Cucsat.G15461 (gene) Cucumber (B10) v3

Overview
NameCucsat.G15461
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionMTS domain-containing protein
Locationctg2009: 5908586 .. 5913571 (-)
RNA-Seq ExpressionCucsat.G15461
SyntenyCucsat.G15461
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAAGCGAAGTTATCCATCTATTCGCGCCAGAGCTCCCCCATAGCTCTCGCCACTGCTACGGCGAGTCATCGGCCACCGTATATAACGATGCTTCACTGCCACTTTACGCCTCGCCCAATTACGCCGTTTGTTACTTGTCAGCTCTCTACCAGCTCACTGCGCATTCCCTCTCCTTCGCAGCCGACCCCACTCCCGCCACCACTGCTGTCTTTAGCTGCAAAATCAATTCCCGACTCAGTATCCTCGCCGGCCTGCTCACTTCAGTGCACTCACTTTCAATCGTATGTTACACTTCCATTACCGTTCTATTCTCTGAACCTCATCGATCGACTAATTCTTTTTTGTTGCTGAACCTTTTAGGTGCTCCGGATGTACTCACGAGTTCGACCTCCACCGGCCGGTCATCGTTGAGGAGGCGACTCAGTTCTTCAACGACCTTGGAGTATTAGATTTTACGTTTGATAGTTGCAAACTGGTAGACTTGCTTTTGCCTATCAATTGTTAGTCTTGATAGAATTCTTCTAATCCATAAAATAATTGTTTGGTTCTTTTTTTTTTTTTTTGGGTACATTGATGTGTTTTTAGTGGGGATGGAGATGCCGTGCAAAATTGGCGGTTCGTGGCTCGTCCATAAGCCCTATGATTGGACTCTATCAAGAGGGAACTCATAATGTTGTGGATATTCCTGATTGCAAAGGTTTCATTTGAACTTATCTTAAGGTTTTGCTTTGTTCTTGTTTTTCACCAATTTTGATTGTTTAAGTTAAGAAATGTACTGGAATTTTCAGCTCATCACCCCAATATAAATGCGGCAGTTGAATTGTTAAAGCGAGGTATGTTCTTTATGAAGCTCATATGATATGAATGCACATTTCTTCTATTTGTAAATTTAGGTGCTGATATAACGGCTGAATTATTTATATTATTTGGGGTGCTGTTTCAAGGAATCACTGAATTCGACATAGAGCCTTATGATGAAGATCAGGGGACTGGTGACTTGCGATATGTTCAGGTTACTAGTGAAAGACTCCTCCAATGAATATAGAGGATGTACATTCGTTTGTTTAATGGTGATGCTAATGATAATACTAAGATAGTTTTGATGCAGCTTGCTGTGACAACGTATAGCACATCCCTTCCTTCCTCAGAAAGATACAAAAATGGTTACAAGCTAACTAATCAATTGATGTTAGATTAGACCATCACTTATGGTCTTAGAAAATCGAGAATTGATTGACTTATCTATGTTTTCAGGTAAGATACAGATAGCATTAGTTTGGAATTCGAGGAACGAGACTTCACAGAATTCTGACAAGCTAAATGCTTTAGCCAATGTGAGTTTTAAAACTCTTCACCCTAAGAAACAATCATGCTTGGCAAGATTTCCACTTACACTAATTTTGCTTTAATGTACTGAATTACAGTTTTTATGGAAAAATGGTGGTGTCCGGAGTAACACTCATTTAGTTCATTCTGTGTGGGCAAATTTTCAAACATCGACTAACAATGTAAGTTTCTACAACATAAGAGTCGGAGTAATGAATGTGCATTTCTATCATTTGTTGCTAAGGTTGCTACATGGTATACAAATTTTTTTCTTGGCTGAATCAATTCATTTTCACTTGTACTCGCAGGTAATATTTGGCAATAGATGGAGACATCTTTTAGGTGAAAGAGATTTTTGGGAACATGTTGGAGGAATAGATATTTGTCTGACACCATCGAGTTTTGGCCAAGCAAATACCCAGGTTCTTAATATTTACGTCTAAGATTTCAGAAAGTATTTTAATTGCCAAGAAATAGGAAATTGAGATCCAGTAAGTCCTCCAAAGAAAACTCCTACTCGCCGGTATCAGATCTTTGGGGGTCTTGATACTGAGGAAATATATATTAGTTACTTACTATTTTGGCTGGGGATTCGGACTTGTTTTGATATCCTGCGGGGTTCCTGAATCTTAACTGCCTAGTCGCTGATTGTCAATATAACCTTCTTAGAAAATTATTTGAAGGAATATGTCGTTGCTGCAACTACAACTAAGAATGAGTTTGGGCTGATTTGAAAGATTTAAAAAATGGTGTCCCAAACTTCATCTTACATCCACGCTAAAACATTGTATGATTACTCTGCTCTCAAAATGCCCAAATGAGCGGCAACCATGGGGGACTATGGGATTAGTAAAATAAACTTTGGTTTTGTTCTTCAAAGGGTGGCAAAAAGTCAGCTGAAGATAGAAATTATGGGAGGCAGCTGGATTTTACACAAAGGATTGAGAGATTGGAAAGCCTAATCAAATTGTGCTCGAGAAAGAGCAAAAAGTATTAAGGTGAACTCCCAGCCTTCTGCATCGTTTTCATTCGGGACACATAAATGGGGGCTGAGGCCGGCCACTGGAGTTTATGTTCTGAAATCCATCACTGATTTCCTGGTGAAAGAAAATATCCCTATAAAGACTCGCTGTTCCTTTGTTTTTAGAACTAAAAATGGTTTTACATAGATCTTTGGGCTGGGAAATCTCTAACATGCATAAGGTATTGGGAATTGAGACTTACAAAATTTTCCTGCCTTCAGAGTCTAGAGCTTACAGCAGGATTAGAAATTTCAATTCCAGCAACTGACGCTAGTTTCCAAATTTACAGATCTTAGTTATTAGTGTTTTATGCCTGTTAAATTTTTTTTATTGGCTTCACATCCCGACTATCCAATTAGATCATCTAACATATACTCTTTTCTACCAGGCTTTTGATAGTTTGCTCCGTAAGTTGCAGAAGTATGTTCCTTATGGAGCATCAGTTGCTGATCTGTATGCAGGAGCTGGTGTAATTGGATTATCACTAGCTGCCACAAGGAAATGCAGGTAAGGACTAGGACAAATTTGCATGCTTAAAGTTTCATTGCGTTCACGTGTACGGAAATTGATAAACCAATGTTGCTTCCGTTTTCAGATCTGTCAAGTGTGTTGAGGTCAACAAAGAATCTAAGTTATCATTTGAGAAGACAGTTGAACGTCTGCCAGACCGAGTTAATAGCAGTATCAGCTGGCACCATGCAGACACGTCGAAAGTTGGTACTCCAGCCCTAGTAGTGTTTAATTACTCATTACTTTGCTACGTCTTGAGAAATCCATTTCTATTGGTGGCATCTCATTTATTTTAGTGATTCTTGTTTACTTCATGTGAGATTTACCCTGCTGTTATACTCAGAGAAAATTAATTGGTTCTTTTCTTTTTGCTGTATCTACTAATTGTACAGGAGCCTCTTTCTTGGATTATGGGATCAGACGTAGTTGTTGTGGATCCACCGCGAAAAGGTTTGGATGCATCACTTGCTAATATGTTGCGAGATATATCATCGTTTAAACGTAAAGTGAAGTTATTATCTAAAAGGTTGGATTTACTTTTAGTCTTTTACTCATCTTGGGGTAGTTTCAAGACAAAGTTCATTTGGATTACCTCTAAGGCTTCTGAATTTTCCTTTCCTGACACATAATTTCACTGTGCTTTGAATATCAATCTACAGCCCACCTTTGATGGACGATAAGAAAGATGAAAAGAGGCCATGGGTGTTACGTGCAAGAGAAGAAACAGTCCAAATAGGGAGTACTACAGATTCAGAACCTAATCAATCCCTGCCTCAGACCCTTATTTATATAAGCTGTGGATGGGAAAGCTTCAAGGAGGTAAGTTTTTAATAACGCTGCCATTAAAATTCTATCAAGCACAACTGCTTTTCTGCTCTCCTTCCATGATTTCTGAGCTACTCAGCATGTACTTTTGACAATATGTGCATTAAAAATATAGATTATAGCTAAACTTTCCTTTTATAGGATTGCAAAATGTTACTGTCTAACAAGGCGTGGCATTTGGAGAAGGCCCATGGTTTTAATTTCTTTCCTGGCACTCAGAGGTAATGATCATATTTCCTTTGCGTTGATTCTTTTAGGTTAAACCATCATTAAGCGATTAGTAAACCATGCCCATGCTAGAGAATTGATGATATGACTTTTCCTTTTTCTTTGAAATGCTTGTATTTTTAAAATAAGAAAGATTGATTCGTGCTTCCGCTTTTGATCCTTACACAACACCACAACCTAGGTTCTTTTGCTTGTTGTATAATCCTTTCTACTCTGAGTTTTTGTTTCATTATTATCATTATTAATAAAGAGACTTTGTTTCTTTTTCAAAAAATAAAAAACAGTACAATTGTCCTTAATTAAACTCTTCTTTTCCTTTCAACTTCGAGTCAAAGATAACAAAAAATGTGTCCTTGTAGCGTTTTTTACTTTGAAAGGTTATCTGTAAAGAAATGAGCATTCCCAATTTCCAAATCATAATTATCGGTACTCTCTTCTAGATCTCAACATCAATCATCTACTTTGGAACCAGATTTGAAGTGTCTCCAATTTAAGTGACCCAAGACATTGATACCTCTTGCATTCCTTCTTATTCTCCAATGTTTTTCGACAGCATTGGTCATTTGTACTCATGAATTTCAATATTTGCAGTATTGAGGTTTTGGCCATTTTCAAGAGGGGTCAAGGAGTTCCACAGAAAAAAAAGAAAGTGGTGAAGAAGAAAAAGAAACGGCTGTGAGAGTATCCTGTCATTATATTTGGTGGAAGCTTCAAGCATATCTAGTTGAAAGCATCAATATATACATTGTACACTGTTTGGAGAAAACACAATGAAGCAAGCAAATTGAAGCTGCAGAGGAAGAACAAGTCATCTAGAGGATTTTCTCTTTACAGTGTAATAAGTGTTTGTCTGGGCATTTAAATTGTAAAGCCATGACTAAATAGTAATCCCCATTTGGCTAGAGAGAACTTTTTGCAGGTTTCTTTTCTCCTCTCTTAGGACTTAGACTATACTGTGTTGTTCCTCAGAGAAATTTAAGGATGTCCAAGGGATGCTTTGGGCAAGGTGAGGACTCCAAAGAGTTCTCGACAGAGTTTGAATTCCTAGAGTCCATGATACAAACAAAAAAAAAATTAATACAAAATTTAAAGTTACTAACATATTTGTAAGCCAATTGAGCTATGCCGTAAAAGCTATGTGCTTTGGTCCTTGAACTGACAAAATTTAGACACAATGTAAAGAGTTAAAGACAAAATAGATG

Coding sequence (CDS)

ATGCTTCACTGCCACTTTACGCCTCGCCCAATTACGCCGTTTGTTACTTGTCAGCTCTCTACCAGCTCACTGCGCATTCCCTCTCCTTCGCAGCCGACCCCACTCCCGCCACCACTGCTGTCTTTAGCTGCAAAATCAATTCCCGACTCAGTATCCTCGCCGGCCTGCTCACTTCAGTGCACTCACTTTCAATCGTGCTCCGGATGTACTCACGAGTTCGACCTCCACCGGCCGGTCATCGTTGAGGAGGCGACTCAGTTCTTCAACGACCTTGGAGTATTAGATTTTACGTTTGATAGTTGCAAACTGTGGGGATGGAGATGCCGTGCAAAATTGGCGGTTCGTGGCTCGTCCATAAGCCCTATGATTGGACTCTATCAAGAGGGAACTCATAATGTTGTGGATATTCCTGATTGCAAAGCTCATCACCCCAATATAAATGCGGCAGTTGAATTGTTAAAGCGAGGAATCACTGAATTCGACATAGAGCCTTATGATGAAGATCAGGGGACTGGTGACTTGCGATATGTTCAGCTTGCTGTGACAACGTATAGCACATCCCTTCCTTCCTCAGAAAGATACAAAAATGGTAAGATACAGATAGCATTAGTTTGGAATTCGAGGAACGAGACTTCACAGAATTCTGACAAGCTAAATGCTTTAGCCAATTTTTTATGGAAAAATGGTGGTGTCCGGAGTAACACTCATTTAGTTCATTCTGTGTGGGCAAATTTTCAAACATCGACTAACAATGTAATATTTGGCAATAGATGGAGACATCTTTTAGGTGAAAGAGATTTTTGGGAACATGTTGGAGGAATAGATATTTGTCTGACACCATCGAGTTTTGGCCAAGCAAATACCCAGGCTTTTGATAGTTTGCTCCGTAAGTTGCAGAAGTATGTTCCTTATGGAGCATCAGTTGCTGATCTGTATGCAGGAGCTGGTGTAATTGGATTATCACTAGCTGCCACAAGGAAATGCAGATCTGTCAAGTGTGTTGAGGTCAACAAAGAATCTAAGTTATCATTTGAGAAGACAGTTGAACGTCTGCCAGACCGAGTTAATAGCAGTATCAGCTGGCACCATGCAGACACGTCGAAAGAGCCTCTTTCTTGGATTATGGGATCAGACGTAGTTGTTGTGGATCCACCGCGAAAAGGTTTGGATGCATCACTTGCTAATATGTTGCGAGATATATCATCGTTTAAACGTAAAGTGAAGTTATTATCTAAAAGCCCACCTTTGATGGACGATAAGAAAGATGAAAAGAGGCCATGGGTGTTACGTGCAAGAGAAGAAACAGTCCAAATAGGGAGTACTACAGATTCAGAACCTAATCAATCCCTGCCTCAGACCCTTATTTATATAAGCTGTGGATGGGAAAGCTTCAAGGAGGATTGCAAAATGTTACTGTCTAACAAGGCGTGGCATTTGGAGAAGGCCCATGGTTTTAATTTCTTTCCTGGCACTCAGAGTATTGAGGTTTTGGCCATTTTCAAGAGGGGTCAAGGAGTTCCACAGAAAAAAAAGAAAGTGGTGAAGAAGAAAAAGAAACGGCTGTGA

Protein sequence

MLHCHFTPRPITPFVTCQLSTSSLRIPSPSQPTPLPPPLLSLAAKSIPDSVSSPACSLQCTHFQSCSGCTHEFDLHRPVIVEEATQFFNDLGVLDFTFDSCKLWGWRCRAKLAVRGSSISPMIGLYQEGTHNVVDIPDCKAHHPNINAAVELLKRGITEFDIEPYDEDQGTGDLRYVQLAVTTYSTSLPSSERYKNGKIQIALVWNSRNETSQNSDKLNALANFLWKNGGVRSNTHLVHSVWANFQTSTNNVIFGNRWRHLLGERDFWEHVGGIDICLTPSSFGQANTQAFDSLLRKLQKYVPYGASVADLYAGAGVIGLSLAATRKCRSVKCVEVNKESKLSFEKTVERLPDRVNSSISWHHADTSKEPLSWIMGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREETVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSIEVLAIFKRGQGVPQKKKKVVKKKKKRL
Homology
[Close]
BLAST of Cucsat.G15461 vs. ExPASy Swiss-Prot
Match: Q6M9M7 (Uncharacterized RNA methyltransferase pc1998 OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=pc1998 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09
Identity = 26/55 (47.27%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 74  QSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSIEVLAIFKR 129
           QS    LIY+SCGW+SFK++ + L+S + W+L+K  G++ FPG++ IE+L +F+R
Sbjct: 330 QSSVDQLIYVSCGWDSFKKNKETLIS-QGWNLKKLEGYSLFPGSEHIELLTLFER 383

[Close]
BLAST of Cucsat.G15461 vs. ExPASy Swiss-Prot
Match: F2GA29 (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=rlmD PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.4e-05
Identity = 21/57 (36.84%), Postives = 37/57 (64.91%), Query Frame = 0 

Query: 74  QSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSIEVLAIFKRGQ 131
           ++LP+T++Y+SC   +F  D K+L+ N  + +EKA     FP T  +E++A+F + Q
Sbjct: 426 KALPKTIVYVSCNPSTFSRDAKVLI-NGGYEMEKAGVAEMFPFTHHMEMMALFTQRQ 481

[Close]
BLAST of Cucsat.G15461 vs. ExPASy Swiss-Prot
Match: Q0K956 (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=rlmD PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-04
Identity = 25/76 (32.89%), Postives = 37/76 (48.68%), Query Frame = 0 

Query: 54  VLRAREETVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNF 113
           V +A  E  Q GS         LPQ ++Y+SC   +   D  +L+    + L  A   N 
Sbjct: 373 VCKALGELAQQGSNV-------LPQRIVYVSCSPATLARDAGLLVHGAGYRLAGAGVVNM 432

Query: 114 FPGTQSIEVLAIFKRG 130
           FP T  +E +A+F+RG
Sbjct: 433 FPHTSHVESIAVFERG 441

[Close]
BLAST of Cucsat.G15461 vs. ExPASy Swiss-Prot
Match: Q0BEW2 (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) OX=339670 GN=rlmD PE=3 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 3.7e-04
Identity = 18/54 (33.33%), Postives = 31/54 (57.41%), Query Frame = 0 

Query: 76  LPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSIEVLAIFKRG 130
           LP+ ++Y+SC   +   D  +L+    + L+ A   N FP T  +E +A+F+RG
Sbjct: 412 LPKRIVYVSCNPSTLARDAGLLVHEAGYRLKGAGVVNMFPNTSHVESIALFERG 465

[Close]
BLAST of Cucsat.G15461 vs. ExPASy Swiss-Prot
Match: Q128S1 (23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) OX=296591 GN=rlmD PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.3e-04
Identity = 23/68 (33.82%), Postives = 35/68 (51.47%), Query Frame = 0 

Query: 69  DSEPNQSL-------PQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSIE 128
           D E  QSL       PQ ++Y+SC   +   D  +L+ + A+    A   N FP T  +E
Sbjct: 419 DGEQQQSLVLGDWTPPQRIVYVSCNPATLARDAGVLVESGAYRCTLAGVVNMFPHTAHVE 478

Query: 129 VLAIFKRG 130
            +A+F+RG
Sbjct: 479 SIAVFERG 486

[Close]
BLAST of Cucsat.G15461 vs. NCBI nr
Match: XP_011651563.1 (uncharacterized protein LOC101217214 [Cucumis sativus] >KGN58187.1 hypothetical protein Csa_017431 [Cucumis sativus])

HSP 1 Score: 291 bits (744), Expect = 6.74e-94
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE
Sbjct: 375 MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 434

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI
Sbjct: 435 TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 494

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKKRL 147
           EVLAIFKRGQGVPQKKKKVVKKKKKRL
Sbjct: 495 EVLAIFKRGQGVPQKKKKVVKKKKKRL 521

[Close]
BLAST of Cucsat.G15461 vs. NCBI nr
Match: XP_008450089.1 (PREDICTED: uncharacterized RNA methyltransferase pc1998 isoform X2 [Cucumis melo] >KAA0042886.1 putative RNA methyltransferase pc1998 isoform X2 [Cucumis melo var. makuwa] >TYK05289.1 putative RNA methyltransferase pc1998 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 283 bits (723), Expect = 9.70e-91
Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVK LSKSP LMDDKKDEKRPWVLRAREE
Sbjct: 375 MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKSLSKSPHLMDDKKDEKRPWVLRAREE 434

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGSTTD EPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI
Sbjct: 435 TVQIGSTTDLEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 494

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKKRL 147
           EVLAIFKRGQGVPQKKKKVVKKKKKRL
Sbjct: 495 EVLAIFKRGQGVPQKKKKVVKKKKKRL 521

[Close]
BLAST of Cucsat.G15461 vs. NCBI nr
Match: XP_016900814.1 (PREDICTED: uncharacterized RNA methyltransferase pc1998 isoform X1 [Cucumis melo])

HSP 1 Score: 283 bits (723), Expect = 1.11e-90
Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVK LSKSP LMDDKKDEKRPWVLRAREE
Sbjct: 380 MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKSLSKSPHLMDDKKDEKRPWVLRAREE 439

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGSTTD EPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI
Sbjct: 440 TVQIGSTTDLEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 499

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKKRL 147
           EVLAIFKRGQGVPQKKKKVVKKKKKRL
Sbjct: 500 EVLAIFKRGQGVPQKKKKVVKKKKKRL 526

[Close]
BLAST of Cucsat.G15461 vs. NCBI nr
Match: XP_038900099.1 (uncharacterized RNA methyltransferase pc1998 isoform X2 [Benincasa hispida])

HSP 1 Score: 259 bits (662), Expect = 1.22e-81
Identity = 136/147 (92.52%), Postives = 140/147 (95.24%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           +GSDVV+VDPPRKGLDA LA+MLRDISS KRKVK LSKSP LMD KKDEKRPWVLRAREE
Sbjct: 372 VGSDVVIVDPPRKGLDAPLADMLRDISSLKRKVKSLSKSPHLMD-KKDEKRPWVLRAREE 431

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGST D EPNQSLPQTLIYISCGWESFKEDCKMLLS+KAWHLEKAHGFNFFPGTQSI
Sbjct: 432 TVQIGST-DLEPNQSLPQTLIYISCGWESFKEDCKMLLSSKAWHLEKAHGFNFFPGTQSI 491

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKKRL 147
           EVLAIFKRGQGVPQKKKKVVKKKKKRL
Sbjct: 492 EVLAIFKRGQGVPQKKKKVVKKKKKRL 516

[Close]
BLAST of Cucsat.G15461 vs. NCBI nr
Match: XP_038900090.1 (uncharacterized RNA methyltransferase pc1998 isoform X1 [Benincasa hispida])

HSP 1 Score: 259 bits (662), Expect = 1.35e-81
Identity = 136/147 (92.52%), Postives = 140/147 (95.24%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           +GSDVV+VDPPRKGLDA LA+MLRDISS KRKVK LSKSP LMD KKDEKRPWVLRAREE
Sbjct: 376 VGSDVVIVDPPRKGLDAPLADMLRDISSLKRKVKSLSKSPHLMD-KKDEKRPWVLRAREE 435

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGST D EPNQSLPQTLIYISCGWESFKEDCKMLLS+KAWHLEKAHGFNFFPGTQSI
Sbjct: 436 TVQIGST-DLEPNQSLPQTLIYISCGWESFKEDCKMLLSSKAWHLEKAHGFNFFPGTQSI 495

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKKRL 147
           EVLAIFKRGQGVPQKKKKVVKKKKKRL
Sbjct: 496 EVLAIFKRGQGVPQKKKKVVKKKKKRL 520

[Close]
BLAST of Cucsat.G15461 vs. ExPASy TrEMBL
Match: A0A0A0LBW8 (MTS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G588460 PE=3 SV=1)

HSP 1 Score: 291 bits (744), Expect = 3.26e-94
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE
Sbjct: 375 MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 434

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI
Sbjct: 435 TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 494

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKKRL 147
           EVLAIFKRGQGVPQKKKKVVKKKKKRL
Sbjct: 495 EVLAIFKRGQGVPQKKKKVVKKKKKRL 521

[Close]
BLAST of Cucsat.G15461 vs. ExPASy TrEMBL
Match: A0A5A7TLM0 (Putative RNA methyltransferase pc1998 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001090 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 4.70e-91
Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVK LSKSP LMDDKKDEKRPWVLRAREE
Sbjct: 375 MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKSLSKSPHLMDDKKDEKRPWVLRAREE 434

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGSTTD EPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI
Sbjct: 435 TVQIGSTTDLEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 494

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKKRL 147
           EVLAIFKRGQGVPQKKKKVVKKKKKRL
Sbjct: 495 EVLAIFKRGQGVPQKKKKVVKKKKKRL 521

[Close]
BLAST of Cucsat.G15461 vs. ExPASy TrEMBL
Match: A0A1S3BNI0 (uncharacterized RNA methyltransferase pc1998 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491779 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 4.70e-91
Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVK LSKSP LMDDKKDEKRPWVLRAREE
Sbjct: 375 MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKSLSKSPHLMDDKKDEKRPWVLRAREE 434

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGSTTD EPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI
Sbjct: 435 TVQIGSTTDLEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 494

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKKRL 147
           EVLAIFKRGQGVPQKKKKVVKKKKKRL
Sbjct: 495 EVLAIFKRGQGVPQKKKKVVKKKKKRL 521

[Close]
BLAST of Cucsat.G15461 vs. ExPASy TrEMBL
Match: A0A1S4DXU9 (uncharacterized RNA methyltransferase pc1998 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491779 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 5.37e-91
Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVK LSKSP LMDDKKDEKRPWVLRAREE
Sbjct: 380 MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKSLSKSPHLMDDKKDEKRPWVLRAREE 439

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGSTTD EPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI
Sbjct: 440 TVQIGSTTDLEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 499

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKKRL 147
           EVLAIFKRGQGVPQKKKKVVKKKKKRL
Sbjct: 500 EVLAIFKRGQGVPQKKKKVVKKKKKRL 526

[Close]
BLAST of Cucsat.G15461 vs. ExPASy TrEMBL
Match: A0A6J1ERC2 (uncharacterized protein LOC111435166 OS=Cucurbita moschata OX=3662 GN=LOC111435166 PE=3 SV=1)

HSP 1 Score: 241 bits (616), Expect = 6.69e-75
Identity = 127/145 (87.59%), Postives = 133/145 (91.72%), Query Frame = 0 

Query: 1   MGSDVVVVDPPRKGLDASLANMLRDISSFKRKVKLLSKSPPLMDDKKDEKRPWVLRAREE 60
           +GSDVVVVDPPRKGLDASLA+ LRDI+S KRKVK LSKSP L D KKDEKRPWVLRA+EE
Sbjct: 372 VGSDVVVVDPPRKGLDASLADTLRDIASLKRKVKSLSKSPHLTD-KKDEKRPWVLRAKEE 431

Query: 61  TVQIGSTTDSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSI 120
           TVQIGST   EPN SLPQTLIYISCGWESFKEDCKMLLS+ AWHL KAHGFNFFPGTQSI
Sbjct: 432 TVQIGSTA-LEPNHSLPQTLIYISCGWESFKEDCKMLLSSNAWHLAKAHGFNFFPGTQSI 491

Query: 121 EVLAIFKRGQGVPQKKKKVVKKKKK 145
           EVLAIFKRGQGVPQKKKKV+KKKKK
Sbjct: 492 EVLAIFKRGQGVPQKKKKVLKKKKK 514

The following BLAST results are available for this feature:
BLAST of Cucsat.G15461 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6M9M72.9e-0947.27Uncharacterized RNA methyltransferase pc1998 OS=Protochlamydia amoebophila (stra... [more]
F2GA297.4e-0536.8423S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Alteromonas mediterranea ... [more]
Q0K9561.7e-0432.8923S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Cupriavidus necator (stra... [more]
Q0BEW23.7e-0433.3323S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Burkholderia ambifaria (s... [more]
Q128S16.3e-0433.8223S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Polaromonas sp. (strain J... [more]
BLAST of Cucsat.G15461 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651563.16.74e-94100.00uncharacterized protein LOC101217214 [Cucumis sativus] >KGN58187.1 hypothetical ... [more]
XP_008450089.19.70e-9197.96PREDICTED: uncharacterized RNA methyltransferase pc1998 isoform X2 [Cucumis melo... [more]
XP_016900814.11.11e-9097.96PREDICTED: uncharacterized RNA methyltransferase pc1998 isoform X1 [Cucumis melo... [more]
XP_038900099.11.22e-8192.52uncharacterized RNA methyltransferase pc1998 isoform X2 [Benincasa hispida][more]
XP_038900090.11.35e-8192.52uncharacterized RNA methyltransferase pc1998 isoform X1 [Benincasa hispida][more]
BLAST of Cucsat.G15461 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBW83.26e-94100.00MTS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G588460 PE=3 SV... [more]
A0A5A7TLM04.70e-9197.96Putative RNA methyltransferase pc1998 isoform X2 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3BNI04.70e-9197.96uncharacterized RNA methyltransferase pc1998 isoform X2 OS=Cucumis melo OX=3656 ... [more]
A0A1S4DXU95.37e-9197.96uncharacterized RNA methyltransferase pc1998 isoform X1 OS=Cucumis melo OX=3656 ... [more]
A0A6J1ERC26.69e-7587.59uncharacterized protein LOC111435166 OS=Cucurbita moschata OX=3662 GN=LOC1114351... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 19..86
e-value: 2.1E-10
score: 42.3
NoneNo IPR availablePANTHERPTHR47548BNAA06G32370D PROTEINcoord: 3..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G15461.T1Cucsat.G15461.T1mRNA
Cucsat.G15461.T8Cucsat.G15461.T8mRNA
Cucsat.G15461.T2Cucsat.G15461.T2mRNA
Cucsat.G15461.T10Cucsat.G15461.T10mRNA
Cucsat.G15461.T19Cucsat.G15461.T19mRNA
Cucsat.G15461.T7Cucsat.G15461.T7mRNA
Cucsat.G15461.T6Cucsat.G15461.T6mRNA
Cucsat.G15461.T9Cucsat.G15461.T9mRNA
Cucsat.G15461.T27Cucsat.G15461.T27mRNA
Cucsat.G15461.T24Cucsat.G15461.T24mRNA
Cucsat.G15461.T18Cucsat.G15461.T18mRNA
Cucsat.G15461.T23Cucsat.G15461.T23mRNA
Cucsat.G15461.T16Cucsat.G15461.T16mRNA
Cucsat.G15461.T11Cucsat.G15461.T11mRNA
Cucsat.G15461.T3Cucsat.G15461.T3mRNA
Cucsat.G15461.T20Cucsat.G15461.T20mRNA
Cucsat.G15461.T21Cucsat.G15461.T21mRNA
Cucsat.G15461.T22Cucsat.G15461.T22mRNA
Cucsat.G15461.T15Cucsat.G15461.T15mRNA
Cucsat.G15461.T4Cucsat.G15461.T4mRNA
Cucsat.G15461.T14Cucsat.G15461.T14mRNA
Cucsat.G15461.T17Cucsat.G15461.T17mRNA
Cucsat.G15461.T12Cucsat.G15461.T12mRNA
Cucsat.G15461.T5Cucsat.G15461.T5mRNA
Cucsat.G15461.T25Cucsat.G15461.T25mRNA
Cucsat.G15461.T26Cucsat.G15461.T26mRNA
Cucsat.G15461.T13Cucsat.G15461.T13mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008168 methyltransferase activity