Cucsat.G13260 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13260
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	mitochondrial outer membrane protein porin of 34 kDa
Location	ctg1838: 3349870 .. 3353220 (+)
RNA-Seq Expression	Cucsat.G13260
Synteny	Cucsat.G13260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGATCCAACGGTCAGAAAAGAACGTAAAGGGAAAAAAAAAAAAGAAAAAAAAAGAAAAAGAAAGAAAAAAAAGGGGGCTGAAGTTAGGGTTTGAAAGGTGTATATGAAAGCCACCGAGTCATCCACTCATTTCCAGCTGCTTTGGGGAAGAGGACTATCGTTTCCCTTTCAGAATTTCCATTTCATTTCATTCTTCTCTTGAATCTTTCATTTTTCGTTACAAAAATCATGGGAAAGGGTCCTGGTCTCTACTCTGATATCGGCAAGAGAGCTAGAGGTTATTCATTTCTTCTTTCCATTCCCCCCCTTGTAATATGGTCTTGAATCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTGTTGGTTTTTCTCTTTAATCTTTTTTTATTTTGCTGTTTTCTTTGCCAGATCTTCTTTACAAAGACTACCAGAGCGACCACAAGTTCACCATCACCACCTACTCCCCCACTGGAGTTGTGAGTTCCTCTTGACACTCTCTTTACTTTCTAGATCTGTTTTGGGGTCCTACTTTCATCGGGGGATATAATTTACACTGGTGAATGAATCTTAAAGAACACAAAAGAAAGAAAGAAAAAACAAGTGCAAATAAGCTTCTTTATGAGTTTTTTACTTTCTTTTTATTGTTTAACGGATTGCAATTATTATTTTCCTTTTTTTTTTTTGTTCATTGATTATGAAGGGAGCCTGCTCTTATATGTTTCTGATTTGGATTGGATTTTTGCTTTTTTGGAGTTAATGATTATAGGGTTTTTTTCCTTTTATTTCAATGGTCATTGACAAATGCACTGGCATTATCACTCGACACTCACTTTATGAAGTATATTTGTTTCCTTTTCAACTCAATATGCTCCATGTAGTAGAAATTCTTACTGTCCTAATATCTGGGTCGTGTTAATGACTCCAGGATGCATGGTGTGGTTATTTTGCCTTTTATCATATTGCATGCACTGGTTATTATCGATAGTGATTCACGATTCTTTTGCACCGAATGTGTGTTTAATCTAAACCAGTGCATGTTAATATCAGTTGTGGTTGCTTACTGGGGATGCTATGTATTTTGTAAGAAACATATATAATGCTTATCCTCTATTATTACAAGCTTTTGCTTATTATTTATTTATATTTTTCTATCTCCAGGCTATTACATCTTCAGGAACGAAGAAGGGTGACCTGTTTCTTGCTGATGTTAATACTCAGCTGAAGAACAAAAATATCACAACTGATATTAAAGTCGACACAAGCTCCAATGTAAACCATTTTTCTTCTTTCTGCTTTATCATATCCCTCTGCTTTAGATTTAAGTATCGTACTTGCCTTCTCTTTGTCCCTCTTTCTCCATTACTTGTTGCATGGATTTTCTAAATTTATTTATATTCCTTTTAATTCCATAGACATTTTCCATTAGCAGGTCAGAAATTTAAAAGCTTTAGTTGGTGTAGTATCATTGTTGTTTCAACTTATCTAGTCAATTCCTTTGTACTTTTGTGGAGCTGAAGTGAGTGTTTATCAGGCGTCTTTATTGTAAAGCTAGATTCCATTGTCCAGTTAATCTCTTTGTACTTTTGTGGAGCTGAATAGAAAATCACCATTTTCTATCGGTTTGTTTTGATGTGAAAAGCAGCAAGCCTGCCTATCACCGTAGCTCATGATCATTTGACAATCTGAGTGAAGCTATGATGGTTCTCTATTTTGTTTGAGGCAGTTCTTTTCTGAATATATAATGATTTGTTTTTTGAGACTGTAAGCTATGGGGCTCCTGTTGTTTCTCCCATCCCCATCCGCGCATGCACAAATTGATGAAACTTTGAATTTTAAATTAAGGATAGGTTGTGGAAGTTGTACGTTTTTTGAGACTGGTATTTGGTGGGGAAGTTGCACGTTTCTTCTTATTCTTTTTATCATATTTCTTCTTATGCAATTGTTGTGACTTCTGTTCTGTAATTTTGTAGCTTGTGACAACTATCACTGTGGATGAACCTGCTCCTGGATTGAAGGCAATTTTTAGTTTCAAAGTCCCGGATCAAAGGTCTGGTAAGGTGAGTGATGGAACAATGTGTTTTCAGTCTCAGTATATCGTGTTCTTTTATTTTTACTTTTTATGGAGCTGTGCATTTCCTTTTTACTTTTTGTGCTGACCAATCAGGCTACAATAGTTATAAAACAGGTAGATATAATCAGCCTAATTGATTTCTGTTTTTGTCAAGTAGGTGGAACTGCAATATCTCCATGATTATGCAGGAATCAGCACGAGTATTGGGTTGACAGCCAATCCTATTGTCAACTTTTCTGGTGTTGTTGGGTCAAATCTTCTTGCCCTTGGTACCGATCTTTCATTTGATACCAAAACTGGAAACTTCACAAAAGTCAATACTGGACTGAGCTTTGCCAACGCTGACCTAATTGCATCTCTGACCTTGTGAGTTTTTTATTTAGTCAGACTCTTCATTTACGCCTATAGTGTGCTCCTTTTCCTTTTTGGTACTTATTAAGGCGAATAATTAATGTTCAGGAATGACAAGGGTGATACGTTGAGTGCATCCTACTACCATACAGTGAACCCTTTGACAAGCACCGCTGTTGGTGCGGAGGTTGCTCATAGCTTTTCCTCCAACGAGAACACCATCACGGTTGGCACCCAACATGCACTTGATCCACTGACCTCAGTGAAGGCTCGGGTGAACAATTTTGGAAAGGCAAGTGCTCTTATCCAGCATGAGTGGCGTCCAAAATCATTCTTCACTGTATCTGGTGAGGTAGACACGAAAGCAATTGAGAAGAGCGCAAAAGTTGGGCTAGCTTTGGCCTTGAAGCCATGATAGGAAATTTTAGTCACTAGTTTGCTATGGCTGGAAGAATTAAGGGTAGGGCTTCTGGTACATAGCCGGACTTGTTTGTTCAGACTTTGAGATGATGTGTTGATGTCACTCTTGCCAGTTGTTTTGGGTTGTCGAAATAAATGTTAAAGTTGATGGTGTCATTAAGCAGACCACTTTGGTTGGTGTACCCTCCCCTTTTTTTGCACTCTGATCAGTCCCTTTCCAAACTGAGGCCAATGAAAACTTGTTGAGAAGATTTACCATTGAGATGTTGTTTCTATTTACTTTTCGTTTTCCTTCTTTTAACCACTCCCACCCCCACCCCCCAAAGAGAAAAAAAAAGGGATAATCTTCAGCCCCAATTATACTGTTTTGGTGATAATATGTATATTTGATCGTCTGAGGGCTTTTTTTAGTGCAGGTTGTAAACTCACGACAGAAAATTGTCCAAAAGAACAAAAAACTCAAACTTTTATCTAAGACTTATTTTTTAACATGCTTATTTTACCCTTTGAGATGTGAAATATC

Coding sequence (CDS)

ATGGGAAAGGGTCCTGGTCTCTACTCTGATATCGGCAAGAGAGCTAGAGATCTTCTTTACAAAGACTACCAGAGCGACCACAAGTTCACCATCACCACCTACTCCCCCACTGGAGTTGCTATTACATCTTCAGGAACGAAGAAGGGTGACCTGTTTCTTGCTGATGTTAATACTCAGCTGAAGAACAAAAATATCACAACTGATATTAAAGTCGACACAAGCTCCAATCTTGTGACAACTATCACTGTGGATGAACCTGCTCCTGGATTGAAGGCAATTTTTAGTTTCAAAGTCCCGGATCAAAGGTCTGGTAAGGTGGAACTGCAATATCTCCATGATTATGCAGGAATCAGCACGAGTATTGGGTTGACAGCCAATCCTATTGTCAACTTTTCTGGTGTTGTTGGGTCAAATCTTCTTGCCCTTGGTACCGATCTTTCATTTGATACCAAAACTGGAAACTTCACAAAAGTCAATACTGGACTGAGCTTTGCCAACGCTGACCTAATTGCATCTCTGACCTTGAATGACAAGGGTGATACGTTGAGTGCATCCTACTACCATACAGTGAACCCTTTGACAAGCACCGCTGTTGGTGCGGAGGTTGCTCATAGCTTTTCCTCCAACGAGAACACCATCACGGTTGGCACCCAACATGCACTTGATCCACTGACCTCAGTGAAGGCTCGGGTGAACAATTTTGGAAAGGCAAGTGCTCTTATCCAGCATGAGTGGCGTCCAAAATCATTCTTCACTGTATCTGGTGAGGTAGACACGAAAGCAATTGAGAAGAGCGCAAAAGTTGGGCTAGCTTTGGCCTTGAAGCCATGA

Protein sequence

MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLKNKNITTDIKVDTSSNLVTTITVDEPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISTSIGLTANPIVNFSGVVGSNLLALGTDLSFDTKTGNFTKVNTGLSFANADLIASLTLNDKGDTLSASYYHTVNPLTSTAVGAEVAHSFSSNENTITVGTQHALDPLTSVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIEKSAKVGLALALKP

Homology

[Close]

BLAST of Cucsat.G13260 vs. ExPASy Swiss-Prot
Match: P42055 (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 4.5e-34
Identity = 68/77 (88.31%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLY++IGK+ARDLLYKDYQSDHKF+ITTYSPTGV ITSSG+KKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 78
          KNKN+TTDIKVDT+SN+
Sbjct: 61 KNKNVTTDIKVDTNSNL 77

[Close]

BLAST of Cucsat.G13260 vs. ExPASy Swiss-Prot
Match: P42054 (Outer plastidial membrane protein porin OS=Pisum sativum OX=3888 GN=POR1 PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 5.5e-32
Identity = 67/77 (87.01%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          M KGPGLY+DIGK+ARDLLYKDY SD KFTI+TYSPTGVAITSSGTKKG+LFL DVNTQL
Sbjct: 1  MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 78
          KNKNITTDIKVDT+SN+
Sbjct: 61 KNKNITTDIKVDTNSNL 77

[Close]

BLAST of Cucsat.G13260 vs. ExPASy Swiss-Prot
Match: P42056 (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-31
Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          M KGPGLYSDIGK+ARDLLY+DY SDHKFT+TTYS TGVAIT+SG KKG+LFLADV+TQL
Sbjct: 1  MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQL 60

Query: 61 KNKNITTDIKVDTSSNV 78
          KNKNITTD+KVDT+SNV
Sbjct: 61 KNKNITTDVKVDTNSNV 77

[Close]

BLAST of Cucsat.G13260 vs. ExPASy Swiss-Prot
Match: Q9SMX3 (Mitochondrial outer membrane protein porin 3 OS=Arabidopsis thaliana OX=3702 GN=VDAC3 PE=1 SV=3)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-24
Identity = 52/77 (67.53%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          M KGPGLY++IGK+ARDLLY+DYQ D KF++TTYS TGVAIT++GT KG LFL DV TQ+
Sbjct: 1  MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQV 60

Query: 61 KNKNITTDIKVDTSSNV 78
          KN N T D+KV T S++
Sbjct: 61 KNNNFTADVKVSTDSSL 77

[Close]

BLAST of Cucsat.G13260 vs. ExPASy Swiss-Prot
Match: Q9SRH5 (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana OX=3702 GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 110.9 bits (276), Expect = 9.4e-24
Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          M KGPGLY++IGK+ARDLLYKD+ SD KF+ITT+SP GVAITS+GTKKGDL L DV  Q 
Sbjct: 1  MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQS 60

Query: 61 KNKNITTDIKVDTSS 76
          + KNITTD+KV T S
Sbjct: 61 RRKNITTDLKVCTDS 75

[Close]

BLAST of Cucsat.G13260 vs. NCBI nr
Match: XP_008443436.1 (PREDICTED: mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo] >KAA0053740.1 mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo var. makuwa] >TYK25663.1 mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (390), Expect = 4.38e-44
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDTSSN+
Sbjct: 61 KNKNITTDIKVDTSSNL 77

[Close]

BLAST of Cucsat.G13260 vs. NCBI nr
Match: XP_011652245.1 (mitochondrial outer membrane protein porin of 34 kDa [Cucumis sativus] >KGN59595.1 hypothetical protein Csa_002619 [Cucumis sativus])

HSP 1 Score: 154 bits (390), Expect = 4.38e-44
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDTSSN+
Sbjct: 61 KNKNITTDIKVDTSSNL 77

[Close]

BLAST of Cucsat.G13260 vs. NCBI nr
Match: XP_022152186.1 (mitochondrial outer membrane protein porin of 34 kDa [Momordica charantia])

HSP 1 Score: 154 bits (390), Expect = 4.38e-44
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDTSSN+
Sbjct: 61 KNKNITTDIKVDTSSNL 77

[Close]

BLAST of Cucsat.G13260 vs. NCBI nr
Match: XP_038905108.1 (mitochondrial outer membrane protein porin of 34 kDa [Benincasa hispida])

HSP 1 Score: 153 bits (386), Expect = 1.75e-43
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGV ITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVVITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDTSSN+
Sbjct: 61 KNKNITTDIKVDTSSNL 77

[Close]

BLAST of Cucsat.G13260 vs. NCBI nr
Match: XP_018835940.1 (mitochondrial outer membrane protein porin of 34 kDa-like [Juglans regia])

HSP 1 Score: 152 bits (384), Expect = 3.51e-43
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGK+ARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKKARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDT+SN+
Sbjct: 61 KNKNITTDIKVDTNSNL 77

[Close]

BLAST of Cucsat.G13260 vs. ExPASy TrEMBL
Match: A0A5D3DPS3 (Mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008270 PE=3 SV=1)

HSP 1 Score: 154 bits (390), Expect = 2.12e-44
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDTSSN+
Sbjct: 61 KNKNITTDIKVDTSSNL 77

[Close]

BLAST of Cucsat.G13260 vs. ExPASy TrEMBL
Match: A0A0A0LC61 (Porin OS=Cucumis sativus OX=3659 GN=Csa_3G827370 PE=3 SV=1)

HSP 1 Score: 154 bits (390), Expect = 2.12e-44
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDTSSN+
Sbjct: 61 KNKNITTDIKVDTSSNL 77

[Close]

BLAST of Cucsat.G13260 vs. ExPASy TrEMBL
Match: A0A6J1DGV5 (mitochondrial outer membrane protein porin of 34 kDa OS=Momordica charantia OX=3673 GN=LOC111019966 PE=3 SV=1)

HSP 1 Score: 154 bits (390), Expect = 2.12e-44
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDTSSN+
Sbjct: 61 KNKNITTDIKVDTSSNL 77

[Close]

BLAST of Cucsat.G13260 vs. ExPASy TrEMBL
Match: A0A1S3B832 (mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo OX=3656 GN=LOC103487026 PE=3 SV=1)

HSP 1 Score: 154 bits (390), Expect = 2.12e-44
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDTSSN+
Sbjct: 61 KNKNITTDIKVDTSSNL 77

[Close]

BLAST of Cucsat.G13260 vs. ExPASy TrEMBL
Match: A0A2I4FWC5 (mitochondrial outer membrane protein porin of 34 kDa-like OS=Juglans regia OX=51240 GN=LOC109002589 PE=3 SV=1)

HSP 1 Score: 152 bits (384), Expect = 1.70e-43
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MGKGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60
          MGKGPGLYSDIGK+ARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL
Sbjct: 1  MGKGPGLYSDIGKKARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQL 60

Query: 61 KNKNITTDIKVDTSSNV 77
          KNKNITTDIKVDT+SN+
Sbjct: 61 KNKNITTDIKVDTNSNL 77

The following BLAST results are available for this feature:

BLAST of Cucsat.G13260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42055	4.5e-34	88.31	Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum OX=411...	[more]
P42054	5.5e-32	87.01	Outer plastidial membrane protein porin OS=Pisum sativum OX=3888 GN=POR1 PE=1 SV...	[more]
P42056	2.7e-31	84.42	Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum OX=411...	[more]
Q9SMX3	1.9e-24	67.53	Mitochondrial outer membrane protein porin 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SRH5	9.4e-24	72.00	Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Cucsat.G13260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443436.1	4.38e-44	98.70	PREDICTED: mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo] >...	[more]
XP_011652245.1	4.38e-44	98.70	mitochondrial outer membrane protein porin of 34 kDa [Cucumis sativus] >KGN59595...	[more]
XP_022152186.1	4.38e-44	98.70	mitochondrial outer membrane protein porin of 34 kDa [Momordica charantia]	[more]
XP_038905108.1	1.75e-43	97.40	mitochondrial outer membrane protein porin of 34 kDa [Benincasa hispida]	[more]
XP_018835940.1	3.51e-43	96.10	mitochondrial outer membrane protein porin of 34 kDa-like [Juglans regia]	[more]

BLAST of Cucsat.G13260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPS3	2.12e-44	98.70	Mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo var. makuwa...	[more]
A0A0A0LC61	2.12e-44	98.70	Porin OS=Cucumis sativus OX=3659 GN=Csa_3G827370 PE=3 SV=1	[more]
A0A6J1DGV5	2.12e-44	98.70	mitochondrial outer membrane protein porin of 34 kDa OS=Momordica charantia OX=3...	[more]
A0A1S3B832	2.12e-44	98.70	mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo OX=3656 GN=...	[more]
A0A2I4FWC5	1.70e-43	96.10	mitochondrial outer membrane protein porin of 34 kDa-like OS=Juglans regia OX=51...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027246	Eukaryotic porin/Tom40	PFAM	PF01459	Porin_3	coord: 5..106 e-value: 2.2E-22 score: 79.8
IPR023614	Porin domain superfamily	GENE3D	2.40.160.10	Porin	coord: 2..120 e-value: 2.6E-26 score: 94.4
None	No IPR available	PANTHER	PTHR11743:SF52	PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN	coord: 1..107
IPR001925	Porin, eukaryotic type	PANTHER	PTHR11743	VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL	coord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13260.T1	Cucsat.G13260.T1	mRNA
Cucsat.G13260.T6	Cucsat.G13260.T6	mRNA
Cucsat.G13260.T7	Cucsat.G13260.T7	mRNA
Cucsat.G13260.T3	Cucsat.G13260.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098656	anion transmembrane transport
biological_process	GO:0015698	inorganic anion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005741	mitochondrial outer membrane
molecular_function	GO:0008308	voltage-gated anion channel activity