Cucsat.G12790 (gene) Cucumber (B10) v3

Overview
NameCucsat.G12790
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionmRNA cap-binding protein
Locationctg1838: 4399261 .. 4402127 (-)
RNA-Seq ExpressionCucsat.G12790
SyntenyCucsat.G12790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATTGTGGACTTTAGCTCGGTACGATTTGCCAACATTGTTTTTCTGAAATATTATTCTTATATTAAGGTTATCTATGAGTCTTTGCAATTATTTGTTTTTCAAATGATTAAATTTTGTTTCTCTCATGCATGTAGGTCGAAGGTTTTTGGATAAGCTATTGTCATTTGGCTCGTCCGGCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATTCGTCCACTTTGGGAGGTAATACATTAAGGAATGCTGCATGCATACTTTTCCTTAGGCTTATTAGGGAGTCTTTCTGGTTCTTTTCGTAACTTGCTGGAATTTGTATTTCTCTGCTCATTGGGGAGCCTAATTCCTATTTCAATGCAAATGGAACTATGTTTCAGGATTCTGCCAACTGTAATGGTGGGAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTAAGTGATAGCAAAAATGACATGTTGATCAATATGGAAAGTTATCCAATTGTGTGATATTTATTTTTCCCTTTGGTTTCTTATTTCCTAATCAACTGTTATCAATTTGATTGTTGAAATCTGAAATAGCCTGAAAATACTGTTGGATAATTATACAATAGCTTCATTTTCTTAAATAATGATAATACTAAAAATATGAAAGTAGTAGTCCCTTCCCCCCAACCCCACCACAAAAAAAAAAAAAAAAAACCCATAGAACCGTAAAGTGTTAGTTAAAGTGATGGTTTAACCGGCTTTGTCACCATTTTTATTTTTATTAGTTGTTGATGTCTTCAGTTGACATATTATGAAAGCGGTGGAAGGAAGTATCATAAAATTTTATTTTGTTCAAAAGAGTTAGCCATTTCACACCTCCAGTTTGCAGATGATACAATTTTATTTTGTTATGGTAAAGAGGAGTTCTCTCTTACAATCATTCCAATGGTAGATTTCTTTAAATCGATATCGGGTCTAAAAATTAATAGGACCAAATGCCAGATCATGGGGATTCATAGTGATACTCATAAGATAAGGAGACGGGCAGATGCCTTTGGGTGTGAAGTTGGTTTCTTTCCTTGACTATGTCTAGGGCTTTCTCTGGAGGGTAAACCGAGAATCGCTTCCTTTTGGGATCCTATAGTTGATAAGATTTGCAAAAGGCTTGCGTCTTGGAAAAGGTACTTCTAAAGTGGGAAGACTAACTTTAATGAAAGCTGTGCTTTCGGGTGTGTCTGTATACTGTCTATCTCTATTCAGGACTCCCAGTTTGGTATGTAAAATTTTAGAAAAGCACATGAGACACTTCTTGTGGTATGTTATTGATGAAGGAATGGGGTCTCATCGTCTTAGCAGGGAAGTGTTGGGGTGTCTGTTGCATCAAGGGGGTTTGGAGATTGGTAACTGGAGGAGCGGCAATAGAGCTTTGTTGGCAAAGTGGCTATTTCGCTTTTATCATGAACCAGAGGTTTTGTGGCATAAAATCATTGTAAGTAAATATGGTAACCACCCTTCTGAAGAGATATCGGAAAGGGCTAAAAGCACTCATAAAAATCCCTGGATTAGCTTCGCTTTTGAATTACGTACATTCTTTTTATTCACTCATTGTGTTGTGCGGGATGGTCAGAATACTTATTTCTGGGAGGATCAGTGGGTTGGAGATAATATTCTTTCCATCTTTTCCACGCCTGTATCATTTATCTACCATTAAAAATCATGGATCTTTTTATGTCTGAAAATTCTGTTTCCTTTTCCGTTGGGTTATGTCGTAATTTCACCCATAGATAGACGACAGAGGTTGTTTTGTCTCTTGTTGAAAGGGCTTTGAAAGGGATCGTCATAAGACTTTAGGCGCATATGGTGAAGGACTACCCTTTCTTTTTGAATATATGCCATTAATAAACGATACCAAATTAACCAATAAAGAGACGAAGCTAACAAATGCCATATTGAACCTAAACTAAAGACGGATATAATCACTCATGGAATACTTTTTGATTTATTAAGAAGACTGAGGGAGTCTTAAAGATGAAGGTCGAAGCAAGGATAGCAGCTAAAGAAGAAAAAAGAAACGAGAGAGATTTAAAGAAGAAAATGTTCGTAGTTTTCGGTCTTTTAGCATTTGAGTTCATGCAGACGGTGGAATGAATGCTTCCTTTTGCAGTAGTTTGCAACAGAAAATTTCTGTGCATCATGGTTTTTATTTGATAATATTTTGTATTTCGATTGAATATCCACGTTATTTATTTAGGTTTCTACATCTGAAAGTTGTAATTAACTTATTTTTTATCTCATGTCTGCATTAAAGATATTGTCCATGCCTTCAGAAGTGAGAAGAATCTCTACATCTCTTCGATTGCCTTCTTTGTGCACGTCCTTCATTTGTGTCAAACTTGCATGTGCTTGAGTACTTATTGCATGTGCTTGGGTACTTAACACGAGCTTTCACCTATGCGTATTCATTATTCCATAAATCAATCAAAGCTTCCGTTGTATGCTTCTGCAGGTTCTTGCATTAGTGGGCGATCAACTTGATTTTGGCGATAACATATGTGGTGCTGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTTTGGAACCGCAATGCATCTGATCATCAGGTCAGTAACACAATCGTTTACTGCTACCCACCACACTTAGGTTCATTACACAGCCACAAGTTAATTTATTGTACGATTTTTACCCTACCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCACATGGATATGTAATGGAATACAAACCTCACGACGCGTCTCTGCGTGATAACTCGTCATACAGAAACACTTGGTTGCGAGGATGAGAAAAAGGAGAATGTGCTTCAAAACTGAACGATGTTTACATGGTCTGCACCTCCTTAATTGCTATTGACCCGTCTTTGGATGTTAAGCAATTAATTCCCTCTGATAATTTTTTTCTTCAGGACATTGGAGCTTTTCTTAATTACATGTTTGTTCTAAGGTGAATAGGTTACTATGTAATGTAAATATTTGGACATTTGTAACTGTAAACTGCTCTGAACAAGGACCTTGGAAGAGACACCTACACCTTAGATCAACTTTCTGTTTACATGTTATAACTTAACATTTTTCATTTTCTTGGGACAAAACTTAGATCCACATCACCAGCTGCTTCACTCAGACTGTTTGTTTGTTAAATTAGTCACATGATTATACCATCCAATTCTTAATTCACTTCTTTCTAATAATCAATTTCTGGCAGCAGGTGTAGCTGTTGGAATAGGGGAGCAGCTAAGCTCTGTTCTATCCATTGTATGAGTGGTAACTAACTCTTGTTATAATCAT

Coding sequence (CDS)

AAGATTGTGGACTTTAGCTCGGTCGAAGGTTTTTGGATAAGCTATTGTCATTTGGCTCGTCCGGCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATTCGTCCACTTTGGGAGGATTCTGCCAACTGTAATGGTGGGAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGCGATCAACTTGATTTTGGCGATAACATATGTGGTGCTGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTTTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCACATGGATATGTAATGGAATACAAACCTCACGACGCGTCTCTGCGTGATAACTCGTCATACAGAAACACTTGGTTGCGAGGATGA

Protein sequence

KIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Homology
[Close]
BLAST of Cucsat.G12790 vs. ExPASy Swiss-Prot
Match: Q9FK59 (Eukaryotic translation initiation factor NCBP OS=Arabidopsis thaliana OX=3702 GN=NCBP PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 6.6e-57
Identity = 100/112 (89.29%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++D ANCNGGKWIIRF KVVS RFWEDL+LALVGDQLD  DNICGAVLS+RFNEDI+SV
Sbjct: 110 LWEDGANCNGGKWIIRFSKVVSARFWEDLLLALVGDQLDDADNICGAVLSVRFNEDIISV 169

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 117
           WNRNASDHQAVMGLRDSIKRHLKLPH YVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 170 WNRNASDHQAVMGLRDSIKRHLKLPHAYVMEYKPHDASLRDNSSYRNTWLRG 221

[Close]
BLAST of Cucsat.G12790 vs. ExPASy Swiss-Prot
Match: Q10NQ9 (Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica OX=39947 GN=NCBP PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.2e-54
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++D AN +GGKWIIRFKK VSGRFWEDLVL LVGDQLD+ D++CG VLS+RFNEDILSV
Sbjct: 116 LWEDPANRSGGKWIIRFKKTVSGRFWEDLVLVLVGDQLDYSDDVCGVVLSVRFNEDILSV 175

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 117
           WNRNASDHQAVM LRDSIKRHLKLPH Y+MEYKPHDASLRDNSSYRNTWLRG
Sbjct: 176 WNRNASDHQAVMTLRDSIKRHLKLPHSYLMEYKPHDASLRDNSSYRNTWLRG 227

[Close]
BLAST of Cucsat.G12790 vs. ExPASy Swiss-Prot
Match: A3RCV9 (Eukaryotic translation initiation factor NCBP OS=Triticum aestivum OX=4565 GN=NCBP PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 8.9e-54
Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++D AN NGGKWIIRFKK VSGRFWEDLVL LVGDQLD+ D++CG VLS RFNEDILSV
Sbjct: 121 LWEDPANRNGGKWIIRFKKAVSGRFWEDLVLVLVGDQLDYSDDVCGIVLSCRFNEDILSV 180

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 117
           WNRNASDHQAVM LRDSIKRHLKLPH Y+MEYKPHDASLRDNSSYRNTWLRG
Sbjct: 181 WNRNASDHQAVMTLRDSIKRHLKLPHTYLMEYKPHDASLRDNSSYRNTWLRG 232

[Close]
BLAST of Cucsat.G12790 vs. ExPASy Swiss-Prot
Match: Q22888 (Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans OX=6239 GN=ife-4 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.9e-30
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++D ANC GGKWIIR KK +S R WE+L++A++G+Q   GD +CGAV SIR  EDI+S+
Sbjct: 99  VWEDPANCKGGKWIIRLKKGLSTRIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISL 158

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNT 113
           WNRNA D      +R++++  L+LP   V+EYK HD  LRD SSYR+T
Sbjct: 159 WNRNADDTPVTNRIRETLRSVLQLPQNTVLEYKRHDDCLRDQSSYRHT 206

[Close]
BLAST of Cucsat.G12790 vs. ExPASy Swiss-Prot
Match: O60573 (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens OX=9606 GN=EIF4E2 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.4e-27
Identity = 51/100 (51.00%), Postives = 74/100 (74.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           M++D AN NGGKWIIR +K ++ R WE+L+LA++G+Q   G+ ICGAV+S+RF EDI+S+
Sbjct: 123 MWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISI 182

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLR 105
           WN+ ASD      +RD+++R L LP   +MEYK H  S++
Sbjct: 183 WNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIK 222

[Close]
BLAST of Cucsat.G12790 vs. NCBI nr
Match: XP_038904121.1 (eukaryotic translation initiation factor NCBP isoform X3 [Benincasa hispida])

HSP 1 Score: 234 bits (598), Expect = 1.97e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 99  LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 158

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 159 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 210

[Close]
BLAST of Cucsat.G12790 vs. NCBI nr
Match: KAG7018154.1 (Eukaryotic translation initiation factor NCBP, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234 bits (598), Expect = 4.05e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 121 LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 180

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 181 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 232

[Close]
BLAST of Cucsat.G12790 vs. NCBI nr
Match: XP_038904120.1 (eukaryotic translation initiation factor NCBP isoform X2 [Benincasa hispida])

HSP 1 Score: 234 bits (598), Expect = 4.92e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 127 LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 186

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 187 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790 vs. NCBI nr
Match: XP_004141135.1 (eukaryotic translation initiation factor NCBP [Cucumis sativus] >KAE8651273.1 hypothetical protein Csa_002372 [Cucumis sativus])

HSP 1 Score: 234 bits (598), Expect = 4.92e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 127 LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 186

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 187 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790 vs. NCBI nr
Match: XP_008464961.1 (PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis melo] >KAA0057191.1 eukaryotic translation initiation factor NCBP [Cucumis melo var. makuwa] >TYK18770.1 eukaryotic translation initiation factor NCBP [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (598), Expect = 4.92e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 127 LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 186

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 187 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790 vs. ExPASy TrEMBL
Match: A0A5A7UUL0 (mRNA cap-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00770 PE=3 SV=1)

HSP 1 Score: 234 bits (598), Expect = 2.38e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 127 LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 186

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 187 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790 vs. ExPASy TrEMBL
Match: A0A1S3CMT8 (mRNA cap-binding protein OS=Cucumis melo OX=3656 GN=LOC103502707 PE=3 SV=1)

HSP 1 Score: 234 bits (598), Expect = 2.38e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 127 LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 186

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 187 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238

[Close]
BLAST of Cucsat.G12790 vs. ExPASy TrEMBL
Match: A0A6J1IS20 (mRNA cap-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111479999 PE=3 SV=1)

HSP 1 Score: 234 bits (598), Expect = 2.80e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 132 LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 191

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 192 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 243

[Close]
BLAST of Cucsat.G12790 vs. ExPASy TrEMBL
Match: A0A6J1DPB4 (mRNA cap-binding protein OS=Momordica charantia OX=3673 GN=LOC111022952 PE=3 SV=1)

HSP 1 Score: 234 bits (598), Expect = 2.80e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 132 LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 191

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 192 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 243

[Close]
BLAST of Cucsat.G12790 vs. ExPASy TrEMBL
Match: A0A6J1EVP3 (mRNA cap-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111436995 PE=3 SV=1)

HSP 1 Score: 234 bits (598), Expect = 2.80e-76
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 5   MFQDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 64
           +++DSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV
Sbjct: 132 LWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSV 191

Query: 65  WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 116
           WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG
Sbjct: 192 WNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 243

The following BLAST results are available for this feature:
BLAST of Cucsat.G12790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FK596.6e-5789.29Eukaryotic translation initiation factor NCBP OS=Arabidopsis thaliana OX=3702 GN... [more]
Q10NQ95.2e-5484.82Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica OX... [more]
A3RCV98.9e-5485.71Eukaryotic translation initiation factor NCBP OS=Triticum aestivum OX=4565 GN=NC... [more]
Q228886.9e-3053.70Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans OX=6239 ... [more]
O605735.4e-2751.00Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens OX=9606 GN=EI... [more]
BLAST of Cucsat.G12790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038904121.11.97e-7697.32eukaryotic translation initiation factor NCBP isoform X3 [Benincasa hispida][more]
KAG7018154.14.05e-7697.32Eukaryotic translation initiation factor NCBP, partial [Cucurbita argyrosperma s... [more]
XP_038904120.14.92e-7697.32eukaryotic translation initiation factor NCBP isoform X2 [Benincasa hispida][more]
XP_004141135.14.92e-7697.32eukaryotic translation initiation factor NCBP [Cucumis sativus] >KAE8651273.1 hy... [more]
XP_008464961.14.92e-7697.32PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis melo] >KAA0057... [more]
BLAST of Cucsat.G12790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UUL02.38e-7697.32mRNA cap-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CMT82.38e-7697.32mRNA cap-binding protein OS=Cucumis melo OX=3656 GN=LOC103502707 PE=3 SV=1[more]
A0A6J1IS202.80e-7697.32mRNA cap-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111479999 PE=3 SV=1[more]
A0A6J1DPB42.80e-7697.32mRNA cap-binding protein OS=Momordica charantia OX=3673 GN=LOC111022952 PE=3 SV=... [more]
A0A6J1EVP32.80e-7697.32mRNA cap-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111436995 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 1..131
e-value: 3.9E-44
score: 150.2
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 1..151
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10RNA Cap, Translation Initiation Factor Eif4ecoord: 1..149
e-value: 1.8E-51
score: 176.2
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 1..147
NoneNo IPR availablePANTHERPTHR11960:SF50BNAA10G16710D PROTEINcoord: 1..151
IPR019770Eukaryotic translation initiation factor 4E (eIF-4E), conserved sitePROSITEPS00813IF4Ecoord: 29..52

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G12790.T1Cucsat.G12790.T1mRNA
Cucsat.G12790.T2Cucsat.G12790.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006417 regulation of translation
biological_process GO:0006413 translational initiation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003723 RNA binding