Cucsat.G13211.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATTATTTTTATTGGTGCAATAACATCATATTTAGCCTATTTTTCCATACGTTTTTATAATTTTAAGAACTAAATTTACTATTTGACAATATAAGTATGTAAAGTAGATTTGTTAAAAAGTGTAAAAAAAAAAAATCCTATAACTACATAAAAGTTTACTGTGCAAATTGTAATTAAAAAAGAAACATTTGGATGAAAACAAATTTGATAGAAAGTTAAAGAAAGAAATCTTGGAAACAAATCCCAATTCTTGTGTCCATTATATACAAATAATAATAATTGAACGAAGCATGTCCCACTTCCCGATCACTTGGGAAGATATTGGGGACGATTCGTCTTATATATAAATAATAAAATACTATTCTCCCCATTTTTTTTTTATTGTTTTTAAATCTCTCAATCGCTTGCTTCCAATTCAATATATATTCGTATTTATTCATGTATGTATTTAGAGAAAATAATTTATTTTACTTTTGTAGATGGAAGAATCAAATATTTGATCTTAAACTCAATAATATAAGATCCATCATATATCTTTCAAATGGCTTTCTAAAATATCAATGTTATTCTTTTAAAAATATGATCTCATAGCAAATGAAAGAAAAAAAAAGTTTTTAAGGATTGATAAGATCCTATTTTAAATTAGTTGTGTCAAGTTGTAAGGGGTTTCTTAATAAAAATGTGTAATAAGTTTCTAAACAGTAGTTTAAAATTTGAACAATAAATCTAAAATATTCCAAAAAAAGCAACTTTTTTCTTCATAATTTTGAAGTTTTAAAAGTATATTTTATCCATCTCCTTCCACTTATTTGCTAATCTTCTTTAATTATTATTTTCAATTTAAAGTGTAATATCAACCTTTTCAAATAGTAATTAAAAAACATTAAAGTTAAAAAAATAGTAAAAAATACAAAAAAAACTATTTACACTCGTGAATCAAGATTACATATTTAAATTTAATATACGATTAACAAAAATTGTTGGATATTGATACACAATTCTTTAGATGTGGGTACAATATCATGTACCAAATCTATAAGATCGCGTATCTAATATAAAAAGAAGATTGAATACCAAATATAAATACACGATCTTGAAAAAAATGGTTAAATATTGATATTTGATCATTTAGATTTGGATATCATTTCATACCTAATTGCTATTATAAGAAGAATGACACATCGTGACTAATTAATTGCATGTTGATTGAGGCATTATTGATATTTTTCATTGAAGACATATGGTGACAATGTATACCGTGTACAAATTTTGGTTTTTTAAATAGTTTATTTTTCCTATTTTTAAAAAACCAAAAATTAAAAAAGTTTAATATTATTTTAGTTATTGTTTTCTAATTCAAAACCTTAATTTTAATTCCTATACTATCAAAAATTTGGTTGGTTTTAGTTTTTATAATTTACTTTTAAAAAACAATCAATTTGGTTGGATCAAAATAGTTAACTTAAAAAAAAAAAAAAAGTTCAAATAACAAAATGAAACAGGGTTTAAAATTTAAGAAAATATGTGAACCACCAAAGTAATCCAAAGTTAAGAACATAAAAGAGAAAAATAAATATTTGAAAAGTAACGTGACGAAAGAGACTAAAATCAAATAGTATTTTTATTTCCTAAAAAAAATAAAATAGTATTTAAAATTTTGAATAAAATAAATACATATGAAGTTAGAAAAAAAAATTCGGAAGATTTGCAACAAAATCCGGTCGGATCTTGCTTCGTGTGATGTTAATCGTGGTGGGTCTTTTTTTTTTTTTTTTTTTCCTTTTCTTTTATATAATTTTTTTCCCTTCCTCTTAAAACCAACGCAAACCCACCAAATTTTCCCCCTCTCTCTCTCTTTCTTTCCTGTGATTCTGAATTTGAAGCAAAATGGTTATGGCTGCCGATTCCCAATTCCATGTTCTTGCCGTTGATGATAGCCTCATAGATAGAAAGCTCATCGAAAGGCTTCTCAAAACCTCCTCATATCAAGGTATTTTTAATTTTATTTTTTAAACTTTTATGCATATATTCTAAATTTAAATTCCCAATTTCTTTTCATTTTTTTTTTTTCTGATTTGGATTTGTTTTTCTGTAGTTACTACGGTTGATTCTGGTAGCAAGGCCTTGGAATTTCTTGGTTTGATTCAAGAACATCAACCTACAAACTTCAAATCGTCTTCTAATTCTTCTTTTTCCTCCCCTAATAATCATCATCAGGTTATTCAATTTCAGATTTGGATTCATTTTTTTCTCATTCCAATCTATTCCCTTCCCCTGTTTCTGAAATTTTGTGTTTGTTCAGGAAGTGGAAGTGAATCTTATCATCACTGATTACTGTATGCCTGGAATGACTGGCTTCGATTTACTCAAGAAAGTTAAGGTAAAAAAGCAAAAAAGAGAGAAATTCTATAGTGTTTTCTTAGTTCTACTTTTTTTTTAAAATTTTCTGTAGAATGCGTTTGTCTTGTTTCGGACACCACTTGTTTGATGAAAAATCTCATAGAATATTTTTCTCACCTAACTTTTCTATTCTAATCAATTAGATCTGAAAATTCTGTTTTCCTCTGTAACTAATTAGGAATTTACCTAACTTTCCTGGAAAATCTATTTTTATCGAGAAACAAACAGAGAAATAAGTAAAGAATTTGTGTGAAATTGCAGGAATCAACATCGCTAAGAAACATACCAGTGGTGATAATGTCATCGGAAAACGTACCTTCAAGAATCAACAGGTAACGATTTGCAATTTTGATTTGGCCTCGATCTGTGATATCGCACGATCGGAAACTGATGGAGTCGGATTGGATTAATTTGAAAGCAGATGTTTAGAAGAAGGCGCGGAGGAGTTTTTTCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCGCATATGATGAAGACGAAAGTGAAGGAAGATCAAAATCGAGAAGAAGGAGAAGAAGAATCAAGAACAGAGACCGAATTGAAGTTGGTACAAGAAGAAGAAGGGGAAATTGAGTTTGAGATGATGAGTAAGAAGAGAAAGGGAGGTACGGAAGAAGAAGAAGAAGAAGGTTTGGAGGAGGAGATGAGAAGAAGAAGAAGAAGATACAACAACAATGGCGTCGCAACGGCGATTTGATTAAACGATACGGCAACGGAGGCGGGGCATTAGAGAAATTGTATATAAGAGAGAGAGGTTATTGAAAAGAAATTTAGAAGAAGATGGTGATTCGTTTCTTACAATGGAAGATTTGTTATACATCAAATTCAATTTTGTTTTTCCATTTCTAAACTCAATAACAAACTCTCCTCCTCCAATTACCATTTTAATTTTTTAAAAACTATCTTACAAACTAAAATGTACATTTGG ATGGTTATGGCTGCCGATTCCCAATTCCATGTTCTTGCCGTTGATGATAGCCTCATAGATAGAAAGCTCATCGAAAGGCTTCTCAAAACCTCCTCATATCAAGTTACTACGGTTGATTCTGGTAGCAAGGCCTTGGAATTTCTTGGTTTGATTCAAGAACATCAACCTACAAACTTCAAATCGTCTTCTAATTCTTCTTTTTCCTCCCCTAATAATCATCATCAGGTTATTCAATTTCAGATTTGGATTCATTTTTTTCTCATTCCAATCTATTCCCTTCCCCTGTTTCTGAAATTTTGTGTTTGTTCAGGAAGTGGAAGTGAATCTTATCATCACTGA MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFSSPNNHHQVIQFQIWIHFFLIPIYSLPLFLKFCVCSGSGSESYHH Homology
BLAST of Cucsat.G13211.T4 vs. ExPASy Swiss-Prot
Match: O80366 (Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.9e-17 Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. ExPASy Swiss-Prot
Match: Q4GZK7 (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16 Identity = 55/88 (62.50%), Postives = 63/88 (71.59%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. ExPASy Swiss-Prot
Match: Q942A1 (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica OX=39947 GN=RR4 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16 Identity = 55/88 (62.50%), Postives = 63/88 (71.59%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. ExPASy Swiss-Prot
Match: O80365 (Two-component response regulator ARR8 OS=Arabidopsis thaliana OX=3702 GN=ARR8 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15 Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. ExPASy Swiss-Prot
Match: B8BLZ4 (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN=RR10 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15 Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. NCBI nr
Match: XP_004136644.1 (two-component response regulator ORR9 [Cucumis sativus] >KGN59458.1 hypothetical protein Csa_001048 [Cucumis sativus]) HSP 1 Score: 149 bits (376), Expect = 1.40e-42 Identity = 77/89 (86.52%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. NCBI nr
Match: XP_008443275.1 (PREDICTED: two-component response regulator ORR9-like [Cucumis melo]) HSP 1 Score: 146 bits (368), Expect = 2.90e-41 Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. NCBI nr
Match: XP_038903262.1 (two-component response regulator ORR9 [Benincasa hispida]) HSP 1 Score: 139 bits (350), Expect = 1.06e-38 Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. NCBI nr
Match: KAG6580890.1 (Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017647.1 Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131 bits (329), Expect = 1.41e-35 Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. NCBI nr
Match: XP_022934156.1 (two-component response regulator ARR9 isoform X2 [Cucurbita moschata]) HSP 1 Score: 131 bits (329), Expect = 1.45e-35 Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. ExPASy TrEMBL
Match: A0A0A0LCF4 (Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822100 PE=4 SV=1) HSP 1 Score: 149 bits (376), Expect = 6.76e-43 Identity = 77/89 (86.52%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. ExPASy TrEMBL
Match: A0A1S3B7P3 (two-component response regulator ORR9-like OS=Cucumis melo OX=3656 GN=LOC103486897 PE=4 SV=1) HSP 1 Score: 146 bits (368), Expect = 1.40e-41 Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. ExPASy TrEMBL
Match: A0A6J1F120 (two-component response regulator ARR9 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441410 PE=4 SV=1) HSP 1 Score: 131 bits (329), Expect = 7.00e-36 Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. ExPASy TrEMBL
Match: A0A6J1F6V6 (two-component response regulator ARR9 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441410 PE=4 SV=1) HSP 1 Score: 131 bits (329), Expect = 7.19e-36 Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of Cucsat.G13211.T4 vs. ExPASy TrEMBL
Match: A0A6J1J8R0 (two-component response regulator ORR9 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482353 PE=4 SV=1) HSP 1 Score: 127 bits (320), Expect = 1.68e-34 Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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