Cucsat.G13635.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13635.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Exonuclease domain-containing protein
Location	ctg184: 38192 .. 47471 (-)
RNA-Seq Expression	Cucsat.G13635.T5
Synteny	Cucsat.G13635.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGATTGTTGTTTTATTTTTTTCATATTTTCCAATTAAGTGTAGACTGAAAATTGGATTTGACGGGGAAGGTGAAGTTGGTGGCGGCAAGACTTTGGGGGAGAGAGAGAGAGAGCGAGCGATGGCGATGAAACCACTTGTGAACGCGTTTTCATTGTTGGAGCTCGACGCTGAAGACGATCAAATTCCCGCTCTTTCTACTTCCTCCAAAGATGACGCTACTGTTTCTTACCCTTCACCAACAGGTTCACTTCTAACCTGATTTAACCTCTTCTTCTTCTTCTTCTTCTTAACTCTCATGTTTTACAACTACAAGGTTGAAGATTATGAGAACTTCAGGAATCCGTTGATAGGGATTAGACCCAGATAGTCTCTCCAGCTGTATTAGAATTTGAAACTATTCTTGTTTGTTTGTTTGTGCCTGCTTGCCTGGTTTTGATTTCTACGGCTTCCTGGATATTCACAAGGCAGAAACCCCATGAATCTAGGCTGCCAAACTAATTGAAACAGTGTATTGGCATATAAGATAGTTTCTTTATGTACTATACTCTTAGTTTCTTCACTTAATATTTAGTTATTTTCTTACTTGGTTTTTCTCATTGTTGGTTTTGTGATAAATTAATCCTTCACAGAGATGTATATTGTAATAATCCATCTTCTTTTATGGATAACACCATTGACGTTTCATGTACAGTGAGTAGGATACATTACTTAGTTGTTAGAATGGTTGATGGTCCTGAGAATTTCTTTTTCTATAGAAGATCCACTGCCTTTTAATCCTTGACACTGTTGTTTGACTAATGGATCAGGAAAAAGAAAGAAGGAAGTTAATATATCTGGTGATATTCTGACGGGAGAAAGACAGAAACAAGGTCAACCAAATGCAGTTGCAGAAGACTACAAGTTTCCTCTTGTTTGGATTGACTTGGAAATGACTGGTACTTAACAACTATTGCTAATCGCTAAGCTTTATACTTGTATAACATGGATTCAGGAGTGAGAGGGGATTATAAGAAACTCACTTTTCCTGTTTTCTTTGCTAGGTTGCAGCCTCCTTTTATTAATTTTTATTTTTTATGCCTTGTGTTCTTCATTTTTTTTTTCAATATAAGGTCAGTTATTCATCATGTTTCTAAATTCTACACTGTGATAATGCCTAAGCCTATACTCGATGGCACTGTTTATCAGGGGAGGCTTTTGGAGTTTTATGATTACATTTATCTTCACCCAGGGTTGAACAGAGTTGATATTCAACTTATCGTTTATAAGTTTTTATTACTCTTTTTTTGTGCAAAATTTTTCTCCATACATTTCTTTTAGTTTTCCTTTGTGCCAATGACATTGACTTCATTTTTTTTTTCTTTTTGGTAATTTCATACTTCAATGAAGCTGTCTATCCCACCCCCTCCCCAAAAGAGAAAAAAAAAAATCAAAATCAAAATATAACCACTATAACTTGCAAGGTTGGTTTTTCTGTGTCTGCCACACTCAAGGCTTTGGGGCAAAAGAAATTGCAACCAACAAAAGTGATCATTTAGCAGCATCTATATTTTTGTTCAAGCTTATCTCTACTATCTAGTAGGTGAAGTTATGTTCGAGTTAAACTACATGCATGCTTTTCTTTTCTTTTCTTTTATTTATTTATTTGTTTTTTTTTTTAATGCATTTTCTGACATCCCAAATAAATAAGGTTTCTACTTTCTTAGTCAGGTGCAATCAAAATTCTAGTTAGACTTCTGTTAGATTCTGTTTACTATTTTATGCAACATCTTTGTCCAGAAAAGAAGGCCTATTGATTGTTGATCAATTATAAGATCTTATTTTCAAAAGACACCAGGAGCAGACTATAAAACATTTGGGATGGGGAGTTGAGAGTTAATGCCTCTAATTAGGCTTTCCTTTCCAAATAATTTTAGAACTGTCAATTTGAGTGTCTTAATGCGACTTTTGAGATCAGTTTTTGTCTTCTCCACAGTATCTTGAATTGTTGAACCCTTTTTTGGCTTATATGCAGGTTTAAATGTTGAAACAGATAGAATACTGGAGATAGCTTGTATTATTACCAATGGCAACCTGACCAAATTGGTTGAGGTATCTTTGCCATTGGCTATTCAACAGTGTTTTCCATGCATGCATTCCCCACTGTTTGTTTATGAGATTTAATTTTGTACTCTCTTTGACTTCACTACACTATTGCCAAATACTCGTCCCTGTTTATATTTGATCTGTCAATAATTTCCTTTTGTAAATAAAGTAAAGAAGAAAAATACAATATTTTTTTTTTAAGAGAGCAAACTAAATAAAATATAGGTTTGAAAAGAATCCTGACCTCTGTATGTCCCTGACACAAGTGAGAGAAGTTCAAAAGTTGCAACTTACAACCTTGATCTCATCGCTTCTTTGTGGTTTGTTATGATTTTTATGCATTCTACTTATCTTTCTAGGGTCCTGATTTAGTGATTCACCAATCAAAAGAATGTCTAGATAAAATGGGAGAATGGTGTCAAAGTCATCATGCAGCCAGTGGTAAGGACCAACAGGCTTAATCAATAGAGCACTTCATCGTATTTTAATGGCTCCTGGCTTTCTGCCTCACTTTTTTTCTTGGGGATGAAACAAATTGTGATTTATGATTTAGGATTGACAAAAAAAGTACTGCGAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTATGTAAAAATTTATATGATGTTTTTCCTTCTCCCCTCTGAATTTTTTAATTTTTGTTACCAGGTTTTTTATTTATACTAATATATGTCGTTTGATCCTTTTTTAAAAAAATTGTGCATTCTTTCATTTTATCTTAAGAAAAGATTTATTTTGTTCTTTTGATTTTAAATTGTCATTTGACCTTTATATTATTATGATAAATTTTGGGTTTAAATCCTATTTGGTTCTTAAATTTTCAATTATGTTCTATTTTGATCTTGAAGTGTTTTGATCCCTTACTTTCAAGTAGGACCCATTTCCCACTTGCAACGAAGATTCTATTAATGGACTAACGGATTTGTGGTGTGTCTATAACCAATGGAATGAGCACGTAACACTAATTTTGACGCCAAAACCGTACCTGAATAAAAACCTAATTGATCTGTATGTGTGACGGGTCAGTTAAGCCATGTAGGAGCCTGATCATTTAAAAATATACTACAAGGCATAAATCTGTTGGCTGGCTCACTAGTAGAATCTTAGTAGGAAGAATCAAAATAGGCATTATTTAATAGCATCGAGAACAAAACAAGTGTGTTAGAAGTTTAGTGACTAAAATAGGATATGCACTTATGGTGCCATAAATGTGTGTGTAATCTGGTTGTCTGTCATTTTGGTCAAATTTAATGCCCTGACATTTGTAATTCTGCAGGTTATACAATTTGTGAAGAAACATGTTTGTACCGATAAACTACACTTGGCTGGAAATTCAGTTTATATGGATTTTATTTTTTTGAAGGTAGTCTCAAAGCAGTCTTCTTTATTTTCTCATAATATCATGCACATACAGTGTGTTAGTAGGTAAATGTTTCAGTTTAGAAATTCTTTCTCCTGCGTTATCTGTTCTTCAGCAACTTTTTGCTGCTTTCATTTTCTTAATGAAGATCATGTCACCTTAAAAATGATATTTTGTATATTACTTAACATTCAATGATACCTCATTCAGTTTACGCATGCCTGATCTATTTGCATTATTGAAAGTTTCCCCTGAATTCGCCAAGAAGAGTTTAGCTCAACTAGCATCCGAGTATTGTATTAGTAACCATGAGGTGAGGTCTGTGGTTCGAATGCCCCTACCAAGAAAAAAAAAGGTTTCTCTTGAATTCTATTAGTTAGAATTTTGAGATTTTTCTTTGTAGGATTGTGATAGGAATATTATTAGAGTATTGTAAGGGTATATTTTAGTTATTAGTTAAGGTGGTAGTTATGGTATTAGGTTATAAATAATAATGAGTGAGAAAGGTAGAGCATGCATTATTTTGGTAAGTGATTTAGGGCTTGAGACAAATCTCAAAAGAGGAAGGGTCCAAGTACCTTAAACACTTGGTTTATTTTGTAGTTTAGTTATCTTTTATGTTTCAATACCTTTGGGATCTGTTGGTGTTTCATTATTCATGTTCATATAATGTAACCAAAAATTTTCGTTGGGATATGCCATCATACCTTCTTCTCCCTTTTTCTTTTTCTATTCAATATCCTCCTCTCGGGCAGTTACAAAAGGATGCGGGAAATGCATATCAACTAGGGGAATAAAATATAGCTAGACCTAGAACCTCTGCTGAATTTCTTTTTACATAAGCTCTTGTTTCTTTCTAAGTATATTCTTAAACTAAAGCTTTTTGTGCATTGCGTCATGAAGTTTTGGTCCTTTTTTAGTTTATACCCACAAACACTTGCTTAGTATTTTTTGTATCAGAACTCTCATCACGTAATAGACTTCGATGAGGATAAGAGAAAGGCCCATGGTTGCACAGAGAGGCAATAAAAAAGAACCTTGAAATTCTGTTGCTTTCTAGCCGAGCAAATAGCAGCTGGGAATGGGATTTAGAACCAAGTTTGACATCTAGAAATCTGTTTATGTTCACTCCCACCAAGCAAAGATGACACGATGATTGACAGGAATTTCTTCTCTTGGTGCAACTTATATTCTAAATAGCATCCCTGATAGACATCCTTCAAGAAAAGGTTGGTCCCAAGAATTCTTAAAATGATGGTGCAATTGAAAAGATTCCAGATTTCAAAGCTTCCATCCCCTTTTACTCTGTTCCCTAATTTAACTGTATATTGCCCTGCAAACAGAAGTGATTTGTCCCACCCACTTATCCCAAGTCTAGATTTCTTCCAGCCAAAATATTCTATGAATCAGCGATCTTCCATAGTGTCAGCCTTCTGAGTCTTTGTTGAAGTGTTAAACTCCACCTAAGTTTCATGCCTAGAGGATGTTCAACCAACTTCCAGTTAAACTGTAGTGAATTCTCAATTTCCCCTTAAATTTAAACAATAGTCCATCCAGGATTCTGCCTGCCTACTTGATTTCCTTTCTCTGGTAAACTTACCACCTTTCCATTTCAAAACTACCAGTTGTAATTTAGTATCACGCTTGGTTTGCTAGATTGTTTCAGGAACTGCCAAAACCAGTTTATTAAAATACCTCATTCCTTCTCCTTACGGTTATAATGCTAGTTTATCATTGCATATTGGTTGTGAGATGATACTCTCCTTCTTGACTACCACCCAAATCAAAGTCTTGGACTCTTGAGTTTTCATTTCACTATCTGAGGCTGAACCACTTTTCCTTTCTATTATTTCTTTCTTCTTCTTTCATACGACCCTTCCCACGTTCACTCTTCTAACAAAACTTGGAAATTTTGCTGATTTAGCATGTAATATATTCTTTTGACGTGGTAATCTTATTGCTTCTATAATTCACCAATTTCTTAGGTAGTTGCACGTACTCTTCTTTGTTCAAAGATCTCTTATTCATCTTCTATCATGCTTTCATAAATACTGCTTTGCAGTGTTTTTTGTTCTAACGGCCTGTTTATTCCCTTCAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCATGTGCTCGTCGATGTCAGTAGTATAAAGACTCTTTGCGATCGCTGGTATCCAAGAGGTAAAGATCTTGACAACTGGAGTGTTTTCACTTTTGAGAAAAATGACGGCCATGTTATTTTGATTTTTCTGTTTCTTATTAAAAATAACAAAGGTAGACGTGTATTATTTTCTTGCAACTATTGGTATGTTATTGGAAACCTGTACAACTATTCTTGTTCAAAGAGATTGAGAAGAAACCAAAGAGATTCTGATATTGAATAATGTGGAGTTCTTATACATTGCTTGTCCACAGTCTCCTCTCCTTATCCCTTAATCCTGACAGAGGAATATGGAAACTTTGAATTGTTCTTATGGGAGTTATCACACATAACCATTAATTCTCATGAAAAGCTTCAAAGAAGATTTCCCCATTTGGTTTTGTCTCCTCAATGGTGTTGTATGTGCAAAACAATCTGAATCTCAAGGTCAACATTTGGTCTATTGTTCTTTTGCTAGATCTTTTTGAAACTACGTTCTCACTAGGTTTAATTGGCAAGCAATCCTCTTGGAAGATCCTAATCTTCTCCTGTCATATACCCTATACCCCTGGTGGCACCTCTTCAAAAAGGAGAGAAGATGATTTGGGAAAATTTTATAAGAGCCTTTGGCCCTTTGCTGGAAGTTATAACCCGAAATAAATATAATAGAAGACATTTTCAAGATAAAGAAATCCCCCTCTGTTCATTTTGTTATGCGATAGTTAATATGTTCTTTATTCACCACTACAACTTCTTTTGTAACTCATCTACAGGGGTTCTCCCCTCTTTTAATTTTATACCGTCCATGAAATTGTTTCTTTTACCTAATAATAATAATACTTGTTGCCTCATGGGGGGATTGTGAGTTCATAGCCAGCTCAATATCATCTCTGAAAGATATTGAGGAGACTTTTAAGTTTTATTAGCACTATTCTCCTGCATCAAACATTTACTTGATTCATAACAATAATAATGGTTCTTGGCCTCTAATGGAAATCTCGCAGGTGCCTATGATATGTTTAGTCTTTTTGTTGACTATCAGTATGTACGATTTACTTTATAAACCAAACATAGACTCAGCTTAGAACATTTGGTTATTCGTTTACTTGTCCATACATTAACAACCCATTTCCTTTCCAGATCGGAAGAAAGCCCCGCCAAAAGAGAATAAACACAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATATTACAAGGAAAATATATTTAAGAATTCAAAAAAGTGATGCAAGAGGAAGCACCATAACCAGAAGATTGCATGCTTGAACGGTACGGAGATTTTACTTTAAATTTCACGTCTATCATTCATCTCCTAATTCAATTGTGTATAATGTACTACTATCTTCTGTTATCGTGGATGTTCTGCTGTTAAGTGGTGGTTGGATAGACTTTTACATCTTACCACTTTGTAAAGTTTAACTCTTTAAGGTGCGTATAAATTTAATTGATGAAATATTTATTTATATCTTATCTGAAAGTTCTTTAGCTGAAATAGTTGCTGGATATATTGCTCGGAGCCTATGTAGTATGAGAAGATTTTATGCATATGATATCTTAACTGAATTTGCGAAATCCAGAAATATTATTTATGAACATGCGTGGTGTGTACCAATTTTGTTGAAATGAACTGATAAAGGGGTAGGATATGCTCGTTCAAAAACTATACATCTTGAAGCTTTTTCTTGAGTACAAGGATCAAGGATGTTTATTTGCTATTTTCTTTATATTTAAGGTATTTTGTTTTGATAAACACTTAGTAATTCAAAGATGTGGCATTCTCTGTCAAATTAATGGTGAAGAAGGAGAAGGCAGCCATGGGAGTGGAGCTCGAGACTGGGAGAAGAAAAGAGGGAAAAGGCTGGAAAAAATATAGAGGAAGCCTATTTTCGTCTTTCTTATTTCTTTCTTTTATGGTAAGCATTTTAACTCAAGGTCCTACCACATCAAATCCTTCGATCTCTATCACGTGATTTTATAACCTATCAATCCTATCATTCTTGAATAATATACAAATTTTTATTTTTTTTCTAGTATTTCAATAACACTAACGTTGTCCATGTCTCCTAACTTTTTTTTTTTTTTTTTGACAAAAACCAATTTCACATGGAGTCAAGAATTCTTACTTAAAAGATCTAGTTGGATCTTCAAGAAAAACGGTGACATACAATCTACCAACGATTTTTCGAAGCGAATAACAACCTAAATTCACGACAAAGAATTGAAGGTGTGTGAATTTTTTTTTAAAATTATTAAACCCTAAGATGAATACATAGTGATAAACAAAACATATAGCTTGAACTATCATGGAGATCATAATACTCTTTTATTCCTAATACTAATTAGCTAATTATTCCAATGCCATTCATATGAAATTCCTTAATATTTAAGAACTATGAAAACATGGACAAAGTGTAGAAAAGTAATGCTAGTGGATTTTGAAATTTTTATTTATTTAAAATTACTTTTTAAAGCCGTTTTAAATAACATAATAGAACATGAAAAAAAAATTATTTTATTAAGGAGAATTTTTAAAAATAGTAGATTTTGCAAATTACGATATGCTGTAGTGATAGAAGATTATGAACCGTGAAATTTTTCTATGACTTGTAAATATTTTAATTTATTTTACTATTTTAAAAAATATTTCTTTTATTTATATAAAATATACTATGAATTACTACCTTTAATTGTAATACCTATAACCTAAATCTATATCTATCTATAATCTTCTATACAACTATATTATACATAAAATCTTTTAGTATGTTGTTATGTTCTAAATGTTTCATGTAGATAACCGTCTTAAATTCGTTGCATGTATTTATATTTACTTTTATTGATACAATTAGATTTGTGTGACATTCAAATTTGGAATAAAATTTGTTCAGAAGCAATTCTTAAATATATTATGATTAGGAGATTCGTCAAAAATAACACAAAATATTTTTATCATATAGCAAAATTTTCAGAATCTATCAATAATAAACATTGATAGATATTGATTTGCTTCTATCGTGGATAAAATCTAAAATTTTGCTATATCTTATAAATATTATAATTTTTGCTATTTTTAAAAATATCCTTACGATTAATTCATGGATAAATATACCTTAATTTTCATAATGATGAAGTAAAAGTATTTTTTTATAAAAAATTATGGACATTTTAATTTTAGATTCTATCACTTAAATTCTTAACAAAACAATTTGGTATAAGTCGGAAATATTGTGTAAAATCTACTCATATTAAAAATTCCTGAAGAAAACTATTTGCGCTAAAATTTGGATGATTATAATATATAAACGGGATGTTTATGAAATGTTAAAGAAGCGAGAGATTTGAGTTAGCAACTCCTCAATCTTCTCATCGCCTTTTCTCTTCACAACCTCACTCATCTCTCTTACTTTCATCCTTAATTCTTCTCTGCTTTTCTCAATCACTACTTCTTTGATCAGTCTTGCAATTTCTTTTCTTTGAATTTTTCCGTCAGGATCTCGTTTAGCCTCTACTCCGATCCCTGCTTCTTCCACTACTCCGGCGTTAATCGGTTGATCTCCGAACACCGGAACTCCAATTATGGGAACCCCAGACACAATACTTTCCAAAACAGAGTTCCATCCACAATGGCTTA

Coding sequence (CDS)

TTGATTGTTGTTTTATTTTTTTCATATTTTCCAATTAAGTGTAGACTGAAAATTGGATTTGACGGGGAAGGTGAAGTTGGTGGCGGCAAGACTTTGGGGGAGAGAGAGAGAGAGCGAGCGATGGCGATGAAACCACTTGTGAACGCGTTTTCATTGTTGGAGCTCGACGCTGAAGACGATCAAATTCCCGCTCTTTCTACTTCCTCCAAAGATGACGCTACTGTTTCTTACCCTTCACCAACAGGAAAAAGAAAGAAGGAAGTTAATATATCTGGTGATATTCTGACGGGAGAAAGACAGAAACAAGGTCAACCAAATGCAGTTGCAGAAGACTACAAGTTTCCTCTTGTTTGGATTGACTTGGAAATGACTGGTACTTAA

Protein sequence

LIVVLFFSYFPIKCRLKIGFDGEGEVGGGKTLGERERERAMAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGT

Homology

[Close]

BLAST of Cucsat.G13635.T5 vs. NCBI nr
Match: XP_004142177.1 (oligoribonuclease [Cucumis sativus] >KGN54054.1 hypothetical protein Csa_017987 [Cucumis sativus])

HSP 1 Score: 172 bits (436), Expect = 4.44e-51
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ
Sbjct: 1   MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQPNAVAEDYKFPLVWIDLEMTG
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTG 85

[Close]

BLAST of Cucsat.G13635.T5 vs. NCBI nr
Match: TYK21705.1 (oligoribonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (403), Expect = 2.76e-48
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQ
Sbjct: 1   MATKPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTGT 126
           KQGQPNAVAEDYKFPLVWIDLEMTGT
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTGT 86

[Close]

BLAST of Cucsat.G13635.T5 vs. NCBI nr
Match: XP_008449845.1 (PREDICTED: oligoribonuclease [Cucumis melo] >XP_008449846.1 PREDICTED: oligoribonuclease [Cucumis melo] >XP_016900790.1 PREDICTED: oligoribonuclease [Cucumis melo])

HSP 1 Score: 157 bits (398), Expect = 2.45e-45
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQ
Sbjct: 1   MATKPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQPNAVAEDYKFPLVWIDLEMTG
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTG 85

[Close]

BLAST of Cucsat.G13635.T5 vs. NCBI nr
Match: XP_038902868.1 (oligoribonuclease isoform X1 [Benincasa hispida] >XP_038902870.1 oligoribonuclease isoform X1 [Benincasa hispida])

HSP 1 Score: 152 bits (384), Expect = 3.17e-43
Identity = 75/85 (88.24%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MAMKPLVNAFS+LELDAEDDQIPALSTSSKDDAT S PS TGK KKEVNISGDILTGE+Q
Sbjct: 1   MAMKPLVNAFSVLELDAEDDQIPALSTSSKDDATASSPSRTGKSKKEVNISGDILTGEKQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQP+  AE+YKFPLVWIDLEMTG
Sbjct: 61  KQGQPDVAAENYKFPLVWIDLEMTG 85

[Close]

BLAST of Cucsat.G13635.T5 vs. NCBI nr
Match: KAA0040081.1 (oligoribonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (354), Expect = 1.06e-40
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 52  LLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAED 111
           +LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQKQGQPNAVAED
Sbjct: 21  VLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQKQGQPNAVAED 80

Query: 112 YKFPLVWIDLEMTGT 126
           YKFPLVWIDLEMTGT
Sbjct: 81  YKFPLVWIDLEMTGT 95

[Close]

BLAST of Cucsat.G13635.T5 vs. ExPASy TrEMBL
Match: A0A0A0KZ28 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279830 PE=3 SV=1)

HSP 1 Score: 172 bits (436), Expect = 2.15e-51
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ
Sbjct: 1   MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQPNAVAEDYKFPLVWIDLEMTG
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTG 85

[Close]

BLAST of Cucsat.G13635.T5 vs. ExPASy TrEMBL
Match: A0A5D3DDV3 (Oligoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00720 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 1.34e-48
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQ
Sbjct: 1   MATKPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTGT 126
           KQGQPNAVAEDYKFPLVWIDLEMTGT
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTGT 86

[Close]

BLAST of Cucsat.G13635.T5 vs. ExPASy TrEMBL
Match: A0A1S3BNX4 (oligoribonuclease OS=Cucumis melo OX=3656 GN=LOC103491603 PE=3 SV=1)

HSP 1 Score: 157 bits (398), Expect = 1.19e-45
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQ
Sbjct: 1   MATKPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQPNAVAEDYKFPLVWIDLEMTG
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTG 85

[Close]

BLAST of Cucsat.G13635.T5 vs. ExPASy TrEMBL
Match: A0A5A7TEJ6 (Oligoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00510 PE=4 SV=1)

HSP 1 Score: 140 bits (354), Expect = 5.11e-41
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 52  LLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAED 111
           +LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQKQGQPNAVAED
Sbjct: 21  VLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQKQGQPNAVAED 80

Query: 112 YKFPLVWIDLEMTGT 126
           YKFPLVWIDLEMTGT
Sbjct: 81  YKFPLVWIDLEMTGT 95

[Close]

BLAST of Cucsat.G13635.T5 vs. ExPASy TrEMBL
Match: A0A6J1H2M6 (oligoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459134 PE=3 SV=1)

HSP 1 Score: 127 bits (319), Expect = 8.72e-34
Identity = 63/83 (75.90%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 43  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 102
           M+P VNAFS+LELDAEDDQ+   ST SKD+A  S  S TGK KKEVNISGDIL G+RQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60

Query: 103 GQPNAVAEDYKFPLVWIDLEMTG 125
            QP+A AEDYKFPLVWIDLEMTG
Sbjct: 61  SQPDAAAEDYKFPLVWIDLEMTG 83

The following BLAST results are available for this feature:

BLAST of Cucsat.G13635.T5 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G13635.T5 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142177.1	4.44e-51	100.00	oligoribonuclease [Cucumis sativus] >KGN54054.1 hypothetical protein Csa_017987 ...	[more]
TYK21705.1	2.76e-48	93.02	oligoribonuclease [Cucumis melo var. makuwa]	[more]
XP_008449845.1	2.45e-45	92.94	PREDICTED: oligoribonuclease [Cucumis melo] >XP_008449846.1 PREDICTED: oligoribo...	[more]
XP_038902868.1	3.17e-43	88.24	oligoribonuclease isoform X1 [Benincasa hispida] >XP_038902870.1 oligoribonuclea...	[more]
KAA0040081.1	1.06e-40	93.33	oligoribonuclease [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G13635.T5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ28	2.15e-51	100.00	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279830...	[more]
A0A5D3DDV3	1.34e-48	93.02	Oligoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00...	[more]
A0A1S3BNX4	1.19e-45	92.94	oligoribonuclease OS=Cucumis melo OX=3656 GN=LOC103491603 PE=3 SV=1	[more]
A0A5A7TEJ6	5.11e-41	93.33	Oligoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00...	[more]
A0A6J1H2M6	8.72e-34	75.90	oligoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459134 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..106

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13635	Cucsat.G13635	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13635.T5.E1	Cucsat.G13635.T5.E1	exon
Cucsat.G13635.T5.E2	Cucsat.G13635.T5.E2	exon
Cucsat.G13635.T5.E3	Cucsat.G13635.T5.E3	exon
Cucsat.G13635.T5.E4	Cucsat.G13635.T5.E4	exon
Cucsat.G13635.T5.E5	Cucsat.G13635.T5.E5	exon
Cucsat.G13635.T5.E6	Cucsat.G13635.T5.E6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13635.T5.C2	Cucsat.G13635.T5.C2	CDS
Cucsat.G13635.T5.C1	Cucsat.G13635.T5.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13635.T5	Cucsat.G13635.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding