Cucsat.G13681.T35 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G13681.T35
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionthylakoid membrane protein TERC, chloroplastic
Locationctg184: 863079 .. 868661 (-)
RNA-Seq ExpressionCucsat.G13681.T35
SyntenyCucsat.G13681.T35
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAAACGAAGCTCCAAAGAACAAAAAAAGAAAATTATGGATAAGATATAGTGAGTCCTCAGTCTCCGCTATTCGAAGCGGTGGAAATGGCTTCAATCATCCACAACGGCCTTCAAATTTCTTCGAAGCTCGATTCTCCATGGCCTAAGGTTTCATCACATCTTCATTTTCATCCTCGAGCATGGGTTGAGGCTGTCCACAATCACGTTCCTCAATTTTCCCCAGGTTCAACTCTTCCCTTTTCTCTCCACTGTGAAGATCGGCGTAATCTGATTGAGTAATGTATGCATTCGTATTCGTAGTTATCCTCAATTGCCGTCCTTCTCCGCGCTCTTTGGTTCGATGCTCCAGTCGAATCGAGAGGGAAGGCGATCCGTCTACTGCAGGTCAGTGAGTGTTTCCGCGAGATTTTTCTTCTTCAAGTTTAATGGTGATATTCGTACATGTCTGTTTCAATTAGAGGTGGATAATAGCGAGGCATTTTTCAATTGTGGTTACTTGTTCATCATATGGTAACAGTGAGACGAATTTGCAGAAGCCAATAGGACGTCTTCCGTCCGAGGAACGATTGAGGGGTCTGAAAGTAAAGTTTCTTCTATTAGAAATGTTGCTCTATGTGTAAGCACTTGCTGGGCTTTAATTTTTTAATGTAATCAAACAGTATGGCTGTTCGTTGTTAATTGTTTTGCTACTGTTTATTCTCTGTTCTAGGTTGCTACTGCCGTGGCATTTGGTATTGGGGTGGGTTTGAAAGATGGAGTTGGCAAGGCATCTGAATTTTTTGCCGGGTATGTTACATACTACTTTTTACAATCGTCTCTCCAGTAAACAGACGATTTCTTCGGTTGTCTGTCATTTTCCTTTAGCAAGCTGATTGATAGGATGACAAATGGGATTGACCCTAATCAAATACGATTTATAAATTCATTGGTAATTGGGGAATAAAAAATGTCGTATAGGGAAGCATTATGCAGAATGCGACTTGCACTGCAGTCCCATACTGTTTTGGTTACATTGGTTCTTGGATTTGTGGCTTATGCTTAGCTTTTAAGGTGAACTGTGCATATTATCTAGGACAAGAGCGCATGTGCACATTTCATATTGGTACAAGTACAAGCTTAGTTTTGAACTTTGTAGTCTGTAACATTAATGTAGAGATTTGGAAGATCCAAACATACCTTACCTTGTATTGTAGAACTCCTCACTTTATTTTACTTCTTTATGCTCTGTCAATGTCTGATTTTATGACAATTTTCAGGTATCTTCTGGAGCAAAGTTTGTCAGTTGACAATCTCTTTGTCTTTGTTTTGATTTTCAAATACTTTAAAGTGCCAACGGAGTATCAGGTGCTAAGTTTGTCCAAAGCTATGACTAAATTGCTAGTTAGCATGCAAACTATTGCAATTACTTTGCTTTCCTGAATAATTTAACGTCTATGCATGTTGATGATTTTTTGGTTTTGAAATATAGAATCGGGTGCTTACTTATGGTATTTCTGGTGCAATTGTCTTTCGTCTAACAATCATACTTCTGGGAGCAGCCACTCTGCAGGTAACTTCTCTTCCTGTTGTATTCCAGTTTGCTCATATAGTCTATCTGAGAATTGTATCTACTATTTCAGAGATTTGAGGCTGTGAACCTGCTTCTGGCTGCTATACTTCTATTCTCATCATTTCAGGTTTTTGTTCTAAGCTTTTTACTTTTAAATTTCCATATGTTTTCTGATGATCAATTATTAGGACCTTTTAGCTTAAATGTATCATGAATTCTGCAGCTGTTTGCGAGCAATGAAGAGGATGACGGCGATCTATCAGACAACTTTGTAGTAAAGACGTGCCAACAATTAATTCCTGTTACAGGTATTTTGAAATTAGAGTATATTTGTTTTTGTGCTGGAGTATGTACTCGTGATAAGTGCTTGATCATTTATTCTATTTTCTTAACACATTTATTAGTTCAGAGGAAGTAAAGTAGACTCCTTTGCAACTTTTGTATATTTGCTACATGAAAAATGGTGAACCTCATTACTATGATGATCAACTTTCCTTAAATCACAGTCCATATTTGCTTAGGTAACTCATGAAGAAATTATTAAGAGGATTTATCAAAAAATAAACGGGAAAAGAATATTTTCATGCAATATAATTGAAATGTTTTTTAGTTATACGAGGAAAACACTAAATAGTGTATGAAAGTGTTACTTTTCCAGTCTGTTTGGTCGGCTTACTCTCAAATGGGACATTTGTATCTCTCTCCCTCTCTCTCTCTTTTAATGGTTATTTTTTTCTCTTTTTATGCTCATGGTTTAGATATTACTTTCCCTGTTATATTGTTGCAGCAACCTATGATGGGGATCGCTTTTTTACACTTCAGGAGGGTGTGAAGAAAGTAAGTTATGATAGACTCTACTGTAGCTTTAGGAATACCATTGATGACCTTTCCTCATGTTGAGCATGAAATAAGAGAAGATTCTTTTCGAGAAGCATGTCACATTGTTCTATTGGAAGCTTATAAATCTGTCATGTAAACTTAAATTTGACATGATTTCTAACAGGTCTCGAACATTTTGGACAGGCAACACCTTTACTGCTCACCATAGCTGTTATTGAGCTCAGTGATATAGCATTTGCAGTACGTTTTGCACGACTCAATTATGTTATATATGCATCAGGATGTTATTTACTTCACCTTTTTAGTTTATGGAAATGCTCATTCAACCTTTATTTTCTTGAACATGGTGCTAGGTTGATTCAATACCTGCCGTTTTTGGTGTTACAAGGGACCCTTTCATAGTAATTACGTCAAATTTTTTTGCCATTTTAGGTAACATACCCTTCTTCGAATTAACCTCTTGGATAAATGGATCCTAACAACATTGACATTGATTTTCTTCTTCTTTTCTTTACATCACTTCAATCATGAAGTAATTTGCCAACATTTGTTTCATCTAATGACTCACTCAAATATTAAATATGGGAACATTAGTGGCTAATGGGTTCAAGAGTTTTCGTAGTAGTTAAATAGAAAAGTTCTATCTTTTTCTTTTCTTGAAAAGGAAACATTAAATCAAAAGATCTATCGTGGAAGATGTGTCAGGATACTGTATTTATTGTTCATTTGTTTCCTTTAACAAGTTGAGAACTTTGGTATGTATCCAGTTGTTCATTAAATTTTTTGGAGATGCATAATGACCACCATTTTTGTGTGCTACAGGTTTGCGGTCCCTATTCATTCTTGTAGCTGATGGGATGTCAGAATTGGAGTACTTACAGGTAAAATTTTAGACGTAAAAAATGAAGAGCATGTCAAGTTCTATCATTCTTGTATCTCACTTTTCTCTTACCTGGTGGATGCTATAGTAAATGTTATTAATATTATTTTGTAGTCCTCAATTAGGTATAATCAACATTATTTCAAAATCTCATTTGTTACAATATTTTCTATTTCCTAGAGTTTTTACTATTTTTACATTCATCATTTTTTTTATTCTTTGCTACAATTTTTCTTATTTTACGTTCATAATTTTTTATTCTTTGCTCCAATATTCGCTATTTACTTTACAAATTAAAATAGTTTACACTTCAAACAAATACTATTTTAAATCAAACCAAAATAATCTATACCCCAAACATAAACTATTATTACCCAATTGTATTAACATATAACTATAATAACTAACTCCTGCTCCAAATGTCCCTTGAAAGTCTTAAAGCACGTCCACTTTAGGACTCGGTTGATTTAAATAAAATGGTGAAATTGAAAACTCAATTAAAAAATATTTTTGGTGATCATATAATTGTGGACAAATACTATGGCCGTACTGTGCAAGCCTTTTTGGTGTTTTCCAAGTCTTACAAATGGCTCAGTTATTGCTCTCCTATAAACGTGCACTGAAGGAAATTTTCTCCATATTTTCAATGTCCTTCCAGCCTTCCATTGGCGTTGTTCTAGCATTTATTGGGAGCAAGATGATCCTTGATTTCTTCGGTGAGCATGCTTTTGTCCATTTGAAATGTCAAATCTGTTATGACACCTATATACATTTTAAAATTCCAGTATTCATTGACCTCACTCTTCATGCAGGATTCCACGTTCCAACTGAGGCATCTCTTGGATTTGTCGCAATAAGTCTGAGCACTGGTGTTCTCTTGAGTCTATTGAAGAAGGCTGATTGATCAGAAAAACAGAAAGAGAGGGTGTTCGGCTTTAATCGAAGTAAGTTATTGCTTCTTCATTTTGGTAAAAAAGAAAAGGCCTATCAAGCTTCTAATTGAAAAATTAACAACTTAAGTGTACCGTTTCAAGCTTCTAAATAAAAAATTTAGGCTGTTTGGTAACCATTTTACTTTTAGTTTTTGAAAAGTAATCCTGTAGACACCCCTTAAATTTTTTGTTTTCTTATCTATTTTTTATCAATGTTTTAAAAAACCAAAGCCAAAATTTGAAAACTATGGCTTGTTTGGTAACCATTTCATTTTTCATTTTTTAAAAATTAAGCCTATATTTCCCCATTTTCTTGTACTCTTTTTCGTAAGTACAAGAGTGGAATTATTAGCCAAATCTAAAAACAAAGATAAACTTTTAAAAAATGGTTTACTTAATTTTCAATAGTCTGGTTTTTAAAAACATAGGTTGGAAGTACATAATGAAACAAGAAACTTAGAGGTGGAGGTGGAAGGAAAGGAGTGTCTGTAAGCTTAAAACTAAAAACCAAAAATCAAGGGTACAAAACGGGGCCTATAAAATTAGTTGAAACGTTTTTCTTTTCTTGAATTTGGTGTATTTAACTCTTATATTCAAGTCTAAAGATATGAGGAAGGGAGGCATAGAAATTATATGCAAATCATAGTAAGAACACTTGAGGAAACAGGGTTAACTCTTCAAAACTCAACCGCTCTTGAATGTGAATTGGTAGAGTAGGGAGGCATAGAAATTAGAGAGTGAAGCTTCTGATTCTGTCATTGTCAAAATGTTGGACGAAAAATAAACTAGAATAAAATTTAGAGCAAGTGTCCATAACTAAATTATTAAAGGTTAGTTTAGCTCAACAGTAATTGACATGACTCACCAACCTGGAGGTATAAAGTTCGATCTCTCATCTTAAGTTGTTATACTAAAAAAACTAACATTCTTTCTATTACTAAATGTTAGGATTTCCTACTTTCTAATCGTTATTTTTCATGATTGCCAGAATTGTTTGTTTAAAATTGTCATTTCACTATTGACTGGAGCCACGGTTATACTTGGGAAGAAAAAGATGATAGAGCCGTTCTGCTATCTACGAATCATGGAGGTTAGAAGAACCATTCTTTTAAGAACTCGTTGGTGGTTGTGCTGAGATGATGAATTTATTCTCCTTGTTCTTTTCTAGTAATTCCAAATCTCTCTCTCAGAACCTTTCTGTTGTAGATAAATGATTAGTAGCTCTAAATCTCTGCTTTTCACCGTTACATTCTTATGTCAAAGGTGAGTTATTGTCGTCCCTTTCTGCTACCCCCACCCCACTCCTCCCCCCAAAAAATATGTACAATAATTATTATAGTAATGAATGTAAAATATACTTTTAGTTCTTGGGATTGGGAT

Coding sequence (CDS)

ATGTATGCATTCGTATTCGTAGTTATCCTCAATTGCCGTCCTTCTCCGCGCTCTTTGGTTCGATGCTCCAGTCGAATCGAGAGGGAAGGCGATCCGTCTACTGCAGAAGCCAATAGGACGTCTTCCGTCCGAGGAACGATTGAGGGGTCTGAAAGTAAAGTTTCTTCTATTAGAAATGTTGCTCTATGTGTTGCTACTGCCGTGGCATTTGGTATTGGGGTGGGTTTGAAAGATGGAGTTGGCAAGGCATCTGAATTTTTTGCCGGGTATCTTCTGGAGCAAAGTTTGTCAGTTGACAATCTCTTTGTCTTTGTTTTGATTTTCAAATACTTTAAAGTGCCAACGGAGTATCAGAATCGGGTGCTTACTTATGGTATTTCTGGTGCAATTGTCTTTCGTCTAACAATCATACTTCTGGGAGCAGCCACTCTGCAGAGATTTGAGGCTGTGAACCTGCTTCTGGCTGCTATACTTCTATTCTCATCATTTCAGCTGTTTGCGAGCAATGAAGAGGATGACGGCGATCTATCAGACAACTTTGTAGTAAAGACGTGCCAACAATTAATTCCTGTTACAGCAACCTATGATGGGGATCGCTTTTTTACACTTCAGGAGGGTGTGAAGAAAGTCTCGAACATTTTGGACAGGCAACACCTTTACTGCTCACCATAG

Protein sequence

MYAFVFVVILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGISGAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQLIPVTATYDGDRFFTLQEGVKKVSNILDRQHLYCSP
Homology
[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy Swiss-Prot
Match: F4JZG9 (Thylakoid membrane protein TERC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TERC PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.4e-63
Identity = 135/221 (61.09%), Postives = 166/221 (75.11%), Query Frame = 0 

Query: 11  NCRPSPRSLVRCSSRIEREGD--------PSTAEANRTSSVRGT---------IEGSESK 70
           N R S    + CS  I++E +        P   + N T+S   +          +  E+ 
Sbjct: 54  NRRLSHLPPIACSRGIDQEDEEKESRELLPHKNDENATTSRSSSSVDSGGLKDYQQEETY 113

Query: 71  VSSIRNVALCVATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKV 130
            +S + VALCV TAVAFGIG+GLK+GVGKASEFFAGY+LEQSLSVDNLFVFVL+FKYFKV
Sbjct: 114 KTSFKTVALCVGTAVAFGIGIGLKEGVGKASEFFAGYILEQSLSVDNLFVFVLVFKYFKV 173

Query: 131 PTEYQNRVLTYGISGAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDD 190
           P  YQN+VLTYGI+GAIVFR T+ILLG ATLQ+FEAVNLLLAA+LL+SSF+LFAS EEDD
Sbjct: 174 PLMYQNKVLTYGIAGAIVFRFTLILLGTATLQKFEAVNLLLAAVLLYSSFKLFAS-EEDD 233

Query: 191 GDLSDNFVVKTCQQLIPVTATYDGDRFFTLQEGVKKVSNIL 215
            DLSDNF+VKTCQ+ IPVT++YDG+RFFT  +G+ K + +L
Sbjct: 234 TDLSDNFIVKTCQRFIPVTSSYDGNRFFTKHDGILKATPLL 273

[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy Swiss-Prot
Match: P96554 (Uncharacterized membrane protein STKORF319 OS=Myxococcus xanthus OX=34 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.8e-22
Identity = 58/154 (37.66%), Postives = 89/154 (57.79%), Query Frame = 0 

Query: 61  ALCVATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNR 120
           AL V+ A+ FG GV  K G     +F  GYL+E+SLSVDN+FVFV+IF   ++P  YQ+R
Sbjct: 48  ALWVSLALVFGAGVWWKFGPEPGLQFITGYLIEKSLSVDNIFVFVVIFSALRIPALYQHR 107

Query: 121 VLTYGISGAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNF 180
           VL +GI  A+  R  +I  G A L RF  +  +    L+ +  +LF    ++D    +  
Sbjct: 108 VLFWGILSALALRAIMIFAGVAMLARFHWLIYVFGGFLIITGVKLFLQRNKEDNP-EEGA 167

Query: 181 VVKTCQQLIPVTATYDGDRFFTLQEGVKKVSNIL 215
           +++  ++ IP T  +DG  FFT++ G K  + +L
Sbjct: 168 LMRLARRTIPSTPNFDGHHFFTVENGRKLATPLL 200

[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy Swiss-Prot
Match: Q8XAJ0 (Putative membrane-bound redox modulator Alx OS=Escherichia coli O157:H7 OX=83334 GN=alx PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 46/126 (36.51%), Postives = 79/126 (62.70%), Query Frame = 0 

Query: 82  KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGISGAIVFRLTIILLGA 141
           +A  F  GYL+E+SL+VDN+FV++++F YF VP   Q RVL YG+ GAIV R  +I  G+
Sbjct: 75  QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134

Query: 142 ATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQLIPVTATYDGDRFF 201
             + +F+ +  +  A LLF+  ++  ++E++ G + D  +V+  +  + +T T D + FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESG-IGDKPLVRWLRGHLRMTDTIDNEHFF 194

Query: 202 TLQEGV 208
             + G+
Sbjct: 195 VRKNGL 199

[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy Swiss-Prot
Match: Q8FDE1 (Putative membrane-bound redox modulator Alx OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=alx PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 46/126 (36.51%), Postives = 79/126 (62.70%), Query Frame = 0 

Query: 82  KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGISGAIVFRLTIILLGA 141
           +A  F  GYL+E+SL+VDN+FV++++F YF VP   Q RVL YG+ GAIV R  +I  G+
Sbjct: 75  QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134

Query: 142 ATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQLIPVTATYDGDRFF 201
             + +F+ +  +  A LLF+  ++  ++E++ G + D  +V+  +  + +T T D + FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESG-IGDKPLVRWLRGHLRMTDTIDNEHFF 194

Query: 202 TLQEGV 208
             + G+
Sbjct: 195 VRKNGL 199

[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy Swiss-Prot
Match: P42601 (Putative membrane-bound redox modulator Alx OS=Escherichia coli (strain K12) OX=83333 GN=alx PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 46/126 (36.51%), Postives = 79/126 (62.70%), Query Frame = 0 

Query: 82  KASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGISGAIVFRLTIILLGA 141
           +A  F  GYL+E+SL+VDN+FV++++F YF VP   Q RVL YG+ GAIV R  +I  G+
Sbjct: 75  QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134

Query: 142 ATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQLIPVTATYDGDRFF 201
             + +F+ +  +  A LLF+  ++  ++E++ G + D  +V+  +  + +T T D + FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESG-IGDKPLVRWLRGHLRMTDTIDNEHFF 194

Query: 202 TLQEGV 208
             + G+
Sbjct: 195 VRKNGL 199

[Close]
BLAST of Cucsat.G13681.T35 vs. NCBI nr
Match: XP_004142102.1 (thylakoid membrane protein TERC, chloroplastic [Cucumis sativus] >KGN54196.1 hypothetical protein Csa_018172 [Cucumis sativus])

HSP 1 Score: 388 bits (997), Expect = 5.17e-133
Identity = 203/207 (98.07%), Postives = 205/207 (99.03%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA 67
           VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA
Sbjct: 47  VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA 106

Query: 68  VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 127
           VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS
Sbjct: 107 VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 166

Query: 128 GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ 187
           GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ
Sbjct: 167 GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ 226

Query: 188 LIPVTATYDGDRFFTLQEGVKKVSNIL 214
           LIPVTATYDGDRFFTLQEGVKK + +L
Sbjct: 227 LIPVTATYDGDRFFTLQEGVKKATPLL 253

[Close]
BLAST of Cucsat.G13681.T35 vs. NCBI nr
Match: XP_008447276.1 (PREDICTED: thylakoid membrane protein TERC, chloroplastic [Cucumis melo] >XP_008447284.1 PREDICTED: thylakoid membrane protein TERC, chloroplastic [Cucumis melo] >KAA0047314.1 thylakoid membrane protein TERC [Cucumis melo var. makuwa])

HSP 1 Score: 374 bits (959), Expect = 3.09e-127
Identity = 195/207 (94.20%), Postives = 200/207 (96.62%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA 67
           VILNC PSPR LVRCSSRIEREGDPSTAEANRTSSVRGTIEG ESKVSSIRNVALCVATA
Sbjct: 47  VILNCHPSPRPLVRCSSRIEREGDPSTAEANRTSSVRGTIEGPESKVSSIRNVALCVATA 106

Query: 68  VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 127
           VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS
Sbjct: 107 VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 166

Query: 128 GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ 187
           GAI FRLTIILLG ATLQRFEAVNLLLAAILLFSSFQLFAS+EEDDGDLSDNFVVKTCQ+
Sbjct: 167 GAIFFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASDEEDDGDLSDNFVVKTCQK 226

Query: 188 LIPVTATYDGDRFFTLQEGVKKVSNIL 214
           LIPVTATYDG+RFFTLQEGVKK + +L
Sbjct: 227 LIPVTATYDGNRFFTLQEGVKKATPLL 253

[Close]
BLAST of Cucsat.G13681.T35 vs. NCBI nr
Match: XP_038883780.1 (thylakoid membrane protein TERC, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 363 bits (933), Expect = 2.75e-123
Identity = 189/207 (91.30%), Postives = 196/207 (94.69%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA 67
           VILNC P+PRSL+RC SRIEREGDPSTAEANRTSSV GTIEG ESKVSS+RNVALCVATA
Sbjct: 47  VILNCHPAPRSLIRCGSRIEREGDPSTAEANRTSSVPGTIEGLESKVSSLRNVALCVATA 106

Query: 68  VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 127
           VAFGIGVGLKDG GKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVP EYQNRVLTYGIS
Sbjct: 107 VAFGIGVGLKDGPGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPMEYQNRVLTYGIS 166

Query: 128 GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ 187
           GAIVFRLTIILLG ATLQRFEAVNLLLAAILLFSSFQLFAS EEDDGDLSDNFVVKTCQ+
Sbjct: 167 GAIVFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASEEEDDGDLSDNFVVKTCQK 226

Query: 188 LIPVTATYDGDRFFTLQEGVKKVSNIL 214
           LIPVTA YDG+RFFTLQEGVKK + +L
Sbjct: 227 LIPVTANYDGNRFFTLQEGVKKATPLL 253

[Close]
BLAST of Cucsat.G13681.T35 vs. NCBI nr
Match: XP_022143940.1 (thylakoid membrane protein TERC, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 333 bits (854), Expect = 2.31e-111
Identity = 176/218 (80.73%), Postives = 189/218 (86.70%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANR-----------TSSVRGTIEGSESKVSS 67
           V+LNC  +PRSL+RC SRIE+EGDPSTAEANR           T SV GT EG ESKVSS
Sbjct: 47  VVLNCHRAPRSLIRCGSRIEKEGDPSTAEANRSQSSGEKEYNRTYSVSGTTEGFESKVSS 106

Query: 68  IRNVALCVATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTE 127
           +RNVALCVATAVAFGIG+GLKDG GKASEF+AGYLLEQSLSVDNLFVFVLIFKYFKVP E
Sbjct: 107 VRNVALCVATAVAFGIGLGLKDGPGKASEFYAGYLLEQSLSVDNLFVFVLIFKYFKVPIE 166

Query: 128 YQNRVLTYGISGAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDL 187
           YQNRVLTYGISGAIVFRLTIILLG ATLQRFEAVNLLLAAILL+SSFQLF S EEDD DL
Sbjct: 167 YQNRVLTYGISGAIVFRLTIILLGTATLQRFEAVNLLLAAILLYSSFQLFGSEEEDDTDL 226

Query: 188 SDNFVVKTCQQLIPVTATYDGDRFFTLQEGVKKVSNIL 214
           SDNFVVK CQ+LIPVTA YDG+ FFTLQ+GVKK + +L
Sbjct: 227 SDNFVVKMCQKLIPVTANYDGNHFFTLQDGVKKATPLL 264

[Close]
BLAST of Cucsat.G13681.T35 vs. NCBI nr
Match: XP_022143939.1 (thylakoid membrane protein TERC, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 333 bits (854), Expect = 3.90e-111
Identity = 176/218 (80.73%), Postives = 189/218 (86.70%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANR-----------TSSVRGTIEGSESKVSS 67
           V+LNC  +PRSL+RC SRIE+EGDPSTAEANR           T SV GT EG ESKVSS
Sbjct: 47  VVLNCHRAPRSLIRCGSRIEKEGDPSTAEANRSQSSGEKEYNRTYSVSGTTEGFESKVSS 106

Query: 68  IRNVALCVATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTE 127
           +RNVALCVATAVAFGIG+GLKDG GKASEF+AGYLLEQSLSVDNLFVFVLIFKYFKVP E
Sbjct: 107 VRNVALCVATAVAFGIGLGLKDGPGKASEFYAGYLLEQSLSVDNLFVFVLIFKYFKVPIE 166

Query: 128 YQNRVLTYGISGAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDL 187
           YQNRVLTYGISGAIVFRLTIILLG ATLQRFEAVNLLLAAILL+SSFQLF S EEDD DL
Sbjct: 167 YQNRVLTYGISGAIVFRLTIILLGTATLQRFEAVNLLLAAILLYSSFQLFGSEEEDDTDL 226

Query: 188 SDNFVVKTCQQLIPVTATYDGDRFFTLQEGVKKVSNIL 214
           SDNFVVK CQ+LIPVTA YDG+ FFTLQ+GVKK + +L
Sbjct: 227 SDNFVVKMCQKLIPVTANYDGNHFFTLQDGVKKATPLL 264

[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy TrEMBL
Match: A0A0A0L220 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293060 PE=4 SV=1)

HSP 1 Score: 388 bits (997), Expect = 2.50e-133
Identity = 203/207 (98.07%), Postives = 205/207 (99.03%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA 67
           VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA
Sbjct: 47  VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA 106

Query: 68  VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 127
           VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS
Sbjct: 107 VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 166

Query: 128 GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ 187
           GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ
Sbjct: 167 GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ 226

Query: 188 LIPVTATYDGDRFFTLQEGVKKVSNIL 214
           LIPVTATYDGDRFFTLQEGVKK + +L
Sbjct: 227 LIPVTATYDGDRFFTLQEGVKKATPLL 253

[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy TrEMBL
Match: A0A1S3BGI3 (thylakoid membrane protein TERC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489749 PE=4 SV=1)

HSP 1 Score: 374 bits (959), Expect = 1.49e-127
Identity = 195/207 (94.20%), Postives = 200/207 (96.62%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA 67
           VILNC PSPR LVRCSSRIEREGDPSTAEANRTSSVRGTIEG ESKVSSIRNVALCVATA
Sbjct: 47  VILNCHPSPRPLVRCSSRIEREGDPSTAEANRTSSVRGTIEGPESKVSSIRNVALCVATA 106

Query: 68  VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 127
           VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS
Sbjct: 107 VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 166

Query: 128 GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ 187
           GAI FRLTIILLG ATLQRFEAVNLLLAAILLFSSFQLFAS+EEDDGDLSDNFVVKTCQ+
Sbjct: 167 GAIFFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASDEEDDGDLSDNFVVKTCQK 226

Query: 188 LIPVTATYDGDRFFTLQEGVKKVSNIL 214
           LIPVTATYDG+RFFTLQEGVKK + +L
Sbjct: 227 LIPVTATYDGNRFFTLQEGVKKATPLL 253

[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy TrEMBL
Match: A0A5A7TWH1 (Thylakoid membrane protein TERC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001310 PE=4 SV=1)

HSP 1 Score: 374 bits (959), Expect = 1.49e-127
Identity = 195/207 (94.20%), Postives = 200/207 (96.62%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANRTSSVRGTIEGSESKVSSIRNVALCVATA 67
           VILNC PSPR LVRCSSRIEREGDPSTAEANRTSSVRGTIEG ESKVSSIRNVALCVATA
Sbjct: 47  VILNCHPSPRPLVRCSSRIEREGDPSTAEANRTSSVRGTIEGPESKVSSIRNVALCVATA 106

Query: 68  VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 127
           VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS
Sbjct: 107 VAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTEYQNRVLTYGIS 166

Query: 128 GAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDLSDNFVVKTCQQ 187
           GAI FRLTIILLG ATLQRFEAVNLLLAAILLFSSFQLFAS+EEDDGDLSDNFVVKTCQ+
Sbjct: 167 GAIFFRLTIILLGTATLQRFEAVNLLLAAILLFSSFQLFASDEEDDGDLSDNFVVKTCQK 226

Query: 188 LIPVTATYDGDRFFTLQEGVKKVSNIL 214
           LIPVTATYDG+RFFTLQEGVKK + +L
Sbjct: 227 LIPVTATYDGNRFFTLQEGVKKATPLL 253

[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy TrEMBL
Match: A0A6J1CQ88 (thylakoid membrane protein TERC, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013731 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 1.12e-111
Identity = 176/218 (80.73%), Postives = 189/218 (86.70%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANR-----------TSSVRGTIEGSESKVSS 67
           V+LNC  +PRSL+RC SRIE+EGDPSTAEANR           T SV GT EG ESKVSS
Sbjct: 47  VVLNCHRAPRSLIRCGSRIEKEGDPSTAEANRSQSSGEKEYNRTYSVSGTTEGFESKVSS 106

Query: 68  IRNVALCVATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTE 127
           +RNVALCVATAVAFGIG+GLKDG GKASEF+AGYLLEQSLSVDNLFVFVLIFKYFKVP E
Sbjct: 107 VRNVALCVATAVAFGIGLGLKDGPGKASEFYAGYLLEQSLSVDNLFVFVLIFKYFKVPIE 166

Query: 128 YQNRVLTYGISGAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDL 187
           YQNRVLTYGISGAIVFRLTIILLG ATLQRFEAVNLLLAAILL+SSFQLF S EEDD DL
Sbjct: 167 YQNRVLTYGISGAIVFRLTIILLGTATLQRFEAVNLLLAAILLYSSFQLFGSEEEDDTDL 226

Query: 188 SDNFVVKTCQQLIPVTATYDGDRFFTLQEGVKKVSNIL 214
           SDNFVVK CQ+LIPVTA YDG+ FFTLQ+GVKK + +L
Sbjct: 227 SDNFVVKMCQKLIPVTANYDGNHFFTLQDGVKKATPLL 264

[Close]
BLAST of Cucsat.G13681.T35 vs. ExPASy TrEMBL
Match: A0A6J1CQT8 (thylakoid membrane protein TERC, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013731 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 1.89e-111
Identity = 176/218 (80.73%), Postives = 189/218 (86.70%), Query Frame = 0 

Query: 8   VILNCRPSPRSLVRCSSRIEREGDPSTAEANR-----------TSSVRGTIEGSESKVSS 67
           V+LNC  +PRSL+RC SRIE+EGDPSTAEANR           T SV GT EG ESKVSS
Sbjct: 47  VVLNCHRAPRSLIRCGSRIEKEGDPSTAEANRSQSSGEKEYNRTYSVSGTTEGFESKVSS 106

Query: 68  IRNVALCVATAVAFGIGVGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPTE 127
           +RNVALCVATAVAFGIG+GLKDG GKASEF+AGYLLEQSLSVDNLFVFVLIFKYFKVP E
Sbjct: 107 VRNVALCVATAVAFGIGLGLKDGPGKASEFYAGYLLEQSLSVDNLFVFVLIFKYFKVPIE 166

Query: 128 YQNRVLTYGISGAIVFRLTIILLGAATLQRFEAVNLLLAAILLFSSFQLFASNEEDDGDL 187
           YQNRVLTYGISGAIVFRLTIILLG ATLQRFEAVNLLLAAILL+SSFQLF S EEDD DL
Sbjct: 167 YQNRVLTYGISGAIVFRLTIILLGTATLQRFEAVNLLLAAILLYSSFQLFGSEEEDDTDL 226

Query: 188 SDNFVVKTCQQLIPVTATYDGDRFFTLQEGVKKVSNIL 214
           SDNFVVK CQ+LIPVTA YDG+ FFTLQ+GVKK + +L
Sbjct: 227 SDNFVVKMCQKLIPVTANYDGNHFFTLQDGVKKATPLL 264

The following BLAST results are available for this feature:
BLAST of Cucsat.G13681.T35 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JZG92.4e-6361.09Thylakoid membrane protein TERC, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
P965547.8e-2237.66Uncharacterized membrane protein STKORF319 OS=Myxococcus xanthus OX=34 PE=3 SV=1[more]
Q8XAJ01.5e-1736.51Putative membrane-bound redox modulator Alx OS=Escherichia coli O157:H7 OX=83334... [more]
Q8FDE11.5e-1736.51Putative membrane-bound redox modulator Alx OS=Escherichia coli O6:H1 (strain CF... [more]
P426011.5e-1736.51Putative membrane-bound redox modulator Alx OS=Escherichia coli (strain K12) OX=... [more]
BLAST of Cucsat.G13681.T35 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142102.15.17e-13398.07thylakoid membrane protein TERC, chloroplastic [Cucumis sativus] >KGN54196.1 hyp... [more]
XP_008447276.13.09e-12794.20PREDICTED: thylakoid membrane protein TERC, chloroplastic [Cucumis melo] >XP_008... [more]
XP_038883780.12.75e-12391.30thylakoid membrane protein TERC, chloroplastic isoform X1 [Benincasa hispida][more]
XP_022143940.12.31e-11180.73thylakoid membrane protein TERC, chloroplastic isoform X2 [Momordica charantia][more]
XP_022143939.13.90e-11180.73thylakoid membrane protein TERC, chloroplastic isoform X1 [Momordica charantia][more]
BLAST of Cucsat.G13681.T35 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2202.50e-13398.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293060 PE=4 SV=1[more]
A0A1S3BGI31.49e-12794.20thylakoid membrane protein TERC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A5A7TWH11.49e-12794.20Thylakoid membrane protein TERC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A6J1CQ881.12e-11180.73thylakoid membrane protein TERC, chloroplastic isoform X2 OS=Momordica charantia... [more]
A0A6J1CQT81.89e-11180.73thylakoid membrane protein TERC, chloroplastic isoform X1 OS=Momordica charantia... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005496Integral membrane protein TerCPFAMPF03741TerCcoord: 87..177
e-value: 1.5E-22
score: 80.2
IPR022369Integral membrane protein TerC, riboswitch-linkedPANTHERPTHR30238:SF0THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTICcoord: 40..213
NoneNo IPR availablePANTHERPTHR30238MEMBRANE BOUND PREDICTED REDOX MODULATORcoord: 40..213

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G13681Cucsat.G13681gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13681.T35.E1Cucsat.G13681.T35.E1exon
Cucsat.G13681.T35.E2Cucsat.G13681.T35.E2exon
Cucsat.G13681.T35.E3Cucsat.G13681.T35.E3exon
Cucsat.G13681.T35.E4Cucsat.G13681.T35.E4exon
Cucsat.G13681.T35.E5Cucsat.G13681.T35.E5exon
Cucsat.G13681.T35.E6Cucsat.G13681.T35.E6exon
Cucsat.G13681.T35.E7Cucsat.G13681.T35.E7exon
Cucsat.G13681.T35.E8Cucsat.G13681.T35.E8exon
Cucsat.G13681.T35.E9Cucsat.G13681.T35.E9exon
Cucsat.G13681.T35.E10Cucsat.G13681.T35.E10exon
Cucsat.G13681.T35.E11Cucsat.G13681.T35.E11exon
Cucsat.G13681.T35.E12Cucsat.G13681.T35.E12exon
Cucsat.G13681.T35.E13Cucsat.G13681.T35.E13exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13681.T35.C9Cucsat.G13681.T35.C9CDS
Cucsat.G13681.T35.C8Cucsat.G13681.T35.C8CDS
Cucsat.G13681.T35.C7Cucsat.G13681.T35.C7CDS
Cucsat.G13681.T35.C6Cucsat.G13681.T35.C6CDS
Cucsat.G13681.T35.C5Cucsat.G13681.T35.C5CDS
Cucsat.G13681.T35.C4Cucsat.G13681.T35.C4CDS
Cucsat.G13681.T35.C3Cucsat.G13681.T35.C3CDS
Cucsat.G13681.T35.C2Cucsat.G13681.T35.C2CDS
Cucsat.G13681.T35.C1Cucsat.G13681.T35.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G13681.T35Cucsat.G13681.T35-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0090351 seedling development
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane