Cucsat.G12337.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGATCTCTTCTAGTTGAAATACATCATGGGTTTTGCTTTGTTTTCTGTTTGCTTATTAGGGTTTGCTTGATCTATGCATGTTGTTTTTTTTCTCTTTTCCCTTTTCTCTGTTTTCAAGTTTGTGGAATCTTTTTTCTTCCTGGATTTTTTATTTTTGTGTCTCATTTTGTCTTAAGCTCTTTGGAAATCGAATCTGGGTTATCTTGGATTTAGGTTTCCTTTTTCTGTTTGGTGAAGACGGTGGAGCCTCTTCCGTTGGTGGTGGTTTTCCAGATTTCTGTCTTGGCCGATCGTATTATAAGGGTTGGGTTTTAGCTAGGGTTTCTTTTTTTCTATGATTCTGTTTTTGCTTTTTGGGTTTTGATTAGCTATTGAAGCTCTAGGAAACGGCATTAGGGTTGGATGTTAAGATACCTTATATGTTTGCCCCCTTTCGATTGAAAATTTTCAAGTCAAGATGTTATTTTTGCTGTTTGGGCTGTAGAACAACATGATACTTGTTGAATTTGCTCTCAGGAAGGTGTATTATTATTATTATTTTGTTCTTTTGGAGCAAGAGTTCTGTTGAAATATCTGTTAAATGTTGTGTAAAGACTTTTGTCTTTTTGGAGCTACTAGCTGAGCTTCATCCTTTGGTGTTTTTTCACTTTCCTTTTACATTATCCTTTGTTTTGCGACAGAAATTTCTTTGAATCCTTTTATATTTGTAGACTTGTTTATGCTCTATTATGTTATTTTCCACTATTTGCTTCTTCTTACATTTTTACCAACTGTTGCAGGTTGGTTACTTCTTTAGATAAGTGACTGTATTCAGAGTTAAGAACGTGAAGTTTGAAGCATATTTGCTGCTTATACATCTTGAAGCAAATGACATCAGTAAGCGTAGCTCCAGCTTCTATGATAAGGGATCATGGTGGGAGCACAATCGGTGTTGACCGGCTGCCTGATGAGATGAATGATATGAAAATTAGGGATGATAAGGTACCTAAGATGTTGTTTAGTTTTTTCCTTCCATGGCGCTAGTTAACAATACATTTCTTCTAACCTATAATTGGATGGAACAGGAAATTGAAGCCACCGTTGTTGATGGAAACGGTACTGAAACGGGCCATATAATTGTAACGACCATTGGTGGAAAGAATGGCCAACCAAAACAGGTGATTGTCAAAAAACTTATTCTCGAGACTACCGTTATTTAACTTCTTTCCTGACACCTCTTTTAAAACTTGTTTTAGACTATCAGTTACATGGCTGAGCGTGCTGTTGGACATGGTTCTTTTGGAGTTGTATTTCAGGTATGTTGCTCAGAGCTTAAAAGCTTTTCGATTAGTAGTGAGCATGCTAAGAGTAGAGGACATTTCATCCTTTTAATTTTTTAAGAAACAAGATATATTATCAATGTTATTTTGCAGGCAAAATGCTTGGAAACTGGTGAAACAGTTGCGATAAAAAAGGTTCTTCAGGACAAGAGGTATAAGAATAGGGAGTTGCAGACTATGCGTCTTCTAGACCACCCAAATGTCGTGTCCCTGAAGCATTGTTTCTTCTCAACGACAGAGAAGGATGAGCTTTATCTTAATCTTGTTCTTGAATATGTCCCTGAAACTGTTCATAGAGTGATCAAACATTACAACAAGATGAACCAAAGGATGCCACTGATTTACGTCAAACTCTATTTTTATCAGGTTTTTGCCGAACAGCCCTCTTCATTTTTGTGTATGGATAGTGAAGTTTTGTATTGAATCATATGCATATAAACTACTATATTTAAGATGAACGGGCCTTTCGAGAACATCTTTCTGTGCCTGGTTTTAATATTCTTTGTTTTCTTACTTTCGTTTCTACACAGATCTGCAGAGCTCTTTCATACATTCATAATAGTATTGGGGTATGCCACAGAGACATAAAGCCTCAAAAACTTACTGGTTAGTGTTCATTCTGTTTCTGGCGTCGATTAATATTTCGATAAGTAACTTGATTTTATATTTCAAATCCACAGATTTAATTGGTTTCCATTTCTGTCTGCTGATTGTTTTCACTTTCTCCTTTTGACAGGTTAATCCACACACCCACCAACTCAAGCTTTGTGACTTTGGCAGCGCAAAAGTCTTGGTTCGTTTTCTTTGAATTTTGGAAAATGTTCATTTTGTTTTGTGGTTCTACTTGTGACGTGGAGACTAATTTAGTTTACATATGGCAGGTTAGAGGCGAGCCAAATATAGCTTACATCTGTTCTAGATACTATAGAGCACCCGAACTCATATTTGGTGCGACCGAGTACACCACAGCCATCGACATCTGGTCAGCTGGTTGTGTTCTAGCTGAATTATTGCTTGGACAGGTTTGTAAAATTCCTCCCATGACCGCTGCATAACTATTATTACTATTAAGTAGAAACGATTCTAATAAGCGTTCTTGGACTCTTTCAGCCGCTATTTCCCGGTGAAAGTGGAGTTGATCAGCTTGTTGAGATAATCAAGGTATTAGGAGCTTTAATTTAATTTTTAAAGAGCTGTGAAGGTTTTCTTTGTTGGCAGTCTTTTCTATTCTTATTTTGATCCGACTTCAATGTTTAATTTGACAACTCTTGCAGGTTCTAGGAACCCCAACCAGGGAGGAAATTAAGTGCATGAACCCTAATTACACAGAATTCAAGTTTCCCCAAATTAAAGCTCATCCATGGCACAAGGTACTTAAAAAATCTTTGTACATATATGTTCCCTGTTCCTCCTTTTAAGTAATTTACCAATTTAACAGTGCATACATCCATGTTATCAGATATTCCATAAGAGAATGCCTCCAGAAGCTGTGGATCTCGTTTCAAGATTACTTCAGTACTCTCCAAACCTCCGAAGCACAGCGGTAAGTAGAAATATTTTAAAATTTCAGTCAACACTTGAATGCGGATACCCATTCGAGTCTCTGACTAATTTCTCTTCCACATTAATGCAGTTGGAGGCTTTGATTCATCCATTTTTTGATGAACTCCGTGACCCAAACACTCGTCTGCCAAACGGACGTTTCCTTCCTCCCTTATTCAACTTCAAGGCTCATGGTAAAAACCTCAAATTACTTGAGAACTACTGGTCCATCAGCTGTGATATATATGCCTAACTTTAGTTTATTTCAATTGTGTTGCCAACCAGAATTGAAGGGAGTACCCCCTGAGATGCTCGTGAGGCTTATTCCAGAACACGCAAGGAAACAATGCAATTTTCTTGGGTCGTAAAGCGGTCGGGTAGTAGTCTAAACGCTGCAGTGACACATAAGCCTGTAGAAAGTAGTAGCTAGCATAAAATTACAAATGGAAGCCCCTATTATTTGTTATTTTCTTCCCTGTTTAATTTGTTCCCATTCCCCTATTATTTTTTCATATCCATGGCCGCCGCCCCTTGTTTGTCCGTGTAGAAATCAAGTTGAGAGATGGTTCTGCTTGGTATGTTCTTAATACCCGCCCTTGATTTGTAGTTAACAGACAGATTGTAATTCCTTGTTGCAAATGAACATAACCTTGGAATATGCTCAGCAGCAATTTTGCCACTTCAATTACCATGTCATCAAGATTTGTGTACTGATGCCGCGAAATTCTTTATTGGTGGATGTTGAGCCAACTCCAATAACTTCAACTTTTCTGGTTTTCTAAGTTCTATTTTCCTCTTTTTGCGACTGAATTATTGTAGAACAAATCAAATCAGTACTTATTGCAGTACTAGAAATTTTTTCTAAATGAGGTATCATTTATTCAAGGAACCTTGATGGATGTTATTAGAGTAAGGAAATGTCAAAAGGTTGTCGGGGT ATGACATCAGTAAGCGTAGCTCCAGCTTCTATGATAAGGGATCATGGTGGGAGCACAATCGGTGTTGACCGGCTGCCTGATGAGATGAATGATATGAAAATTAGGGATGATAAGGAAATTGAAGCCACCGTTGTTGATGGAAACGGTACTGAAACGGGCCATATAATTGTAACGACCATTGGTGGAAAGAATGGCCAACCAAAACAGACTATCAGTTACATGGCTGAGCGTGCTGTTGGACATGGTTCTTTTGGAGTTGTATTTCAGGCAAAATGCTTGGAAACTGGTGAAACAGTTGCGATAAAAAAGGTTCTTCAGGACAAGAGGTATAAGAATAGGGAGTTGCAGACTATGCGTCTTCTAGACCACCCAAATGTCGTGTCCCTGAAGCATTGTTTCTTCTCAACGACAGAGAAGGATGAGCTTTATCTTAATCTTGTTCTTGAATATGTCCCTGAAACTGTTCATAGAGTGATCAAACATTACAACAAGATGAACCAAAGGATGCCACTGATTTACGTCAAACTCTATTTTTATCAGATCTGCAGAGCTCTTTCATACATTCATAATAGTATTGGGGTATGCCACAGAGACATAAAGCCTCAAAAACTTACTGGTTAA MTSVSVAPASMIRDHGGSTIGVDRLPDEMNDMKIRDDKEIEATVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERAVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKMNQRMPLIYVKLYFYQICRALSYIHNSIGVCHRDIKPQKLTG Homology
BLAST of Cucsat.G12337.T4 vs. ExPASy Swiss-Prot
Match: P51139 (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa OX=3879 GN=MSK-3 PE=2 SV=2) HSP 1 Score: 364.4 bits (934), Expect = 8.6e-100 Identity = 181/205 (88.29%), Postives = 191/205 (93.17%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. ExPASy Swiss-Prot
Match: P43288 (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana OX=3702 GN=ASK1 PE=1 SV=3) HSP 1 Score: 357.8 bits (917), Expect = 8.0e-98 Identity = 179/204 (87.75%), Postives = 187/204 (91.67%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. ExPASy Swiss-Prot
Match: Q40518 (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum OX=4097 GN=NTK-1 PE=2 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 1.0e-97 Identity = 175/204 (85.78%), Postives = 189/204 (92.65%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. ExPASy Swiss-Prot
Match: P51137 (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa OX=3879 GN=MSK-1 PE=2 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 4.4e-96 Identity = 179/206 (86.89%), Postives = 188/206 (91.26%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. ExPASy Swiss-Prot
Match: P43289 (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana OX=3702 GN=ASK3 PE=1 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 7.5e-96 Identity = 170/204 (83.33%), Postives = 186/204 (91.18%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. NCBI nr
Match: XP_004148581.1 (glycogen synthase kinase-3 homolog MsK-3 [Cucumis sativus] >KAE8650916.1 hypothetical protein Csa_001894 [Cucumis sativus]) HSP 1 Score: 411 bits (1056), Expect = 1.38e-141 Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. NCBI nr
Match: KAA0038106.1 (glycogen synthase kinase-3-like protein MsK-3 [Cucumis melo var. makuwa] >TYK20502.1 glycogen synthase kinase-3-like protein MsK-3 [Cucumis melo var. makuwa]) HSP 1 Score: 409 bits (1052), Expect = 5.60e-141 Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. NCBI nr
Match: XP_038905663.1 (glycogen synthase kinase-3 homolog MsK-3 isoform X2 [Benincasa hispida]) HSP 1 Score: 408 bits (1048), Expect = 2.27e-140 Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. NCBI nr
Match: XP_038905662.1 (glycogen synthase kinase-3 homolog MsK-3 isoform X1 [Benincasa hispida]) HSP 1 Score: 408 bits (1048), Expect = 6.20e-140 Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. NCBI nr
Match: XP_022983441.1 (glycogen synthase kinase-3 homolog MsK-3-like [Cucurbita maxima]) HSP 1 Score: 402 bits (1033), Expect = 4.32e-138 Identity = 197/204 (96.57%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. ExPASy TrEMBL
Match: A0A5D3DAA6 (Non-specific serine/threonine protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00760 PE=3 SV=1) HSP 1 Score: 409 bits (1052), Expect = 2.71e-141 Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. ExPASy TrEMBL
Match: A0A6J1J277 (Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111482043 PE=3 SV=1) HSP 1 Score: 402 bits (1033), Expect = 2.09e-138 Identity = 197/204 (96.57%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. ExPASy TrEMBL
Match: A0A6J1FAG2 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111442293 PE=3 SV=1) HSP 1 Score: 402 bits (1033), Expect = 2.09e-138 Identity = 197/204 (96.57%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. ExPASy TrEMBL
Match: A0A6J1DLW7 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111022381 PE=3 SV=1) HSP 1 Score: 400 bits (1027), Expect = 1.70e-137 Identity = 196/204 (96.08%), Postives = 200/204 (98.04%), Query Frame = 0
BLAST of Cucsat.G12337.T4 vs. ExPASy TrEMBL
Match: A0A6J1GBR5 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111452723 PE=3 SV=1) HSP 1 Score: 399 bits (1025), Expect = 3.43e-137 Identity = 196/204 (96.08%), Postives = 199/204 (97.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|