Cucsat.G13260.T6 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G13260.T6
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionmitochondrial outer membrane protein porin of 34 kDa
Locationctg1838: 3349862 .. 3353204 (+)
RNA-Seq ExpressionCucsat.G13260.T6
SyntenyCucsat.G13260.T6
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGATCCAACGGTCAGAAAAGAACGTAAAGGGAAAAAAAAAAAAGAAAAAAAAAGAAAAAGAAAGAAAAAAAAGGGGGCTGAAGTTAGGGTTTGAAAGGTGTATATGAAAGCCACCGAGTCATCCACTCATTTCCAGCTGCTTTGGGGAAGAGGACTATCGTTTCCCTTTCAGAATTTCCATTTCATTTCATTCTTCTCTTGAATCTTTCATTTTTCGTTACAAAAATCATGGGAAAGGGTCCTGGTCTCTACTCTGATATCGGCAAGAGAGCTAGAGGTTATTCATTTCTTCTTTCCATTCCCCCCCTTGTAATATGGTCTTGAATCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTGTTGGTTTTTCTCTTTAATCTTTTTTTATTTTGCTGTTTTCTTTGCCAGATCTTCTTTACAAAGACTACCAGAGCGACCACAAGTTCACCATCACCACCTACTCCCCCACTGGAGTTGTGAGTTCCTCTTGACACTCTCTTTACTTTCTAGATCTGTTTTGGGGTCCTACTTTCATCGGGGGATATAATTTACACTGGTGAATGAATCTTAAAGAACACAAAAGAAAGAAAGAAAAAACAAGTGCAAATAAGCTTCTTTATGAGTTTTTTACTTTCTTTTTATTGTTTAACGGATTGCAATTATTATTTTCCTTTTTTTTTTTTGTTCATTGATTATGAAGGGAGCCTGCTCTTATATGTTTCTGATTTGGATTGGATTTTTGCTTTTTTGGAGTTAATGATTATAGGGTTTTTTTCCTTTTATTTCAATGGTCATTGACAAATGCACTGGCATTATCACTCGACACTCACTTTATGAAGTATATTTGTTTCCTTTTCAACTCAATATGCTCCATGTAGTAGAAATTCTTACTGTCCTAATATCTGGGTCGTGTTAATGACTCCAGGATGCATGGTGTGGTTATTTTGCCTTTTATCATATTGCATGCACTGGTTATTATCGATAGTGATTCACGATTCTTTTGCACCGAATGTGTGTTTAATCTAAACCAGTGCATGTTAATATCAGTTGTGGTTGCTTACTGGGGATGCTATGTATTTTGTAAGAAACATATATAATGCTTATCCTCTATTATTACAAGCTTTTGCTTATTATTTATTTATATTTTTCTATCTCCAGGCTATTACATCTTCAGGAACGAAGAAGGGTGACCTGTTTCTTGCTGATGTTAATACTCAGCTGAAGAACAAAAATATCACAACTGATATTAAAGTCGACACAAGCTCCAATGTAAACCATTTTTCTTCTTTCTGCTTTATCATATCCCTCTGCTTTAGATTTAAGTATCGTACTTGCCTTCTCTTTGTCCCTCTTTCTCCATTACTTGTTGCATGGATTTTCTAAATTTATTTATATTCCTTTTAATTCCATAGACATTTTCCATTAGCAGGTCAGAAATTTAAAAGCTTTAGTTGGTGTAGTATCATTGTTGTTTCAACTTATCTAGTCAATTCCTTTGTACTTTTGTGGAGCTGAAGTGAGTGTTTATCAGGCGTCTTTATTGTAAAGCTAGATTCCATTGTCCAGTTAATCTCTTTGTACTTTTGTGGAGCTGAATAGAAAATCACCATTTTCTATCGGTTTGTTTTGATGTGAAAAGCAGCAAGCCTGCCTATCACCGTAGCTCATGATCATTTGACAATCTGAGTGAAGCTATGATGGTTCTCTATTTTGTTTGAGGCAGTTCTTTTCTGAATATATAATGATTTGTTTTTTGAGACTGTAAGCTATGGGGCTCCTGTTGTTTCTCCCATCCCCATCCGCGCATGCACAAATTGATGAAACTTTGAATTTTAAATTAAGGATAGGTTGTGGAAGTTGTACGTTTTTTGAGACTGGTATTTGGTGGGGAAGTTGCACGTTTCTTCTTATTCTTTTTATCATATTTCTTCTTATGCAATTGTTGTGACTTCTGTTCTGTAATTTTGTAGCTTGTGACAACTATCACTGTGGATGAACCTGCTCCTGGATTGAAGGCAATTTTTAGTTTCAAAGTCCCGGATCAAAGGTCTGGTAAGGTGAGTGATGGAACAATGTGTTTTCAGTCTCAGTATATCGTGTTCTTTTATTTTTACTTTTTATGGAGCTGTGCATTTCCTTTTTACTTTTTGTGCTGACCAATCAGGCTACAATAGTTATAAAACAGGTAGATATAATCAGCCTAATTGATTTCTGTTTTTGTCAAGTAGGTGGAACTGCAATATCTCCATGATTATGCAGGAATCAGCACGAGTATTGGGTTGACAGCCAATCCTATTGTCAACTTTTCTGGTGTTGTTGGGTCAAATCTTCTTGCCCTTGGTACCGATCTTTCATTTGATACCAAAACTGGAAACTTCACAAAAGTCAATACTGGACTGAGCTTTGCCAACGCTGACCTAATTGCATCTCTGACCTTGTGAGTTTTTTATTTAGTCAGACTCTTCATTTACGCCTATAGTGTGCTCCTTTTCCTTTTTGGTACTTATTAAGGCGAATAATTAATGTTCAGGAATGACAAGGGTGATACGTTGAGTGCATCCTACTACCATACAGTGAACCCTTTGACAAGCACCGCTGTTGGTGCGGAGGTTGCTCATAGCTTTTCCTCCAACGAGAACACCATCACGGTTGGCACCCAACATGCACTTGATCCACTGACCTCAGTGAAGGCTCGGGTGAACAATTTTGGAAAGGCAAGTGCTCTTATCCAGCATGAGTGGCGTCCAAAATCATTCTTCACTGTATCTGGTGAGGTAGACACGAAAGCAATTGAGAAGAGCGCAAAAGTTGGGCTAGCTTTGGCCTTGAAGCCATGATAGGAAATTTTAGTCACTAGTTTGCTATGGCTGGAAGAATTAAGGGTAGGGCTTCTGGTACATAGCCGGACTTGTTTGTTCAGACTTTGAGATGATGTGTTGATGTCACTCTTGCCAGTTGTTTTGGGTTGTCGAAATAAATGTTAAAGTTGATGGTGTCATTAAGCAGACCACTTTGGTTGGTGTACCCTCCCCTTTTTTTGCACTCTGATCAGTCCCTTTCCAAACTGAGGCCAATGAAAACTTGTTGAGAAGATTTACCATTGAGATGTTGTTTCTATTTACTTTTCGTTTTCCTTCTTTTAACCACTCCCACCCCCACCCCCCAAAGAGAAAAAAAAAGGGATAATCTTCAGCCCCAATTATACTGTTTTGGTGATAATATGTATATTTGATCGTCTGAGGGCTTTTTTTAGTGCAGGTTGTAAACTCACGACAGAAAATTGTCCAAAAGAACAAAAAACTCAAACTTTTATCTAAGACTTATTTTTTAACATGC

Coding sequence (CDS)

ATGGGAAAGGGTCCTGGTCTCTACTCTGATATCGGCAAGAGAGCTAGAGATCTTCTTTACAAAGACTACCAGAGCGACCACAAGTTCACCATCACCACCTACTCCCCCACTGGAGTTGCTATTACATCTTCAGGAACGAAGAAGGGTGACCTGTTTCTTGCTGATGTTAATACTCAGCTGAAGAACAAAAATATCACAACTGATATTAAAGTCGACACAAGCTCCAATCTTGTGACAACTATCACTGTGGATGAACCTGCTCCTGGATTGAAGGCAATTTTTAGTTTCAAAGTCCCGGATCAAAGGTCTGGTAAGGTGGAACTGCAATATCTCCATGATTATGCAGGAATCAGCACGAGTATTGGGTTGACAGCCAATCCTATTGTCAACTTTTCTGGTGTTGTTGGGTCAAATCTTCTTGCCCTTGGTACCGATCTTTCATTTGATACCAAAACTGGAAACTTCACAAAAGTCAATACTGGACTGAGCTTTGCCAACGCTGACCTAATTGCATCTCTGACCTTGTGA

Protein sequence

MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLKNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTSIGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL
Homology
[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy Swiss-Prot
Match: P42055 (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 303.5 bits (776), Expect = 1.5e-81
Identity = 148/175 (84.57%), Postives = 165/175 (94.29%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLY++IGK+ARDLLYKDYQSDHKF+ITTYSPTGV ITSSG+KKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKN+TTDIKVDT+SNL TTITVDE APGLK I SF+VPDQRSGK+E+QYLHDYAGI TS
Sbjct: 61  KNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 176
           +GLTANPIVNFSGVVG+N++ALGTD+SFDTKTG+FTK N GLSF NADL+ASL L
Sbjct: 121 VGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy Swiss-Prot
Match: P42056 (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 289.3 bits (739), Expect = 3.0e-77
Identity = 143/175 (81.71%), Postives = 162/175 (92.57%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           M KGPGLYSDIGK+ARDLLY+DY SDHKFT+TTYS TGVAIT+SG KKG+LFLADV+TQL
Sbjct: 1   MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTD+KVDT+SN+ TTITVDEPAPGLK IFSF VPDQ+SGKVELQYLH+YAGI+TS
Sbjct: 61  KNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 176
           IGLTA+P+VNFSGV G+N +ALGTDLSFDT TGNFTK N GLSF+++DLIASL L
Sbjct: 121 IGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLAL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy Swiss-Prot
Match: P42054 (Outer plastidial membrane protein porin OS=Pisum sativum OX=3888 GN=POR1 PE=1 SV=2)

HSP 1 Score: 274.2 bits (700), Expect = 9.9e-73
Identity = 137/175 (78.29%), Postives = 153/175 (87.43%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           M KGPGLY+DIGK+ARDLLYKDY SD KFTI+TYSPTGVAITSSGTKKG+LFL DVNTQL
Sbjct: 1   MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDT+SNL TTITV+EPAPG+KAI SFKVP+Q SGKVELQYLH+YAGIS+S
Sbjct: 61  KNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 176
           +GL ANPIVNFS V+G+N LA G D+SFDTK G  TK N  ++F   DLI SLTL
Sbjct: 121 VGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy Swiss-Prot
Match: Q9SRH5 (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana OX=3702 GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 262.3 bits (669), Expect = 3.9e-69
Identity = 130/175 (74.29%), Postives = 151/175 (86.29%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           M KGPGLY++IGK+ARDLLYKD+ SD KF+ITT+SP GVAITS+GTKKGDL L DV  Q 
Sbjct: 1   MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQS 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           + KNITTD+KV T S  + T TVDE APGL++IFSFKVPDQ SGKVELQYLH+YAGISTS
Sbjct: 61  RRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 176
           +GLT NP VNFSGV+GSN+LA+GTD+SFDTK+GNFTK+N GLSF   DLIASLT+
Sbjct: 121 MGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTV 175

[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy Swiss-Prot
Match: Q6K548 (Mitochondrial outer membrane protein porin 1 OS=Oryza sativa subsp. japonica OX=39947 GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 240.0 bits (611), Expect = 2.1e-62
Identity = 115/172 (66.86%), Postives = 140/172 (81.40%), Query Frame = 0 

Query: 4   GPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLKNK 63
           GPGLY +IGK+ARDLLY+DYQ+DHKFT+TTY+  GVAIT++ TKK DL   ++ +Q+KNK
Sbjct: 3   GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNK 62

Query: 64  NITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTSIGL 123
           NIT D+K ++ SN+VTT+TVDE  PGLK+I SF VPDQRSGK ELQY HDYAG+S SIGL
Sbjct: 63  NITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGL 122

Query: 124 TANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 176
           TA+P+VN S V G+  LA+G D+S DT TGN TK N GLSF+N DLIASL L
Sbjct: 123 TASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNL 174

[Close]
BLAST of Cucsat.G13260.T6 vs. NCBI nr
Match: XP_011652245.1 (mitochondrial outer membrane protein porin of 34 kDa [Cucumis sativus] >KGN59595.1 hypothetical protein Csa_002619 [Cucumis sativus])

HSP 1 Score: 340 bits (873), Expect = 2.83e-116
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. NCBI nr
Match: XP_008443436.1 (PREDICTED: mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo] >KAA0053740.1 mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo var. makuwa] >TYK25663.1 mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo var. makuwa])

HSP 1 Score: 338 bits (868), Expect = 1.64e-115
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVN GLSFANADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNAGLSFANADLIASLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. NCBI nr
Match: XP_038905108.1 (mitochondrial outer membrane protein porin of 34 kDa [Benincasa hispida])

HSP 1 Score: 337 bits (864), Expect = 6.64e-115
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGV ITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVVITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVN GLSFANADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNAGLSFANADLIASLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. NCBI nr
Match: XP_022152186.1 (mitochondrial outer membrane protein porin of 34 kDa [Momordica charantia])

HSP 1 Score: 337 bits (864), Expect = 6.64e-115
Identity = 172/175 (98.29%), Postives = 175/175 (100.00%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVG+NLL+LGTDLSFDTKTGNFTKVNTGLSF+NADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGTNLLSLGTDLSFDTKTGNFTKVNTGLSFSNADLIASLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. NCBI nr
Match: XP_022934414.1 (mitochondrial outer membrane protein porin of 34 kDa [Cucurbita moschata] >XP_022983848.1 mitochondrial outer membrane protein porin of 34 kDa [Cucurbita maxima] >KAG6580980.1 hypothetical protein SDJN03_20982, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017721.1 hypothetical protein SDJN02_19587 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (855), Expect = 1.56e-113
Identity = 171/175 (97.71%), Postives = 174/175 (99.43%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLY+DYQSD KFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYRDYQSDQKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVG+NLLALGTDLSFDTKTGNFTKVN+GLSFANADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGTNLLALGTDLSFDTKTGNFTKVNSGLSFANADLIASLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy TrEMBL
Match: A0A0A0LC61 (Porin OS=Cucumis sativus OX=3659 GN=Csa_3G827370 PE=3 SV=1)

HSP 1 Score: 340 bits (873), Expect = 1.37e-116
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy TrEMBL
Match: A0A5D3DPS3 (Mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008270 PE=3 SV=1)

HSP 1 Score: 338 bits (868), Expect = 7.92e-116
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVN GLSFANADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNAGLSFANADLIASLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy TrEMBL
Match: A0A1S3B832 (mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo OX=3656 GN=LOC103487026 PE=3 SV=1)

HSP 1 Score: 338 bits (868), Expect = 7.92e-116
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVN GLSFANADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNAGLSFANADLIASLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy TrEMBL
Match: A0A6J1DGV5 (mitochondrial outer membrane protein porin of 34 kDa OS=Momordica charantia OX=3673 GN=LOC111019966 PE=3 SV=1)

HSP 1 Score: 337 bits (864), Expect = 3.22e-115
Identity = 172/175 (98.29%), Postives = 175/175 (100.00%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVG+NLL+LGTDLSFDTKTGNFTKVNTGLSF+NADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGTNLLSLGTDLSFDTKTGNFTKVNTGLSFSNADLIASLTL 175

[Close]
BLAST of Cucsat.G13260.T6 vs. ExPASy TrEMBL
Match: A0A6J1J8W4 (mitochondrial outer membrane protein porin of 34 kDa OS=Cucurbita maxima OX=3661 GN=LOC111482342 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 7.54e-114
Identity = 171/175 (97.71%), Postives = 174/175 (99.43%), Query Frame = 0 

Query: 1   MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
           MGKGPGLYSDIGKRARDLLY+DYQSD KFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1   MGKGPGLYSDIGKRARDLLYRDYQSDQKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120
           KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS
Sbjct: 61  KNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTL 175
           IGLTANPIVNFSGVVG+NLLALGTDLSFDTKTGNFTKVN+GLSFANADLIASLTL
Sbjct: 121 IGLTANPIVNFSGVVGTNLLALGTDLSFDTKTGNFTKVNSGLSFANADLIASLTL 175

The following BLAST results are available for this feature:
BLAST of Cucsat.G13260.T6 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P420551.5e-8184.57Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum OX=411... [more]
P420563.0e-7781.71Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum OX=411... [more]
P420549.9e-7378.29Outer plastidial membrane protein porin OS=Pisum sativum OX=3888 GN=POR1 PE=1 SV... [more]
Q9SRH53.9e-6974.29Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q6K5482.1e-6266.86Mitochondrial outer membrane protein porin 1 OS=Oryza sativa subsp. japonica OX=... [more]
BLAST of Cucsat.G13260.T6 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652245.12.83e-116100.00mitochondrial outer membrane protein porin of 34 kDa [Cucumis sativus] >KGN59595... [more]
XP_008443436.11.64e-11599.43PREDICTED: mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo] >... [more]
XP_038905108.16.64e-11598.86mitochondrial outer membrane protein porin of 34 kDa [Benincasa hispida][more]
XP_022152186.16.64e-11598.29mitochondrial outer membrane protein porin of 34 kDa [Momordica charantia][more]
XP_022934414.11.56e-11397.71mitochondrial outer membrane protein porin of 34 kDa [Cucurbita moschata] >XP_02... [more]
BLAST of Cucsat.G13260.T6 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC611.37e-116100.00Porin OS=Cucumis sativus OX=3659 GN=Csa_3G827370 PE=3 SV=1[more]
A0A5D3DPS37.92e-11699.43Mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo var. makuwa... [more]
A0A1S3B8327.92e-11699.43mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo OX=3656 GN=... [more]
A0A6J1DGV53.22e-11598.29mitochondrial outer membrane protein porin of 34 kDa OS=Momordica charantia OX=3... [more]
A0A6J1J8W47.54e-11497.71mitochondrial outer membrane protein porin of 34 kDa OS=Cucurbita maxima OX=3661... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023614Porin domain superfamilyGENE3D2.40.160.10Porincoord: 2..175
e-value: 2.6E-50
score: 173.3
IPR027246Eukaryotic porin/Tom40PFAMPF01459Porin_3coord: 5..175
e-value: 1.2E-42
score: 146.3
IPR001925Porin, eukaryotic typePANTHERPTHR11743VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNELcoord: 1..175
IPR001925Porin, eukaryotic typeCDDcd07306Porin3_VDACcoord: 5..175
e-value: 2.30857E-52
score: 166.23
NoneNo IPR availablePANTHERPTHR11743:SF68OUTER MEMBRANE PROTEIN PORIN-RELATEDcoord: 1..175

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G13260Cucsat.G13260gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13260.T6.E1Cucsat.G13260.T6.E1exon
Cucsat.G13260.T6.E2Cucsat.G13260.T6.E2exon
Cucsat.G13260.T6.E3Cucsat.G13260.T6.E3exon
Cucsat.G13260.T6.E4Cucsat.G13260.T6.E4exon
Cucsat.G13260.T6.E5Cucsat.G13260.T6.E5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13260.T6.C1Cucsat.G13260.T6.C1CDS
Cucsat.G13260.T6.C2Cucsat.G13260.T6.C2CDS
Cucsat.G13260.T6.C3Cucsat.G13260.T6.C3CDS
Cucsat.G13260.T6.C4Cucsat.G13260.T6.C4CDS
Cucsat.G13260.T6.C5Cucsat.G13260.T6.C5CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G13260.T6Cucsat.G13260.T6-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098656 anion transmembrane transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0015698 inorganic anion transport
cellular_component GO:0005741 mitochondrial outer membrane
molecular_function GO:0008308 voltage-gated anion channel activity