Cucsat.G13635 (gene) Cucumber (B10) v3

Overview
NameCucsat.G13635
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionExonuclease domain-containing protein
Locationctg184: 35834 .. 47471 (-)
RNA-Seq ExpressionCucsat.G13635
SyntenyCucsat.G13635
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTGATTGTTGTTTTATTTTTTTCATATTTTCCAATTAAGTGTAGACTGAAAATTGGATTTGACGGGGAAGGTGAAGTTGGTGGCGGCAAGACTTTGGGGGAGAGAGAGAGAGAGCGAGCGATGGCGATGAAACCACTTGTGAACGCGTTTTCATTGTTGGAGCTCGACGCTGAAGACGATCAAATTCCCGCTCTTTCTACTTCCTCCAAAGATGACGCTACTGTTTCTTACCCTTCACCAACAGGTTCACTTCTAACCTGATTTAACCTCTTCTTCTTCTTCTTCTTCTTAACTCTCATGTTTTACAACTACAAGGTTGAAGATTATGAGAACTTCAGGAATCCGTTGATAGGGATTAGACCCAGATAGTCTCTCCAGCTGTATTAGAATTTGAAACTATTCTTGTTTGTTTGTTTGTGCCTGCTTGCCTGGTTTTGATTTCTACGGCTTCCTGGATATTCACAAGGCAGAAACCCCATGAATCTAGGCTGCCAAACTAATTGAAACAGTGTATTGGCATATAAGATAGTTTCTTTATGTACTATACTCTTAGTTTCTTCACTTAATATTTAGTTATTTTCTTACTTGGTTTTTCTCATTGTTGGTTTTGTGATAAATTAATCCTTCACAGAGATGTATATTGTAATAATCCATCTTCTTTTATGGATAACACCATTGACGTTTCATGTACAGTGAGTAGGATACATTACTTAGTTGTTAGAATGGTTGATGGTCCTGAGAATTTCTTTTTCTATAGAAGATCCACTGCCTTTTAATCCTTGACACTGTTGTTTGACTAATGGATCAGGAAAAAGAAAGAAGGAAGTTAATATATCTGGTGATATTCTGACGGGAGAAAGACAGAAACAAGGTCAACCAAATGCAGTTGCAGAAGACTACAAGTTTCCTCTTGTTTGGATTGACTTGGAAATGACTGGTACTTAACAACTATTGCTAATCGCTAAGCTTTATACTTGTATAACATGGATTCAGGAGTGAGAGGGGATTATAAGAAACTCACTTTTCCTGTTTTCTTTGCTAGGTTGCAGCCTCCTTTTATTAATTTTTATTTTTTATGCCTTGTGTTCTTCATTTTTTTTTTCAATATAAGGTCAGTTATTCATCATGTTTCTAAATTCTACACTGTGATAATGCCTAAGCCTATACTCGATGGCACTGTTTATCAGGGGAGGCTTTTGGAGTTTTATGATTACATTTATCTTCACCCAGGGTTGAACAGAGTTGATATTCAACTTATCGTTTATAAGTTTTTATTACTCTTTTTTTGTGCAAAATTTTTCTCCATACATTTCTTTTAGTTTTCCTTTGTGCCAATGACATTGACTTCATTTTTTTTTTCTTTTTGGTAATTTCATACTTCAATGAAGCTGTCTATCCCACCCCCTCCCCAAAAGAGAAAAAAAAAAATCAAAATCAAAATATAACCACTATAACTTGCAAGGTTGGTTTTTCTGTGTCTGCCACACTCAAGGCTTTGGGGCAAAAGAAATTGCAACCAACAAAAGTGATCATTTAGCAGCATCTATATTTTTGTTCAAGCTTATCTCTACTATCTAGTAGGTGAAGTTATGTTCGAGTTAAACTACATGCATGCTTTTCTTTTCTTTTCTTTTATTTATTTATTTGTTTTTTTTTTTAATGCATTTTCTGACATCCCAAATAAATAAGGTTTCTACTTTCTTAGTCAGGTGCAATCAAAATTCTAGTTAGACTTCTGTTAGATTCTGTTTACTATTTTATGCAACATCTTTGTCCAGAAAAGAAGGCCTATTGATTGTTGATCAATTATAAGATCTTATTTTCAAAAGACACCAGGAGCAGACTATAAAACATTTGGGATGGGGAGTTGAGAGTTAATGCCTCTAATTAGGCTTTCCTTTCCAAATAATTTTAGAACTGTCAATTTGAGTGTCTTAATGCGACTTTTGAGATCAGTTTTTGTCTTCTCCACAGTATCTTGAATTGTTGAACCCTTTTTTGGCTTATATGCAGGTTTAAATGTTGAAACAGATAGAATACTGGAGATAGCTTGTATTATTACCAATGGCAACCTGACCAAATTGGTTGAGGTATCTTTGCCATTGGCTATTCAACAGTGTTTTCCATGCATGCATTCCCCACTGTTTGTTTATGAGATTTAATTTTGTACTCTCTTTGACTTCACTACACTATTGCCAAATACTCGTCCCTGTTTATATTTGATCTGTCAATAATTTCCTTTTGTAAATAAAGTAAAGAAGAAAAATACAATATTTTTTTTTTAAGAGAGCAAACTAAATAAAATATAGGTTTGAAAAGAATCCTGACCTCTGTATGTCCCTGACACAAGTGAGAGAAGTTCAAAAGTTGCAACTTACAACCTTGATCTCATCGCTTCTTTGTGGTTTGTTATGATTTTTATGCATTCTACTTATCTTTCTAGGGTCCTGATTTAGTGATTCACCAATCAAAAGAATGTCTAGATAAAATGGGAGAATGGTGTCAAAGTCATCATGCAGCCAGTGGTAAGGACCAACAGGCTTAATCAATAGAGCACTTCATCGTATTTTAATGGCTCCTGGCTTTCTGCCTCACTTTTTTTCTTGGGGATGAAACAAATTGTGATTTATGATTTAGGATTGACAAAAAAAGTACTGCGAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTATGTAAAAATTTATATGATGTTTTTCCTTCTCCCCTCTGAATTTTTTAATTTTTGTTACCAGGTTTTTTATTTATACTAATATATGTCGTTTGATCCTTTTTTAAAAAAATTGTGCATTCTTTCATTTTATCTTAAGAAAAGATTTATTTTGTTCTTTTGATTTTAAATTGTCATTTGACCTTTATATTATTATGATAAATTTTGGGTTTAAATCCTATTTGGTTCTTAAATTTTCAATTATGTTCTATTTTGATCTTGAAGTGTTTTGATCCCTTACTTTCAAGTAGGACCCATTTCCCACTTGCAACGAAGATTCTATTAATGGACTAACGGATTTGTGGTGTGTCTATAACCAATGGAATGAGCACGTAACACTAATTTTGACGCCAAAACCGTACCTGAATAAAAACCTAATTGATCTGTATGTGTGACGGGTCAGTTAAGCCATGTAGGAGCCTGATCATTTAAAAATATACTACAAGGCATAAATCTGTTGGCTGGCTCACTAGTAGAATCTTAGTAGGAAGAATCAAAATAGGCATTATTTAATAGCATCGAGAACAAAACAAGTGTGTTAGAAGTTTAGTGACTAAAATAGGATATGCACTTATGGTGCCATAAATGTGTGTGTAATCTGGTTGTCTGTCATTTTGGTCAAATTTAATGCCCTGACATTTGTAATTCTGCAGGTTATACAATTTGTGAAGAAACATGTTTGTACCGATAAACTACACTTGGCTGGAAATTCAGTTTATATGGATTTTATTTTTTTGAAGGTAGTCTCAAAGCAGTCTTCTTTATTTTCTCATAATATCATGCACATACAGTGTGTTAGTAGGTAAATGTTTCAGTTTAGAAATTCTTTCTCCTGCGTTATCTGTTCTTCAGCAACTTTTTGCTGCTTTCATTTTCTTAATGAAGATCATGTCACCTTAAAAATGATATTTTGTATATTACTTAACATTCAATGATACCTCATTCAGTTTACGCATGCCTGATCTATTTGCATTATTGAAAGTTTCCCCTGAATTCGCCAAGAAGAGTTTAGCTCAACTAGCATCCGAGTATTGTATTAGTAACCATGAGGTGAGGTCTGTGGTTCGAATGCCCCTACCAAGAAAAAAAAAGGTTTCTCTTGAATTCTATTAGTTAGAATTTTGAGATTTTTCTTTGTAGGATTGTGATAGGAATATTATTAGAGTATTGTAAGGGTATATTTTAGTTATTAGTTAAGGTGGTAGTTATGGTATTAGGTTATAAATAATAATGAGTGAGAAAGGTAGAGCATGCATTATTTTGGTAAGTGATTTAGGGCTTGAGACAAATCTCAAAAGAGGAAGGGTCCAAGTACCTTAAACACTTGGTTTATTTTGTAGTTTAGTTATCTTTTATGTTTCAATACCTTTGGGATCTGTTGGTGTTTCATTATTCATGTTCATATAATGTAACCAAAAATTTTCGTTGGGATATGCCATCATACCTTCTTCTCCCTTTTTCTTTTTCTATTCAATATCCTCCTCTCGGGCAGTTACAAAAGGATGCGGGAAATGCATATCAACTAGGGGAATAAAATATAGCTAGACCTAGAACCTCTGCTGAATTTCTTTTTACATAAGCTCTTGTTTCTTTCTAAGTATATTCTTAAACTAAAGCTTTTTGTGCATTGCGTCATGAAGTTTTGGTCCTTTTTTAGTTTATACCCACAAACACTTGCTTAGTATTTTTTGTATCAGAACTCTCATCACGTAATAGACTTCGATGAGGATAAGAGAAAGGCCCATGGTTGCACAGAGAGGCAATAAAAAAGAACCTTGAAATTCTGTTGCTTTCTAGCCGAGCAAATAGCAGCTGGGAATGGGATTTAGAACCAAGTTTGACATCTAGAAATCTGTTTATGTTCACTCCCACCAAGCAAAGATGACACGATGATTGACAGGAATTTCTTCTCTTGGTGCAACTTATATTCTAAATAGCATCCCTGATAGACATCCTTCAAGAAAAGGTTGGTCCCAAGAATTCTTAAAATGATGGTGCAATTGAAAAGATTCCAGATTTCAAAGCTTCCATCCCCTTTTACTCTGTTCCCTAATTTAACTGTATATTGCCCTGCAAACAGAAGTGATTTGTCCCACCCACTTATCCCAAGTCTAGATTTCTTCCAGCCAAAATATTCTATGAATCAGCGATCTTCCATAGTGTCAGCCTTCTGAGTCTTTGTTGAAGTGTTAAACTCCACCTAAGTTTCATGCCTAGAGGATGTTCAACCAACTTCCAGTTAAACTGTAGTGAATTCTCAATTTCCCCTTAAATTTAAACAATAGTCCATCCAGGATTCTGCCTGCCTACTTGATTTCCTTTCTCTGGTAAACTTACCACCTTTCCATTTCAAAACTACCAGTTGTAATTTAGTATCACGCTTGGTTTGCTAGATTGTTTCAGGAACTGCCAAAACCAGTTTATTAAAATACCTCATTCCTTCTCCTTACGGTTATAATGCTAGTTTATCATTGCATATTGGTTGTGAGATGATACTCTCCTTCTTGACTACCACCCAAATCAAAGTCTTGGACTCTTGAGTTTTCATTTCACTATCTGAGGCTGAACCACTTTTCCTTTCTATTATTTCTTTCTTCTTCTTTCATACGACCCTTCCCACGTTCACTCTTCTAACAAAACTTGGAAATTTTGCTGATTTAGCATGTAATATATTCTTTTGACGTGGTAATCTTATTGCTTCTATAATTCACCAATTTCTTAGGTAGTTGCACGTACTCTTCTTTGTTCAAAGATCTCTTATTCATCTTCTATCATGCTTTCATAAATACTGCTTTGCAGTGTTTTTTGTTCTAACGGCCTGTTTATTCCCTTCAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCATGTGCTCGTCGATGTCAGTAGTATAAAGACTCTTTGCGATCGCTGGTATCCAAGAGGTAAAGATCTTGACAACTGGAGTGTTTTCACTTTTGAGAAAAATGACGGCCATGTTATTTTGATTTTTCTGTTTCTTATTAAAAATAACAAAGGTAGACGTGTATTATTTTCTTGCAACTATTGGTATGTTATTGGAAACCTGTACAACTATTCTTGTTCAAAGAGATTGAGAAGAAACCAAAGAGATTCTGATATTGAATAATGTGGAGTTCTTATACATTGCTTGTCCACAGTCTCCTCTCCTTATCCCTTAATCCTGACAGAGGAATATGGAAACTTTGAATTGTTCTTATGGGAGTTATCACACATAACCATTAATTCTCATGAAAAGCTTCAAAGAAGATTTCCCCATTTGGTTTTGTCTCCTCAATGGTGTTGTATGTGCAAAACAATCTGAATCTCAAGGTCAACATTTGGTCTATTGTTCTTTTGCTAGATCTTTTTGAAACTACGTTCTCACTAGGTTTAATTGGCAAGCAATCCTCTTGGAAGATCCTAATCTTCTCCTGTCATATACCCTATACCCCTGGTGGCACCTCTTCAAAAAGGAGAGAAGATGATTTGGGAAAATTTTATAAGAGCCTTTGGCCCTTTGCTGGAAGTTATAACCCGAAATAAATATAATAGAAGACATTTTCAAGATAAAGAAATCCCCCTCTGTTCATTTTGTTATGCGATAGTTAATATGTTCTTTATTCACCACTACAACTTCTTTTGTAACTCATCTACAGGGGTTCTCCCCTCTTTTAATTTTATACCGTCCATGAAATTGTTTCTTTTACCTAATAATAATAATACTTGTTGCCTCATGGGGGGATTGTGAGTTCATAGCCAGCTCAATATCATCTCTGAAAGATATTGAGGAGACTTTTAAGTTTTATTAGCACTATTCTCCTGCATCAAACATTTACTTGATTCATAACAATAATAATGGTTCTTGGCCTCTAATGGAAATCTCGCAGGTGCCTATGATATGTTTAGTCTTTTTGTTGACTATCAGTATGTACGATTTACTTTATAAACCAAACATAGACTCAGCTTAGAACATTTGGTTATTCGTTTACTTGTCCATACATTAACAACCCATTTCCTTTCCAGATCGGAAGAAAGCCCCGCCAAAAGAGAATAAACACAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATATTACAAGGAAAATATATTTAAGAATTCAAAAAAGTGATGCAAGAGGAAGCACCATAACCAGAAGATTGCATGCTTGAACGGTACGGAGATTTTACTTTAAATTTCACGTCTATCATTCATCTCCTAATTCAATTGTGTATAATGTACTACTATCTTCTGTTATCGTGGATGTTCTGCTGTTAAGTGGTGGTTGGATAGACTTTTACATCTTACCACTTTGTAAAGTTTAACTCTTTAAGGTGCGTATAAATTTAATTGATGAAATATTTATTTATATCTTATCTGAAAGTTCTTTAGCTGAAATAGTTGCTGGATATATTGCTCGGAGCCTATGTAGTATGAGAAGATTTTATGCATATGATATCTTAACTGAATTTGCGAAATCCAGAAATATTATTTATGAACATGCGTGGTGTGTACCAATTTTGTTGAAATGAACTGATAAAGGGGTAGGATATGCTCGTTCAAAAACTATACATCTTGAAGCTTTTTCTTGAGTACAAGGATCAAGGATGTTTATTTGCTATTTTCTTTATATTTAAGGTATTTTGTTTTGATAAACACTTAGTAATTCAAAGATGTGGCATTCTCTGTCAAATTAATGGTGAAGAAGGAGAAGGCAGCCATGGGAGTGGAGCTCGAGACTGGGAGAAGAAAAGAGGGAAAAGGCTGGAAAAAATATAGAGGAAGCCTATTTTCGTCTTTCTTATTTCTTTCTTTTATGGTAAGCATTTTAACTCAAGGTCCTACCACATCAAATCCTTCGATCTCTATCACGTGATTTTATAACCTATCAATCCTATCATTCTTGAATAATATACAAATTTTTATTTTTTTTCTAGTATTTCAATAACACTAACGTTGTCCATGTCTCCTAACTTTTTTTTTTTTTTTTTGACAAAAACCAATTTCACATGGAGTCAAGAATTCTTACTTAAAAGATCTAGTTGGATCTTCAAGAAAAACGGTGACATACAATCTACCAACGATTTTTCGAAGCGAATAACAACCTAAATTCACGACAAAGAATTGAAGGTGTGTGAATTTTTTTTTAAAATTATTAAACCCTAAGATGAATACATAGTGATAAACAAAACATATAGCTTGAACTATCATGGAGATCATAATACTCTTTTATTCCTAATACTAATTAGCTAATTATTCCAATGCCATTCATATGAAATTCCTTAATATTTAAGAACTATGAAAACATGGACAAAGTGTAGAAAAGTAATGCTAGTGGATTTTGAAATTTTTATTTATTTAAAATTACTTTTTAAAGCCGTTTTAAATAACATAATAGAACATGAAAAAAAAATTATTTTATTAAGGAGAATTTTTAAAAATAGTAGATTTTGCAAATTACGATATGCTGTAGTGATAGAAGATTATGAACCGTGAAATTTTTCTATGACTTGTAAATATTTTAATTTATTTTACTATTTTAAAAAATATTTCTTTTATTTATATAAAATATACTATGAATTACTACCTTTAATTGTAATACCTATAACCTAAATCTATATCTATCTATAATCTTCTATACAACTATATTATACATAAAATCTTTTAGTATGTTGTTATGTTCTAAATGTTTCATGTAGATAACCGTCTTAAATTCGTTGCATGTATTTATATTTACTTTTATTGATACAATTAGATTTGTGTGACATTCAAATTTGGAATAAAATTTGTTCAGAAGCAATTCTTAAATATATTATGATTAGGAGATTCGTCAAAAATAACACAAAATATTTTTATCATATAGCAAAATTTTCAGAATCTATCAATAATAAACATTGATAGATATTGATTTGCTTCTATCGTGGATAAAATCTAAAATTTTGCTATATCTTATAAATATTATAATTTTTGCTATTTTTAAAAATATCCTTACGATTAATTCATGGATAAATATACCTTAATTTTCATAATGATGAAGTAAAAGTATTTTTTTATAAAAAATTATGGACATTTTAATTTTAGATTCTATCACTTAAATTCTTAACAAAACAATTTGGTATAAGTCGGAAATATTGTGTAAAATCTACTCATATTAAAAATTCCTGAAGAAAACTATTTGCGCTAAAATTTGGATGATTATAATATATAAACGGGATGTTTATGAAATGTTAAAGAAGCGAGAGATTTGAGTTAGCAACTCCTCAATCTTCTCATCGCCTTTTCTCTTCACAACCTCACTCATCTCTCTTACTTTCATCCTTAATTCTTCTCTGCTTTTCTCAATCACTACTTCTTTGATCAGTCTTGCAATTTCTTTTCTTTGAATTTTTCCGTCAGGATCTCGTTTAGCCTCTACTCCGATCCCTGCTTCTTCCACTACTCCGGCGTTAATCGGTTGATCTCCGAACACCGGAACTCCAATTATGGGAACCCCAGACACAATACTTTCCAAAACAGAGTTCCATCCACAATGGCTTACAAATCCCCCAATGCTTCCATGCTTCTGTATCTTCCCCTGCGGAGCCCATCCTTCCACTACCATTGCTCTTTCTCCACTCTTCTCCAGCAATTCCCTTCTCCTGATTTGTTGTTCTTCATCTCCTTTTTTATTAATCCGTTCAACCCATATGAAATTCGCCTCACTTTCTACTAACCCTTGTACTATTTCTTCCTTTTCTTCCTCCGATGCGTAGCTTTCGCTTCCCATTGACGCTAGAACCGTTGACAGAGCTTCCTTTTTGTCCAGCCAATTCTTAATTCTTGAATAATCTTCATCTTCTTCATCATTCTCACTTGGTTCGTACACCAATGGCCCAACTGGGATTACTTTCTTTTTTGATAAAAGGAAGATATAATCCATGTGTTCTCCCTCCACCTCTTTGAAGCTATTAATAAGAATTACATCGCGAGATTTATTAAGGCATTCGAAAAAAGATTCTGTGACTATACGGATCTGTTCTGAAGGGTTAGAGTCGACCTTGGATTTCCAATGATTGTGAAGTACAAAATCTGAGAATGGGAATTTAGAACCGGGGCGATGAGTTGCGTGAAAGCTAAAGGAAATGATGGCAGCGCTGGAGGTGTTGAAATGGATGGCGGGTATGTTAAGGGAGGAAGCTAAGCGAGGAGCCCAAGGCTGGAAACAGTCATAAATGAGGAGATGTGGAGAAAGTGTTTTTAAAATTGTCTCAAAGAGAGGGGCGGCGGCAGCGAAGGCTTGGTAAAGGACGGGCGTAAGGTGAGGAGGGAGGGCGTTGGTTGTGTGAAGATGGGGAGGAAGGTCAGGAGAAGAAGGGAGATGAAGCTCCACAAGTTGAATGGAAGGAGAAGGAATTAGCTTTGGTTTAATGGAGTCGAGATTAACAGGAGTTGAGCAGAAATAGATGAGGAAGTTTTTCCTTGTAGAGAGAGCTTTGGCGAGCTCCAAGTAAGGAGAGAGATGGCCATAGCCAAGCCATGGAAACATCAAAATGGTAGTGGTGGTTGGAGTTGAAGCTTGGTGGGTATCCATGGCCATGCAAACAATGGGCTGAGAGACTGGGTTAACAAAGCTTTGTATTATTTATAGAGGGAGTAGGGAATGGGGAACGGGGACTGGGGACTGGGGAGGAGTATCGTATCTGTTACCACGTGTAGCACGTGGTATGGGTAGATTACAAACCCATGCAAATTGCAAATTGCAAAATTGCAAAATCATATAAAATAAATAAGTAATCATTATATATTTTAAAATATTTTAGAGAATAAAGGAACAAATATGGATAAATGCAAAATTAATTTTATTATTATTGTTGTTGTTGATTTATTATATTTAGGTGTATTTATATTTTTGTATTGGTTTCCTATAATTTAGTTTTATTTGGTGTGATTTATGGATTTTGTTTATATGTTATTTTTGTGATTTATGCCATCTTATATTTTTTATTGGTTCCATGTAATTTAAAGTTTATTTTATGTGATTTTATAAAACTTTTTATTGATTTAAATTTTATTCTATTGCTCTTTTTATATGTATATAAAATTACAGACAATTTTGAGTTATAAATGTTGAAATATTTAACATACTTTATTATTGTTATTTAGAGAGAAAAAAAAAAGAAACATTTAAGAATTTTCAAACATTTCGATATTTTATGGGATTGTCGTTGGGGTTGATTAAGTTAAATTGATATCTCGAGTTACGTTAGTCCAATCATGATGATGTCGGCATTTGAAACCGGATATTCAAGAGTCGATCAATCGCAAGCCTTTTGAGCAAGATATTAGGTTAGAGGCAGGTCCATTGTCGTCAAACTTTGGGCAAGATATGATTTAGGAACCGATCTCCTAAATTGAAAATAAAAAAAATACTTTTTAAATAAGTTTAAACAACAATAAAATTGAACCAATTTTTCATTTAAAAAAAAAAAAACATGAATGATAGTAAATTTTTTCATCTACCAAATGGGTCCTAGACTCTGGTACCATAACTCATCTGACAGGTAATTCTCACATATTTTCTAGATCGATGTCCCCTGCCCCTTTTCCATATGTTACATTGGTCGATGGCTCCACATCTTTTGTTTTTGGCTTTGGCACTATTCACCGTACCTTATCATTTTCTCTCTCTTCTATGTTACGTTTGTCTAACTTATCCTTTAATTGAATTTCTACTAGTCAACTTACTTTTGACCTAAATTGTGTTGTCATGTTCTTTTTTGGTATTGTTTGTTTCAGGATCATGTGACGAAGAAGATTATTAGTAGAGGATATGAGTCAGAAGACCTCTATCTCTTTGATCATAAAGTATCACAAGCTATGGCGTGTCCTGTCGTTCCCTCTCCTTTTGAAGTTCAT

Coding sequence (CDS)

TTGATTGTTGTTTTATTTTTTTCATATTTTCCAATTAAGTGTAGACTGAAAATTGGATTTGACGGGGAAGGTGAAGTTGGTGGCGGCAAGACTTTGGGGGAGAGAGAGAGAGAGCGAGCGATGGCGATGAAACCACTTGTGAACGCGTTTTCATTGTTGGAGCTCGACGCTGAAGACGATCAAATTCCCGCTCTTTCTACTTCCTCCAAAGATGACGCTACTGTTTCTTACCCTTCACCAACAGGAAAAAGAAAGAAGGAAGTTAATATATCTGGTGATATTCTGACGGGAGAAAGACAGAAACAAGGTCAACCAAATGCAGTTGCAGAAGACTACAAGTTTCCTCTTGTTTGGATTGACTTGGAAATGACTGGTACTTAA

Protein sequence

LIVVLFFSYFPIKCRLKIGFDGEGEVGGGKTLGERERERAMAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGT
Homology
[Close]
BLAST of Cucsat.G13635 vs. NCBI nr
Match: XP_004142177.1 (oligoribonuclease [Cucumis sativus] >KGN54054.1 hypothetical protein Csa_017987 [Cucumis sativus])

HSP 1 Score: 172 bits (436), Expect = 4.44e-51
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ
Sbjct: 1   MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQPNAVAEDYKFPLVWIDLEMTG
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTG 85

[Close]
BLAST of Cucsat.G13635 vs. NCBI nr
Match: TYK21705.1 (oligoribonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (403), Expect = 2.76e-48
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQ
Sbjct: 1   MATKPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTGT 126
           KQGQPNAVAEDYKFPLVWIDLEMTGT
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTGT 86

[Close]
BLAST of Cucsat.G13635 vs. NCBI nr
Match: XP_008449845.1 (PREDICTED: oligoribonuclease [Cucumis melo] >XP_008449846.1 PREDICTED: oligoribonuclease [Cucumis melo] >XP_016900790.1 PREDICTED: oligoribonuclease [Cucumis melo])

HSP 1 Score: 157 bits (398), Expect = 2.45e-45
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQ
Sbjct: 1   MATKPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQPNAVAEDYKFPLVWIDLEMTG
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTG 85

[Close]
BLAST of Cucsat.G13635 vs. NCBI nr
Match: XP_038902868.1 (oligoribonuclease isoform X1 [Benincasa hispida] >XP_038902870.1 oligoribonuclease isoform X1 [Benincasa hispida])

HSP 1 Score: 152 bits (384), Expect = 3.17e-43
Identity = 75/85 (88.24%), Postives = 79/85 (92.94%), Query Frame = 0 

Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MAMKPLVNAFS+LELDAEDDQIPALSTSSKDDAT S PS TGK KKEVNISGDILTGE+Q
Sbjct: 1   MAMKPLVNAFSVLELDAEDDQIPALSTSSKDDATASSPSRTGKSKKEVNISGDILTGEKQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQP+  AE+YKFPLVWIDLEMTG
Sbjct: 61  KQGQPDVAAENYKFPLVWIDLEMTG 85

[Close]
BLAST of Cucsat.G13635 vs. NCBI nr
Match: KAA0040081.1 (oligoribonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (354), Expect = 1.06e-40
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0 

Query: 52  LLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAED 111
           +LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQKQGQPNAVAED
Sbjct: 21  VLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQKQGQPNAVAED 80

Query: 112 YKFPLVWIDLEMTGT 126
           YKFPLVWIDLEMTGT
Sbjct: 81  YKFPLVWIDLEMTGT 95

[Close]
BLAST of Cucsat.G13635 vs. ExPASy TrEMBL
Match: A0A0A0KZ28 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279830 PE=3 SV=1)

HSP 1 Score: 172 bits (436), Expect = 2.15e-51
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ
Sbjct: 1   MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQPNAVAEDYKFPLVWIDLEMTG
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTG 85

[Close]
BLAST of Cucsat.G13635 vs. ExPASy TrEMBL
Match: A0A5D3DDV3 (Oligoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00720 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 1.34e-48
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQ
Sbjct: 1   MATKPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTGT 126
           KQGQPNAVAEDYKFPLVWIDLEMTGT
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTGT 86

[Close]
BLAST of Cucsat.G13635 vs. ExPASy TrEMBL
Match: A0A1S3BNX4 (oligoribonuclease OS=Cucumis melo OX=3656 GN=LOC103491603 PE=3 SV=1)

HSP 1 Score: 157 bits (398), Expect = 1.19e-45
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 41  MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 100
           MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQ
Sbjct: 1   MATKPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQ 60

Query: 101 KQGQPNAVAEDYKFPLVWIDLEMTG 125
           KQGQPNAVAEDYKFPLVWIDLEMTG
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTG 85

[Close]
BLAST of Cucsat.G13635 vs. ExPASy TrEMBL
Match: A0A5A7TEJ6 (Oligoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00510 PE=4 SV=1)

HSP 1 Score: 140 bits (354), Expect = 5.11e-41
Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0 

Query: 52  LLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAED 111
           +LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQKQGQPNAVAED
Sbjct: 21  VLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQKQGQPNAVAED 80

Query: 112 YKFPLVWIDLEMTGT 126
           YKFPLVWIDLEMTGT
Sbjct: 81  YKFPLVWIDLEMTGT 95

[Close]
BLAST of Cucsat.G13635 vs. ExPASy TrEMBL
Match: A0A6J1H2M6 (oligoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459134 PE=3 SV=1)

HSP 1 Score: 127 bits (319), Expect = 8.72e-34
Identity = 63/83 (75.90%), Postives = 69/83 (83.13%), Query Frame = 0 

Query: 43  MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 102
           M+P VNAFS+LELDAEDDQ+   ST SKD+A  S  S TGK KKEVNISGDIL G+RQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60

Query: 103 GQPNAVAEDYKFPLVWIDLEMTG 125
            QP+A AEDYKFPLVWIDLEMTG
Sbjct: 61  SQPDAAAEDYKFPLVWIDLEMTG 83

The following BLAST results are available for this feature:
BLAST of Cucsat.G13635 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G13635 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142177.14.44e-51100.00oligoribonuclease [Cucumis sativus] >KGN54054.1 hypothetical protein Csa_017987 ... [more]
TYK21705.12.76e-4893.02oligoribonuclease [Cucumis melo var. makuwa][more]
XP_008449845.12.45e-4592.94PREDICTED: oligoribonuclease [Cucumis melo] >XP_008449846.1 PREDICTED: oligoribo... [more]
XP_038902868.13.17e-4388.24oligoribonuclease isoform X1 [Benincasa hispida] >XP_038902870.1 oligoribonuclea... [more]
KAA0040081.11.06e-4093.33oligoribonuclease [Cucumis melo var. makuwa][more]
BLAST of Cucsat.G13635 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ282.15e-51100.00Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279830... [more]
A0A5D3DDV31.34e-4893.02Oligoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00... [more]
A0A1S3BNX41.19e-4592.94oligoribonuclease OS=Cucumis melo OX=3656 GN=LOC103491603 PE=3 SV=1[more]
A0A5A7TEJ65.11e-4193.33Oligoribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00... [more]
A0A6J1H2M68.72e-3475.90oligoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459134 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..58
e-value: 8.1E-9
score: 37.1
NoneNo IPR availablePANTHERPTHR11046:SF16RIBONUCLEASE H-LIKE DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..37
IPR022894OligoribonucleasePANTHERPTHR11046OLIGORIBONUCLEASE, MITOCHONDRIALcoord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G13635.T4Cucsat.G13635.T4mRNA
Cucsat.G13635.T1Cucsat.G13635.T1mRNA
Cucsat.G13635.T5Cucsat.G13635.T5mRNA
Cucsat.G13635.T13Cucsat.G13635.T13mRNA
Cucsat.G13635.T7Cucsat.G13635.T7mRNA
Cucsat.G13635.T2Cucsat.G13635.T2mRNA
Cucsat.G13635.T8Cucsat.G13635.T8mRNA
Cucsat.G13635.T9Cucsat.G13635.T9mRNA
Cucsat.G13635.T14Cucsat.G13635.T14mRNA
Cucsat.G13635.T15Cucsat.G13635.T15mRNA
Cucsat.G13635.T10Cucsat.G13635.T10mRNA
Cucsat.G13635.T19Cucsat.G13635.T19mRNA
Cucsat.G13635.T28Cucsat.G13635.T28mRNA
Cucsat.G13635.T27Cucsat.G13635.T27mRNA
Cucsat.G13635.T25Cucsat.G13635.T25mRNA
Cucsat.G13635.T24Cucsat.G13635.T24mRNA
Cucsat.G13635.T23Cucsat.G13635.T23mRNA
Cucsat.G13635.T22Cucsat.G13635.T22mRNA
Cucsat.G13635.T21Cucsat.G13635.T21mRNA
Cucsat.G13635.T6Cucsat.G13635.T6mRNA
Cucsat.G13635.T3Cucsat.G13635.T3mRNA
Cucsat.G13635.T26Cucsat.G13635.T26mRNA
Cucsat.G13635.T11Cucsat.G13635.T11mRNA
Cucsat.G13635.T17Cucsat.G13635.T17mRNA
Cucsat.G13635.T16Cucsat.G13635.T16mRNA
Cucsat.G13635.T12Cucsat.G13635.T12mRNA
Cucsat.G13635.T29Cucsat.G13635.T29mRNA
Cucsat.G13635.T20Cucsat.G13635.T20mRNA
Cucsat.G13635.T18Cucsat.G13635.T18mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component GO:0005739 mitochondrion
molecular_function GO:0000175 3'-5'-exoribonuclease activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding