Cucsat.G12790.T1 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G12790.T1
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionmRNA cap-binding protein
Locationctg1838: 4399142 .. 4402496 (-)
RNA-Seq ExpressionCucsat.G12790.T1
SyntenyCucsat.G12790.T1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATTGTGGACTTTAGCTCGGTACGATTTGCCAACATTGTTTTTCTGAAATATTATTCTTATATTAAGGTTATCTATGAGTCTTTGCAATTATTTGTTTTTCAAATGATTAAATTTTGTTTCTCTCATGCATGTAGGTCGAAGGTTTTTGGATAAGCTATTGTCATTTGGCTCGTCCGGCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATTCGTCCACTTTGGGAGGTAATACATTAAGGAATGCTGCATGCATACTTTTCCTTAGGCTTATTAGGGAGTCTTTCTGGTTCTTTTCGTAACTTGCTGGAATTTGTATTTCTCTGCTCATTGGGGAGCCTAATTCCTATTTCAATGCAAATGGAACTATGTTTCAGGATTCTGCCAACTGTAATGGTGGGAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTAAGTGATAGCAAAAATGACATGTTGATCAATATGGAAAGTTATCCAATTGTGTGATATTTATTTTTCCCTTTGGTTTCTTATTTCCTAATCAACTGTTATCAATTTGATTGTTGAAATCTGAAATAGCCTGAAAATACTGTTGGATAATTATACAATAGCTTCATTTTCTTAAATAATGATAATACTAAAAATATGAAAGTAGTAGTCCCTTCCCCCCAACCCCACCACAAAAAAAAAAAAAAAAAACCCATAGAACCGTAAAGTGTTAGTTAAAGTGATGGTTTAACCGGCTTTGTCACCATTTTTATTTTTATTAGTTGTTGATGTCTTCAGTTGACATATTATGAAAGCGGTGGAAGGAAGTATCATAAAATTTTATTTTGTTCAAAAGAGTTAGCCATTTCACACCTCCAGTTTGCAGATGATACAATTTTATTTTGTTATGGTAAAGAGGAGTTCTCTCTTACAATCATTCCAATGGTAGATTTCTTTAAATCGATATCGGGTCTAAAAATTAATAGGACCAAATGCCAGATCATGGGGATTCATAGTGATACTCATAAGATAAGGAGACGGGCAGATGCCTTTGGGTGTGAAGTTGGTTTCTTTCCTTGACTATGTCTAGGGCTTTCTCTGGAGGGTAAACCGAGAATCGCTTCCTTTTGGGATCCTATAGTTGATAAGATTTGCAAAAGGCTTGCGTCTTGGAAAAGGTACTTCTAAAGTGGGAAGACTAACTTTAATGAAAGCTGTGCTTTCGGGTGTGTCTGTATACTGTCTATCTCTATTCAGGACTCCCAGTTTGGTATGTAAAATTTTAGAAAAGCACATGAGACACTTCTTGTGGTATGTTATTGATGAAGGAATGGGGTCTCATCGTCTTAGCAGGGAAGTGTTGGGGTGTCTGTTGCATCAAGGGGGTTTGGAGATTGGTAACTGGAGGAGCGGCAATAGAGCTTTGTTGGCAAAGTGGCTATTTCGCTTTTATCATGAACCAGAGGTTTTGTGGCATAAAATCATTGTAAGTAAATATGGTAACCACCCTTCTGAAGAGATATCGGAAAGGGCTAAAAGCACTCATAAAAATCCCTGGATTAGCTTCGCTTTTGAATTACGTACATTCTTTTTATTCACTCATTGTGTTGTGCGGGATGGTCAGAATACTTATTTCTGGGAGGATCAGTGGGTTGGAGATAATATTCTTTCCATCTTTTCCACGCCTGTATCATTTATCTACCATTAAAAATCATGGATCTTTTTATGTCTGAAAATTCTGTTTCCTTTTCCGTTGGGTTATGTCGTAATTTCACCCATAGATAGACGACAGAGGTTGTTTTGTCTCTTGTTGAAAGGGCTTTGAAAGGGATCGTCATAAGACTTTAGGCGCATATGGTGAAGGACTACCCTTTCTTTTTGAATATATGCCATTAATAAACGATACCAAATTAACCAATAAAGAGACGAAGCTAACAAATGCCATATTGAACCTAAACTAAAGACGGATATAATCACTCATGGAATACTTTTTGATTTATTAAGAAGACTGAGGGAGTCTTAAAGATGAAGGTCGAAGCAAGGATAGCAGCTAAAGAAGAAAAAAGAAACGAGAGAGATTTAAAGAAGAAAATGTTCGTAGTTTTCGGTCTTTTAGCATTTGAGTTCATGCAGACGGTGGAATGAATGCTTCCTTTTGCAGTAGTTTGCAACAGAAAATTTCTGTGCATCATGGTTTTTATTTGATAATATTTTGTATTTCGATTGAATATCCACGTTATTTATTTAGGTTTCTACATCTGAAAGTTGTAATTAACTTATTTTTTATCTCATGTCTGCATTAAAGATATTGTCCATGCCTTCAGAAGTGAGAAGAATCTCTACATCTCTTCGATTGCCTTCTTTGTGCACGTCCTTCATTTGTGTCAAACTTGCATGTGCTTGAGTACTTATTGCATGTGCTTGGGTACTTAACACGAGCTTTCACCTATGCGTATTCATTATTCCATAAATCAATCAAAGCTTCCGTTGTATGCTTCTGCAGGTTCTTGCATTAGTGGGCGATCAACTTGATTTTGGCGATAACATATGTGGTGCTGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTTTGGAACCGCAATGCATCTGATCATCAGGTCAGTAACACAATCGTTTACTGCTACCCACCACACTTAGGTTCATTACACAGCCACAAGTTAATTTATTGTACGATTTTTACCCTACCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCACATGGATATGTAATGGAATACAAACCTCACGACGCGTCTCTGCGTGATAACTCGTCATACAGAAACACTTGGTTGCGAGGATGAGAAAAAGGAGAATGTGCTTCAAAACTGAACGATGTTTACATGGTCTGCACCTCCTTAATTGCTATTGACCCGTCTTTGGATGTTAAGCAATTAATTCCCTCTGATAATTTTTTTCTTCAGGACATTGGAGCTTTTCTTAATTACATGTTTGTTCTAAGGTGAATAGGTTACTATGTAATGTAAATATTTGGACATTTGTAACTGTAAACTGCTCTGAACAAGGACCTTGGAAGAGACACCTACACCTTAGATCAACTTTCTGTTTACATGTTATAACTTAACATTTTTCATTTTCTTGGGACAAAACTTAGATCCACATCACCAGCTGCTTCACTCAGACTGTTTGTTTGTTAAATTAGTCACATGATTATACCATCCAATTCTTAATTCACTTCTTTCTAATAATCAATTTCTGGCAGCAGGTGTAGCTGTTGGAATAGGGGAGCAGCTAAGCTCTGTTCTATCCATTGTATGAGTGGTAACTAACTCTTGTTATAATCAT

Coding sequence (CDS)

AAGATTGTGGACTTTAGCTCGGTCGAAGGTTTTTGGATAAGCTATTGTCATTTGGCTCGTCCGGCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATTCGTCCACTTTGGGAGGATTCTGCCAACTGTAATGGTGGGAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGCGATCAACTTGATTTTGGCGATAACATATGTGGTGCTGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTTTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCACATGGATATGTAATGGAATACAAACCTCACGACGCGTCTCTGCGTGATAACTCGTCATACAGAAACACTTGGTTGCGAGGATGA

Protein sequence

KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Homology
[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy Swiss-Prot
Match: Q9FK59 (Eukaryotic translation initiation factor NCBP OS=Arabidopsis thaliana OX=3702 GN=NCBP PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 4.7e-79
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           K+V+FS+VEGFW  YCHLAR + LPSPTDLH FK+GIRPLWED ANCNGGKWIIRF KVV
Sbjct: 71  KMVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVV 130

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           S RFWEDL+LALVGDQLD  DNICGAVLS+RFNEDI+SVWNRNASDHQAVMGLRDSIKRH
Sbjct: 131 SARFWEDLLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRH 190

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 152
           LKLPH YVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 191 LKLPHAYVMEYKPHDASLRDNSSYRNTWLRG 221

[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy Swiss-Prot
Match: A3RCV9 (Eukaryotic translation initiation factor NCBP OS=Triticum aestivum OX=4565 GN=NCBP PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 8.0e-79
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFS+VE FW+ YCHLARP+SLPSPTDLHLFKEG+RPLWED AN NGGKWIIRFKK V
Sbjct: 82  KIVDFSTVESFWVCYCHLARPSSLPSPTDLHLFKEGVRPLWEDPANRNGGKWIIRFKKAV 141

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVL LVGDQLD+ D++CG VLS RFNEDILSVWNRNASDHQAVM LRDSIKRH
Sbjct: 142 SGRFWEDLVLVLVGDQLDYSDDVCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRH 201

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 152
           LKLPH Y+MEYKPHDASLRDNSSYRNTWLRG
Sbjct: 202 LKLPHTYLMEYKPHDASLRDNSSYRNTWLRG 232

[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy Swiss-Prot
Match: Q10NQ9 (Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica OX=39947 GN=NCBP PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-78
Identity = 131/151 (86.75%), Postives = 139/151 (92.05%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFS+VE FW+ YCHL RP SLPSPTDLHLFKEGIRPLWED AN +GGKWIIRFKK V
Sbjct: 77  KIVDFSTVESFWVCYCHLTRPVSLPSPTDLHLFKEGIRPLWEDPANRSGGKWIIRFKKTV 136

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVL LVGDQLD+ D++CG VLS+RFNEDILSVWNRNASDHQAVM LRDSIKRH
Sbjct: 137 SGRFWEDLVLVLVGDQLDYSDDVCGVVLSVRFNEDILSVWNRNASDHQAVMTLRDSIKRH 196

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 152
           LKLPH Y+MEYKPHDASLRDNSSYRNTWLRG
Sbjct: 197 LKLPHSYLMEYKPHDASLRDNSSYRNTWLRG 227

[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy Swiss-Prot
Match: O60573 (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens OX=9606 GN=EIF4E2 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-42
Identity = 73/139 (52.52%), Postives = 100/139 (71.94%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           +I  F+SVE FW  Y H+ RP  L   +D HLFKEGI+P+WED AN NGGKWIIR +K +
Sbjct: 84  QIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGL 143

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           + R WE+L+LA++G+Q   G+ ICGAV+S+RF EDI+S+WN+ ASD      +RD+++R 
Sbjct: 144 ASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRV 203

Query: 121 LKLPHGYVMEYKPHDASLR 140
           L LP   +MEYK H  S++
Sbjct: 204 LNLPPNTIMEYKTHTDSIK 222

[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy Swiss-Prot
Match: Q8BMB3 (Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-42
Identity = 73/139 (52.52%), Postives = 100/139 (71.94%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           +I  F+SVE FW  Y H+ RP  L   +D HLFKEGI+P+WED AN NGGKWIIR +K +
Sbjct: 84  QIGTFASVEQFWKFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGL 143

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           + R WE+L+LA++G+Q   G+ ICGAV+S+RF EDI+S+WN+ ASD      +RD+++R 
Sbjct: 144 ASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRV 203

Query: 121 LKLPHGYVMEYKPHDASLR 140
           L LP   +MEYK H  S++
Sbjct: 204 LNLPPNTIMEYKTHTDSIK 222

[Close]
BLAST of Cucsat.G12790.T1 vs. NCBI nr
Match: XP_004141135.1 (eukaryotic translation initiation factor NCBP [Cucumis sativus] >KAE8651273.1 hypothetical protein Csa_002372 [Cucumis sativus])

HSP 1 Score: 324 bits (831), Expect = 7.08e-111
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 88  KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 147

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 148 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 207

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 208 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790.T1 vs. NCBI nr
Match: XP_038904121.1 (eukaryotic translation initiation factor NCBP isoform X3 [Benincasa hispida])

HSP 1 Score: 323 bits (827), Expect = 1.09e-110
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFW+SYCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 60  KIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 119

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 120 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 179

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 180 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 210

[Close]
BLAST of Cucsat.G12790.T1 vs. NCBI nr
Match: KAG7018154.1 (Eukaryotic translation initiation factor NCBP, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323 bits (827), Expect = 2.34e-110
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFW+SYCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 82  KIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 141

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 142 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 201

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 202 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 232

[Close]
BLAST of Cucsat.G12790.T1 vs. NCBI nr
Match: XP_038904120.1 (eukaryotic translation initiation factor NCBP isoform X2 [Benincasa hispida])

HSP 1 Score: 323 bits (827), Expect = 2.88e-110
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFW+SYCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 88  KIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 147

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 148 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 207

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 208 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790.T1 vs. NCBI nr
Match: XP_008464961.1 (PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis melo] >KAA0057191.1 eukaryotic translation initiation factor NCBP [Cucumis melo var. makuwa] >TYK18770.1 eukaryotic translation initiation factor NCBP [Cucumis melo var. makuwa])

HSP 1 Score: 323 bits (827), Expect = 2.88e-110
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFW+SYCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 88  KIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 147

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 148 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 207

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 208 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy TrEMBL
Match: A0A5A7UUL0 (mRNA cap-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00770 PE=3 SV=1)

HSP 1 Score: 323 bits (827), Expect = 1.40e-110
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFW+SYCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 88  KIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 147

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 148 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 207

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 208 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy TrEMBL
Match: A0A1S3CMT8 (mRNA cap-binding protein OS=Cucumis melo OX=3656 GN=LOC103502707 PE=3 SV=1)

HSP 1 Score: 323 bits (827), Expect = 1.40e-110
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFW+SYCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 88  KIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 147

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 148 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 207

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 208 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy TrEMBL
Match: A0A6J1IS20 (mRNA cap-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111479999 PE=3 SV=1)

HSP 1 Score: 323 bits (827), Expect = 1.66e-110
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFW+SYCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 93  KIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 152

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 153 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 212

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 213 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 243

[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy TrEMBL
Match: A0A6J1DPB4 (mRNA cap-binding protein OS=Momordica charantia OX=3673 GN=LOC111022952 PE=3 SV=1)

HSP 1 Score: 323 bits (827), Expect = 1.66e-110
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFW+SYCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 93  KIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 152

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 153 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 212

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 213 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 243

[Close]
BLAST of Cucsat.G12790.T1 vs. ExPASy TrEMBL
Match: A0A6J1EVP3 (mRNA cap-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111436995 PE=3 SV=1)

HSP 1 Score: 323 bits (827), Expect = 1.66e-110
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 60
           KIVDFSSVEGFW+SYCHLARP+SLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV
Sbjct: 93  KIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVV 152

Query: 61  SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 120
           SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH
Sbjct: 153 SGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRH 212

Query: 121 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 151
           LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 213 LKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 243

The following BLAST results are available for this feature:
BLAST of Cucsat.G12790.T1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FK594.7e-7987.42Eukaryotic translation initiation factor NCBP OS=Arabidopsis thaliana OX=3702 GN... [more]
A3RCV98.0e-7987.42Eukaryotic translation initiation factor NCBP OS=Triticum aestivum OX=4565 GN=NC... [more]
Q10NQ91.4e-7886.75Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica OX... [more]
O605732.1e-4252.52Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens OX=9606 GN=EI... [more]
Q8BMB32.1e-4252.52Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=E... [more]
BLAST of Cucsat.G12790.T1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141135.17.08e-111100.00eukaryotic translation initiation factor NCBP [Cucumis sativus] >KAE8651273.1 hy... [more]
XP_038904121.11.09e-11098.68eukaryotic translation initiation factor NCBP isoform X3 [Benincasa hispida][more]
KAG7018154.12.34e-11098.68Eukaryotic translation initiation factor NCBP, partial [Cucurbita argyrosperma s... [more]
XP_038904120.12.88e-11098.68eukaryotic translation initiation factor NCBP isoform X2 [Benincasa hispida][more]
XP_008464961.12.88e-11098.68PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis melo] >KAA0057... [more]
BLAST of Cucsat.G12790.T1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UUL01.40e-11098.68mRNA cap-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CMT81.40e-11098.68mRNA cap-binding protein OS=Cucumis melo OX=3656 GN=LOC103502707 PE=3 SV=1[more]
A0A6J1IS201.66e-11098.68mRNA cap-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111479999 PE=3 SV=1[more]
A0A6J1DPB41.66e-11098.68mRNA cap-binding protein OS=Momordica charantia OX=3673 GN=LOC111022952 PE=3 SV=... [more]
A0A6J1EVP31.66e-11098.68mRNA cap-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111436995 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 1..131
e-value: 3.9E-44
score: 150.2
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 1..151
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10RNA Cap, Translation Initiation Factor Eif4ecoord: 1..149
e-value: 1.8E-51
score: 176.2
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 1..147
NoneNo IPR availablePANTHERPTHR11960:SF50BNAA10G16710D PROTEINcoord: 1..151
IPR019770Eukaryotic translation initiation factor 4E (eIF-4E), conserved sitePROSITEPS00813IF4Ecoord: 29..52

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G12790Cucsat.G12790gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G12790.T1.E1Cucsat.G12790.T1.E1exon
Cucsat.G12790.T1.E2Cucsat.G12790.T1.E2exon
Cucsat.G12790.T1.E3Cucsat.G12790.T1.E3exon
Cucsat.G12790.T1.E4Cucsat.G12790.T1.E4exon
Cucsat.G12790.T1.E5Cucsat.G12790.T1.E5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G12790.T1.C5Cucsat.G12790.T1.C5CDS
Cucsat.G12790.T1.C4Cucsat.G12790.T1.C4CDS
Cucsat.G12790.T1.C3Cucsat.G12790.T1.C3CDS
Cucsat.G12790.T1.C2Cucsat.G12790.T1.C2CDS
Cucsat.G12790.T1.C1Cucsat.G12790.T1.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G12790.T1Cucsat.G12790.T1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
biological_process GO:0006417 regulation of translation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003743 translation initiation factor activity