Cucsat.G15461.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGTAAGCGAAGTTATCCATCTATTCGCGCCAGAGCTCCCCCATAGCTCTCGCCACTGCTACGGCGAGTCATCGGCCACCGTATATAACGATGCTTCACTGCCACTTTACGCCTCGCCCAATTACGCCGTTTGTTACTTGTCAGCTCTCTACCAGCTCACTGCGCATTCCCTCTCCTTCGCAGCCGACCCCACTCCCGCCACCACTGCTGTCTTTAGCTGCAAAATCAATTCCCGACTCAGTATCCTCGCCGGCCTGCTCACTTCAGTGCACTCACTTTCAATCGTATGTTACACTTCCATTACCGTTCTATTCTCTGAACCTCATCGATCGACTAATTCTTTTTTGTTGCTGAACCTTTTAGGTGCTCCGGATGTACTCACGAGTTCGACCTCCACCGGCCGGTCATCGTTGAGGAGGCGACTCAGTTCTTCAACGACCTTGGAGTATTAGATTTTACGTTTGATAGTTGCAAACTGGTAGACTTGCTTTTGCCTATCAATTGTTAGTCTTGATAGAATTCTTCTAATCCATAAAATAATTGTTTGGTTCTTTTTTTTTTTTTTTGGGTACATTGATGTGTTTTTAGTGGGGATGGAGATGCCGTGCAAAATTGGCGGTTCGTGGCTCGTCCATAAGCCCTATGATTGGACTCTATCAAGAGGGAACTCATAATGTTGTGGATATTCCTGATTGCAAAGGTTTCATTTGAACTTATCTTAAGGTTTTGCTTTGTTCTTGTTTTTCACCAATTTTGATTGTTTAAGTTAAGAAATGTACTGGAATTTTCAGCTCATCACCCCAATATAAATGCGGCAGTTGAATTGTTAAAGCGAGGTATGTTCTTTATGAAGCTCATATGATATGAATGCACATTTCTTCTATTTGTAAATTTAGGTGCTGATATAACGGCTGAATTATTTATATTATTTGGGGTGCTGTTTCAAGGAATCACTGAATTCGACATAGAGCCTTATGATGAAGATCAGGGGACTGGTGACTTGCGATATGTTCAGGTTACTAGTGAAAGACTCCTCCAATGAATATAGAGGATGTACATTCGTTTGTTTAATGGTGATGCTAATGATAATACTAAGATAGTTTTGATGCAGCTTGCTGTGACAACGTATAGCACATCCCTTCCTTCCTCAGAAAGATACAAAAATGGTTACAAGCTAACTAATCAATTGATGTTAGATTAGACCATCACTTATGGTCTTAGAAAATCGAGAATTGATTGACTTATCTATGTTTTCAGGTAAGATACAGATAGCATTAGTTTGGAATTCGAGGAACGAGACTTCACAGAATTCTGACAAGCTAAATGCTTTAGCCAATGTGAGTTTTAAAACTCTTCACCCTAAGAAACAATCATGCTTGGCAAGATTTCCACTTACACTAATTTTGCTTTAATGTACTGAATTACAGTTTTTATGGAAAAATGGTGGTGTCCGGAGTAACACTCATTTAGTTCATTCTGTGTGGGCAAATTTTCAAACATCGACTAACAATGTAAGTTTCTACAACATAAGAGTCGGAGTAATGAATGTGCATTTCTATCATTTGTTGCTAAGGTTGCTACATGGTATACAAATTTTTTTCTTGGCTGAATCAATTCATTTTCACTTGTACTCGCAGGTAATATTTGGCAATAGATGGAGACATCTTTTAGGTGAAAGAGATTTTTGGGAACATGTTGGAGGAATAGATATTTGTCTGACACCATCGAGTTTTGGCCAAGCAAATACCCAGGTTCTTAATATTTACGTCTAAGATTTCAGAAAGTATTTTAATTGCCAAGAAATAGGAAATTGAGATCCAGTAAGTCCTCCAAAGAAAACTCCTACTCGCCGGTATCAGATCTTTGGGGGTCTTGATACTGAGGAAATATATATTAGTTACTTACTATTTTGGCTGGGGATTCGGACTTGTTTTGATATCCTGCGGGGTTCCTGAATCTTAACTGCCTAGTCGCTGATTGTCAATATAACCTTCTTAGAAAATTATTTGAAGGAATATGTCGTTGCTGCAACTACAACTAAGAATGAGTTTGGGCTGATTTGAAAGATTTAAAAAATGGTGTCCCAAACTTCATCTTACATCCACGCTAAAACATTGTATGATTACTCTGCTCTCAAAATGCCCAAATGAGCGGCAACCATGGGGGACTATGGGATTAGTAAAATAAACTTTGGTTTTGTTCTTCAAAGGGTGGCAAAAAGTCAGCTGAAGATAGAAATTATGGGAGGCAGCTGGATTTTACACAAAGGATTGAGAGATTGGAAAGCCTAATCAAATTGTGCTCGAGAAAGAGCAAAAAGTATTAAGGTGAACTCCCAGCCTTCTGCATCGTTTTCATTCGGGACACATAAATGGGGGCTGAGGCCGGCCACTGGAGTTTATGTTCTGAAATCCATCACTGATTTCCTGGTGAAAGAAAATATCCCTATAAAGACTCGCTGTTCCTTTGTTTTTAGAACTAAAAATGGTTTTACATAGATCTTTGGGCTGGGAAATCTCTAACATGCATAAGGTATTGGGAATTGAGACTTACAAAATTTTCCTGCCTTCAGAGTCTAGAGCTTACAGCAGGATTAGAAATTTCAATTCCAGCAACTGACGCTAGTTTCCAAATTTACAGATCTTAGTTATTAGTGTTTTATGCCTGTTAAATTTTTTTTATTGGCTTCACATCCCGACTATCCAATTAGATCATCTAACATATACTCTTTTCTACCAGGCTTTTGATAGTTTGCTCCGTAAGTTGCAGAAGTATGTTCCTTATGGAGCATCAGTTGCTGATCTGTATGCAGGAGCTGGTGTAATTGGATTATCACTAGCTGCCACAAGGAAATGCAGGTAAGGACTAGGACAAATTTGCATGCTTAAAGTTTCATTGCGTTCACGTGTACGGAAATTGATAAACCAATGTTGCTTCCGTTTTCAGATCTGTCAAGTGTGTTGAGGTCAACAAAGAATCTAAGTTATCATTTGAGAAGACAGTTGAACGTCTGCCAGACCGAGTTAATAGCAGTATCAGCTGGCACCATGCAGACACGTCGAAAGTTGGTACTCCAGCCCTAGTAGTGTTTAATTACTCATTACTTTGCTACGTCTTGAGAAATCCATTTCTATTGGTGGCATCTCATTTATTTTAGTGATTCTTGTTTACTTCATGTGAGATTTACCCTGCTGTTATACTCAGAGAAAATTAATTGGTTCTTTTCTTTTTGCTGTATCTACTAATTGTACAGGAGCCTCTTTCTTGGATTATGGGATCAGACGTAGTTGTTGTGGATCCACCGCGAAAAGGTTTGGATGCATCACTTGCTAATATGTTGCGAGATATATCATCGTTTAAACGTAAAGTGAAGTTATTATCTAAAAGGTTGGATTTACTTTTAGTCTTTTACTCATCTTGGGGTAGTTTCAAGACAAAGTTCATTTGGATTACCTCTAAGGCTTCTGAATTTTCCTTTCCTGACACATAATTTCACTGTGCTTTGAATATCAATCTACAGCCCACCTTTGATGGACGATAAGAAAGATGAAAAGAGGCCATGGGTGTTACGTGCAAGAGAAGAAACAGTCCAAATAGGGAGTACTACAGATTCAGAACCTAATCAATCCCTGCCTCAGACCCTTATTTATATAAGCTGTGGATGGGAAAGCTTCAAGGAGGTAAGTTTTTAATAACGCTGCCATTAAAATTCTATCAAGCACAACTGCTTTTCTGCTCTCCTTCCATGATTTCTGAGCTACTCAGCATGTACTTTTGACAATATGTGCATTAAAAATATAGATTATAGCTAAACTTTCCTTTTATAGGATTGCAAAATGTTACTGTCTAACAAGGCGTGGCATTTGGAGAAGGCCCATGGTTTTAATTTCTTTCCTGGCACTCAGAGGTAATGATCATATTTCCTTTGCGTTGATTCTTTTAGGTTAAACCATCATTAAGCGATTAGTAAACCATGCCCATGCTAGAGAATTGATGATATGACTTTTCCTTTTTCTTTGAAATGCTTGTATTTTTAAAATAAGAAAGATTGATTCGTGCTTCCGCTTTTGATCCTTACACAACACCACAACCTAGGTTCTTTTGCTTGTTGTATAATCCTTTCTACTCTGAGTTTTTGTTTCATTATTATCATTATTAATAAAGAGACTTTGTTTCTTTTTCAAAAAATAAAAAACAGTACAATTGTCCTTAATTAAACTCTTCTTTTCCTTTCAACTTCGAGTCAAAGATAACAAAAAATGTGTCCTTGTAGCGTTTTTTACTTTGAAAGGTTATCTGTAAAGAAATGAGCATTCCCAATTTCCAAATCATAATTATCGGTACTCTCTTCTAGATCTCAACATCAATCATCTACTTTGGAACCAGATTTGAAGTGTCTCCAATTTAAGTGACCCAAGACATTGATACCTCTTGCATTCCTTCTTATTCTCCAATGTTTTTCGACAGCATTGGTCATTTGTACTCATGAATTTCAATATTTGCAGTATTGAGGTTTTGGCCATTTTCAAGAGGGGTCAAGGAGTTCCACAGAAAAAAAAGAAAGTGGTGAAGAAGAAAAAGAAACGGCTGTGAGAGTATCCTGTCATTATATTTGGTGGAAGCTTCAAGCATATCTAGTTGAAAGCATCAATATATACATTGTACACTGTTTGGAGAAAACACAATGAAGCAAGCAAATTGAAGCTGCAGAGGAAGAACAAGTCATCTAGAGGATTTTCTCTTTACAGTGTAATAAGTGTTTGTCTGGGCATTTAAATTGTAAAGCCATGACTAAATAGTAATCCCCATTTGGCTAGAGAGAACTTTTTGCAGGTTTCTTTTCTCCTCTCTTAGGACTTAGACTATACTGTGTTGTTCCTCAGAGAAATTTAAGGATGTCCAAGGGATGCTTTGGGCAAGGTGAGGACTCCAAAGAGTTCTCGACAGAGTTTGAATTCCTAGAGTCCATGATACAAACAAAAAAAAAATTAATACAAAATTTAAAGTTACTAACATATTTGTAAGCCAATTGAGCTATGCCGTAAAAGCTATGTGCTTTGGTCCTTGAACTGACA ATGTACATTCGTTTGTTTAATGGTGATGCTAATGATAATACTAAGATAGTTTTGATGCAGCTTGCTGTGACAACGTATAGCACATCCCTTCCTTCCTCAGAAAGATACAAAAATGGTAAGATACAGATAGCATTAGTTTGGAATTCGAGGAACGAGACTTCACAGAATTCTGACAAGCTAAATGCTTTAGCCAATTTTTTATGGAAAAATGGTGGTGTCCGGAGTAACACTCATTTAGTTCATTCTGTGTGGGCAAATTTTCAAACATCGACTAACAATGTAATATTTGGCAATAGATGGAGACATCTTTTAGGTGAAAGAGATTTTTGGGAACATGTTGGAGGAATAGATATTTGTCTGACACCATCGAGTTTTGGCCAAGCAAATACCCAGGCTTTTGATAGTTTGCTCCGTAAGTTGCAGAAGTATGTTCCTTATGGAGCATCAGTTGCTGATCTGTATGCAGGAGCTGGTGTAATTGGATTATCACTAGCTGCCACAAGGAAATGCAGATCTGTCAAGTGTGTTGAGGTCAACAAAGAATCTAAGTTATCATTTGAGAAGACAGTTGAACGTCTGCCAGACCGAGTTAATAGCAGTATCAGCTGGCACCATGCAGACACGTCGAAAGAGCCTCTTTCTTGGATTATGGGATCAGACGTAGTTGTTGTGGATCCACCGCGAAAAGGTTTGGATGCATCACTTGCTAATATGTTGCGAGATATATCATCGTTTAAACGTAAAGTGAAGTTATTATCTAAAAGCCCACCTTTGATGGACGATAAGAAAGATGAAAAGAGGCCATGGGTGTTACGTGCAAGAGAAGAAACAGTCCAAATAGGGAGTACTACAGATTCAGAACCTAATCAATCCCTGCCTCAGACCCTTATTTATATAAGCTGTGGATGGGAAAGCTTCAAGGAGGATTGCAAAATGTTACTGTCTAACAAGGCGTGGCATTTGGAGAAGGCCCATGGTTTTAATTTCTTTCCTGGCACTCAGAGTATTGAGGTTTTGGCCATTTTCAAGAGGGGTCAAGGAGTTCCACAGAAAAAAAAGAAAGTGGTGAAGAAGAAAAAGAAACGGCTGTGA MYIRLFNGDANDNTKIVLMQLAVTTYSTSLPSSERYKNGKIQIALVWNSRNETSQNSDKLNALANFLWKNGGVRSNTHLVHSVWANFQTSTNNVIFGNRWRHLLGERDFWEHVGGIDICLTPSSFGQANTQAFDSLLRKLQKYVPYGASVADLYAGAGVIGLSLAATRKCRSVKCVEVNKESKLSFEKTVERLPDRVNSSISWHHADTSKEPLSWIMGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREETVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSIEVLAIFKRGQGVPQKKKKVVKKKKKRL Homology
BLAST of Cucsat.G15461.T2 vs. ExPASy Swiss-Prot
Match: Q6M9M7 (Uncharacterized RNA methyltransferase pc1998 OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=pc1998 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.1e-40 Identity = 99/307 (32.25%), Postives = 149/307 (48.53%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. ExPASy Swiss-Prot
Match: Q9KF10 (Uncharacterized RNA methyltransferase BH0687 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=BH0687 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.4e-09 Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. ExPASy Swiss-Prot
Match: Q8DUV4 (Uncharacterized RNA methyltransferase SMU_788 OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) OX=210007 GN=SMU_788 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.5e-09 Identity = 57/187 (30.48%), Postives = 90/187 (48.13%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. ExPASy Swiss-Prot
Match: Q8DPY7 (Uncharacterized RNA methyltransferase spr0932 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=spr0932 PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 9.4e-09 Identity = 48/160 (30.00%), Postives = 78/160 (48.75%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. ExPASy Swiss-Prot
Match: Q97R12 (Uncharacterized RNA methyltransferase SP_1029 OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=SP_1029 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.6e-08 Identity = 47/160 (29.38%), Postives = 75/160 (46.88%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. NCBI nr
Match: XP_011651563.1 (uncharacterized protein LOC101217214 [Cucumis sativus] >KGN58187.1 hypothetical protein Csa_017431 [Cucumis sativus]) HSP 1 Score: 689 bits (1778), Expect = 6.11e-247 Identity = 344/345 (99.71%), Postives = 345/345 (100.00%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. NCBI nr
Match: XP_016900814.1 (PREDICTED: uncharacterized RNA methyltransferase pc1998 isoform X1 [Cucumis melo]) HSP 1 Score: 684 bits (1765), Expect = 6.97e-245 Identity = 342/349 (97.99%), Postives = 345/349 (98.85%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. NCBI nr
Match: XP_008450089.1 (PREDICTED: uncharacterized RNA methyltransferase pc1998 isoform X2 [Cucumis melo] >KAA0042886.1 putative RNA methyltransferase pc1998 isoform X2 [Cucumis melo var. makuwa] >TYK05289.1 putative RNA methyltransferase pc1998 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 678 bits (1749), Expect = 1.58e-242 Identity = 339/345 (98.26%), Postives = 341/345 (98.84%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. NCBI nr
Match: XP_038900090.1 (uncharacterized RNA methyltransferase pc1998 isoform X1 [Benincasa hispida]) HSP 1 Score: 651 bits (1680), Expect = 4.82e-232 Identity = 327/345 (94.78%), Postives = 338/345 (97.97%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. NCBI nr
Match: XP_016900815.1 (PREDICTED: uncharacterized RNA methyltransferase pc1998 isoform X3 [Cucumis melo]) HSP 1 Score: 637 bits (1642), Expect = 2.52e-226 Identity = 313/320 (97.81%), Postives = 316/320 (98.75%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. ExPASy TrEMBL
Match: A0A0A0LBW8 (MTS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G588460 PE=3 SV=1) HSP 1 Score: 689 bits (1778), Expect = 2.96e-247 Identity = 344/345 (99.71%), Postives = 345/345 (100.00%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. ExPASy TrEMBL
Match: A0A1S4DXU9 (uncharacterized RNA methyltransferase pc1998 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491779 PE=3 SV=1) HSP 1 Score: 684 bits (1765), Expect = 3.37e-245 Identity = 342/349 (97.99%), Postives = 345/349 (98.85%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. ExPASy TrEMBL
Match: A0A5A7TLM0 (Putative RNA methyltransferase pc1998 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001090 PE=3 SV=1) HSP 1 Score: 678 bits (1749), Expect = 7.67e-243 Identity = 339/345 (98.26%), Postives = 341/345 (98.84%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. ExPASy TrEMBL
Match: A0A1S3BNI0 (uncharacterized RNA methyltransferase pc1998 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491779 PE=3 SV=1) HSP 1 Score: 678 bits (1749), Expect = 7.67e-243 Identity = 339/345 (98.26%), Postives = 341/345 (98.84%), Query Frame = 0
BLAST of Cucsat.G15461.T2 vs. ExPASy TrEMBL
Match: A0A1S4DYL9 (uncharacterized RNA methyltransferase pc1998 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491779 PE=3 SV=1) HSP 1 Score: 637 bits (1642), Expect = 1.22e-226 Identity = 313/320 (97.81%), Postives = 316/320 (98.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|