Cucsat.G12674.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTCACACGGTTTCTTCTTCAACACTCTGAGCTGATTCACTCATTGATTTTTTTTTCTCTCTCTCTCTATGGATTAAAAAATTAAAAGTGGAAGTAAGAGATCGCCAATCGCCAATCGCCATAACCCATCTTCCACGGCTCTTCATTTAAGTGCGCAATTAGTGCCTTCAATTTACATTTCTCTGTTTTTGCCGCCTCTTCTTCCCTTTTTTGCTTCTACTACTGTCTTGTCAACTTCTTCAATTTCTTTTTTCAAAATTCTTATCAATTTTTTTAAAAAAAATAAATTTCGGTAAAGAATACTGATAGATGAATGGTTGATTGATGATAGATAAACCCACCACTATAACCCCCATTTAACTTCAAACACTATTCCTGTCATTTGTAGTTGTTGCGCCACTTAAATCCAAACCAAACTACCCCATTTCTCTCTCTCTCTTTTTTTTTTCTCTCGAACCCTAGATTTTCTTTTCAAATTTGCTTCTGGGTTTGTGGTGGATTAGCCCCACGAGGTGGGATTTTGAGCTTTTATCTTGTTGTGTTAGTTATTTTTTGTTCTGGGGTTGATTTGATTTGAATTTGAGCTGTAATGAGTGAAGATAATTCAGACCCAATTGAGGGAAGTGGCAATGAAGATTGTTAATCCATTTCACATGCATTGCTTCTATGGGAAAGAGTGAAGAAGAACAGCCACTGCCGGTTGGAGGGAGCTCCTCTGAGCTTTCTGACCGGAATGTGGAGAACAGATGCGGCGGCGGTGGGTGCTCTGAGATTCGTAGACTGATTGCGGTGAGATGTGTGTTCTTTCTGTTACTATCAGCGGCTGTGTTTCTCTCTGCTATTTTTTGGCTGCCACCGTTCCTATCCTATGGAAATTGGCCGGATCGGCCAGTTGATTCTGCTTATAGAGGTTGGAACCTTCCTCATTTTCTTTGGTTTCATGGCTTTCTTGTTCTGGTTTCTAGGGTTTTGAGTGCTTAGAATTCTGTTGATAGGTATCGGTATTTGTTATTAGATTACCATTCTCTTGTCGCTGTGACTTCTGAGGATATAATCAAGAGTTGGGATACAAATTTTGATTGTTCTGAAGAGTAGGTTGTTTTGGAACTGTTGTTCTTGTGTAGATGGTTTTTTGTGGAAGAATCATAGTTGTGATTTATTTGATTTGATAGCAATGTAAGAAAAGAAATTTGCAATCATGGGGAGATTTGAGACCAAGCTTGATTATGCTCTAGTCTTTCATGACTCAAGAGAAACAGTTGGAAGATTAACTTCAATTGCTCTAAAAATAGAGGTCAAGATGACAAATGACTAAAAAAGCAAGTGGAAGAATTTGTAAAAACCAATTGACCAAGTAATAATAAATAAACAGAAAATTCAACATTGATCCCTGAAACTTGGTGTTCATAAACTTTTAATTTTATCAAAATGTATGTCACAATTTTGACCTTTAGTTAGAATTCCATTGCATTTATCCACTGGGTTTAGAAAAAGAAATGTAAATCTCCCAAACCCACTTATTTTAATGAAATGAAACCCCAACAAACTAAAGCACGAAATCAAGTCTCAGCAAGTCAATGAGAAAGTTTAATTATTGAATAATTCTCTTCAATTTCACTAGTTTCAACAAAAATCTAGCTCTAGGCCTCCTCCAACTTAGACCTGGGACCTCTCATCCGTAAGGCCTCCATGTTGTGTTCTCCCATTTTGTTGAATGTACTTCCTTGCTTCTCATTAAGAAAGATAATAATAAAAAATCCAGCCCTAGTCGATTGAACCGAAATAACTAGAATGTTATTGAAACAGAAAATGAATTGGTTAGTTAGGTCAAGGTTATGACCATTTGTCATCGTTATCCCCACATTGCTTCATTTTTCTGGTGGTATCTATGCATGAAGTGGTTAACAAGTTCCAGTGCTCCAACACAAAAAGCTCAAGGAAACACATAAATAAACACATAGTAATATATTGCAAATTGCAATATACTATTTCTTGTAGTATTTAATTTACTCCACATAAATTATATTATTTTCACTGAAATTATATGATTTTATCTCACTTCCAGATCATGACATAGTAGCGAGTTTTCATGCTTCAAAGCCAGTTCCTTTTCTGCAAAAACATATTTTTGAGCTTGAGGATAACATTTTTGGAGAAATACCCATACCTTCTGTCAAGGTATCCAGTTCTGTTTCCTGTTTTCTCTGGCTTGATAAGTCATATTTTTGGCCGTTTGATCTAATACTCCTTTTGAACCAGGTGGCTATCCTCTCACTACAATCATTAGGTGGACCAAATGTAACAAAAATAGTTTTTGCGGTAGATTCTGATGCCAAGTATTCAAAAATTCCCCCAACATCTCAAAGTTTAATCAAGGAAACCTTTGAAACATTGGTTATAAATGAACCTCCTCTCAGACTGAATGAATCTTTATTTGGCAATACATCCTTATTCGAGGTGTTGAAATTTCCTGGAGGAATAACTATTATTCCTCCTCAGAGTGCATTTCTTCTTCAGACGGCGCAGATCTATTTCAATTTTACGTTAAATTATTCTATATATCAAATTCAAGTGAATTTCGATGATCTTTCCAGCCAGCTGAGGTCGGGATTACGTCTATCTCCTTATGAGGTCCGCAATCTTCCTTACTATCTTTATTCCCATTATTTACATGACTCAGAGAGCTACTCATGGAAGCAACTTTAAACTTCACGAAGTATTGGCTTTGAGTTAAAATGCATAAAGAAAATTAATAGCTAGATTCATGGATGATGAAACTATATTCACTCTCTTGGTTGTTGAATATTCTGATGTATATTGTTTTTAATTGTGTAGATTTGACTGACAGTGTTTTATTTGATGCAGAATTTATATGTTAGCCTATCGAACGAGAGAGGTTCTACAATTGATGCACCCACTGTTGTACAATCATCTGTCCTGATGGCAATTGGGACTAATTTATCTTCATCGAAACAAAGGCTGAAACAGTTGGCTCATACCATCACAAATTCTCATTCAGGAAACCTTGGCCTGAACAACACCGTATTTGGTAAGGTCAAGCAGGTGCGTCTTTCATTTCTAAACCACTCTCTTGGTGGTGGTGGAAATGCACGGTCGCCTTCACCTGCACCTCTGCCTCATTCCCACCACCACCGTCATCATCACCACCACCATCATCACCATCATCACCACCACCACCACCATCATCACCACCACCACCACCGGGACGCTGCATATTCACCAAGTCCTGGAACAGAGGAGCACAAACATGCACCGAAGAACGGGGTCTCATCTGCTCCCGAAGCTGGTTCTTCCCCAATGGAAGGTCCAACTTCAAGAAAAAGAAACTATGAAGCAACCCCACCTGCTTTTCGTTATGGATATAAAAGGTCGTTAACAAAACTCAGGAAACATAATTTAGGCCCCATTCCTTCTCCAAGCAGTTCTCCGTCGTCGCCATACTTACGAGTAGGCCAGCCAGCACCCGTTTCTGATTCTATTTCTGCATCTAGTCCACTGTCAGGTGTAGTTTTATCTAATGTACAGCCTCCAAATACAGGCAGTGGACATGCAGAAAATTTTGAAAGAAGTTCCCCTTCAGTCTTACCACCACAATTTTCTTGTGAGTATCTGTCATCCCTTCTTTCTCACATTATTTCACAGCTCATTCTTATTGACTTTCTTTTCCCCAAGAAACTTCTCCTTTTGATTTTTTAACTGTGGTTAGTATGATTGCGGTTGGCCTATAGGGGAATTATATATATGGTTTTAGTTAAGAGTAAGGGTTACCTTATGAGATTGGAGTGTTAGGCATATGTTAATTGAGTTAGATTTGAACCTCTAGCATCTTAGTTTGACTACACCAAGAGTTGTAATGTTGGCAATTTTTGTTTTCTTATTCATGGAGGTAAGATTGATTATGTTGTAATCTAACATGCTCGTTCCCAGCTACTGCAGGTGTTCGTGTTTATACTATTCAATGGACACTTGCGCTATTTCTACTCATATGGCATGTATAACCAAGGAGATAAAACCTACATGTAACATGCATATTTCGGGATGACCTCATAATTCAAATTAGAGTTGCGGTAGCAAGACCGACGCAAAGGCGTGCTCCTGCTAGAGTTGATAAAATGATGTTTCCATGTATGTAAATACCAGATGAAGGAAGTTGGGAGATGCATTTTTCTAGGTCAAAGTCACAGAGGTGGCAGGCCTTTTGTAATTGTGTATTGTGTTTGTCTTCTCCACAAAATGTGAGGAGGGAAGAAATCAGCTAAATGCGTCTCATTTTGTTTTGTTCTCTACTTATAATTGTTATTAAGGTCAATCAAGCAATTACAATTTTTTTACAATGCACAAAAAAGCCTCATTTAAGCTACTTAGTTTCTTAGTATGTGGTCTTTTTTTATTCATTTTATTTTCATAATAAT ATGGCAATTGGGACTAATTTATCTTCATCGAAACAAAGGCTGAAACAGTTGGCTCATACCATCACAAATTCTCATTCAGGAAACCTTGGCCTGAACAACACCGTATTTGGTAAGGTCAAGCAGGTGCGTCTTTCATTTCTAAACCACTCTCTTGGTGGTGGTGGAAATGCACGGTCGCCTTCACCTGCACCTCTGCCTCATTCCCACCACCACCGTCATCATCACCACCACCATCATCACCATCATCACCACCACCACCACCATCATCACCACCACCACCACCGGGACGCTGCATATTCACCAAGTCCTGGAACAGAGGAGCACAAACATGCACCGAAGAACGGGGTCTCATCTGCTCCCGAAGCTGGTTCTTCCCCAATGGAAGGTCCAACTTCAAGAAAAAGAAACTATGAAGCAACCCCACCTGCTTTTCGTTATGGATATAAAAGGTCGTTAACAAAACTCAGGAAACATAATTTAGGCCCCATTCCTTCTCCAAGCAGTTCTCCGTCGTCGCCATACTTACGAGTAGGCCAGCCAGCACCCGTTTCTGATTCTATTTCTGCATCTAGTCCACTGTCAGGTGTAGTTTTATCTAATGTACAGCCTCCAAATACAGGCAGTGGACATGCAGAAAATTTTGAAAGAAGTTCCCCTTCAGTCTTACCACCACAATTTTCTTGTGAGTATCTGTCATCCCTTCTTTCTCACATTATTTCACAGCTCATTCTTATTGACTTTCTTTTCCCCAAGAAACTTCTCCTTTTGATTTTTTAA MAIGTNLSSSKQRLKQLAHTITNSHSGNLGLNNTVFGKVKQVRLSFLNHSLGGGGNARSPSPAPLPHSHHHRHHHHHHHHHHHHHHHHHHHHHHRDAAYSPSPGTEEHKHAPKNGVSSAPEAGSSPMEGPTSRKRNYEATPPAFRYGYKRSLTKLRKHNLGPIPSPSSSPSSPYLRVGQPAPVSDSISASSPLSGVVLSNVQPPNTGSGHAENFERSSPSVLPPQFSCEYLSSLLSHIISQLILIDFLFPKKLLLLIF Homology
BLAST of Cucsat.G12674.T6 vs. NCBI nr
Match: KAA0053895.1 (Filamentous hemagglutinin [Cucumis melo var. makuwa]) HSP 1 Score: 422 bits (1084), Expect = 8.49e-143 Identity = 241/263 (91.63%), Postives = 246/263 (93.54%), Query Frame = 0
BLAST of Cucsat.G12674.T6 vs. NCBI nr
Match: XP_004136773.3 (uncharacterized protein LOC101213172 isoform X1 [Cucumis sativus] >KGN59579.2 hypothetical protein Csa_001226 [Cucumis sativus]) HSP 1 Score: 417 bits (1072), Expect = 1.52e-141 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of Cucsat.G12674.T6 vs. NCBI nr
Match: XP_008443610.1 (PREDICTED: uncharacterized protein LOC103487165 [Cucumis melo]) HSP 1 Score: 380 bits (977), Expect = 8.09e-127 Identity = 219/253 (86.56%), Postives = 221/253 (87.35%), Query Frame = 0
BLAST of Cucsat.G12674.T6 vs. NCBI nr
Match: TYK25511.1 (Filamentous hemagglutinin [Cucumis melo var. makuwa]) HSP 1 Score: 356 bits (914), Expect = 4.14e-118 Identity = 201/258 (77.91%), Postives = 204/258 (79.07%), Query Frame = 0
BLAST of Cucsat.G12674.T6 vs. NCBI nr
Match: XP_031738527.1 (uncharacterized protein LOC101213172 isoform X2 [Cucumis sativus]) HSP 1 Score: 321 bits (823), Expect = 3.38e-104 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of Cucsat.G12674.T6 vs. ExPASy TrEMBL
Match: A0A5A7UJM2 (Filamentous hemagglutinin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002890 PE=4 SV=1) HSP 1 Score: 422 bits (1084), Expect = 4.11e-143 Identity = 241/263 (91.63%), Postives = 246/263 (93.54%), Query Frame = 0
BLAST of Cucsat.G12674.T6 vs. ExPASy TrEMBL
Match: A0A0A0LHD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G819880 PE=4 SV=1) HSP 1 Score: 404 bits (1037), Expect = 1.14e-136 Identity = 219/227 (96.48%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of Cucsat.G12674.T6 vs. ExPASy TrEMBL
Match: A0A1S3B8E9 (uncharacterized protein LOC103487165 OS=Cucumis melo OX=3656 GN=LOC103487165 PE=4 SV=1) HSP 1 Score: 380 bits (977), Expect = 3.92e-127 Identity = 219/253 (86.56%), Postives = 221/253 (87.35%), Query Frame = 0
BLAST of Cucsat.G12674.T6 vs. ExPASy TrEMBL
Match: A0A5D3DPD6 (Filamentous hemagglutinin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006610 PE=4 SV=1) HSP 1 Score: 356 bits (914), Expect = 2.00e-118 Identity = 201/258 (77.91%), Postives = 204/258 (79.07%), Query Frame = 0
BLAST of Cucsat.G12674.T6 vs. ExPASy TrEMBL
Match: A0A6J1D227 (E3 ubiquitin-protein ligase arkadia-C-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016642 PE=4 SV=1) HSP 1 Score: 303 bits (775), Expect = 2.10e-98 Identity = 180/228 (78.95%), Postives = 195/228 (85.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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