Cucsat.G13100.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CGTAAAATTTTTCAGCCCATTTTTAGTAGTTTTGGCTACGCCATGAAAATGGATTCCCGGGAAAATCTACTCATCGTCACCGAGGCATCACAAATTTCACCCTCTGCAACAGAAATTTGAAAACGCTGAAGAAAAATGCTCTCCGGCAATCCTTTCGTCCTCTCCAAAACCTCGTTTGGATCTCTATGTTCTTTTCCTTCGATAACTCGTCGCAGATCGTCTTCAACCTCCGTCGTCGCTGATTCTACGGTCAGGAATAGCACTGATGTAGCTACTTCACAGTCGCGAAGGACCATTTCCGCTCAGGAAGCTCGAATTTCTCTTGTTTTTGCACTCGCTTCACAAGCATCTACTCTCTCTCAGCGCGGTAATGTCTCAGTATTTGATTTAATGATTGATAGTACTAGAAGTTATAGTTCTCGTTTAATTCGCTCTTTTCGGTTGGTCTGCAGTTTTGTTGGAATTGGCTTCTGAAACTTCGAAATACTTGTTGCCTAAAAGGTTCGACAGTCGGAATTTAGAGGAGGCTCTAATGGCAGGTATTTCTACGTAGAGAACTGTGTTTGTTGGTTGTGAAATTCACACTTGCGACATTCGTCCTGCGATTGAACTCCATTGCAATCCAGCTCGTATTTCTATCTCTTAATTGTTATGAGTCTAATAATTTGTTTTGAGTTAATCTAGTTCCTGATCTCGAGACTCTGAAGTTCAAGGTCTTAAGTCGAAGAGACGAATATGAGATTAGGGAGGTTGAGGTATAATTTCCTCTCTCCTCAATTTACTCTTGTACTGCCTCATTGCTTCAAACCTAAATATAATATTGACTTATTCTAACAATTAGCTTACAAACTATGACTGCGATCGTTGGACAGCCTTACTTTATAGCGGAAACTACCATGCCTGGGAAGAGTGGATTTGATTTCGGTGGTGCCTCTCAATCCTTCAATGTCTTGGCCGCGTACCTCTTTGGTAAGGTAGATCTGAAGCTCCGAGATGAAGCTTGTTAATCTTGATTTCTGTTTGCCATCCTAATCTGAATCCGGTCCTAATACCAGAATAAGGCAAGAGAGAAAATGGAAATGACAACACCTGTTTTGACGAGTCAATACAAATCCGATGGGGAAAAGATGGATACGACAACCCCTGTAATAACTAAAAATGTAAGTTCTTCACATCTTGACACCTGTTAGGCCTCCTCTTTACATCCTTGTTCTCAAATGTGATATTTATTGGTTTTCCATTTCGATGTAATTTTTCTCTTCCATTTTTGTTTTTTTAGGTCGATGGTAAAGATCAGTGGAAGATGTCATTTGTGATACCCTCCAAATACGGTCAGAATTTTCCAGTTCCCCAAGACACATCTGTTAGGATTCAAGAAGTCCCCAGGAAAATTCTTGCGGTTGTAGCCTTTTCAGGTCTGTTTCATTTTAACCTAGAAACTCCATTTACT ATGCTCTCCGGCAATCCTTTCGTCCTCTCCAAAACCTCGTTTGGATCTCTATGTTCTTTTCCTTCGATAACTCGTCGCAGATCGTCTTCAACCTCCGTCGTCGCTGATTCTACGGTCAGGAATAGCACTGATGTAGCTACTTCACAGTCGCGAAGGACCATTTCCGCTCAGGAAGCTCGAATTTCTCTTGTTTTTGCACTCGCTTCACAAGCATCTACTCTCTCTCAGCGCGTTTTGTTGGAATTGGCTTCTGAAACTTCGAAATACTTGTTGCCTAAAAGGTTCGACAGTCGGAATTTAGAGGAGGCTCTAATGGCAGTTCCTGATCTCGAGACTCTGAAGTTCAAGGTCTTAAGTCGAAGAGACGAATATGAGATTAGGGAGGTTGAGCCTTACTTTATAGCGGAAACTACCATGCCTGGGAAGAGTGGATTTGATTTCGGTGGTGCCTCTCAATCCTTCAATGTCTTGGCCGCGTACCTCTTTGAATAA MLSGNPFVLSKTSFGSLCSFPSITRRRSSSTSVVADSTVRNSTDVATSQSRRTISAQEARISLVFALASQASTLSQRVLLELASETSKYLLPKRFDSRNLEEALMAVPDLETLKFKVLSRRDEYEIREVEPYFIAETTMPGKSGFDFGGASQSFNVLAAYLFE Homology
BLAST of Cucsat.G13100.T2 vs. ExPASy Swiss-Prot
Match: Q9SR77 (Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g10130 PE=1 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.6e-35 Identity = 77/110 (70.00%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. NCBI nr
Match: XP_004149204.1 (heme-binding-like protein At3g10130, chloroplastic [Cucumis sativus] >KGN59135.1 hypothetical protein Csa_002265 [Cucumis sativus]) HSP 1 Score: 295 bits (754), Expect = 5.83e-98 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. NCBI nr
Match: XP_016899615.1 (PREDICTED: heme-binding-like protein At3g10130, chloroplastic [Cucumis melo] >KAA0043880.1 heme-binding-like protein [Cucumis melo var. makuwa] >TYK25257.1 heme-binding-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 275 bits (702), Expect = 4.61e-90 Identity = 152/162 (93.83%), Postives = 155/162 (95.68%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. NCBI nr
Match: XP_038904637.1 (heme-binding-like protein At3g10130, chloroplastic [Benincasa hispida]) HSP 1 Score: 249 bits (635), Expect = 6.75e-80 Identity = 138/162 (85.19%), Postives = 148/162 (91.36%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. NCBI nr
Match: XP_022144616.1 (heme-binding-like protein At3g10130, chloroplastic [Momordica charantia]) HSP 1 Score: 234 bits (597), Expect = 3.87e-74 Identity = 134/162 (82.72%), Postives = 141/162 (87.04%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. NCBI nr
Match: XP_023005922.1 (heme-binding-like protein At3g10130, chloroplastic [Cucurbita maxima]) HSP 1 Score: 229 bits (584), Expect = 3.29e-72 Identity = 132/162 (81.48%), Postives = 142/162 (87.65%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. ExPASy TrEMBL
Match: A0A0A0LAW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776950 PE=3 SV=1) HSP 1 Score: 295 bits (754), Expect = 2.82e-98 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. ExPASy TrEMBL
Match: A0A5A7TKZ9 (Heme-binding-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003900 PE=3 SV=1) HSP 1 Score: 275 bits (702), Expect = 2.23e-90 Identity = 152/162 (93.83%), Postives = 155/162 (95.68%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. ExPASy TrEMBL
Match: A0A1S4DV81 (heme-binding-like protein At3g10130, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486613 PE=3 SV=1) HSP 1 Score: 275 bits (702), Expect = 2.23e-90 Identity = 152/162 (93.83%), Postives = 155/162 (95.68%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. ExPASy TrEMBL
Match: A0A6J1CTY1 (heme-binding-like protein At3g10130, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014259 PE=3 SV=1) HSP 1 Score: 234 bits (597), Expect = 1.87e-74 Identity = 134/162 (82.72%), Postives = 141/162 (87.04%), Query Frame = 0
BLAST of Cucsat.G13100.T2 vs. ExPASy TrEMBL
Match: A0A6J1KUH7 (heme-binding-like protein At3g10130, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498783 PE=3 SV=1) HSP 1 Score: 229 bits (584), Expect = 1.59e-72 Identity = 132/162 (81.48%), Postives = 142/162 (87.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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