Cucsat.G13427 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13427
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Lon N-terminal domain-containing protein
Location	ctg1838: 6512300 .. 6516051 (+)
RNA-Seq Expression	Cucsat.G13427
Synteny	Cucsat.G13427

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAGAAAAGAAGAAAAGAAGAAAAGAGATAGAGAGAAGTAAATAAATATTTTTAATTTCTGGGAGAGTTTTTGATATTTTTTTATTTTGTGAGGTAGAGAGCTCAGAACACAGTCTCTCTAACAAACAAGCAAACAATTTTGCTTCTCCTTTATCTATAACACTTTTTATTTTTGTGAGAACACTGGCACCTTTTCAATGGCTCTCCCTCAGCTCATTCCTTCTTCTTCCTCTTCCTCTTTATCCCATAAACCCATTTTAAACCCCAACTCCATTTCCTCTTCCTTAATTCCTAGCCCTAGATTCTTCTCTCCCGCCTCCTCCTCCTCCGCCGCCTCCCTTTTTCGCCACCGCCACCACAAACCTAATTCTCTCAAGTGTTCTGCTTCCTCTTTCCCCGAAAAACATCACACCGGCTCTCCTAAGTCAGACGATGTTGTTGAGCTTCCGCTTTTTCCCCTTCCTCTCGTTCTCTTCCCTGGCGCTATTCTTCCTCTGCAGATCTTTGAGTTTCGTTACAGGATGATGATGCACACTGTACTCCAAACCGATCTTCGCTTTGGAGTTATTTACACTGATCCAGTTTCCGGTACCACGGATGTCGGATGTGTTGGTGAGATTGTTAAACATGAGCGACTCGTTGACGATCGATTCTTCCTTATTTGTAAAGGCCAAGAGCGGTTTCGAGTCACTAATCTTGTTCGGACGAAACCGTATCTTGTTGCTGAAGTTACATGGCTTGAGGACCGGCCATCCGGGAATGGTGAAGAGGATTTGGATACGTTGGCGAATGAGGTAGAATCGTACATGAAGGACGTGATTCGATTGTCGAATAAGTTGAGTGGTAAGCCAGAGAAAGAGGTTCAGGATTTGAGAAGGAATTTATTCCCAACTCCTTTCTCGTTTTTCGTTGGAAGCACGTTTGAAGGGGCGCCGAGAGAACAACAAGCGTTGCTTGAATTGGAGGATACGGCGGCGAGGTTGAAAAGGGAGAAAGAGACATTGAGAAACACTCTTAATTACTTGACCGCTGCTTCTGCTGTTAAAGATGTATTTCCTTCGAACAGTTGAAAGGCAAGTTTGAGAGGTTTCTATGGAAATTCCAAACAGATTGAGCTAGATCGTTGAAGCCTAAAGAAGCAAATTGAAGGTAATGCTTAAGTTTTGCTTGCCTTTACAAGTACTTTATACAAGGGATGGATGTTATTAAAGCTGTAAATTTTGATATATAATTGAATTTGCTTCATCTGGTGTACCGATGCTTACATACTTGATATAGAAATTGCACATGATCTGAAGGTTTTAGGTGGATTACTTGTGTTCTTGGCTTTCATTCTTTCTTGTCAAATCAGATTTTGGTTGCACTTGGAAATTTATCTAGAGTTTTATGACTTTCAAAGTTATCTAGAATCTAGAGATGTTCACATTTAGGATCAGAGTCAGATATTTGTCTTTGATTGTATGGAATCATTTCCTGTACCTGTTAGCTCTTGTGGGTAATGCCAAGGTGGAGGGAAATAGCAGTACATTGTGTTGGAACATTGGATGGTTAAATTTCTTTATGTTCTGTTTTGTGATGATGGGTATTGTTCTATTAGTTCATTCACTGATTCCCATTGCAATTTAGCCCTACACAACTAGTTTGCTCCTTTAGACCTCAACCTACATCCATCTTCTAAACTACCACAACTTGCTTTGCACTAACCCCCATGAGTTTTGAAGGAAGTTCACAAGATCTTGAATTTGATATGTGCTTCAATTAGATTATTATTATCGAGGTCGTGGAGGTGGGGGACGAATCTGTTTGGTTTTGCAGTCGAATGTATGGTGTATGGTGAAATTCTTGACTTCACCATGACTTCCTCGTATAAGCCCTAAAGGTTGTACAGTATCATTTCCTCAAAGGTTTAGGGCAATACGAGGATTTGTTTCATAATCACGTGGTCTGTTCCGTTCATTTTTTGGTTATGACAGGAAAAGCAACTTCAGGCAAGAACATAAAAACTTAGAGTTGATTG

Coding sequence (CDS)

ATGGCTCTCCCTCAGCTCATTCCTTCTTCTTCCTCTTCCTCTTTATCCCATAAACCCATTTTAAACCCCAACTCCATTTCCTCTTCCTTAATTCCTAGCCCTAGATTCTTCTCTCCCGCCTCCTCCTCCTCCGCCGCCTCCCTTTTTCGCCACCGCCACCACAAACCTAATTCTCTCAAGTGTTCTGCTTCCTCTTTCCCCGAAAAACATCACACCGGCTCTCCTAAGTCAGACGATGTTGTTGAGCTTCCGCTTTTTCCCCTTCCTCTCGTTCTCTTCCCTGGCGCTATTCTTCCTCTGCAGATCTTTGAGTTTCGTTACAGGATGATGATGCACACTGTACTCCAAACCGATCTTCGCTTTGGAGTTATTTACACTGATCCAGTTTCCGGTACCACGGATGTCGGATGTGTTGGTGAGATTGTTAAACATGAGCGACTCGTTGACGATCGATTCTTCCTTATTTGTAAAGGCCAAGAGCGGTTTCGAGTCACTAATCTTGTTCGGACGAAACCGTATCTTGTTGCTGAAGTTACATGGCTTGAGGACCGGCCATCCGGGAATGGTGAAGAGGATTTGGATACGTTGGCGAATGAGGTAGAATCGTACATGAAGGACGTGATTCGATTGTCGAATAAGTTGAGTGGTAAGCCAGAGAAAGAGGTTCAGGATTTGAGAAGGAATTTATTCCCAACTCCTTTCTCGTTTTTCGTTGGAAGCACGTTTGAAGGGGCGCCGAGAGAACAACAAGCGTTGCTTGAATTGGAGGATACGGCGGCGAGGTTGAAAAGGGAGAAAGAGACATTGAGAAACACTCTTAATTACTTGACCGCTGCTTCTGCTGTTAAAGATGTATTTCCTTCGAACAGTTGA

Protein sequence

MALPQLIPSSSSSSLSHKPILNPNSISSSLIPSPRFFSPASSSSAASLFRHRHHKPNSLKCSASSFPEKHHTGSPKSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRMMMHTVLQTDLRFGVIYTDPVSGTTDVGCVGEIVKHERLVDDRFFLICKGQERFRVTNLVRTKPYLVAEVTWLEDRPSGNGEEDLDTLANEVESYMKDVIRLSNKLSGKPEKEVQDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLKREKETLRNTLNYLTAASAVKDVFPSNS

Homology

[Close]

BLAST of Cucsat.G13427 vs. ExPASy Swiss-Prot
Match: Q84WK5 (Protein GID8 homolog OS=Arabidopsis thaliana OX=3702 GN=GID8 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-09
Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 17  DIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRIYDFAVEGNALKAIELT 76
           D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN   AIE  
Sbjct: 43  DMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQNGNVEDAIEKV 102

Query: 77  EEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHK-YVEKLE 134
            ++ P +L+   +L F L     +EL+   K  EALEFAQ +LAP G+ ++ ++E+LE
Sbjct: 103 NDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELE 159

[Close]

BLAST of Cucsat.G13427 vs. ExPASy Swiss-Prot
Match: Q54X16 (Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0279265 PE=3 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-08
Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 11  IAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRIYDFAVEGNAL 70
           + ++  D+  +V++YLV   Y+E A  F   +  +   D L  +A R  I      G+  
Sbjct: 26  VNISKSDLNKLVMNYLVIEGYQEAAAKFQEESSTQTTVD-LASIADRMAIRSAIQCGDVE 85

Query: 71  KAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFG-KLHKYV 130
           K IE+  ++ P +L+    L+F L     +EL+      EAL+FAQ +LAP G + +K++
Sbjct: 86  KGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAEALKFAQDELAPQGEENNKFL 145

Query: 131 EKLE 134
           E+LE
Sbjct: 146 EELE 148

[Close]

BLAST of Cucsat.G13427 vs. ExPASy Swiss-Prot
Match: A1L252 (Ran-binding protein 9 OS=Danio rerio OX=7955 GN=ranbp9 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.7e-08
Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 18  IQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRIYDFAVEGNALKAIELTE 77
           IQ +V SYLVH+ Y  TAE+F   T    H + L  +  R++I    + G   +AIE T+
Sbjct: 251 IQKMVASYLVHHSYCATAEAFAKSTDQAVHEE-LASIKNRQKIQKLVLSGRMGEAIETTQ 310

Query: 78  EVAPGLLEKIEDLHFDLLSLHFVELV 104
           ++ P LLE+  DL F L    F+E+V
Sbjct: 311 QLYPSLLERNPDLLFMLKVRQFIEMV 335

[Close]

BLAST of Cucsat.G13427 vs. ExPASy Swiss-Prot
Match: Q9PTY5 (Ran-binding protein 9 OS=Xenopus laevis OX=8355 GN=ranbp9 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.6e-07
Identity = 33/86 (38.37%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 18  IQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRIYDFAVEGNALKAIELTE 77
           IQ +V SYLVH+ Y  TAE+F   T  +   + L  +  R+RI    + G   +AIE T+
Sbjct: 221 IQRMVSSYLVHHGYCSTAEAFAKSTD-QTVQEELASIKNRQRIQKLVLSGRMGEAIETTQ 280

Query: 78  EVAPGLLEKIEDLHFDLLSLHFVELV 104
           ++ P LLE+  +L F L    F+E+V
Sbjct: 281 QLYPSLLERNPNLLFTLKVRQFIEMV 305

[Close]

BLAST of Cucsat.G13427 vs. ExPASy Swiss-Prot
Match: Q28FM1 (Ran-binding protein 9 OS=Xenopus tropicalis OX=8364 GN=ranbp9 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.6e-07
Identity = 33/86 (38.37%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 18  IQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRIYDFAVEGNALKAIELTE 77
           IQ +V SYLVH+ Y  TAE+F   T  +   + L  +  R+RI    + G   +AIE T+
Sbjct: 221 IQRMVSSYLVHHGYCSTAEAFAKSTD-QTVQEELASIKNRQRIQKLVLSGRMGEAIETTQ 280

Query: 78  EVAPGLLEKIEDLHFDLLSLHFVELV 104
           ++ P LLE+  +L F L    F+E+V
Sbjct: 281 QLYPSLLERNPNLLFTLKVRQFIEMV 305

[Close]

BLAST of Cucsat.G13427 vs. NCBI nr
Match: XP_004147845.1 (glucose-induced degradation protein 8 homolog [Cucumis sativus] >KGN60001.1 hypothetical protein Csa_002003 [Cucumis sativus])

HSP 1 Score: 274 bits (700), Expect = 1.63e-91
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGKLHKYVEKLE
Sbjct: 121 PFGKLHKYVEKLE 133

[Close]

BLAST of Cucsat.G13427 vs. NCBI nr
Match: XP_008466517.1 (PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis melo])

HSP 1 Score: 268 bits (685), Expect = 3.14e-89
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLK HTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGKLHKYVEKLE
Sbjct: 121 PFGKLHKYVEKLE 133

[Close]

BLAST of Cucsat.G13427 vs. NCBI nr
Match: KAA0063230.1 (glucose-induced degradation protein 8-like protein [Cucumis melo var. makuwa] >TYK13480.1 glucose-induced degradation protein 8-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 268 bits (685), Expect = 2.81e-88
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLK HTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGKLHKYVEKLE
Sbjct: 121 PFGKLHKYVEKLE 133

[Close]

BLAST of Cucsat.G13427 vs. NCBI nr
Match: XP_038897027.1 (glucose-induced degradation protein 8 homolog [Benincasa hispida])

HSP 1 Score: 263 bits (672), Expect = 3.00e-87
Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYD+IAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLK HTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDHIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVA GLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVADGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGKLHKYVEKLE
Sbjct: 121 PFGKLHKYVEKLE 133

[Close]

BLAST of Cucsat.G13427 vs. NCBI nr
Match: XP_022131820.1 (glucose-induced degradation protein 8 homolog [Momordica charantia])

HSP 1 Score: 252 bits (643), Expect = 7.79e-83
Identity = 121/133 (90.98%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYD+ A++DGDIQNIVLSYLVHNCYKETAESFT CTGLK HTDYLVDM KRKRI
Sbjct: 1   MDVDPRHYDHRAISDGDIQNIVLSYLVHNCYKETAESFTNCTGLKQHTDYLVDMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFA+EGNALKAIELTEE+A GLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAIEGNALKAIELTEEIAHGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGK+HKYVEKLE
Sbjct: 121 PFGKVHKYVEKLE 133

[Close]

BLAST of Cucsat.G13427 vs. ExPASy TrEMBL
Match: A0A0A0LJ37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G865360 PE=4 SV=1)

HSP 1 Score: 274 bits (700), Expect = 7.89e-92
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGKLHKYVEKLE
Sbjct: 121 PFGKLHKYVEKLE 133

[Close]

BLAST of Cucsat.G13427 vs. ExPASy TrEMBL
Match: A0A1S3CRF7 (glucose-induced degradation protein 8 homolog OS=Cucumis melo OX=3656 GN=LOC103503906 PE=4 SV=1)

HSP 1 Score: 268 bits (685), Expect = 1.52e-89
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLK HTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGKLHKYVEKLE
Sbjct: 121 PFGKLHKYVEKLE 133

[Close]

BLAST of Cucsat.G13427 vs. ExPASy TrEMBL
Match: A0A5A7V7L0 (Glucose-induced degradation protein 8-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00130 PE=4 SV=1)

HSP 1 Score: 268 bits (685), Expect = 1.36e-88
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLK HTDYLVDMAKRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVAPGLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGKLHKYVEKLE
Sbjct: 121 PFGKLHKYVEKLE 133

[Close]

BLAST of Cucsat.G13427 vs. ExPASy TrEMBL
Match: A0A6J1BQR5 (glucose-induced degradation protein 8 homolog OS=Momordica charantia OX=3673 GN=LOC111004860 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 3.77e-83
Identity = 121/133 (90.98%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYD+ A++DGDIQNIVLSYLVHNCYKETAESFT CTGLK HTDYLVDM KRKRI
Sbjct: 1   MDVDPRHYDHRAISDGDIQNIVLSYLVHNCYKETAESFTNCTGLKQHTDYLVDMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFA+EGNALKAIELTEE+A GLLEK EDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAIEGNALKAIELTEEIAHGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGK+HKYVEKLE
Sbjct: 121 PFGKVHKYVEKLE 133

[Close]

BLAST of Cucsat.G13427 vs. ExPASy TrEMBL
Match: A0A6J1FII7 (glucose-induced degradation protein 8 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445791 PE=4 SV=1)

HSP 1 Score: 241 bits (615), Expect = 6.89e-79
Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60
           MDVDPRHYD+IA+NDGD+QNIVLSYLVHNCYKETAESFT  TGLK  TD +V M KRKRI
Sbjct: 1   MDVDPRHYDHIAINDGDVQNIVLSYLVHNCYKETAESFTASTGLKQQTDCVVGMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120
           YDFAVEGNALKAIELTEEVA GLLEK E LHFDLLSLHFVELVCSRKCTEALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLE 133
           PFGKLHKYVEKLE
Sbjct: 121 PFGKLHKYVEKLE 133

The following BLAST results are available for this feature:

BLAST of Cucsat.G13427 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WK5	2.1e-09	34.75	Protein GID8 homolog OS=Arabidopsis thaliana OX=3702 GN=GID8 PE=1 SV=1	[more]
Q54X16	2.3e-08	31.45	Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum OX=446...	[more]
A1L252	6.7e-08	39.53	Ran-binding protein 9 OS=Danio rerio OX=7955 GN=ranbp9 PE=2 SV=1	[more]
Q9PTY5	9.6e-07	38.37	Ran-binding protein 9 OS=Xenopus laevis OX=8355 GN=ranbp9 PE=2 SV=1	[more]
Q28FM1	9.6e-07	38.37	Ran-binding protein 9 OS=Xenopus tropicalis OX=8364 GN=ranbp9 PE=2 SV=1	[more]

BLAST of Cucsat.G13427 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147845.1	1.63e-91	100.00	glucose-induced degradation protein 8 homolog [Cucumis sativus] >KGN60001.1 hypo...	[more]
XP_008466517.1	3.14e-89	98.50	PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis melo]	[more]
KAA0063230.1	2.81e-88	98.50	glucose-induced degradation protein 8-like protein [Cucumis melo var. makuwa] >T...	[more]
XP_038897027.1	3.00e-87	96.99	glucose-induced degradation protein 8 homolog [Benincasa hispida]	[more]
XP_022131820.1	7.79e-83	90.98	glucose-induced degradation protein 8 homolog [Momordica charantia]	[more]

BLAST of Cucsat.G13427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ37	7.89e-92	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G865360 PE=4 SV=1	[more]
A0A1S3CRF7	1.52e-89	98.50	glucose-induced degradation protein 8 homolog OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A5A7V7L0	1.36e-88	98.50	Glucose-induced degradation protein 8-like protein OS=Cucumis melo var. makuwa O...	[more]
A0A6J1BQR5	3.77e-83	90.98	glucose-induced degradation protein 8 homolog OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1FII7	6.89e-79	89.47	glucose-induced degradation protein 8 homolog isoform X1 OS=Cucurbita moschata O...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006595	CTLH, C-terminal LisH motif	SMART	SM00668	ctlh	coord: 53..110 e-value: 2.9E-5 score: 33.5
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 53..110 score: 10.079433
IPR013144	CRA domain	SMART	SM00757	toby_final6	coord: 106..201 e-value: 3.9E-28 score: 109.5
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 54..195 e-value: 2.0E-28 score: 99.2
None	No IPR available	PANTHER	PTHR12864	RAN BINDING PROTEIN 9-RELATED	coord: 7..214
None	No IPR available	PANTHER	PTHR12864:SF21	VACUOLAR IMPORT AND DEGRADATION PROTEIN 30	coord: 7..214
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 14..46 score: 8.420386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13427.T31	Cucsat.G13427.T31	mRNA
Cucsat.G13427.T16	Cucsat.G13427.T16	mRNA
Cucsat.G13427.T25	Cucsat.G13427.T25	mRNA
Cucsat.G13427.T27	Cucsat.G13427.T27	mRNA
Cucsat.G13427.T1	Cucsat.G13427.T1	mRNA
Cucsat.G13427.T2	Cucsat.G13427.T2	mRNA
Cucsat.G13427.T10	Cucsat.G13427.T10	mRNA
Cucsat.G13427.T12	Cucsat.G13427.T12	mRNA
Cucsat.G13427.T14	Cucsat.G13427.T14	mRNA
Cucsat.G13427.T19	Cucsat.G13427.T19	mRNA
Cucsat.G13427.T18	Cucsat.G13427.T18	mRNA
Cucsat.G13427.T30	Cucsat.G13427.T30	mRNA
Cucsat.G13427.T28	Cucsat.G13427.T28	mRNA
Cucsat.G13427.T29	Cucsat.G13427.T29	mRNA
Cucsat.G13427.T20	Cucsat.G13427.T20	mRNA
Cucsat.G13427.T21	Cucsat.G13427.T21	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0005515	protein binding