Cucsat.G15556.T4 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G15556.T4
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Polyadenylate-binding protein
Location	ctg2009: 1328282 .. 1334079 (+)
RNA-Seq Expression	Cucsat.G15556.T4
Synteny	Cucsat.G15556.T4

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGAAAAAAGTTACCGTTACCGGTTAGACTTGACCTCGTCAGATGGGCCGCAGTGTATTGCGATGGACGGTTGAGATTTCTTAGGTAGATTTTTTCTCTAGGGTTTACCCAGAACTTCCCACATATATAAAGCCTTACATCTTCTCCCTCTTCCTCTTTCTTTTAGTGCAGTTTCATCTGCCCTCCAAACCCTCGCGTTTTTTTTTTAATTTGTTCACCGTCTCTTTCTCCGTCGCTCTCTACGTCACGCGCCGCCCCGCTTTCCGGCGGCTACTCATTTCTCCTATCGGGTCCTTCCGATTATCTATCCTATCCATTTTTCACTATCATTTATCTCATCCTGAAAAATCATAACCAATTATTCCTTTCTTTTAGTAGTAGGAAGATTTTTCCTTCGGGGTTGTTTATTTTTGCTTCAATTTCCTATTATCTTTAAACGGTTTTTGTTATCCTCCCCCGGTTGTTCGTTGCGTTTTGCTGGCCTTTTTTGAGTGTCTGAAGATTCGCCGTTCATTCATTCCTTCTTAGGGTTTGTTTCTGAATAACAAAATTAGGAGAGGGAAGTGAGGAGAAAAGAAAAAAAGAGCAAAAACAAAAACATATTAATTCATTGAAAGATTTTTTTGAACAGAGTGAAATTATTTCCAGTATGGCGACTCAGGTGCAAGCTCAGCCTCAGAATGCTATTTCCGGCATCAATCCAGCGGCGAATGGCGGTGCCAATTTTGTCACTACTTCTTTGTACGTCGGAGATCTGGACCTGAATGTCACGGATTCGCAGCTTTATGACATTTTCAATCAGGTGGGCCAGGTAGTTTCGGTTCGGGTTTGCCGAGACTTGACGACCCGGCGATCTCTCGGTTATGGCTATGTCAACTACAGCAACCCACAAGATGGTCAGTTTGTCTTCACTTTTCTTCATTTCCCTCTACTGTTTAATGTAATTTGTTTCATTTTTTTTAGTTTAATATTTAGGGTGAACATTTCTCGTTCGGCTGATTGCTTGGGCTAGTAAAATGTAGAGTTGATATGTAAATATATGTGTGGATCATGTTTATTAATTCATTGATTTATTTCTCTATCTGAGATTTTTGAATCCCAAAAAGTTAAGCTTGTAGCAATCTAATGTTTAGTCGGGAAATTAGTGACACCAAAGTAGATAGCTTGTATAAAAGGTCGGATGATTGCTTTTAGGGTCCAATAATGAATAATGTTTACTGTATGATGGTTATTTCTTTCACTAATAAATTGTAAAACGCCAGACTGTTTGTTTCATTCTGTGGAGAATTAGAAAGTCGGGCTGTGGGTGGACTAGGAGGAGATGCTGTGGGTCATTTTGTTGCGTTGTTTGGGCTTCACTCTTCAGGATAAGAATGTTACCTTCTACGGTCTTGAAGTACATCTGTTTGGAAATGATAATGCAAATAGCATGAGTACATCTTAAATGTTCCATATCTCAAGTTGATGGTTGCTAGTCACACTACTGGGAGGATCTGAATTTGTTAGATTGTGATGCATATTTTATGATTTCAGATAACTTTGAACTAGAAACTTGATACAAGAATTTAGTTTTATTATTGAAAGCTCTATGGTGATTTGTCCTTCATTGAATGACAAATGTTCCATGTAACAACAATTATTTATTTTCATCACCATATACACCTGTAGCAATTTTGCTTAATTTTGGGCCTTTGGCTACCTTTATGTAAATTCTTTCACAATTAAGTTTGTGCCTTGAATTGTTTAAGCTTTTCATACTGATGTATGTAGTATGGACTCCTTATTCTTGGTGAGCTGTCAGAGTCCAACACGCGAAAATCTATGTCCCATATTATTTTTTTATTATTATTTTGGCACAAGCACACCAACGAACATACACAAACACATTAAAGAAACCCCAAACCTTTCAAATCAACAATGACCCTGAAGAGGGGTGGTCAGCGTCGGCAGCAAAGGGTGGGAGATTGAGCATCTTTGACAGTGGCAGTGCAGAGAGAGGAGAATGGGGGGGGGGGGGGGGGGGGTGAGTAGGGGGAAGAGCAAGGGTGGCTGTGGATGTGAGATGAGCAGAACAGTGGAGGGAAAAAGAAAGAACGTTATTTAGGGTTACGTTCTTACTTTCAAATGGGCTTTTGGCTTTATTACATTCCTATGTGATGTGTCTGTTGGGTTTTTATTTTATTTATTTTTTAATGGCCTTTTCTTCTTCGTTATTATTTACAAAACATTATTTTAATAATTAATGAAAAAGGTATTTTGGGTTTGGTATTGTTGATATAAAATGATGTCCTATTTTTTTTTTAAATTTGCGGATTGTAGGTCCTTGTTCTTTCTTGTCAATTGAAAAGTAGTATTTCAAATTATCATGCGATTCAAACAATGAATTTCATATTCTAATACCTCACTAAATTTTAAATAGCCACGTTTTTTTCTCTATTGTAATCCTATTTTGCCTGAACAGCTGCAAGAGCATTGGATGTGCTGAACTTTACCCCTTTGAATGGAAAGCCTATTAGAGTGATGTATTCTCACCGTGACCCAAGCATTCGCAAGAGTGGGGCTGGAAATATATTCATCAAGGTACTAGTATTTTTCATTTTATGTTTATTATCTTGTCCATTTTATTTGAATTGTTTATTTGATTCTGTTCTTGAGTTAACTTTTCACTCTAATTTTCAGAATTTAGACAAGGCAATTGACCACAAAGCTCTACATGATACATTTTCTGCATTTGGTAGTATCCTGTCTTGCAAAGTGGCTTTAGATTCCTCTGGCCAGTCAAAAGGCTATGGTTTTGTGCAATTTGACAATGAGGAGTCTGCTCTGAAAGCTATTGAGAAGCTGAACGGTATGCTGTTGAATGATAAGCAAGTTTATGTAGGACCTTTTCTTCGTAAACAAGAAAGAGATGGTGTTGTTGACAAATCCAAATTTAACAATGTATTTGTAAAAAATCTTTCTGAGACTACTACTGAAGAGGATTTGAACAAAGCTTTTTCTGAATTTGGGACACTCACGAGTATTGTTGTGATGAGGGATGCTGATGGCAAATCAAGATGCTTTGGATTTGTTAATTTTGAAAATGCCGATGATGCTGCTAGGGCAGTTGACACCCTTAACGGAAAGTTAGTTGATGATAAGGAGTGGTATGTTGGAAAAGCACAGAAAAAATCTGAAAGAGAAGTTGAATTAAAGCACCGGTTTGAACAAACTATGAAAGAAGCAGCTGACAAGTACCAAGGGGCAAATTTGTACATTAAAAATTTAGATGATAGCATTGGTGATGATAAGCTTAAGGAGCTGTTTGCTCCATTTGGCACAATCACCTCATGCAAGGTTGTAATAATATTGCAGTTTAACTCATGACACTACCTTTGGTTTAAGCCTCTTGTGGTTAAAGTATTATGGTTATTTTGTGTGTTTTAGGTCATGCGCGACCCCAATGGCATAAGCAGAGGTTCTGGATTTGTTGCATTCTCAACCCCTGATGAGGCATCTAGAGCTGTGAGTAGATGTGCTTATTATTGTTATTATTTCTATTTATGATTTGGAAACATCCATACACATGGTTAATTTATTTGTTGTGGATTATCCACTCATATATGCTTGTCATTAATGATACAAAATATGGAAGGACTGTAATAGTTCACTTGGTTTAATTGATAGCTTGTGGAGATGAATGGCAAAATGGTTGTTAGTAAACCATTATATGTAGCACTTGCACAGCGGAAGGAAGATAGGAGAGCCAGATTGCAGGTACTTCCGTTGATGTTTTCATACTTATTCTTGGCATTACCATTGTATTGTAACTTCAATTGTCAGAACTTGTAACATCAATCTCTGATGGTTGCTTTCTTCTTCTTCATCTTCTTCTTCCTTTTTTTTTTTAAATAAAAAAGTTTGTCTAACATTTATGTGTCATGACTTGGTGCCTAAATTTGTCTAACATTGTGAGTCATGACTTTAATATCTTTGAGTATGCCCTGTAGGCTCAGTTCTCTCAAATACGGTCTGTTCCCATGCCTGCTTCAGTTGCCCCACGGATGCCAATATATCCCCCTGGTGGACCAGGTATCGGACAGCAGTTGTTTTATGGTCAAGCTCCTCCTGCAATGATTCCTTCCCAAGTAACTACCTCCACCAGGCCCTTTTTCATTTTAATTTCATATTCTGTCTTTTGTTCTTGCACCAAACTAGTGGTCAATAGTTGATGTTCATATTTACTCATGCATCTGTGATTCGATCCTTCTATGCCATCTGGAAAGTGTGGTGTGTATGGTTAGCCCTAATTTCTGTATTATTGTTTTGTGTCTTACGGGTATTGTTTTTGCCAGGGTGGGTTTGGTTATCAGCAGCAGCTTGTTCCTGGTATAAGGCCTGGTGGAGGACCAATGCCAAATTTCTTTGTCCCAATGGTTCAGCAGGGTCAGCAAGGCCAGCGCCCTGGGGGCAGACGTGCAGGAGCTGTCCAGCAAACTCAGCAGCCTGTTCCAATGATGCAACAACAGGTTGGTGATTTTTTCTTTCTTTATTTTCTCTGTCTGTTGGGCTTCCTCTTGTTGTTTAATGTCTGTTTTGGTTGGTTCATTGGGCGATAGATGTTGCCTAGAGGAGGACGTGTCTATCGCTATCCCCCTGGAAGAGGATTGCCTGATGTTGCTATGCCTGGTGTTGCTGGAGGCATGTTTTCTGTTCCATATGATATGGGAGGTATGCCATTGCGTGATGCGGCACACTCTCAACCTATCCCTATTGGTGCACTGGCTTCTGCTCTGGCAAATGCTACTCCAGACCAACAGAGAACAGTAAGCATTTTCTGTACTATAAATGTAGTTTTTGGATATCACACCTTGACGAAAGTTGGGACTATTGTCCAACTGTGTCTCAGATCTTTGTATTATACTGTTGAACGAAAAATAAAATAGAGATTGAAGTTTATATGAGAACATGTGCAGAAAGATGGAAAGTATATGTAAGCCTTTTATAGGATAGTTGTGGTGTTTGAAGTCTTACATTGCTTGTGATTGATGTGTAGATGCTGGGGGAGAATCTTTACCCGCTTGTGGAACAGTTAGAGCCTGACAACGCGGCCAAGGTAACTGGAATGCTTCTGGAGATGGACCAGACTGAGGTTTTGCATTTACTAGAGTCCCCGGAAGCCTTGAAGGCGAAAGTAGCTGAAGCTATGGAGGTTTTGAGGAATGTTGCGGCAGCTCAGCAGCAGCAGCAAGCTGGCAATGCAGCAGATCAGCTAGCTTCTCTGTCGCTGACGGAGAACCTCGTGTCGTGAGTTACTTGTGTTCATAAAGCTCCCTGATTCATGAAATGAAAATGTAGTAGTTGTGTGTGATACAATTGACTGTTTTTTTAATTTGTGGAGACTGCAGTACTGGCATAATTTGTTTGTAGTACTGGCTTTTATCTCTGAAGACTTTGCTGACATTTTCTTTTCTTTTTAGTTTTCGGTTAGCAGTACTCTCTTTTTCCCTAGAGGATGAAGGTTTTTGTTCTTGTTTTTTTTTTTAAACATTAATCCGACTTAGTGCTCTACTCCACTCTCTTGTGTTATGTGTTTTCCCTACTTCACGCTTCTTTGAGCAGGCATAAATGGTTTCTCGTAACTGGGAATGGCTGGCTTCATTTTAGTAGAATAAAGATCTAAAAAGTGGGGGTGGAGAATTTGATTGTTGAGAGTTCGATTTATTCGTTTAATGAATTTGTTGAGACTTCTAATTTTCTTCTTTAGAATGTTTCATTTTCCTTATTTCTCTTTCGTAGCATGTTTGGTTGTAACGGT

Coding sequence (CDS)

ATGGCGACTCAGGTGCAAGCTCAGCCTCAGAATGCTATTTCCGGCATCAATCCAGCGGCGAATGGCGGTGCCAATTTTGTCACTACTTCTTTGTACGTCGGAGATCTGGACCTGAATGTCACGGATTCGCAGCTTTATGACATTTTCAATCAGGTGGGCCAGGTAGTTTCGGTTCGGGTTTGCCGAGACTTGACGACCCGGCGATCTCTCGGTTATGGCTATGTCAACTACAGCAACCCACAAGATGCTGCAAGAGCATTGGATGTGCTGAACTTTACCCCTTTGAATGGAAAGCCTATTAGAGTGATGTATTCTCACCGTGACCCAAGCATTCGCAAGAGTGGGGCTGGAAATATATTCATCAAGAATTTAGACAAGGCAATTGACCACAAAGCTCTACATGATACATTTTCTGCATTTGGTAGTATCCTGTCTTGCAAAGTGGCTTTAGATTCCTCTGGCCAGTCAAAAGGCTATGGTTTTGTGCAATTTGACAATGAGGAGTCTGCTCTGAAAGCTATTGAGAAGCTGAACGGTATGCTGTTGAATGATAAGCAAGTTTATGTAGGACCTTTTCTTCGTAAACAAGAAAGAGATGGTGTTGTTGACAAATCCAAATTTAACAATGTATTTGTAAAAAATCTTTCTGAGACTACTACTGAAGAGGATTTGAACAAAGCTTTTTCTGAATTTGGGACACTCACGAGTATTGTTGTGATGAGGGATGCTGATGGCAAATCAAGATGCTTTGGATTTGTTAATTTTGAAAATGCCGATGATGCTGCTAGGGCAGTTGACACCCTTAACGGAAAGTTAGTTGATGATAAGGAGTGGTATGTTGGAAAAGCACAGAAAAAATCTGAAAGAGAAGTTGAATTAAAGCACCGGTTTGAACAAACTATGAAAGAAGCAGCTGACAAGTACCAAGGGGCAAATTTGTACATTAAAAATTTAGATGATAGCATTGGTGATGATAAGCTTAAGGAGCTGTTTGCTCCATTTGGCACAATCACCTCATGCAAGGTCATGCGCGACCCCAATGGCATAAGCAGAGGTTCTGGATTTGTTGCATTCTCAACCCCTGATGAGGCATCTAGAGCTCTTGTGGAGATGAATGGCAAAATGGTTGTTAGTAAACCATTATATGTAGCACTTGCACAGCGGAAGGAAGATAGGAGAGCCAGATTGCAGGCTCAGTTCTCTCAAATACGGTCTGTTCCCATGCCTGCTTCAGTTGCCCCACGGATGCCAATATATCCCCCTGGTGGACCAGGTATCGGACAGCAGTTGTTTTATGGTCAAGCTCCTCCTGCAATGATTCCTTCCCAAGGTGGGTTTGGTTATCAGCAGCAGCTTGTTCCTGGTATAAGGCCTGGTGGAGGACCAATGCCAAATTTCTTTGTCCCAATGGTTCAGCAGGGTCAGCAAGGCCAGCGCCCTGGGGGCAGACGTGCAGGAGCTGTCCAGCAAACTCAGCAGCCTGTTCCAATGATGCAACAACAGGTTGGTGATTTTTTCTTTCTTTATTTTCTCTGTCTGTTGGGCTTCCTCTTGTTGTTTAATGTCTGTTTTGGTTGGTTCATTGGGCGATAG

Protein sequence

MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRPGGRRAGAVQQTQQPVPMMQQQVGDFFFLYFLCLLGFLLLFNVCFGWFIGR

Homology

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BLAST of Cucsat.G15556.T4 vs. ExPASy Swiss-Prot
Match: P42731 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 1.7e-213
Identity = 368/506 (72.73%), Postives = 434/506 (85.77%), Query Frame = 0


Query: 4   QVQAQPQNAISGI---NPAANGGA---NFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVS 63
           Q+Q Q  N  +      PA +GGA    F  TSLYVGDLD NVTDSQL+D F Q+G VV+
Sbjct: 5   QLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVT 64

Query: 64  VRVCRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAG 123
           VRVCRDL TRRSLGYGYVN++NPQDAARA+  LN+ PL GKPIRVMYSHRDPS+R+SGAG
Sbjct: 65  VRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAG 124

Query: 124 NIFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKL 183
           NIFIKNLD++IDHKALHDTFS+FG+I+SCKVA+DSSGQSKGYGFVQ+ NEESA KAIEKL
Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKL 184

Query: 184 NGMLLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSI 243
           NGMLLNDKQVYVGPFLR+QERD   +K+KF NV+VKNL+E+TT++DL  AF E+G +TS 
Sbjct: 185 NGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSA 244

Query: 244 VVMRDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRF 303
           VVM+D +GKS+ FGFVNFENADDAARAV++LNG   DDKEWYVG+AQKKSERE EL+ R+
Sbjct: 245 VVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRY 304

Query: 304 EQTMKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVA 363
           EQ +KEAADK+Q +NLY+KNLD SI D+KLKE+F+PFGT+TS KVMRDPNG S+GSGFVA
Sbjct: 305 EQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVA 364

Query: 364 FSTPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMP 423
           F+TP+EA+ A+ +++GKM+ SKPLYVA+AQRKEDRR RLQAQFSQ+R V M  SV PRMP
Sbjct: 365 FATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMP 424

Query: 424 IYPPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQG 483
           +YPPGGPGIGQQ+FYGQAPPAMIP Q G+GYQQQLVPG+RPGGGP+P+FF+PMVQ   Q 
Sbjct: 425 VYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMPMVQ--PQQ 484

Query: 484 QRP-GGRRAGAVQQTQQPVPMMQQQV 503
           QRP GGRR G +Q +QQ  PMMQQQ+
Sbjct: 485 QRPGGGRRPGGIQHSQQQNPMMQQQM 508

[Close]

BLAST of Cucsat.G15556.T4 vs. ExPASy Swiss-Prot
Match: Q9FXA2 (Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=1)

HSP 1 Score: 740.0 bits (1909), Expect = 1.9e-212
Identity = 372/503 (73.96%), Postives = 427/503 (84.89%), Query Frame = 0


Query: 7   AQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTT 66
           A+   A +G   AA G A   TTSLYVGDLD  VTDSQL++ F Q GQVVSVRVCRD+TT
Sbjct: 23  AEAAAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTT 82

Query: 67  RRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDK 126
           RRSLGYGYVNY+ PQDA+RAL+ LNF  LNG+ IRVMYS RDPS+RKSG GNIFIKNLDK
Sbjct: 83  RRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDK 142

Query: 127 AIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQ 186
           +IDHKALH+TFSAFG ILSCKVA+D SGQSKGYGFVQ+D +E+A  AI+KLNGMLLNDKQ
Sbjct: 143 SIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQ 202

Query: 187 VYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGK 246
           VYVGPF+ K +RD   +K KF NV+VKNLSE+ ++E+LNK F EFG  TS V+MRD +GK
Sbjct: 203 VYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGK 262

Query: 247 SRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAAD 306
           S+ FGFVNFEN+DDAARAVD LNGK  DDKEW+VGKAQKKSERE ELK +FEQ++KEAAD
Sbjct: 263 SKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAAD 322

Query: 307 KYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASR 366
           K QG+NLY+KNLD+S+ DDKL+E FAPFGTITSCKVMRDP+G+SRGSGFVAFSTP+EA+R
Sbjct: 323 KSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATR 382

Query: 367 ALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPPGGPGI 426
           A+ EMNGKM+V+KPLYVALAQRKEDR+ARLQAQFSQ+R V MP +V PRM +YPPGGP +
Sbjct: 383 AITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPM 442

Query: 427 GQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQG-------QQGQR 486
           GQQLFYGQ PPAMIP Q GFGYQQQLVPG+RPGG PMPNFF+PM+QQG       QQ QR
Sbjct: 443 GQQLFYGQGPPAMIP-QPGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQR 502

Query: 487 PGGRRAGAVQQTQQPVPMMQQQV 503
           PGG R GA+ Q QQP PMMQQQ+
Sbjct: 503 PGGGRRGALPQPQQPSPMMQQQM 524

[Close]

BLAST of Cucsat.G15556.T4 vs. ExPASy Swiss-Prot
Match: O22173 (Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 1.8e-181
Identity = 320/491 (65.17%), Postives = 381/491 (77.60%), Query Frame = 0


Query: 15  GINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGY 74
           G+    +G  +    SLYVGDLD NVTDSQLYD F +V QVVSVRVCRD  T  SLGYGY
Sbjct: 32  GVGGGGDGVTHGALCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGY 91

Query: 75  VNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHKALH 134
           VNYSN  DA +A+  LN++ LNGK IR+ YS RD S R+SG GN+F+KNLDK++D+K LH
Sbjct: 92  VNYSNTDDAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLH 151

Query: 135 DTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLR 194
           + FS  G+I+SCKVA D  GQS+GYGFVQFD E+SA  AIEKLNG +LNDKQ++VGPFLR
Sbjct: 152 EAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLR 211

Query: 195 KQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVN 254
           K+ER+   DK KF NV+VKNLSE TT+++L   F ++G+++S VVMRD DGKSRCFGFVN
Sbjct: 212 KEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVN 271

Query: 255 FENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLY 314
           FEN +DAARAV+ LNGK  DDKEWYVGKAQKKSERE+EL  R+EQ   +  +K+ G NLY
Sbjct: 272 FENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLY 331

Query: 315 IKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMNGK 374
           +KNLDD++ D+KL+ELFA FGTITSCKVMRDP+G S+GSGFVAFS   EASR L EMNGK
Sbjct: 332 VKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGK 391

Query: 375 MVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPPGGPGIGQQLFYGQ 434
           MV  KPLYVALAQRKE+RRA+LQAQFSQ+R   +P  V PRMPI+  G PG+GQQ+FYGQ
Sbjct: 392 MVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIP-GVGPRMPIFTGGAPGLGQQIFYGQ 451

Query: 435 APPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRPGGRRAG---AVQQT 494
            PP +IP Q GFGYQ QLVPG+RP       F  PM+Q GQQG RPGGRR+G      Q 
Sbjct: 452 GPPPIIPHQPGFGYQPQLVPGMRPA-----FFGGPMMQPGQQGPRPGGRRSGDGPMRHQH 511

Query: 495 QQPVPMMQQQV 503
           QQP+P MQ Q+
Sbjct: 512 QQPMPYMQPQM 516

[Close]

BLAST of Cucsat.G15556.T4 vs. ExPASy Swiss-Prot
Match: O64380 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PAB3 PE=2 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 7.7e-145
Identity = 287/505 (56.83%), Postives = 359/505 (71.09%), Query Frame = 0


Query: 4   QVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRD 63
           Q   Q   +I   +P          +SLY GDLD  VT++ L+D+F  V  VVSVRVCRD
Sbjct: 24  QTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD 83

Query: 64  LTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKN 123
              RRSLGY Y+N+SNP DA RA++ LN+TPL  +PIR+M S+RDPS R SG GNIFIKN
Sbjct: 84  -QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKN 143

Query: 124 LDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLN 183
           LD +ID+KAL +TFS+FG+ILSCKVA+D +G+SKGYGFVQF+ EESA  AI+KLNGML+N
Sbjct: 144 LDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMN 203

Query: 184 DKQVYVGPFLRKQE--RDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMR 243
           DKQV+VG F+R+QE  RD      +F NV+VKNL +   E++L K F +FG ++S VVMR
Sbjct: 204 DKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMR 263

Query: 244 DADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTM 303
           D  G SRCFGFVNFE  + AA AV+ +NG  + D   YVG+AQKKSERE EL+ +FEQ  
Sbjct: 264 DQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQER 323

Query: 304 KEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTP 363
               +K QGANLY+KNLDDS+ D+KLKE+F+ +G +TS KVM +P G+SRG GFVA+S P
Sbjct: 324 INRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNP 383

Query: 364 DEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPP 423
           +EA RAL EMNGKM+  KPLY+ALAQRKEDRRA LQA FSQIR+ P P S       +PP
Sbjct: 384 EEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIRA-PGPMSGFH----HPP 443

Query: 424 GG--PGIGQQLFYGQAPPAMIPSQG-GFGYQQQLVPGIRPGGGPMPNFFV--PMVQQGQQ 483
           GG  PG  Q ++ GQ   +M+PSQ  G+G+Q Q +PG+RPG GP  NF V  P+ +Q Q 
Sbjct: 444 GGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGP-GNFIVPYPLQRQPQT 503

Query: 484 GQRPGGRR-AGAVQQTQQPVPMMQQ 501
           G R G RR A  VQQ  Q   +M +
Sbjct: 504 GPRMGFRRGATNVQQHIQQQQLMHR 521

[Close]

BLAST of Cucsat.G15556.T4 vs. ExPASy Swiss-Prot
Match: Q05196 (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=PAB5 PE=1 SV=3)

HSP 1 Score: 500.7 bits (1288), Expect = 2.0e-140
Identity = 275/510 (53.92%), Postives = 361/510 (70.78%), Query Frame = 0


Query: 12  AISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLG 71
           A++    AA        +SLYVGDLD +V +S L D+FNQV  V ++RVCRDL T RSLG
Sbjct: 42  AVAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLG 101

Query: 72  YGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHK 131
           Y YVN++NP+DA+RA++ LN+ P+  +PIR+M S+RDPS R SG GN+FIKNLD +ID+K
Sbjct: 102 YAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNK 161

Query: 132 ALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGP 191
           AL++TFS+FG+ILSCKVA+D  G+SKGYGFVQF+ EE+A  AI+KLNGMLLNDKQV+VG 
Sbjct: 162 ALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGH 221

Query: 192 FLRKQER----DGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKS 251
           F+R+Q+R     G V    F NV+VKNL +  T+++L K F ++G ++S VVM+D  G S
Sbjct: 222 FVRRQDRARSESGAV--PSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNS 281

Query: 252 RCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADK 311
           R FGFVNF + + AA AV+ +NG  + +   YVG+AQKKS+RE EL+ +FEQ      +K
Sbjct: 282 RSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEK 341

Query: 312 YQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRA 371
            QG+NLY+KNLDDS+ D+KLKE+F+ +G +TSCKVM +  G+SRG GFVA+S P+EA  A
Sbjct: 342 LQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLA 401

Query: 372 LVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRS------VPMPASVAPRMPIYPP 431
           + EMNGKM+  KPLYVALAQRKE+R+A LQ+ F+QIRS      VP P S       +PP
Sbjct: 402 MKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMS---GFHHHPP 461

Query: 432 GGP--GIGQQLFYGQAPPAMIPSQG-GFGYQQQLVPGIRPGGGPMPNFFV--PMVQQGQQ 491
           GGP  G    +F G     ++PSQ  G+GYQ Q +PG+RPG GP PNF +  P+ +Q Q 
Sbjct: 462 GGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGP-PNFMMPFPLQRQTQP 521

Query: 492 GQRPGGRR-AGAVQQTQQPVPMMQQQVGDF 506
           G R G RR A  +QQ  Q   M+QQ    F
Sbjct: 522 GPRVGFRRGANNMQQQFQQQQMLQQNASRF 544

[Close]

BLAST of Cucsat.G15556.T4 vs. NCBI nr
Match: XP_004140705.1 (polyadenylate-binding protein 8 [Cucumis sativus] >KGN57514.1 hypothetical protein Csa_010531 [Cucumis sativus])

HSP 1 Score: 982 bits (2539), Expect = 0.0
Identity = 501/502 (99.80%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
           MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360

Query: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
           PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420

Query: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
           PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480

Query: 481 GGRRAGAVQQTQQPVPMMQQQV 502
           GGRRAGAVQQTQQPVPMMQQQ+
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQM 502

[Close]

BLAST of Cucsat.G15556.T4 vs. NCBI nr
Match: XP_008456142.1 (PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Cucumis melo] >TYK13938.1 polyadenylate-binding protein 2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 971 bits (2510), Expect = 0.0
Identity = 496/502 (98.80%), Postives = 497/502 (99.00%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MA QVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESA KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKSRCFGFVNFENADDAARAVD LNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
           MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360

Query: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
           PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR V MPASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIYP 420

Query: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
           PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480

Query: 481 GGRRAGAVQQTQQPVPMMQQQV 502
           GGRRAGAVQQTQQPVPMMQQQ+
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQM 502

[Close]

BLAST of Cucsat.G15556.T4 vs. NCBI nr
Match: KAA0037137.1 (polyadenylate-binding protein 2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 966 bits (2498), Expect = 0.0
Identity = 496/503 (98.61%), Postives = 497/503 (98.81%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MA QVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESA KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKSRCFGFVNFENADDAARAVD LNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKV-MRDPNGISRGSGFVAFS 360
           MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKV MRDPNGISRGSGFVAFS
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVVMRDPNGISRGSGFVAFS 360

Query: 361 TPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIY 420
           TPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR V MPASVAPRMPIY
Sbjct: 361 TPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIY 420

Query: 421 PPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR 480
           PPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR
Sbjct: 421 PPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR 480

Query: 481 PGGRRAGAVQQTQQPVPMMQQQV 502
           PGGRRAGAVQQTQQPVPMMQQQ+
Sbjct: 481 PGGRRAGAVQQTQQPVPMMQQQM 503

[Close]

BLAST of Cucsat.G15556.T4 vs. NCBI nr
Match: XP_038892025.1 (polyadenylate-binding protein 2-like [Benincasa hispida])

HSP 1 Score: 964 bits (2493), Expect = 0.0
Identity = 490/502 (97.61%), Postives = 496/502 (98.80%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MA QVQAQPQNAISG+NPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MAAQVQAQPQNAISGVNPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESA KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKSRCFGFVNFENADDAARAVD LNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
           MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360

Query: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
           P+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR VPM ASVAPRMPIYP
Sbjct: 361 PEEASRALIEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVPMAASVAPRMPIYP 420

Query: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
           PGGPGIGQQ+F+GQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQVFFGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480

Query: 481 GGRRAGAVQQTQQPVPMMQQQV 502
           GGRRAGAVQQTQQPVPMMQQQ+
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQM 502

[Close]

BLAST of Cucsat.G15556.T4 vs. NCBI nr
Match: KAG6576947.1 (Polyadenylate-binding protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 936 bits (2420), Expect = 0.0
Identity = 477/502 (95.02%), Postives = 488/502 (97.21%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MA QVQ+QPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MAAQVQSQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEES  KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESGQKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKN SETT+EE+LN  FSEFGT+TSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNFSETTSEEELNDVFSEFGTITSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKS+CFGFVNFE+ADDAARAVD LNGKLVDDKEWYVGKAQKKSEREVELK+RFEQT
Sbjct: 241 RDADGKSKCFGFVNFESADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKNRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
           MKEAADKYQGANLYIKNLDDSI DDKLKELFA FGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIVDDKLKELFASFGTITSCKVMRDPNGISRGSGFVAFST 360

Query: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
           P+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR V M ASVAPRMP+YP
Sbjct: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVSMAASVAPRMPMYP 420

Query: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
           PGGPGIGQQLFYGQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480

Query: 481 GGRRAGAVQQTQQPVPMMQQQV 502
           GGRRAGAVQQ QQPVPMMQQQ+
Sbjct: 481 GGRRAGAVQQNQQPVPMMQQQM 502

[Close]

BLAST of Cucsat.G15556.T4 vs. ExPASy TrEMBL
Match: A0A0A0L989 (Polyadenylate-binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G202720 PE=3 SV=1)

HSP 1 Score: 982 bits (2539), Expect = 0.0
Identity = 501/502 (99.80%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
           MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360

Query: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
           PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420

Query: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
           PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480

Query: 481 GGRRAGAVQQTQQPVPMMQQQV 502
           GGRRAGAVQQTQQPVPMMQQQ+
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQM 502

[Close]

BLAST of Cucsat.G15556.T4 vs. ExPASy TrEMBL
Match: A0A5D3CRX0 (Polyadenylate-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001390 PE=3 SV=1)

HSP 1 Score: 971 bits (2510), Expect = 0.0
Identity = 496/502 (98.80%), Postives = 497/502 (99.00%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MA QVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESA KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKSRCFGFVNFENADDAARAVD LNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
           MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360

Query: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
           PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR V MPASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIYP 420

Query: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
           PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480

Query: 481 GGRRAGAVQQTQQPVPMMQQQV 502
           GGRRAGAVQQTQQPVPMMQQQ+
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQM 502

[Close]

BLAST of Cucsat.G15556.T4 vs. ExPASy TrEMBL
Match: A0A1S3C385 (Polyadenylate-binding protein OS=Cucumis melo OX=3656 GN=LOC103496171 PE=3 SV=1)

HSP 1 Score: 971 bits (2510), Expect = 0.0
Identity = 496/502 (98.80%), Postives = 497/502 (99.00%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MA QVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESA KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKSRCFGFVNFENADDAARAVD LNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
           MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360

Query: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
           PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR V MPASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIYP 420

Query: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
           PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480

Query: 481 GGRRAGAVQQTQQPVPMMQQQV 502
           GGRRAGAVQQTQQPVPMMQQQ+
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQM 502

[Close]

BLAST of Cucsat.G15556.T4 vs. ExPASy TrEMBL
Match: A0A5A7T6F2 (Polyadenylate-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G00430 PE=3 SV=1)

HSP 1 Score: 966 bits (2498), Expect = 0.0
Identity = 496/503 (98.61%), Postives = 497/503 (98.81%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MA QVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESA KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKSRCFGFVNFENADDAARAVD LNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKV-MRDPNGISRGSGFVAFS 360
           MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKV MRDPNGISRGSGFVAFS
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVVMRDPNGISRGSGFVAFS 360

Query: 361 TPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIY 420
           TPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR V MPASVAPRMPIY
Sbjct: 361 TPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIY 420

Query: 421 PPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR 480
           PPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR
Sbjct: 421 PPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR 480

Query: 481 PGGRRAGAVQQTQQPVPMMQQQV 502
           PGGRRAGAVQQTQQPVPMMQQQ+
Sbjct: 481 PGGRRAGAVQQTQQPVPMMQQQM 503

[Close]

BLAST of Cucsat.G15556.T4 vs. ExPASy TrEMBL
Match: A0A6J1E7L0 (Polyadenylate-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111430615 PE=3 SV=1)

HSP 1 Score: 932 bits (2408), Expect = 0.0
Identity = 475/502 (94.62%), Postives = 486/502 (96.81%), Query Frame = 0


Query: 1   MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
           MA QVQ+Q QNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1   MAAQVQSQSQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60

Query: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
           CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61  CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120

Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
           IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEES  KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESGQKAIEKLNGM 180

Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
           LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKN SETT+EE+LN  FSEFGT+TSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNFSETTSEEELNDVFSEFGTITSIVVM 240

Query: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
           RDADGKS+CFGFVNFE+ DDAARAVD LNGKLVDDKEWYVGKAQKKSEREVELK+RFEQT
Sbjct: 241 RDADGKSKCFGFVNFESVDDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKNRFEQT 300

Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
           MKEAADKYQGANLYIKNLDDSI DDKLKELFA FGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIVDDKLKELFASFGTITSCKVMRDPNGISRGSGFVAFST 360

Query: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
           P+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR V M ASVAPRMP+YP
Sbjct: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVSMAASVAPRMPMYP 420

Query: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
           PGGPGIGQQLFYGQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480

Query: 481 GGRRAGAVQQTQQPVPMMQQQV 502
           GGRRAGAVQQ QQPVPMMQQQ+
Sbjct: 481 GGRRAGAVQQNQQPVPMMQQQM 502

The following BLAST results are available for this feature:

BLAST of Cucsat.G15556.T4 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42731	1.7e-213	72.73	Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=...	[more]
Q9FXA2	1.9e-212	73.96	Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=...	[more]
O22173	1.8e-181	65.17	Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=...	[more]
O64380	7.7e-145	56.83	Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PAB3 PE=2 SV=...	[more]
Q05196	2.0e-140	53.92	Polyadenylate-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=PAB5 PE=1 SV=...	[more]

BLAST of Cucsat.G15556.T4 vs. NCBI nr


Match Name	Identity	Description
XP_004140705.1	99.80	polyadenylate-binding protein 8 [Cucumis sativus] >KGN57514.1 hypothetical prote...	[more]
XP_008456142.1	98.80	PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Cucumis melo] >TYK13...	[more]
KAA0037137.1	98.61	polyadenylate-binding protein 2-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038892025.1	97.61	polyadenylate-binding protein 2-like [Benincasa hispida]	[more]
KAG6576947.1	95.02	Polyadenylate-binding protein 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cucsat.G15556.T4 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0L989	99.80	Polyadenylate-binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G202720 PE=3 SV...	[more]
A0A5D3CRX0	98.80	Polyadenylate-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3C385	98.80	Polyadenylate-binding protein OS=Cucumis melo OX=3656 GN=LOC103496171 PE=3 SV=1	[more]
A0A5A7T6F2	98.61	Polyadenylate-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A6J1E7L0	94.62	Polyadenylate-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111430615 PE=3...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 30..103 e-value: 4.2E-24 score: 96.1 coord: 312..384 e-value: 1.2E-24 score: 97.8 coord: 209..281 e-value: 7.1E-28 score: 108.6 coord: 118..190 e-value: 1.3E-24 score: 97.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 31..101 e-value: 1.2E-18 score: 66.7 coord: 313..381 e-value: 2.4E-18 score: 65.7 coord: 210..278 e-value: 2.8E-23 score: 81.5 coord: 119..187 e-value: 6.0E-21 score: 74.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 117..189 score: 18.359171
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 208..285 score: 19.297218
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 311..388 score: 18.887888
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 29..107 score: 18.73439
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 312..384 e-value: 2.6 score: 9.9 coord: 30..103 e-value: 4.4 score: 7.5 coord: 118..190 e-value: 2.1 score: 10.9 coord: 209..281 e-value: 0.9 score: 14.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 119..198 e-value: 9.7E-24 score: 85.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 296..395 e-value: 4.4E-27 score: 96.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..118 e-value: 6.4E-26 score: 92.9 coord: 199..295 e-value: 5.1E-27 score: 96.5
IPR006515	Polyadenylate binding protein, human types 1, 2, 3, 4	TIGRFAM	TIGR01628	TIGR01628	coord: 30..492 e-value: 3.1E-191 score: 635.5
None	No IPR available	PANTHER	PTHR24012:SF824	POLYADENYLATE-BINDING PROTEIN	coord: 18..502
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 18..502
None	No IPR available	CDD	cd12380	RRM3_I_PABPs	coord: 207..286 e-value: 1.5673E-38 score: 133.853
None	No IPR available	CDD	cd12381	RRM4_I_PABPs	coord: 310..388 e-value: 4.6098E-49 score: 162.018
None	No IPR available	CDD	cd12378	RRM1_I_PABPs	coord: 30..109 e-value: 1.15458E-46 score: 155.385
None	No IPR available	CDD	cd12379	RRM2_I_PABPs	coord: 115..191 e-value: 2.84422E-49 score: 162.336
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 29..198
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 208..392

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G15556	Cucsat.G15556	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15556.T4.E1	Cucsat.G15556.T4.E1	exon
Cucsat.G15556.T4.E2	Cucsat.G15556.T4.E2	exon
Cucsat.G15556.T4.E3	Cucsat.G15556.T4.E3	exon
Cucsat.G15556.T4.E4	Cucsat.G15556.T4.E4	exon
Cucsat.G15556.T4.E5	Cucsat.G15556.T4.E5	exon
Cucsat.G15556.T4.E6	Cucsat.G15556.T4.E6	exon
Cucsat.G15556.T4.E7	Cucsat.G15556.T4.E7	exon
Cucsat.G15556.T4.E8	Cucsat.G15556.T4.E8	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15556.T4.C1	Cucsat.G15556.T4.C1	CDS
Cucsat.G15556.T4.C2	Cucsat.G15556.T4.C2	CDS
Cucsat.G15556.T4.C3	Cucsat.G15556.T4.C3	CDS
Cucsat.G15556.T4.C4	Cucsat.G15556.T4.C4	CDS
Cucsat.G15556.T4.C5	Cucsat.G15556.T4.C5	CDS
Cucsat.G15556.T4.C6	Cucsat.G15556.T4.C6	CDS
Cucsat.G15556.T4.C7	Cucsat.G15556.T4.C7	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15556.T4	Cucsat.G15556.T4-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003730	mRNA 3'-UTR binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0008266	poly(U) RNA binding