Cucsat.G13427.T19 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G13427.T19
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionLon N-terminal domain-containing protein
Locationctg1838: 6512300 .. 6516051 (+)
RNA-Seq ExpressionCucsat.G13427.T19
SyntenyCucsat.G13427.T19
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAACTAAGCATCGGGCTGCAAAACCAAAATTTCCGATACCGAGTCGGAACATTTTCATTTTCGTACCGCGCAAGTCCAAGACGAAGATGGCCGATTAGAGAGATCGAACTCCATGAAACTTCTTCCTCCTCATCGCAACGCCCACTCCCGAATCGTACTCCTCTCCTCCTCCTCCTCCTCCTCCTCTGCCGCCGCTCTCTTAACTTAGCCTCTCAATCACTTCAACTCCTTTATTTCTCGCCGGCCGACGACCAATCATGGACGTCGATCCTCGTCACTACGACAACATCGTGAGTTCCTTTTTCTCTCAATTTTCGTTATTGAATTCTTTCAACTTTTCCTCTTTAAATTACTGAAACCACTTGCTCATTTCTCTTCTGTTTACTCGCCATTGCTCGATTACTTTGTTTCCCTTTATCTTTTGTCAATTTGTGAAGTTGTAATTAGACCCTGGCCGTTCCTTACGGTATTTCACTTACTTTCATAAACACATTTTTCTGATGGTGTTTCTCTTTATCTCTTTCTTCAGAGGAGGATTAATCGATCAATTGAAATTGCAGTTCGTAGTTCACTTCTCTTCTTGTTGATATTTCTCTGCTTGTTTAAAGAAATCGGATATTGGACAATCATTTTCTGTTTACGTCTGGATAATTTCTATTACGTTAATGCCCAACGTTTTAGTGATGTATTGGTTACTTGTTTACATGGTGATAAATATGGAATTGGATAGACTTCAAAGTATTGTTATTGAGTTCAGATGGCACGAAGTTGGTTGCTTCTATGTGATAAATTCCCTTGTCTGGTTCGTTTTGGGTGTGGAATAATACTTAATTTCTAATTTCATTTTTCCTTGTGGGTTCATCCTTTGAAACTTCATTATAGGTGAATAAGAAATGGATGTTGGTTACCGCCATAGTTTTGACCTGTTTGATTCTTGTTAAATTGTTAATCTTATTAACTTGTCCTTCATTTTAAGGACTTCATTTTTCTCATATTTCGTTACAGGCTGTGAATGATGGTGATATCCAGAACATTGTTCTATCGTACCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTCGTTCACTACCTGTACTGGGCTTAAGCACCACACGGATTATCTTGTTGACATGGCAAAAAGAAAAAGTTGGTGAAATTTCTCTCTTTCTAATTGGGAATTCTGATACTGTTTTTTGTGTGCGAATATAGATCTACATCTAATTGCCAAATTGCCCAACCCTCTCAAATGAACTGAATAATTTAGATTTAGTCGTTTGCCTCTCAGTACATGGACTCTTCTGGTATGAATTGTGATTTATTTTAGAACTCTCTTGTAAGGAATAATGATCTATTTCCACTGTCTTACGTGTCCCCAAGTTGAGGAATAAATTCATGCAAAGGAACGCAGCCTGGACACTGAATTCCATCAAACAATCTGAATGATATGCATTTTATAATATTTGAGCTCTGTGTTAATTTAAATTTGTTTGTGTGCACTACATCTGCTTTTATATTCCCGAAAAATTCAATCCAACTTTCCTTAATCTTTTTGTTCTTTCAGGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAGGCCATTGAGTTAACAGAAGAGGTGGCACCTGGTCTACTTGAGAAGATTGAGGACCTTCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTTTGCTCTAGGAAATGGTGAGCCCCCTGCCATCATCACAATTTTATACCTTCCTTAACCTTAAAACTAGTCTCTGATGGTCAGATGGGGCATTCTGTTTTACAGCTTATAACTTTTGATTCTTATTCTTGTTTGTTTACATGGCAGCACAGAGGCCCTGGAATTTGCTCAGGTCAAGCTTGCTCCTTTTGGGAAGTTGCATAAATATGTGGAAAAACTTGAAGTGCGTAGCTGGTAGCTTGACTTTGATATCCTCCATCTTTTCTGGCATTCTACTCTATTTCCTCATTCCTCTGTTGGGCAGGCTGAACCAGCTTGCATAAATATGTTGAGAAATTTGAAATACTAATCATTATGTCGTTGTAGGATTTCATGGCCCTCCTTGCCTATGAAGAACCAGAGAAGTCTCCAATGTTTCATCTCCTTAGCGTGGATTACCGGCAAAGAGTAGCAGAAAGTCTAAATCGAGCAATTCTTGGTTTGTTCCTTTTTTTCGTTATGTGATTTTACTCTAACCCCCTATATTGTGCCATCAACTCTTGTTCGTGTGGTCTTGGTTGATATTAGCGCATGGAAATTTGCCAAGCTATACAGCAATGGAAAGGCTGATAAAGCAGGTGACTGTAGTTAGACAGTCTTTGAGCCAAGAGCTGGGCAAGGTAAGCTGCACATTCCAAATTCGTTTCCTTTCAGTTTGTAATTAATCAGTGCTTGAGCTAAGAGCTACAAGGCCGGTGCAATTACATGTGTGCATTTATTGTCAATTCTTTCAATGTGCCAGCTATTTCAGTAATGTCAAGAGACGGCCCTGATGAAAATATTGATTTGTAAATCCGCATTATGTTTTCCACTGATGCTAATTGTGCCATACAAGTAATTTTATTCAAGGAACGTTTTTTTTGTCCGAACAAATGATATTTCCAGATTATTCCTTGAACCTAAAATTGGTTATCTTTAGGAAAAGAGACATTGAAGTCAGTAACTGCTTGCTTCAATTACTAGATGTTTTATAAATGATTATTACTCAATATAGACCATTTAGTTGTGCTTGCTGACTAGAGCGATGTTCTTTTGATAATTGAGAATCCTCCATCGGCTTTTCAAAGAGAGGAAGTTTGTTATGCTCGTCGGGGTGAATGCACTATTGTGGGATCTTTGCGTTGGGGGTGGGGGCAAACAATGATGTGTTTAGAGGGGTGAATAAGGTCCCTGGCAAGGTTTGGCCTTCATAGTTTCCTGTTAAGCACTCGAGCACCTTGGAGAACCACTCCCCAAAACCAGCTATGGGAGTGGAGAACCATTTAAGTACTACATTGGTCATCCCATTCTAACCAATGTGGGACAAAGGCGTCCCATATTACCTTACTTTTTAAAAGTTCTATGTCTCTTTTTGGGTTTAATTGTTGAAAACTATATTATTCCTTGGGTAAGGAAGCTCTTTCTCTAGGGTTTTTGCAGGCTTGATCTTTTTAGTTTTTTTGTTTGTTTGTTTAGCAGCCCATGTTAAGATTAAAGAGCGATGTTGGAAACTAATCTTACATATTTGTTTATATCTCTGGATTTCCAGGATGGGTTTCAATCATTTTCTTTGAGGGATTTTCTGAAAAGCTAATCCAAAGAGTTCGTTTAGGCTCACAGCACTGAGATACAACCAGCTCCAAATCTTGTTGCCACCCATGGCTGGGTATGGAAGATTGTTGCTCTCTTCACATGCCTTAGGTGCCGTGTAGGGCCCTAAACTGAGTCATCTAGGTCCCTCGAGCAAAAGTTCGTTTCTTTTCAGTTTGGTGACCTCGTTGTGCCAGTGGCTTGCTTTGTATTGTGATTGTACATGCTGTCTCTAATTTTGCTGCTTGCCCTATTTTCCCCCTTTTCTTTTATTTTTCAAAATTTTAATGTATGGAGACATCGAGATATTGGCTACATTATTTTGTCATAGTCATGGTACGGTTTTGGCACGGAGGAACTATACTTTGTTATTTAAGTATTTTTTTACCAAAAAATCTGCATATCCAATTATATAGTATTGTCTCATGGCTAAAATATGTATGTTCT

Coding sequence (CDS)

ATGATGGTGATATCCAGAACATTGTTCTATCGTACCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTCGTTCACTACCTGTACTGGGCTTAAGCACCACACGGATTATCTTGTTGACATGGCAAAAAGAAAAAGTTGGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAGGCCATTGAGTTAACAGAAGAGGTGGCACCTGGTCTACTTGAGAAGATTGAGGACCTTCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTTTGCTCTAGGAAATGCACAGAGGCCCTGGAATTTGCTCAGGTCAAGCTTGCTCCTTTTGGGAAGTTGCATAAATATGTGGAAAAACTTGAAGATTTCATGGCCCTCCTTGCCTATGAAGAACCAGAGAAGTCTCCAATGTTTCATCTCCTTAGCGTGGATTACCGGCAAAGAGTAGCAGAAAGTCTAAATCGAGCAATTCTTGCGCATGGAAATTTGCCAAGCTATACAGCAATGGAAAGGCTGATAAAGCAGGTGACTGTAGTTAGACAGTCTTTGAGCCAAGAGCTGGGCAAGGATGGGTTTCAATCATTTTCTTTGAGGGATTTTCTGAAAAGCTAA

Protein sequence

MMVISRTLFYRTLFIIVIKKLQSRSLPVLGLSTTRIILLTWQKEKVGIYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS
Homology
[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy Swiss-Prot
Match: Q5ZKQ7 (Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 48/144 (33.33%), Postives = 83/144 (57.64%), Query Frame = 0 

Query: 44  EKVGIYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFA 103
           E++ I +  ++G   +AI L   + P LL+    L+F L   H +EL+  R+   ALEFA
Sbjct: 66  ERIKIREMILKGQIQEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFA 125

Query: 104 QVKLAPFG-KLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGN 163
           Q +LA  G +  + + ++E  +ALLA++ PE+SP   LL++  RQ+V   +N+A+L + N
Sbjct: 126 QTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYEN 185

Query: 164 LPSYTAMERLIKQVTVVRQSLSQE 187
             S   + +L+K +   +  L Q+
Sbjct: 186 RESTPKLAKLLKLLLWAQNELDQK 209

[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy Swiss-Prot
Match: E7FGY2 (Glucose-induced degradation protein 8-B homolog OS=Danio rerio OX=7955 GN=gid8b PE=2 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-14
Identity = 48/144 (33.33%), Postives = 83/144 (57.64%), Query Frame = 0 

Query: 44  EKVGIYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFA 103
           E++ I +  ++G   +AI L   + P LL+    L+F L   H +EL+  R+   ALEFA
Sbjct: 67  ERIKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFA 126

Query: 104 QVKLAPFG-KLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGN 163
           Q +LA  G +  + + ++E  +ALLA++ PE+SP   LL++  RQ+V   +N+A+L + N
Sbjct: 127 QTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYEN 186

Query: 164 LPSYTAMERLIKQVTVVRQSLSQE 187
             S   + +L+K +   +  L Q+
Sbjct: 187 RESTPKLAKLLKLLLWAQNELDQK 210

[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy Swiss-Prot
Match: Q32L52 (Glucose-induced degradation protein 8 homolog OS=Bos taurus OX=9913 GN=GID8 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 48/144 (33.33%), Postives = 82/144 (56.94%), Query Frame = 0 

Query: 44  EKVGIYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFA 103
           E++ I +  ++G   +AI L   + P LL+    L+F L   H +EL+  R+   ALEFA
Sbjct: 66  ERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFA 125

Query: 104 QVKLAPFG-KLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGN 163
           Q +LA  G +  + + ++E  +ALLA++ PE SP   LL++  RQ+V   +N+A+L + N
Sbjct: 126 QTQLAEQGEESRECLTEMERTLALLAFDNPEDSPFGDLLNMMQRQKVWSEVNQAVLDYEN 185

Query: 164 LPSYTAMERLIKQVTVVRQSLSQE 187
             S   + +L+K +   +  L Q+
Sbjct: 186 RESTPKLAKLLKLLLWAQNELDQK 209

[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy Swiss-Prot
Match: Q9D7M1 (Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 48/144 (33.33%), Postives = 82/144 (56.94%), Query Frame = 0 

Query: 44  EKVGIYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFA 103
           E++ I +  ++G   +AI L   + P LL+    L+F L   H +EL+  R+   ALEFA
Sbjct: 66  ERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFA 125

Query: 104 QVKLAPFG-KLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGN 163
           Q +LA  G +  + + ++E  +ALLA++ PE+SP   LL +  RQ+V   +N+A+L + N
Sbjct: 126 QTQLAEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVLDYEN 185

Query: 164 LPSYTAMERLIKQVTVVRQSLSQE 187
             S   + +L+K +   +  L Q+
Sbjct: 186 RESTPKLAKLLKLLLWAQNELDQK 209

[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy Swiss-Prot
Match: Q6PC55 (Glucose-induced degradation protein 8-A homolog OS=Danio rerio OX=7955 GN=gid8a PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 48/144 (33.33%), Postives = 83/144 (57.64%), Query Frame = 0 

Query: 44  EKVGIYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFA 103
           E++ I +  ++G   +AI L   + P LL+    L+F L   H +EL+  R+   ALEFA
Sbjct: 66  ERIKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFA 125

Query: 104 QVKLAPFG-KLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGN 163
           Q +LA  G +  + + ++E  +ALLA++ PE+SP   LL++  RQ+V   +N+A+L + N
Sbjct: 126 QSQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYEN 185

Query: 164 LPSYTAMERLIKQVTVVRQSLSQE 187
             S   + +L+K +   +  L Q+
Sbjct: 186 RESTPKLAKLLKLLLWAQNELDQK 209

[Close]
BLAST of Cucsat.G13427.T19 vs. NCBI nr
Match: KAG7037883.1 (Glucose-induced degradation protein 8-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334 bits (856), Expect = 4.38e-114
Identity = 176/201 (87.56%), Postives = 184/201 (91.54%), Query Frame = 0 

Query: 3   VISRTLFYRTLFIIVIKKLQSRSLPVLGLSTTRIILLTWQKEKVGIYDFAVEGNALKAIE 62
           V+ RTLF R LFIIVIKKLQSRSLP+LGL++  I+LL W+KE VGIYDFAVEGNALKAIE
Sbjct: 17  VMFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIE 76

Query: 63  LTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLED 122
           LTEEVA GLLEK E LHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLED
Sbjct: 77  LTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLED 136

Query: 123 FMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQVTVVRQS 182
            MALLAYEEPEKSPMFHLLS+DYRQRVAE+LNR ILAH NLPSYTAMERLIKQ TVVRQS
Sbjct: 137 SMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQS 196

Query: 183 LSQELGKDGFQSFSLRDFLKS 203
           LSQELGKDG   FSLRDFLKS
Sbjct: 197 LSQELGKDGPSPFSLRDFLKS 217

[Close]
BLAST of Cucsat.G13427.T19 vs. NCBI nr
Match: XP_022940039.1 (glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita moschata] >XP_023525060.1 glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333 bits (854), Expect = 4.88e-114
Identity = 175/198 (88.38%), Postives = 182/198 (91.92%), Query Frame = 0 

Query: 6   RTLFYRTLFIIVIKKLQSRSLPVLGLSTTRIILLTWQKEKVGIYDFAVEGNALKAIELTE 65
           RTLF R LFIIVIKKLQSRSLP+LGL++  I+LL W+KE VGIYDFAVEGNALKAIELTE
Sbjct: 3   RTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIELTE 62

Query: 66  EVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDFMA 125
           EVA GLLEK E LHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLED MA
Sbjct: 63  EVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDSMA 122

Query: 126 LLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQVTVVRQSLSQ 185
           LLAYEEPEKSPMFHLLS+DYRQRVAE+LNR ILAH NLPSYTAMERLIKQ TVVRQSLSQ
Sbjct: 123 LLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSLSQ 182

Query: 186 ELGKDGFQSFSLRDFLKS 203
           ELGKDG   FSLRDFLKS
Sbjct: 183 ELGKDGPSPFSLRDFLKS 200

[Close]
BLAST of Cucsat.G13427.T19 vs. NCBI nr
Match: XP_022981871.1 (glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 331 bits (848), Expect = 4.00e-113
Identity = 174/198 (87.88%), Postives = 181/198 (91.41%), Query Frame = 0 

Query: 6   RTLFYRTLFIIVIKKLQSRSLPVLGLSTTRIILLTWQKEKVGIYDFAVEGNALKAIELTE 65
           RTLF R LFIIVIKKLQSRSLP+L L++  I+LL W+KE VGIYDFAVEGNALKAIELTE
Sbjct: 3   RTLFCRILFIIVIKKLQSRSLPLLSLNSRLIVLLAWRKENVGIYDFAVEGNALKAIELTE 62

Query: 66  EVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDFMA 125
           EVA GLLEK E LHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLED MA
Sbjct: 63  EVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDSMA 122

Query: 126 LLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQVTVVRQSLSQ 185
           LLAYEEPEKSPMFHLLS+DYRQRVAE+LNR ILAH NLPSYTAMERLIKQ TVVRQSLSQ
Sbjct: 123 LLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSLSQ 182

Query: 186 ELGKDGFQSFSLRDFLKS 203
           ELGKDG   FSLRDFLKS
Sbjct: 183 ELGKDGPSPFSLRDFLKS 200

[Close]
BLAST of Cucsat.G13427.T19 vs. NCBI nr
Match: XP_004147845.1 (glucose-induced degradation protein 8 homolog [Cucumis sativus] >KGN60001.1 hypothetical protein Csa_002003 [Cucumis sativus])

HSP 1 Score: 306 bits (784), Expect = 3.77e-103
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 48  IYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL 107
           IYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL
Sbjct: 60  IYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL 119

Query: 108 APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT 167
           APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT
Sbjct: 120 APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT 179

Query: 168 AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 203
           AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS
Sbjct: 180 AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 215

[Close]
BLAST of Cucsat.G13427.T19 vs. NCBI nr
Match: XP_008466517.1 (PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis melo])

HSP 1 Score: 303 bits (777), Expect = 4.39e-102
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0 

Query: 48  IYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL 107
           IYDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKL
Sbjct: 60  IYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL 119

Query: 108 APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT 167
           APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT
Sbjct: 120 APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT 179

Query: 168 AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 203
           AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS
Sbjct: 180 AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 215

[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy TrEMBL
Match: A0A6J1FIX1 (glucose-induced degradation protein 8 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445791 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 2.36e-114
Identity = 175/198 (88.38%), Postives = 182/198 (91.92%), Query Frame = 0 

Query: 6   RTLFYRTLFIIVIKKLQSRSLPVLGLSTTRIILLTWQKEKVGIYDFAVEGNALKAIELTE 65
           RTLF R LFIIVIKKLQSRSLP+LGL++  I+LL W+KE VGIYDFAVEGNALKAIELTE
Sbjct: 3   RTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIELTE 62

Query: 66  EVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDFMA 125
           EVA GLLEK E LHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLED MA
Sbjct: 63  EVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDSMA 122

Query: 126 LLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQVTVVRQSLSQ 185
           LLAYEEPEKSPMFHLLS+DYRQRVAE+LNR ILAH NLPSYTAMERLIKQ TVVRQSLSQ
Sbjct: 123 LLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSLSQ 182

Query: 186 ELGKDGFQSFSLRDFLKS 203
           ELGKDG   FSLRDFLKS
Sbjct: 183 ELGKDGPSPFSLRDFLKS 200

[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy TrEMBL
Match: A0A6J1IXR7 (glucose-induced degradation protein 8 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480883 PE=4 SV=1)

HSP 1 Score: 331 bits (848), Expect = 1.94e-113
Identity = 174/198 (87.88%), Postives = 181/198 (91.41%), Query Frame = 0 

Query: 6   RTLFYRTLFIIVIKKLQSRSLPVLGLSTTRIILLTWQKEKVGIYDFAVEGNALKAIELTE 65
           RTLF R LFIIVIKKLQSRSLP+L L++  I+LL W+KE VGIYDFAVEGNALKAIELTE
Sbjct: 3   RTLFCRILFIIVIKKLQSRSLPLLSLNSRLIVLLAWRKENVGIYDFAVEGNALKAIELTE 62

Query: 66  EVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDFMA 125
           EVA GLLEK E LHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLED MA
Sbjct: 63  EVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDSMA 122

Query: 126 LLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQVTVVRQSLSQ 185
           LLAYEEPEKSPMFHLLS+DYRQRVAE+LNR ILAH NLPSYTAMERLIKQ TVVRQSLSQ
Sbjct: 123 LLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSLSQ 182

Query: 186 ELGKDGFQSFSLRDFLKS 203
           ELGKDG   FSLRDFLKS
Sbjct: 183 ELGKDGPSPFSLRDFLKS 200

[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy TrEMBL
Match: A0A0A0LJ37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G865360 PE=4 SV=1)

HSP 1 Score: 306 bits (784), Expect = 1.83e-103
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 48  IYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL 107
           IYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL
Sbjct: 60  IYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL 119

Query: 108 APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT 167
           APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT
Sbjct: 120 APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT 179

Query: 168 AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 203
           AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS
Sbjct: 180 AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 215

[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy TrEMBL
Match: A0A1S3CRF7 (glucose-induced degradation protein 8 homolog OS=Cucumis melo OX=3656 GN=LOC103503906 PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 2.13e-102
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0 

Query: 48  IYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL 107
           IYDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKL
Sbjct: 60  IYDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL 119

Query: 108 APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT 167
           APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT
Sbjct: 120 APFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYT 179

Query: 168 AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 203
           AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS
Sbjct: 180 AMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 215

[Close]
BLAST of Cucsat.G13427.T19 vs. ExPASy TrEMBL
Match: A0A6J1BQR5 (glucose-induced degradation protein 8 homolog OS=Momordica charantia OX=3673 GN=LOC111004860 PE=4 SV=1)

HSP 1 Score: 288 bits (736), Expect = 3.70e-96
Identity = 151/174 (86.78%), Postives = 156/174 (89.66%), Query Frame = 0 

Query: 30  GLSTTRIILLTWQKEKVGIYDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVE 89
           GL      L+  +K K  IYDFA+EGNALKAIELTEE+A GLLEK EDLHFDLLSLHFVE
Sbjct: 43  GLKQHTDYLVDMEKRK-RIYDFAIEGNALKAIELTEEIAHGLLEKNEDLHFDLLSLHFVE 102

Query: 90  LVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRV 149
           LVCSRKCTEALEFAQVKLAPFGK+HKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRV
Sbjct: 103 LVCSRKCTEALEFAQVKLAPFGKVHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRV 162

Query: 150 AESLNRAILAHGNLPSYTAMERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 203
           AESLNRAILAH N PSYTAMERLIKQ TVVRQSLSQELGKDG Q FSLRDFLKS
Sbjct: 163 AESLNRAILAHANFPSYTAMERLIKQATVVRQSLSQELGKDGPQPFSLRDFLKS 215

The following BLAST results are available for this feature:
BLAST of Cucsat.G13427.T19 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5ZKQ71.1e-1433.33Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 P... [more]
E7FGY21.9e-1433.33Glucose-induced degradation protein 8-B homolog OS=Danio rerio OX=7955 GN=gid8b ... [more]
Q32L522.4e-1433.33Glucose-induced degradation protein 8 homolog OS=Bos taurus OX=9913 GN=GID8 PE=2... [more]
Q9D7M12.4e-1433.33Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 P... [more]
Q6PC553.2e-1433.33Glucose-induced degradation protein 8-A homolog OS=Danio rerio OX=7955 GN=gid8a ... [more]
BLAST of Cucsat.G13427.T19 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7037883.14.38e-11487.56Glucose-induced degradation protein 8-like protein, partial [Cucurbita argyrospe... [more]
XP_022940039.14.88e-11488.38glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita moschata] >X... [more]
XP_022981871.14.00e-11387.88glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita maxima][more]
XP_004147845.13.77e-103100.00glucose-induced degradation protein 8 homolog [Cucumis sativus] >KGN60001.1 hypo... [more]
XP_008466517.14.39e-10299.36PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis melo][more]
BLAST of Cucsat.G13427.T19 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FIX12.36e-11488.38glucose-induced degradation protein 8 homolog isoform X2 OS=Cucurbita moschata O... [more]
A0A6J1IXR71.94e-11387.88glucose-induced degradation protein 8 homolog isoform X2 OS=Cucurbita maxima OX=... [more]
A0A0A0LJ371.83e-103100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G865360 PE=4 SV=1[more]
A0A1S3CRF72.13e-10299.36glucose-induced degradation protein 8 homolog OS=Cucumis melo OX=3656 GN=LOC1035... [more]
A0A6J1BQR53.70e-9686.78glucose-induced degradation protein 8 homolog OS=Momordica charantia OX=3673 GN=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013144CRA domainSMARTSM00757toby_final6coord: 94..189
e-value: 3.9E-28
score: 109.5
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 53..183
e-value: 6.1E-27
score: 94.4
NoneNo IPR availablePANTHERPTHR12864:SF21VACUOLAR IMPORT AND DEGRADATION PROTEIN 30coord: 44..202
NoneNo IPR availablePANTHERPTHR12864RAN BINDING PROTEIN 9-RELATEDcoord: 44..202
IPR006595CTLH, C-terminal LisH motifPROSITEPS50897CTLHcoord: 54..98
score: 9.924997

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G13427Cucsat.G13427gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13427.T19.E1Cucsat.G13427.T19.E1exon
Cucsat.G13427.T19.E2Cucsat.G13427.T19.E2exon
Cucsat.G13427.T19.E3Cucsat.G13427.T19.E3exon
Cucsat.G13427.T19.E4Cucsat.G13427.T19.E4exon
Cucsat.G13427.T19.E5Cucsat.G13427.T19.E5exon
Cucsat.G13427.T19.E6Cucsat.G13427.T19.E6exon
Cucsat.G13427.T19.E7Cucsat.G13427.T19.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13427.T19.C1Cucsat.G13427.T19.C1CDS
Cucsat.G13427.T19.C2Cucsat.G13427.T19.C2CDS
Cucsat.G13427.T19.C3Cucsat.G13427.T19.C3CDS
Cucsat.G13427.T19.C4Cucsat.G13427.T19.C4CDS
Cucsat.G13427.T19.C5Cucsat.G13427.T19.C5CDS
Cucsat.G13427.T19.C6Cucsat.G13427.T19.C6CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G13427.T19Cucsat.G13427.T19-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008233 peptidase activity
molecular_function GO:0005515 protein binding