Cucsat.G15599.T1 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCTACGTGTACTGCCACGTGATCAAGATCAGATCTCCCAACATCTTCGAACGGATAAGTCAAGCCACAGTGAGGGAGGGGGAGGGAATTCAATTTTTCCCAATGGCCGCTTTATCAACTCCCCTCTCTCACAATGGTTTCTCTCGCAGCTTCTTCTCTACAAGACGTTCAAAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGGTTAGTCTTTTCTCTATCTCTTCTATCTATAGTTTTATGCATTGATTTACTCCAATAATTGCTACATTCTGTACCCTTTTGTGGGTAAATTGCGTTGGCTTCCTGCCCTTTGATTGCCTATTACATCTTGTTAAGCTTAGGATCAAGATGCTGGTTCGCCAAATTGGTTATTTCTTTGAATGAGTTCAAATTTGTAACAAAAAAATTAATGTGTTTGCATACCCTGAAATGTGCTTAGTCTAATACAATTAGATGGTAATTAGATGGTGTTTGGTGCGCTGAGTTGAGTTCTAAAGCATGGAATCAATGTGTTGAAATTAGTAAATCTATTTTAGAGGGGCATTGTTGTTTAGTCCGGAGATAGTAATCATTAGAAAGAGGAAGAGAGACAAAGAAGAAGATGAACTGATGTTGTTGACATTGATGAAGTTGAGTTATTTAACACCAATTTATGAAGTTGATGGGCTAAACACTTTCGTAGGATTCTTCACCAAGTAGAGGGAAACAAATATTATGGAAATTGGACATTAAGTTGGAGTAAACAACTCAATTTCAAAAGTAAACACCATTGAAGTTTGTACATTTATTGAGTAAATTTTTCTACCCTATATTTTTATTTTTTACATTTATCGAGTAACTTTATTTTCTTTCTTAATCTACTTTTCACAATTATCAAGCAACTCCATCTTAGAACTCTGTTACCTTTGTCTAACAACACAAACTTACTAATTCCACTCAATTGGTCCAACACCCCTAACTCTACTCAATTGGCCAAACACCCCTAGCTTCATATCTTATATCTTACAACACAAAACTACTAACTCCATCATATTACCTCTAGACTTATTAATTCCACTCAATTGGCCAAACACCCTCTAACTGAACTTGCATCGAAGTATTATGAGTTATATTTTAATGGAGTTTTATCTGCCATGCCATTGTCGCTGCACTTACAGCTACCAGGGATGGGGCAGAACCAAGAGAAAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGGTTAATAGCATTTCTGTTCATTTATAGTTTATACTTTTAAGTTTTGTATTGAATAGTTTGTACCCTAGATAAATTTTCAACTATTTGGAATATATGGATATAATCAACTTTGCTGCAGTAATCCATCAACTCAAGTCCATGACAATATACTGTAGTATGTTGATTATATTTAATTTTTGCATTATTTTCTGTTGATTTGAAGTTTGTAGTGATTTATAACAGTTGACACGACTTTTAGAATAATGAAATGCTATTCAAATTTATCATGATATTTGGGTATGAACTGAAAATTCGCAAGCGCTATTCCGAACCTACAATGTTGCATTTAAATATAGGCTTAAGATGCAAGACCTAGTTATTTTTTTAGGGGGTTGAGTGTGCTGGTTTGGAAGCCCTACTTTTCCAGCTCCCTCCCACATCATTCTGAGCCCACATCCCTTTCTGGATGTTCTACGATACCATGATTATAAGGCTCTTTCTGATAGGATAACTTGTCAGTTACGTTTTCCTGATTCTAACTAAAATTCTGTTATGTACTTCACCAGTTGACATCCAGTTCATGTTACTCGATTTTCTTCTATTCATGTTATGTTTTTCCTTTTATAGTGATGATTGACTAATGTTATTCACTTTCTGTCGCAAGCGTCAAATTGTTCGACGTTTTACTTTGGGAAAGAAACCTGTTGATCTTATAATGTCTGGGACTTGCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATGTGAGCGTGCTTTTGTTGGTAATACCATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTGAAAGGGAAATCTCTTGCAGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCATACCCCACTCTAAGAAGGAAGTGGGTTGTTAACAAATCATTCATATTAGTGGTGATTTTATTAAGTTTTAAAATCACTTTCAAACATATTTTTGTTGCTCAAATTATGTTCAACATTTAATTATATACTTTTAGAAACGTACTATTAAATTTTATTTTGAATAATTTAAAAACATTTTAGAATGTTTTTTAAAATGACAATAACGATTTTAATCATTTTGAAAATCACTCCTAAACATGTCATTAGTTTGTAGACTCTGCTCTCAATAATGGTACATAGATAAAATCCACATGCTCAACATATGCTAATTTATAGAATAAATCCCAGGCTCCAAAACTATTTAGGAACGTGGATGATCTCATTTTAATTTTTAACTGGAATGAAACATCAAAAGATGTTTCATACCCTGCTCTCTTCTTGTGCTTCAAGTAAATTTGATGGGAAGCCAAAAATGCATTCAAGTAGACTATTAAGAAGTTTCATATCTGTTGACCTATTAAGCTGCATGTTAATCCCATGATTGATCCTAAGCTGGTCATGGGTTTGCTAAAATTATTGGCGGATTTGTCATTTGGTTTTTAGTTTTTGGAAATTGAATCTATGAACACTCATGGCACTCTAAAAAGGATACATATAAGTACATGTTTTCTGTTTTAAGGACGACTCCATAAGAATCTTGAAAAAAAAACTCACAGTATGGGTTAAAATATCATGACAACGTTGCATATTGCAGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCCACATATATAGTTTCAATACTTGCACTATTTGTATTGTACAATAAACAGCTTGATTGTTTTCAGTTTTGGTAAGTAATATATATACAAATCAAAAGAGATGACTCCCTCTCACTCCTATTGAAGCACTACGTGCTGTTTTCTATTTCTCATGGCGTTGTTTCACTGTTTCATGTAATTTGGGCTTGCAGGGGAAAAAAAGAAAGAGATTTGTCTTACTTTTTTAATCTAGGGTTTTAACATTCCGTCGGTGCTCTC ATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR Homology
BLAST of Cucsat.G15599.T1 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2) HSP 1 Score: 159.1 bits (401), Expect = 2.7e-38 Identity = 77/101 (76.24%), Postives = 91/101 (90.10%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.0e-10 Identity = 35/105 (33.33%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07 Identity = 31/106 (29.25%), Postives = 52/106 (49.06%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.5e-04 Identity = 28/84 (33.33%), Postives = 43/84 (51.19%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: XP_011651313.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 hypothetical protein Csa_010496 [Cucumis sativus]) HSP 1 Score: 200 bits (509), Expect = 8.57e-63 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: KAG7013309.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 197 bits (502), Expect = 8.85e-63 Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]) HSP 1 Score: 199 bits (506), Expect = 2.45e-62 Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: KAA0050533.1 (thylakoid lumenal 17.4 kDa protein [Cucumis melo var. makuwa] >TYK11278.1 thylakoid lumenal 17.4 kDa protein [Cucumis melo var. makuwa]) HSP 1 Score: 199 bits (506), Expect = 2.45e-62 Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. NCBI nr
Match: KAG6574243.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197 bits (502), Expect = 9.90e-62 Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A0A0LC74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1) HSP 1 Score: 200 bits (509), Expect = 4.15e-63 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A5D3CJC6 (Thylakoid lumenal 17.4 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001360 PE=4 SV=1) HSP 1 Score: 199 bits (506), Expect = 1.18e-62 Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1) HSP 1 Score: 199 bits (506), Expect = 1.18e-62 Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A6J1G0I9 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449567 PE=4 SV=1) HSP 1 Score: 197 bits (502), Expect = 4.80e-62 Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cucsat.G15599.T1 vs. ExPASy TrEMBL
Match: A0A6J1HX78 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467480 PE=4 SV=1) HSP 1 Score: 196 bits (499), Expect = 1.37e-61 Identity = 98/101 (97.03%), Postives = 101/101 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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