACCTTTGTCTAACAACACAAACTTACTAATTCCACTCAATTGGTCCAACACCCCTAACTCTACTCAATTGGCCAAACACCCCTAGCTTCATATCTTATATCTTACAACACAAAACTACTAACTCCATCATATTACCTCTAGACTTATTAATTCCACTCAATTGGCCAAACACCCTCTAACTGAACTTGCATCGAAGTATTATGAGTTATATTTTAATGGAGTTTTATCTGCCATGCCATTGTCGCTGCACTTACAGCTACCAGGGATGGGGCAGAACCAAGAGAAAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGGTTAATAGCATTTCTGTTCATTTATAGTTTATACTTTTAAGTTTTGTATTGAATAGTTTGTACCCTAGATAAATTTTCAACTATTTGGAATATATGGATATAATCAACTTTGCTGCAGTAATCCATCAACTCAAGTCCATGACAATATACTGTAGTATGTTGATTATATTTAATTTTTGCATTATTTTCTGTTGATTTGAAGTTTGTAGTGATTTATAACAGTTGACACGACTTTTAGAATAATGAAATGCTATTCAAATTTATCATGATATTTGGGTATGAACTGAAAATTCGCAAGCGCTATTCCGAACCTACAATGTTGCATTTAAATATAGGCTTAAGATGCAAGACCTAGTTATTTTTTTAGGGGGTTGAGTGTGCTGGTTTGGAAGCCCTACTTTTCCAGCTCCCTCCCACATCATTCTGAGCCCACATCCCTTTCTGGATGTTCTACGATACCATGATTATAAGGCTCTTTCTGATAGGATAACTTGTCAGTTACGTTTTCCTGATTCTAACTAAAATTCTGTTATGTACTTCACCAGTTGACATCCAGTTCATGTTACTCGATTTTCTTCTATTCATGTTATGTTTTTCCTTTTATAGTGATGATTGACTAATGTTATTCACTTTCTGTCGCAAGCGTCAAATTGTTCGACGTTTTACTTTGGGAAAGAAACCTGTTGATCTTATAATGTCTGGGACTTGCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATGTGAGCGTGCTTTTGTTGGTAATACCATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTGAAAGGGAAATCTCTTGCAGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCATACCCCACTCTAAGAAGGAAGTGGGTTGTTAACAAATCATTCATATTAGTGGTGATTTTATTAAGTTTTAAAATCACTTTCAAACATATTTTTGTTGCTCAAATTATGTTCAACATTTAATTATATACTTTTAGAAACGTACTATTAAATTTTATTTTGAATAATTTAAAAACATTTTAGAATGTTTTTTAAAATGACAATAACGATTTTAATCATTTTGAAAATCACTCCTAAACATGTCATTAGTTTGTAGACTCTGCTCTCAATAATGGTACATAGATAAAATCCACATGCTCAACATATGCTAATTTATAGAATAAATCCCAGGCTCCAAAACTATTTAGGAACGTGGATGATCTCATTTTAATTTTTAACTGGAATGAAACATCAAAAGATGTTTCATACCCTGCTCTCTTCTTGTGCTTCAAGTAAATTTGATGGGAAGCCAAAAATGCATTCAAGTAGACTATTAAGAAGTTTCATATCTGTTGACCTATTAAGCTGCATGTTAATCCCATGATTGATCCTAAGCTGGTCATGGGTTTGCTAAAATTATTGGCGGATTTGTCATTTGGTTTTTAGTTTTTGGAAATTGAATCTATGAACACTCATGGCACTCTAAAAAGGATACATATAAGTACATGTTTTCTGTTTTAAGGACGACTCCATAAGAATCTTGAAAAAAAAACTCACAGTATGGGTTAAAATATCATGACAACGTTGCATATTGCAGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCCACATATATAGTTTCAATACTTGCACTATTTGTATTGTACAATAAACAGCTTGATTGTTTTCAGTTTTGGTAAGTAATATATATACAAATCAAAAGAGATGACTCCCTCTCACTCCTATTGAAGCACTACGTGCTGTTTTCTATTTCTCATGGCGTTGTTTCACTGTTTCATGTAATTTGGGCTTGCAGGGGAAAAAAAGAAAGAGATTTGTCTTACTTTTTTAATCTAGGGTTTTAACATTCCGTCGGTGCTCTC

Coding sequence (CDS)

ATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Protein sequence

MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Homology
BLAST of Cucsat.G15599.T1 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 2.7e-38
Identity = 77/101 (76.24%), Postives = 91/101 (90.10%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           M  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNFGK+NL+GA+F+NTVLSGST
Sbjct: 136 MVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGST 195

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 102
           F++A LED VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 196 FEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

BLAST of Cucsat.G15599.T1 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 9.0e-10
Identity = 35/105 (33.33%), Postives = 54/105 (51.43%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           M ++ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S 
Sbjct: 136 MRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSD 195

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 101
              A++E A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 196 LGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

BLAST of Cucsat.G15599.T1 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 31/106 (29.25%), Postives = 52/106 (49.06%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           ++D+ F  ADL   V + +  +GA   G D +N +    +F  A+L  A+    ++  + 
Sbjct: 74  LTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGADLTNAVLTEAIMMRTK 133

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGCR 102
           FDDA++  A F   ++   ++ KLC     VNP      R  LGC+
Sbjct: 134 FDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVSTRESLGCQ 179

BLAST of Cucsat.G15599.T1 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-04
Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 0

Query: 4   AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDD 63
           AK + ADLS   ++KA   GA     +F  A L       ANL+GA  + T L+G+    
Sbjct: 100 AKLNQADLSHADLTKASLYGAFAVKTNFKGAKLSGATLAHANLRGANLEQTNLTGANLFA 159

Query: 64  AQLEDAVFEDTIIGYIDLQKLCVN 88
           A L +A F+     + +LQ+ C++
Sbjct: 160 ANLREANFQKADFSWANLQEACLS 183

BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: XP_011651313.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 hypothetical protein Csa_010496 [Cucumis sativus])

HSP 1 Score: 200 bits (509), Expect = 8.57e-63
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST
Sbjct: 137 MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 196

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 197 FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: KAG7013309.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197 bits (502), Expect = 8.85e-63
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST
Sbjct: 61  MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 120

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 121 FDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 161

BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 199 bits (506), Expect = 2.45e-62
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST
Sbjct: 137 MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 196

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 197 FDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: KAA0050533.1 (thylakoid lumenal 17.4 kDa protein [Cucumis melo var. makuwa] >TYK11278.1 thylakoid lumenal 17.4 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (506), Expect = 2.45e-62
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST
Sbjct: 137 MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 196

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 197 FDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: KAG6574243.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197 bits (502), Expect = 9.90e-62
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST
Sbjct: 137 MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 196

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 197 FDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A0A0LC74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1)

HSP 1 Score: 200 bits (509), Expect = 4.15e-63
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST
Sbjct: 137 MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 196

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 197 FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A5D3CJC6 (Thylakoid lumenal 17.4 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001360 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 1.18e-62
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST
Sbjct: 137 MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 196

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 197 FDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 1.18e-62
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST
Sbjct: 137 MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 196

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 197 FDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A6J1G0I9 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449567 PE=4 SV=1)

HSP 1 Score: 197 bits (502), Expect = 4.80e-62
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST
Sbjct: 137 MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 196

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 197 FDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A6J1HX78 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467480 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 1.37e-61
Identity = 98/101 (97.03%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGST 60
           MS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTV+SGST
Sbjct: 137 MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVVSGST 196

Query: 61  FDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 101
           FDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 197 FDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P817602.7e-3876.24Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
Q8H1Q19.0e-1033.33Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
B1WVN51.1e-0729.25Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ... [more]
P742212.5e-0433.33Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ... [more]
Match NameE-valueIdentityDescription
XP_011651313.18.57e-63100.00thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 ... [more]
KAG7013309.18.85e-6398.02Thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita argyrosperma subsp.... [more]
XP_008455988.12.45e-6299.01PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo][more]
KAA0050533.12.45e-6299.01thylakoid lumenal 17.4 kDa protein [Cucumis melo var. makuwa] >TYK11278.1 thylak... [more]
KAG6574243.19.90e-6298.02Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosper... [more]
Match NameE-valueIdentityDescription
A0A0A0LC744.15e-63100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1[more]
A0A5D3CJC61.18e-6299.01Thylakoid lumenal 17.4 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C2V71.18e-6299.01thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A6J1G0I94.80e-6298.02thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1HX781.37e-6197.03thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.80coord: 1..101
e-value: 2.0E-21
score: 77.5
NoneNo IPR availablePANTHERPTHR47485:SF1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 1..101
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 1..83
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 35..73
e-value: 6.8E-9
score: 35.2
IPR044195Pentapeptide repeat containing protein TL17-likePANTHERPTHR47485THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 1..101

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G15599Cucsat.G15599gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15599.T1.E1Cucsat.G15599.T1.E1exon
Cucsat.G15599.T1.E2Cucsat.G15599.T1.E2exon
Cucsat.G15599.T1.E3Cucsat.G15599.T1.E3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15599.T1.C1Cucsat.G15599.T1.C1CDS
Cucsat.G15599.T1.C2Cucsat.G15599.T1.C2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G15599.T1Cucsat.G15599.T1-proteinpolypeptide