Cucsat.G1491.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G1491.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ABC transporter G family member 23
Location	ctg1000: 248902 .. 252667 (-)
RNA-Seq Expression	Cucsat.G1491.T5
Synteny	Cucsat.G1491.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATCGTATTCCATATAATACCTCTAAACGATCGTATATAAAAAAATATTGAAAAAAAATGATCGTATAGAGAAAGAATAACCTTGTTTTCCAAATATCATCCATTTCAAATTCTTTTTAAATATTTTGTAGGTTTTGTTGTATTTTTTAAAAAATCCCTTAGAAAATAAAATAAAATAAAGTGTAAGGGCTAAAAAGTGATTTCCAAGAAATAAATTTATACGACCGAATGAAGGGAAAGAAAATCCCCTTTGGCGGTGAAGATAATGTACGCAACAAAGTTTGAATATAAAAAAGATAAATAAGTAAAAACGAGCCCTAGATTTTGTATAAAAGGGGACTTGCAATTCACAACTTGTAAATTTTCTCCTCAAGAACTCTTAGATCGTGAGTAGAGAATATTCTCGAGCATCGTTTCTTTTCTTCTGGTTCAGAATAATTCCCTTCAGCATCTCTGTTCATTTCAAACTTTTGATTGATTTTGTGCTGAACAACAAACTATTTGGGGTTCTTGTGTAATTTAAGAAGAGCGAGGAAGATCGGAAGGACAAACCCCTCGTGTACTCGCTATGTCTTCTTCCGGAATCTCTTCCCAAAGCTCCGAATTGACAGATGCGGTTCAAGGACTAGTTCTTTGCGATCAGGTTTTATTATTTATCTATTCATTTTCGAAGTTGATGTACTTTTACGCGCTTTCTTTATTCAAGAGAATCTTGGGGGTGTGTGAGAAATGGTTGTTTTCGATTTGTGTTGAGAGTTCTTATTGATTTAGTCTTGGTGTCATTTGCTTTTCAAGATTTGCGTTTCTTGGGGGCTAATTAAATAAGTCAGAGATTGTTGGGTTAGTCTTGTTTTTTTCATCATCGAGATTATGGACGTCGGGGTGATTGTTTTCTGCGTTTGGATATCTAGGGGGAATATGGTTCAATCGAATTGAATTGATTTTTGTGGTTGGTTGTATGGGTTTGGGGAATCATAATAATCAGAAGCTATTGTTTGTGTTCACCCGTTTGTCAGTAATGGTTGTTTTTCTTTCGCGAAATTGGTTGGTCGCCTGGGAATGAATTTCTTTATTCTTTAAAGAAGATAGTTCTTTCCTCTCTTTGAGTTCGAGTTGCATAGCCATGATTTTGTCTAAGTGTCTGTTTTCTAATTTGCTGGACTTGTATGTTTAGTTGGAAATGTAGATCTTTCTTGCTTTTGGTTCAGAAGAATTCTTTAGTCTCTCTCTCTCTTTTTTATAAGTTTTGATTTGTGCTGAACAACTATTTGGGTTCTGTGTTTTTTAGAGCGATAAAGATCGGAGGGCTATGGCAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCTGTTCAAGAACAAGTAACTTGCGACCAGGTTTTATCTATCTATTCATTTTCGAAGTCGATCTACTTTCGCGCACTTTCTTTTTCCTAGAGAATCAAGGGCGTAAAACTCTGCTAGGAAATGGTTGTCTACAATTTGTTTTGATAGTTCTTATTGGAAATATAGTGTTCTCAAATCTGAAATCGTTAATCTAGTTTTGTTGCCCTTTGTTTTTCAAGATCTGTAACCGTTGGGCTAATCTTGTTTCTTTCATTGTCAAGATTACGGATATCAGGCCCTGCGATATAATATCTAGGGAGAATATGGTTTATTTGAATTGAATTTGAGATTGGTTGTATGGCTAGATACTATTGCTTATGTTCATCTTGTTTTTCTCTTGCGTGTGCTTGTTTTTCTTTATTCTATCAGGAAGATTTCCTCTCCTTCAGTTAGAGCTGCATATCTATGATTCTGTTTGATTGCTTGTTTTCGAATATTGAATATTCACTCCATACTTCAAGGATCTCTTATTTGGTGGATTTGTATGTTTAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATCTGCTTAAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGGTTTGTTCCTATCGATTCATCTTTCATCTACTTATTAATATTTTCTATGGCATGACTTATTCATTTCGTTGTCGCTCTATGCTTGTATTGGAGATGGAGTTTTAAGTTGTTGCGAACGTATTCCTGGGAGTCCGCTAAACTTTGTAGGAGAAAATTCACTGTATCCATATTGCCTTTGGTGCAATGTTTCTAATTGTACTTGAGGTTGCTCGGATTTAATTGGAAGAGGTATGCTGTTTTAGATTTATAACCAAAACATCTCGGAGTTATGGAGTCGATAGATAATTTGTTATTTAAAAGATACATCATGAACTAGCCGAAGTCTTGTCTTATATAGTTTATTGATCGTTGAACTTAAAATGCTTGCTTTGTGGCATTTGGACCAAATTAGTTTGGATAAGGTGTTTGTATTCTGCATATGTTAGATTGGCAACTGCTGTTTAAATTATTATGACATGTTGGACACGCTTGTTGAACTTGACACATCAAACACCGTGTTGAATATTTGATGGGTACAAAGTACAATAGACACAGAATGAAGCACATATTGATGTTGCATTTTGGATTTTTGAACACATGTTGGAACAATTATTAGCCATTTGGATATGGATGTTTGAAAAATGGCATGTCAGCCTTTTTGGGAAGCGAGCTACCCTTTCAACTCCTCCAAATTATGTATTTACATGCTTGGATGCATTTTATTTTCTTTATTCTTTCTTTTACTTTCATGAAGTGCAACTTGCATCCTTCGATGGGCATCATACACTAAGAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCTTGATCGTTCATCGTTCTCTTGATGGGAGGTTCGTCCATTCATCATTCTATGGAGATATTTTATAGATTATAGTTTAGATTTGTGAACCCTGTTATCTTTTTAAATTACTGTTCTTATTATATATTTCCTTTGCATTGTTAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCCAATCATTGAAGAACGGGAGGAAACATATGATGATCCTGAGGATGACCAATACTATCCTTATGAGGATGATGATGAAGAGTTAGAGGATGCTTACTTGGGTGAATCACCATCTCTTCGCATTGGGAATCGAAGGTGGGGATACAATGGTTATGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGACCTAGTTCATCGAGGGAGCCCGTAACAAAACAGGCTTCTTCCAAGGACAAAACAGGCCGACGTGCTAAAAGGGCCTTGAAACGAGAAGCTGCAGATAAAGCAGCAGCAGCCAAGCATCAAGAGCATCTGGCTAGGTTTGGCCGGAAGTGATTTTTATGTTTAAAACTCCTGTATAGAACTAAGCTCTGCTCTTTTCTATCTGTACAGCTCTTTGATTCAATCTTCTTTCCTAGCTGATGCACCTTACTAAAGGCTGGTAGCTCCCAATGAAAAACTAAGATAGAGATCATAAATGCTGATAAGGTTGTACATGAGGCCAGCGAATTCTTTGTATAAAATTTGTCTTTTCAGGTGAACAACTGAAGATGGCCTACATGGGTTTGGGTTCGGGTTGAGTTGGTGATCGATTTGTTTTTGCTTTTGTTTTTAATTTTATTTTGAGTAATTTTCTAATGTTAAAAAATTGTGAAATCAAATAGGAAAGAAAGCTCTCCTTCAAGGTCCAACACTGCAATTACAAGGGA

Coding sequence (CDS)

ATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCCAATCATTGAAGAACGGGAGGAAACATATGATGATCCTGAGGATGACCAATACTATCCTTATGAGGATGATGATGAAGAGTTAGAGGATGCTTACTTGGGTGAATCACCATCTCTTCGCATTGGGAATCGAAGGTGGGGATACAATGGTTATGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGACCTAGTTCATCGAGGGAGCCCGTAACAAAACAGGCTTCTTCCAAGGACAAAACAGGCCGACGTGCTAAAAGGGCCTTGAAACGAGAAGCTGCAGATAAAGCAGCAGCAGCCAAGCATCAAGAGCATCTGGCTAGGTTTGGCCGGAAGTGA

Protein sequence

MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

Homology

[Close]

BLAST of Cucsat.G1491.T5 vs. NCBI nr
Match: XP_011657615.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus])

HSP 1 Score: 265 bits (676), Expect = 1.79e-87
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN
Sbjct: 110 MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 169

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA 120
           RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA
Sbjct: 170 RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA 229

Query: 121 AAAKHQEHLARFGRK 135
           AAAKHQEHLARFGRK
Sbjct: 230 AAAKHQEHLARFGRK 244

[Close]

BLAST of Cucsat.G1491.T5 vs. NCBI nr
Match: XP_004140197.1 (uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus] >KGN48101.1 hypothetical protein Csa_003121 [Cucumis sativus])

HSP 1 Score: 265 bits (676), Expect = 5.13e-87
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN
Sbjct: 142 MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 201

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA 120
           RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA
Sbjct: 202 RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA 261

Query: 121 AAAKHQEHLARFGRK 135
           AAAKHQEHLARFGRK
Sbjct: 262 AAAKHQEHLARFGRK 276

[Close]

BLAST of Cucsat.G1491.T5 vs. NCBI nr
Match: TYJ96112.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 243 bits (619), Expect = 2.34e-78
Identity = 129/136 (94.85%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWYKP I EEREETYD+PEDDQYY YEDDDEELEDAYLGESPSLRIGN
Sbjct: 142 MFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGN 201

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTG-PSSSREPVTKQASSKDKTGRRAKRALKREAADK 120
           RRWGYNGYVRAGRQEARPVLRQEFTG PSSSR+PVTKQAS KDKTGRRAKRALKREAADK
Sbjct: 202 RRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQAS-KDKTGRRAKRALKREAADK 261

Query: 121 AAAAKHQEHLARFGRK 135
           AAAAKHQEHLARFGRK
Sbjct: 262 AAAAKHQEHLARFGRK 276

[Close]

BLAST of Cucsat.G1491.T5 vs. NCBI nr
Match: XP_016900768.1 (PREDICTED: uncharacterized protein LOC103491476 [Cucumis melo])

HSP 1 Score: 233 bits (594), Expect = 1.65e-74
Identity = 124/131 (94.66%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWYKP I EEREETYD+PEDDQYY YEDDDEELEDAYLGESPSLRIGN
Sbjct: 142 MFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGN 201

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTG-PSSSREPVTKQASSKDKTGRRAKRALKREAADK 120
           RRWGYNGYVRAGRQEARPVLRQEFTG PSSSR+PVTKQAS KDKTGRRAKRALKREAADK
Sbjct: 202 RRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQAS-KDKTGRRAKRALKREAADK 261

Query: 121 AAAAKHQEHLA 130
           AAAAKHQEHLA
Sbjct: 262 AAAAKHQEHLA 271

[Close]

BLAST of Cucsat.G1491.T5 vs. NCBI nr
Match: XP_038901113.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Benincasa hispida])

HSP 1 Score: 228 bits (580), Expect = 4.66e-73
Identity = 118/135 (87.41%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWYKP I+EEREETYDDPEDD+YYPYEDDDEELEDAYLG SP+LRIGN
Sbjct: 102 MFEESVCLLLRASWYKPQIVEEREETYDDPEDDRYYPYEDDDEELEDAYLGVSPNLRIGN 161

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA 120
           RRWG+NGYVRAGRQEARPVLR +   PSSSREP      SKDKTGRRAKRALKREAADKA
Sbjct: 162 RRWGFNGYVRAGRQEARPVLRPQLAEPSSSREPT-----SKDKTGRRAKRALKREAADKA 221

Query: 121 AAAKHQEHLARFGRK 135
           AAAKHQEHLARFGRK
Sbjct: 222 AAAKHQEHLARFGRK 231

[Close]

BLAST of Cucsat.G1491.T5 vs. ExPASy TrEMBL
Match: A0A0A0KK15 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 PE=4 SV=1)

HSP 1 Score: 265 bits (676), Expect = 2.48e-87
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN
Sbjct: 142 MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 201

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA 120
           RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA
Sbjct: 202 RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA 261

Query: 121 AAAKHQEHLARFGRK 135
           AAAKHQEHLARFGRK
Sbjct: 262 AAAKHQEHLARFGRK 276

[Close]

BLAST of Cucsat.G1491.T5 vs. ExPASy TrEMBL
Match: A0A5D3B8D7 (E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00750 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 1.13e-78
Identity = 129/136 (94.85%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWYKP I EEREETYD+PEDDQYY YEDDDEELEDAYLGESPSLRIGN
Sbjct: 142 MFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGN 201

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTG-PSSSREPVTKQASSKDKTGRRAKRALKREAADK 120
           RRWGYNGYVRAGRQEARPVLRQEFTG PSSSR+PVTKQAS KDKTGRRAKRALKREAADK
Sbjct: 202 RRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQAS-KDKTGRRAKRALKREAADK 261

Query: 121 AAAAKHQEHLARFGRK 135
           AAAAKHQEHLARFGRK
Sbjct: 262 AAAAKHQEHLARFGRK 276

[Close]

BLAST of Cucsat.G1491.T5 vs. ExPASy TrEMBL
Match: A0A1S4DXR5 (uncharacterized protein LOC103491476 OS=Cucumis melo OX=3656 GN=LOC103491476 PE=4 SV=1)

HSP 1 Score: 233 bits (594), Expect = 8.01e-75
Identity = 124/131 (94.66%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWYKP I EEREETYD+PEDDQYY YEDDDEELEDAYLGESPSLRIGN
Sbjct: 142 MFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGN 201

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTG-PSSSREPVTKQASSKDKTGRRAKRALKREAADK 120
           RRWGYNGYVRAGRQEARPVLRQEFTG PSSSR+PVTKQAS KDKTGRRAKRALKREAADK
Sbjct: 202 RRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQAS-KDKTGRRAKRALKREAADK 261

Query: 121 AAAAKHQEHLA 130
           AAAAKHQEHLA
Sbjct: 262 AAAAKHQEHLA 271

[Close]

BLAST of Cucsat.G1491.T5 vs. ExPASy TrEMBL
Match: A0A5A7V3C1 (E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001490 PE=4 SV=1)

HSP 1 Score: 226 bits (576), Expect = 6.84e-72
Identity = 123/131 (93.89%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWYKP I EEREETYDDPEDDQYY   DDDEELEDAYLGESPSLRIGN
Sbjct: 142 MFEESVCLLLRASWYKPLIFEEREETYDDPEDDQYY--HDDDEELEDAYLGESPSLRIGN 201

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTG-PSSSREPVTKQASSKDKTGRRAKRALKREAADK 120
           RRWGYNGYVRAGRQEARPVLRQEFTG PSSSR+PVTKQAS KDKTGRRAKRALKREAADK
Sbjct: 202 RRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQAS-KDKTGRRAKRALKREAADK 261

Query: 121 AAAAKHQEHLA 130
           AAAAKHQEHLA
Sbjct: 262 AAAAKHQEHLA 269

[Close]

BLAST of Cucsat.G1491.T5 vs. ExPASy TrEMBL
Match: A0A6J1JFP2 (uncharacterized protein LOC111484597 OS=Cucurbita maxima OX=3661 GN=LOC111484597 PE=4 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.29e-69
Identity = 115/133 (86.47%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGN 60
           MFEESVCLLLRASWY+P I+++REETYDDPE  +YYPYED DEELE+AYLG+SPSLRIGN
Sbjct: 108 MFEESVCLLLRASWYEPLIVKDREETYDDPE--EYYPYEDQDEELEEAYLGDSPSLRIGN 167

Query: 61  RRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKA 120
           RRWG NGYVRAGRQEARPVLR EF+G SSSREP TK AS KDKTGRRAKRALKREAADKA
Sbjct: 168 RRWGDNGYVRAGRQEARPVLRPEFSGASSSREPTTKDAS-KDKTGRRAKRALKREAADKA 227

Query: 121 AAAKHQEHLARFG 133
           AAAKHQEHLARFG
Sbjct: 228 AAAKHQEHLARFG 237

[Close]

BLAST of Cucsat.G1491.T5 vs. TAIR 10
Match: AT5G19430.1 (RING/U-box superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 4.8e-30
Identity = 83/148 (56.08%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKP-PIIEEREETYDDPED-DQYYPYEDDDEELEDAYLGESPSLRI 60
           +FEESVCLLLRASW+ P  ++E+   ++   +D D  Y YED+D++L++ YL  S SLRI
Sbjct: 109 LFEESVCLLLRASWFVPLDVVEQASYSHGYHDDFDIPYDYEDEDDDLDEFYLHGS-SLRI 168

Query: 61  GNRRWGYNGYVRAGRQEARPVLRQEFTGP-------SSSREPVTKQASSKDKTGRRAKRA 120
           GNRRWG NG+VR+GRQEARPV R   +G        SSS EP  KQ  + + TGRRAKRA
Sbjct: 169 GNRRWGGNGFVRSGRQEARPVQRYSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRA 228

Query: 121 LKREAADKA----AAAKHQEHLARFGRK 136
           +KREAA+KA    AAAKH+ HL R GRK
Sbjct: 229 MKREAANKAAEVTAAAKHEAHLVRLGRK 255

[Close]

BLAST of Cucsat.G1491.T5 vs. TAIR 10
Match: AT5G19430.2 (RING/U-box superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 4.8e-30
Identity = 83/148 (56.08%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKP-PIIEEREETYDDPED-DQYYPYEDDDEELEDAYLGESPSLRI 60
           +FEESVCLLLRASW+ P  ++E+   ++   +D D  Y YED+D++L++ YL  S SLRI
Sbjct: 94  LFEESVCLLLRASWFVPLDVVEQASYSHGYHDDFDIPYDYEDEDDDLDEFYLHGS-SLRI 153

Query: 61  GNRRWGYNGYVRAGRQEARPVLRQEFTGP-------SSSREPVTKQASSKDKTGRRAKRA 120
           GNRRWG NG+VR+GRQEARPV R   +G        SSS EP  KQ  + + TGRRAKRA
Sbjct: 154 GNRRWGGNGFVRSGRQEARPVQRYSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRA 213

Query: 121 LKREAADKA----AAAKHQEHLARFGRK 136
           +KREAA+KA    AAAKH+ HL R GRK
Sbjct: 214 MKREAANKAAEVTAAAKHEAHLVRLGRK 240

[Close]

BLAST of Cucsat.G1491.T5 vs. TAIR 10
Match: AT5G12310.1 (RING/U-box superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 77/150 (51.33%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 1   MFEESVCLLLRASWYKPPIIEEREE-----TYDDPEDDQYYPYEDDDEELEDAYLGESPS 60
           MFEESVCLLLRASW++P    ER        YD     +Y   ++DD++L++ Y+ +  S
Sbjct: 106 MFEESVCLLLRASWFQPLEAVERVSDNDNFNYDFDIPPEYEEEDEDDDDLDEFYM-QGSS 165

Query: 61  LRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVT------KQASSKDKTGRRAK 120
           LR+GNRRWG NG+VRAGRQEARPV  +   G +S  EP +      K+ +S   TGRRAK
Sbjct: 166 LRLGNRRWGDNGFVRAGRQEARPVQHKNRGGQASGSEPASSSSCEPKEKTSSAITGRRAK 225

Query: 121 RALKREAADKA----AAAKHQEHLARFGRK 136
           RA+KREAA+KA    AAAKH+  L R GRK
Sbjct: 226 RAMKREAANKAAEAVAAAKHEALLVRLGRK 254

The following BLAST results are available for this feature:

BLAST of Cucsat.G1491.T5 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G1491.T5 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657615.1	1.79e-87	100.00	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus]	[more]
XP_004140197.1	5.13e-87	100.00	uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus] >KGN48101.1 hy...	[more]
TYJ96112.1	2.34e-78	94.85	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_016900768.1	1.65e-74	94.66	PREDICTED: uncharacterized protein LOC103491476 [Cucumis melo]	[more]
XP_038901113.1	4.66e-73	87.41	E3 ubiquitin-protein ligase RNF13 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G1491.T5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK15	2.48e-87	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 P...	[more]
A0A5D3B8D7	1.13e-78	94.85	E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S4DXR5	8.01e-75	94.66	uncharacterized protein LOC103491476 OS=Cucumis melo OX=3656 GN=LOC103491476 PE=...	[more]
A0A5A7V3C1	6.84e-72	93.89	E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1JFP2	1.29e-69	86.47	uncharacterized protein LOC111484597 OS=Cucurbita maxima OX=3661 GN=LOC111484597...	[more]

BLAST of Cucsat.G1491.T5 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19430.1	4.8e-30	56.08	RING/U-box superfamily protein	[more]
AT5G19430.2	4.8e-30	56.08	RING/U-box superfamily protein	[more]
AT5G12310.1	1.9e-26	51.33	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44
None	No IPR available	PANTHER	PTHR47361	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..135

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G1491	Cucsat.G1491	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G1491.T5.E1	Cucsat.G1491.T5.E1	exon
Cucsat.G1491.T5.E2	Cucsat.G1491.T5.E2	exon
Cucsat.G1491.T5.E3	Cucsat.G1491.T5.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G1491.T5.C1	Cucsat.G1491.T5.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G1491.T5	Cucsat.G1491.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding