Cucsat.G12138.T8 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12138.T8
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	nucleolin 1 isoform X1
Location	ctg1837: 938662 .. 947197 (-)
RNA-Seq Expression	Cucsat.G12138.T8
Synteny	Cucsat.G12138.T8

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTAAACCCTTCCGTTTCTCAAATTTCATTTTCATTTTTTGTTTCTCGTTCATCTCAAATCCCTCTCCCTCAGGCCTCAGCCATGTGCTCTGATAAAATCCGTTCTGGGGTTTAATTTCCATCCGCTTCCATTAGTTAATCGCTCCGTCGAGTTTTCACAAGGAGTCGGTGTGGAACCAGCTAGGGTTCATGGAGGCTCCTTATTTGAGGGTTTCAATATCAATTGAACTCCGTTGTTAGTGAGCCTGTTTCTTCTTCTGTATATTCAAGTTTCGTGAAATGAACTCGTCGGAGATGGGGAGTGAGGATCGTGTCGATGATCGTACGTTCAAGGTTGATTTTACTGGCGACGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGTACGGACTACTCTAGCCTTTTAACATTCACGTACCTGAGTGGTTTTTGCCAACCAATGAGATGTCTGGGTGTCTTACAATTTCTCTTAGGTTATTCATGTGGAGGCCATCATCTTCTTCTTAACTGGTTGTTGAGGAATTTGTTTCGTTAAAGAAATGGGAATTTAGTATTCGCGGGTTGTTATATATTTGCTATTGCCCAATGGAAATAACATATAGTTCTGATTCTTTTATCTGTAAGTAATTACGTGCCTTAGGGGAAGTTTCTCTTATCTACTAAGGAATTCGCCCAAGGTTTATGGTTGATGTTAATGAGATGTAATCCAACTCAATGCCCATATATTGTTCTTCATCCAAAGCAAACTGCATCTTATAGCCTATTTAAAAATTTGGTTAGCCGTTATACTGTTTATCTGTCCGCCCCTCTTTCAGAAAACCTCTCTGTGCTAGGTGAACTTGCAACTGAGATAATTCCTTTAGCCTTTGATTGGCGGCTGTTCCCATTTCCCATCGATAAGATATAAGTACATTGAATTATTGAAATGTATAAAAAAGGAAGATTCTAATTAGCAAACAAATATTAGTGAAGTTACAGAATAGCATATAATTATAACCCAAATGTGATGATTAAAATAATGTCTCCTAAATCAGCTAAGAAGAGTTGTTACTAACCTTGTAGAGGCAAGAGATTGAGATTGATTGATTGGATGAAAACATGTCGTGCTCTTTGTATTTGGACTAGACTTTTCTGTTGAGGGTGTATCGATAATATTATTGTGAAGAAAGATCTTGGAGTGCTTGTAATATCTTACATGAGGGTGTTTCAAGAGTTGTAAAAGAATTTAGTGGCAAATCCATTGTGTTTTTTTATCTACTCCCAAAATATAAGATAGCTTTTATAACTTTCTCAACCCTAAAGTTAGCTTCTATCTTAACCAAATCGGTCTTGGGCGGACTTAGGTTGGGATCTGATCTGAAGTGGTTGGCTTAAATTTTACCACCTCTTTCTTTGTGTATGGATACTGTAGAAGGCAGGAATTGCCTTTTGCATGTGTGTGGAAAGAGATATCGTTATACTCTCCTTCCCTTCTTGATATGTCTCCTCCTGCATACTATGTGATTTGTATCTTCACATCCAAAAAAATTCTTTCCAAATTGGATATCTGAGTTGGTATTTGAGATTAGTTTTAGAATATTGGTAGCTTAAAGTAGGGAAAAGTTTTGCAAGTGGTCTAGAGCTTTGGGATCAACACGAACCTCAGCTTTTTTGAAGGTTTCATCTTTTCAGCAAGCTTTACATCTTCTTTAATTTGCAAAGGTTAAGTGGAGTTCCACCAACTTTTGAAAGTCTTTTGAGAATTGTTGTTCTTGAGCCTCATATTTATATATTTTAAGGACAGGATCCCGTTTGATGCCAGAAGATTCTAGAAGGGTTAATTGGTTGTTAGAGGAGGTGTTTTAACTCTAGAATTTGAGATTTTGAGGAACCAATCATGGGGTACTAGAATTTACTAACGATGAACAAAAGAAGCCATGTTGGATCAAGTTAACTTGGCTCTTCTACAAGGGAAGGATATCACTTTTGGCAGGGCTTTTGGAGATCAATTTTTTCGTCTCTTCTAGAAGAAGCAAAAAATAGCAGAGGAGAACATAATGCTTTAAGAGAAAGCTCAGCCATAACAAGGTTCCCAAGATTTTCCAATTTTCTCAAAAAAGAAAACTTGACTGGGGCAACTTGACCAACATTTTTGTTTTATCACTGAGCTATAACTGTTATGGAAGCCATGGAATCCAATTTTTGAAGTCTTGTGAAATCTTCCATGGATGAAAAAGTGCTTACGGAAGAATCAAGACTCCATTAGTTCAGGGACACATAATTTTTATCCATCTTTCATATGAAAGGGATGATAAATTCCTAGAATGCTTGATGGAGTCCAGCCTTCTCTTAGGCGGAGGAGTCTAATTTGGTTCATTCTGCTTGATCTGAGGATTGCTGTATTACATGGACTGGTTGTGGCTATTAGCTCTTGGAGAGTCGTGGGATTTCTGTACTAGTTGTTCCTTTAGAGTTTTCTTCAAACCACACTGGAGACATTCTTCTTTTGAAGATTGCATTTCCTTCGAACTCATTCTTCCAATTTTCATGTTCTTAAATCCCTTCCTTCTCAGAAAAAGTTCTATGAACATGTTTTCATCTTTTTGGAATTTGAGAGGCTTTTACTTGCTGTCTTGTGCACTTCTGAGTCATCCTAAGTAGAAGGCATTATTTAATATAATGGACATCAATGGGATCCAGTGGAGTTAGATATCTCCACAAAAAGTACCAATTTTTTTTTTTTTTTGAAATCTTAGAGCTCTTTACTTGCTGTCTAGTGCACTCTTGAGTCACGTTAAATAAAAGATGTTATAATTTACCGTAGGTATCTTTGAGGTATTTGAAGGCTTTCAAATGCTGTGAATACTAGGTGAATTAGTTCATTCTGTTGTCTTGTTGCTAGATAAAGAAAGGTAATTGGAAAACGAGTTTATAATTGTCTGGGGAACTTTTTCCTCTATTTCTGGTTCCCCTGCCTTTACCATTCGTTTTCTTTCAAAAATTGTTTTGTGGCCTCTATTCTCTTGCCATTTGGGAGTTCCTCGTCTGTCTCTCTTGGACTCAGTTGTTCCCCATCTGATACAGAAGCTATCTGCCATTTGGGAGTTCCTCGTCTGTCTCTTGGACTCTTGGAATCTTCAGATATTACTGCTCTTCTAACCTTAATTGGTGATTTTGTTGTTTGGGAGGGGAGAAGCTATCTTCGTTTGTGTCGCCTATTCCCTTTGGGTGGGTTTTCCTGTAGTTCTTCGTTTTATTGTCAGCTGAATTCTATGTCTTTAAGTCCTACTACCTTCTCACTTTTTTGGAAGATCATTGTCACAAAGAAGGCTAACTTTTTGTGATGTAGATAGCTTAGTATGGTTACTATTATGGATCGTGTTTGTAAGTTTGTGCCTAAAATCGGGGCCGTCTGGCCCAACGTTACAAATGGGACTACCTGAGGACTTGGATCATCTTCACGTGGTCCTGTTTGTTTGCAAGATTGTTTTAGAGCAGCATTTTTGAGTCATTCTTCTTCAGGTTTGCTTAGTGGAGAACTTGCAGTTCCATGTGCGAGGAGTTGCTCCCCCTGTCCTCTTTTCGTGAAAAAGGGTCTCTTGTTGTGGTTTGCATGTCTATTATGCTATTGTTTGGAGAGTTTGGATGGAAAGGAATAATACAATTTTAAGTAGAGTGGAGCAATCTGTGGGCGAGTTGTGGTCCCTATTAGGTTGCATAGACTTTCAAATGCTGCAAAAACTTTTTGTTTGTAAAGACTTTTGCAATTATCCTTCTTGTTTCATTTTGTTTGACTGGAGCCCACTTAGAGTAGTTGGGATCTGATCTGGGGTTTTGTTGTATTTTTCATGTATTCTTACATTTTTGTCAATAAAATCTCGGGTTTTTTATATTAATTAAAAAAAGTAGTCCATAGAGCTGAATGCTTGGAAAATTATTTTGAGATGTTGGCATTGTTTAGCCTTTGAATATCTTTTTTTCCATTCTCAGGCAGTGCTGTATGAGATTGTGGAAACTTTCTTATCTGCGTTTCTATTTAATTTGGCTTTATACTTCTGTACTTTTTATATACTTGTTTGTTTCTAAAATTGTGTCCATGTTTCAATTTTTCTATATTTATCATAACATGGTTTGAATTTACTTCACAAACTGGGATTTAGAGCGTTTGTTTGAAGAAATCAGATTTGATGAAATATAATGAATGTTATTTGGTAGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAGAGAAGAAGCACAGAATGAACTTAATGTCTTTTTGGCAGACGATAGTCATTCATTTGTATCTTGGTAATTTGATTCTCATCCCTCTTGTTCGTATTTGTAATTTGTGTAGTAAGTTGTGTTGATTCATTCTTGCAGTCAGTTGACTAATTGTTTTAAGCTTCATTTCAATAGGTTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGAGCCGCCTGCTAAAGCTTCTGCCAATGAGGTGCCCACACAAAAGTCTCCAGTAGCAGAACCAGATACAAGAAATAATTCTCACAATCTGGAGTCTGATTCTGAAAGAGGGAAGACTGAAAAATTGTCTAGCAGACGACGTACTAGGGAATGGAGAGGAATTGCTAATGAGGAAACCCGTGTAGTTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTGGTCATAGGAAAAGGAGCCGGCCTGACGATCATCAAGGCACTGAGGTACTTTTCTAATTTTGTACTAGCCACAGTTAACTGGGTTTTAAAATGTGAACTTTTTCTGGGAGGGGGAACCACCGGCCCCTAGGCCATATTATCTTCCTGGTTGTGAATGTATTCCTTTTGTTGTTTCCTATTAAAGTGAAAATTGATTTTTTTTTCCTTTTCCTTTTTGATAAAGCTAAATTTAAATTGGTGAAAGGCAATGGGTAGTGGAGGGTTAGCTGAACAATTTCTTGTTGTTTCTCAGTTTTCAATACAATAGATTTGAAATCTTTAAAACCCACAATTTTTTGTTGAGAACTGCATATCTTTATGTATTTAAAATTTTTAGTATCTCAGTTTAAATAAAGTCCTCAATTATGGTGTCTAAACCTATCTCCTTCATGTGCATGTCTTGTCTTTTTTCCGTCTTTGAACGAACTTTTAATTTCTTCTCCTTGCCATGCCGATATGCTTATGTTTTTCTTAAATCCAAGTTTTTCTTAATGCAATACAACTTTATTGTAATGCACCTTTAGGTGCCTTGGGAGCTTTCTCCTTCCATTTCGTTTATCAATGAAATTGTTTCCCAATCCAAAAGAAAGGTATGCTTGATTAAATTTTACAATTGCTGTACTAAACTACCTTAGTTTCTGGTACTTTTAGTAATTGAAAATAACTTAATCCGGAATATTGGATGGTTTATTGATATGCATTTATTCTAATGGGAAATAAATTCTCACGTATCTTGTTTTACAGAGGGAAGCTGCCTTTCAGGTAAGCATTGCTGCCCCTCGACGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAGGCCCTCTAATGCATCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTCCTAGGAGGCTTCAATCTGTTGCAAAAGTTCCAAATCCAATGGCAACTGTCATCAAGGCTGTGACGGAGGCATCTGAAGATGTGGTCAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGTCTAGTGGCCGACCTTCAGAATATGGAGCAACTTTTGTAGAGAACGATGAATATGGGGATATGAATCATTCAGAGGATCGACCATACTCAGCTACCTATCTTGAGAGAGGCAATTATATTGGGAAATATTCTCGTGATGAGCCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAATGAAGATGTTAATATTCAGGGCCACAGAGTATTTGATGATTCTTGGACTGCCGAATCAGGAGTAAGAAAGGGAAGCAATTTACGGACTGTGGCATTCAGGGCAGTTGAGAATTCTGATGATGAACGTGTGGCACAATATACACAGAAGGATCAACCTTCGTTAGCTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGACCAAGGGCAAATTCCTGAACTTGCTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAGGGTACCAGATCGGCTGTGCAAGTTATGGAGAATGGCGAGCCAGTGACCCTTGTTAACCAACGGAAAACACCAGCATCTAACCTTCAAGAAGAGTTCCAGAAACCTCCTTTATCTGCTAATGGTGAGCTCCCTTTTCTGGTGTCTGGCTTTCTGTTTAAATAATAGTTTCCTTGCACGACTCTTTTGTTTATCTCTTTCTCGTTCTATTTTTCCCGTATTTGATCATCAATAATCTGTTTGGGCTCATAATTTATTATTCCCTAGTTAGTAATTCATTTTAAGTAACTTTCTCATGTTACCTAATGCAGGCCAATTTGCTGGCACTCGTCCTTTAGAGGAAGCTGATGCTCGAACCATTTTTGTGAGCAATGTAAGAAGTCACTCATTTTTTGCTTGTCTGAAGAAACTGGCAACTATATACCAACCATCTTACGTTGATTTTTTACATACAGGTTCACTTTGCTGCAACGAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTTTAAAAGTCATCATAGTAACCGATGCAACCACTGGGCAACCCAAAGGGTGAGGTGTTTCATTTCTTTATTGTACCTCAGCTATCTTTAATCTCTTTTTGTTTCCTCTACTGGAGACTACAAAGTTTCCTATGTTACGTTTTAATAAATTGAGCATGTGATTGGAGCAGGTCAGCTTATGTGGAGTTCATGAGAAAAGAATCTGCAGAGAATGCGTTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTAAAGGTATCCGTCATATTTTTAACATTTTTCTTTGTAGTATGAAGCATTACTCCAAAAAGAAGTGTTGGCAAACTTAACCTTTGTTTTTTTTCCTGCTTTTTCTTTACTTCAAGTTAGCATTCGTACCTTTAATATGCTCTTCTTTTTTTGGTTAGGAAGTTGTGTGGGAACCTGACATTCTTTCTTTTTTAAAAAAATGGATTTTTGTTCAAGGTTTTGGTTGCTTTTCGCATAATCATTGAATTTTTGCTGTTGTTTCCATACCTAACTAAGCAGTGAGCAAAAGTTAAATAAAGTTTCTCGTAAATCTTAAAATGAAAATGGATCTTGAAGCAAACATAAAAGATGTAATTTTTTTCACTTTTGGGCTTTGGTCAACTTGTTTCAACAAGTTTCTTCCGCTGGTATTATTATTTGAACATCTTAATCGTGATGCAAAAACCATGCCACGTGACAACACAACTAGCATGATATGTTTTAGTCAAGTAGCGCACATGTATCAGATTGATTAGAACGAACATTTTGTTGAGGTGTCTGCTGCATTATGTATGTAGTCAACAAATGAAGCTGCAAGTTTGATTGATTAGTCAATTGCAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTATCTGGCCTCGTGCTGTGCGAGGCTCGCCGTTTCCTACTTCGAGATTTACCAGAGCTCCATTCATGAGGGGTGTCCCTGGTGGATTTAGGGCTCGTCCCCCGATGAAACTCAGGGCCAGGAGCATGCAGTGGAAGCGTGATAATCAGACCACAACTGCTGACAATGGTGCATCTCTCTCTGGTAATTCTATTCCCTCACCTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGTGGACAAGTAGGAACCACTCGATTGTGAGAAAATTATTTTGCGGAAAGAAAATCACGCAGGTTCTCCCAAAATTTGTTTGTGTTTTGGTGATTCATGATTTTTTGTGCATCAGTGGAGGAGTTTGAGAAAGAAGACTCCAAGTGGGGAAGTTTTAGCAGCAGTTTGTAGGAGGGTTTTTTTTTGTTTTCCTTTTTGTTTCCATTGGGGAATGGAAATTGGTGAGTTTTATAGGTAGGAAGAAACTGATGATGGCGGTTCGGATAAATTCATAATTTTTCTCCCCCTTCCAATTCAGAAATTCTTATTCAGCTTCTAGATTAAAGTTTGTGAATAGAGTAAGAATAGAGACCTTTTCTTTTACTTTTTTTCTTCTTCTTTTTTTTTTCCCCCTTTCATTTTGTTTTAAGAGATATTGTGATATTTTGTAACTTTTATTAATGTTGTGACAGAGGAGAGAAGGAAAAGAGGAAGAATACGAGTTATATGAAAAGAAAAAAATGAATAAATCTACTTAGTTTGTATATCTGTATGTCTTCTTTGTTCATGTTTTTGTATTGGCAGGACCTTCCA

Coding sequence (CDS)

ATGAACTCGTCGGAGATGGGGAGTGAGGATCGTGTCGATGATCGTACGTTCAAGGTTGATTTTACTGGCGACGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAGAGAAGAAGCACAGAATGAACTTAATGTCTTTTTGGCAGACGATAGTCATTCATTTGTATCTTGGTTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGAGCCGCCTGCTAAAGCTTCTGCCAATGAGGTGCCCACACAAAAGTCTCCAGTAGCAGAACCAGATACAAGAAATAATTCTCACAATCTGGAGTCTGATTCTGAAAGAGGGAAGACTGAAAAATTGTCTAGCAGACGACGTACTAGGGAATGGAGAGGAATTGCTAATGAGGAAACCCGTGTAGTTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTGGTCATAGGAAAAGGAGCCGGCCTGACGATCATCAAGGCACTGAGAGGGAAGCTGCCTTTCAGGTAAGCATTGCTGCCCCTCGACGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAGGCCCTCTAATGCATCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTCCTAGGAGGCTTCAATCTGTTGCAAAAGTTCCAAATCCAATGGCAACTGTCATCAAGGCTGTGACGGAGGCATCTGAAGATGTGGTCAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTCGTGATATGGATTTAACAGAGTCTAGTGGCCGACCTTCAGAATATGGAGCAACTTTTGTAGAGAACGATGAATATGGGGATATGAATCATTCAGAGGATCGACCATACTCAGCTACCTATCTTGAGAGAGGCAATTATATTGGGAAATATTCTCGTGATGAGCCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAATGAAGATGTTAATATTCAGGGCCACAGAGTATTTGATGATTCTTGGACTGCCGAATCAGGAGTAAGAAAGGGAAGCAATTTACGGACTGTGGCATTCAGGGCAGTTGAGAATTCTGATGATGAACGTGTGGCACAATATACACAGAAGGATCAACCTTCGTTAGCTGCAAATTCCTCACGTGACATTGAGAGTGAGTTACAGGGTACCAGATCGGCTGTGCAAGTTATGGAGAATGGCGAGCCAGTGACCCTTGTTAACCAACGGAAAACACCAGCATCTAACCTTCAAGAAGAGTTCCAGAAACCTCCTTTATCTGCTAATGGCCAATTTGCTGGCACTCGTCCTTTAGAGGAAGCTGATGCTCGAACCATTTTTGTGAGCAATGTTCACTTTGCTGCAACGAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTTTAAAAGTCATCATAGTAACCGATGCAACCACTGGGCAACCCAAAGGGTCAGCTTATGTGGAGTTCATGAGAAAAGAATCTGCAGAGAATGCGTTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTAAAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTATCTGGCCTCGTGCTGTGCGAGGCTCGCCGTTTCCTACTTCGAGATTTACCAGAGCTCCATTCATGAGGGGTGTCCCTGGTGGATTTAGGGCTCGTCCCCCGATGAAACTCAGGGCCAGGAGCATGCAGTGGAAGCGTGATAATCAGACCACAACTGCTGACAATGGTGCATCTCTCTCTGGTAATTCTATTCCCTCACCTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGTGGACAAGTAG

Protein sequence

MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDTRNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRKRSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASNSDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSENEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSSRDIESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK

Homology

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy Swiss-Prot
Match: Q28165 (Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 85.1 bits (209), Expect = 3.2e-15
Identity = 66/201 (32.84%), Postives = 98/201 (48.76%), Query Frame = 0


Query: 424 ESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQK------PPLSANGQFAGTRPL 483
           + EL+  ++ V+ ME         +       LQ E +K      PP +A          
Sbjct: 116 DPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEK 175

Query: 484 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 543
            EADAR+I+V NV + AT + L  HF+  G V +V I+ D  +G PKG AY+EF  KES 
Sbjct: 176 MEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESV 235

Query: 544 ENALSLDGTSFMSRILKVVRKNASQLEGASTVI--WPRAVRGSPFPTSRFTRAPFMRGVP 603
             +L+LD + F  R +KV+ K  ++  G ST    +PRA   +       +R+ F     
Sbjct: 236 RTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRARYRARTTNYNSSRSRFY---- 295

Query: 604 GGFRARPPMKL---RARSMQW 614
            GF +RP  ++   RAR+  W
Sbjct: 296 SGFNSRPRGRVYRGRARATSW 302

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 4.1e-15
Identity = 73/226 (32.30%), Postives = 108/226 (47.79%), Query Frame = 0


Query: 396 VENSDDERVAQYTQKDQPSLAANSSRDIESELQGTRSAVQVMENGEPVTLVNQRKTPASN 455
           +E  +DE +    ++++P          + EL+  ++ V+ ME         +       
Sbjct: 83  LEELEDEEL----EEEEPGELTGDQTIEDPELEAIKARVREME---------EEAEKLKE 142

Query: 456 LQEEFQK------PPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 515
           LQ E +K      PP +A           EADAR+I+V NV + AT + L  HF+  G V
Sbjct: 143 LQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSV 202

Query: 516 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 575
            +V I+ D  TG PKG AY+EF  KES   +L+LD + F  R +KVV K  ++  G ST 
Sbjct: 203 NRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTT 262

Query: 576 I--WPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQW 614
              +PRA R     +S  +R+ F  G     R R   + RAR+  W
Sbjct: 263 DRGFPRA-RYRARASSYSSRSRFYSGYTPRPRGR-VYRGRARATSW 292

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy Swiss-Prot
Match: Q7ZXB8 (Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 4.1e-15
Identity = 73/226 (32.30%), Postives = 108/226 (47.79%), Query Frame = 0


Query: 396 VENSDDERVAQYTQKDQPSLAANSSRDIESELQGTRSAVQVMENGEPVTLVNQRKTPASN 455
           +E  +DE +    ++++P          + EL+  ++ V+ ME         +       
Sbjct: 82  LEELEDEEL----EEEEPGELTGDQTIEDPELEAIKARVREME---------EEAEKLKE 141

Query: 456 LQEEFQK------PPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 515
           LQ E +K      PP +A           EADAR+I+V NV + AT + L  HF+  G V
Sbjct: 142 LQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSV 201

Query: 516 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 575
            +V I+ D  TG PKG AY+EF  KES   +L+LD + F  R +KVV K  ++  G ST 
Sbjct: 202 NRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTT 261

Query: 576 I--WPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQW 614
              +PRA R     +S  +R+ F  G     R R   + RAR+  W
Sbjct: 262 DRGFPRA-RYRARASSYSSRSRFYSGYTPRPRGR-VYRGRARATSW 291

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy Swiss-Prot
Match: Q86U42 (Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 84.7 bits (208), Expect = 4.1e-15
Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 0


Query: 409 QKDQPSLAANSSRD---IESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQK--- 468
           ++++P L      D    + EL+  ++ V+ ME         +       LQ E +K   
Sbjct: 98  EEEEPGLVEGDPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMN 157

Query: 469 ---PPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDAT 528
              PP +A           EADAR+I+V NV + AT + L  HF+  G V +V I+ D  
Sbjct: 158 MSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKF 217

Query: 529 TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVI--WPRAVRG 588
           +G PKG AY+EF  KES   +L+LD + F  R +KV+ K  ++  G ST    +PRA   
Sbjct: 218 SGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRARYR 277

Query: 589 SPFPTSRFTRAPFMRGVPGGFRARPPMKL---RARSMQW 614
           +       +R+ F      GF +RP  ++   RAR+  W
Sbjct: 278 ARTTNYNSSRSRFY----SGFNSRPRGRVYRGRARATSW 302

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy Swiss-Prot
Match: Q8CCS6 (Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3)

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-14
Identity = 68/219 (31.05%), Postives = 105/219 (47.95%), Query Frame = 0


Query: 409 QKDQPSLAANSSRD---IESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQK--- 468
           ++++P L      D    + EL+  ++ V+ ME         +       LQ E +K   
Sbjct: 94  EEEEPGLVEADPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMN 153

Query: 469 ---PPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDAT 528
              PP +A           EADAR+I+V NV + AT + L  HF+  G V +V I+ D  
Sbjct: 154 MSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKF 213

Query: 529 TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVI--WPRAVRG 588
           +G PKG AY+EF  KES   +L+LD + F  R +KV+ K  ++  G ST    +PR+   
Sbjct: 214 SGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRSRYR 273

Query: 589 SPFPTSRFTRAPFMRGVPGGFRARPPMKL---RARSMQW 614
           +       +R+ F      GF +RP  ++   RAR+  W
Sbjct: 274 ARTTNYNSSRSRFY----SGFNSRPRGRIYRGRARATSW 298

[Close]

BLAST of Cucsat.G12138.T8 vs. NCBI nr
Match: XP_011651785.1 (nucleolin 1 isoform X3 [Cucumis sativus] >KGN58820.2 hypothetical protein Csa_001137 [Cucumis sativus])

HSP 1 Score: 1264 bits (3272), Expect = 0.0
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDIESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEA 480
           RDIESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEA
Sbjct: 421 RDIESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEA 480

Query: 481 DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA 540
           DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA
Sbjct: 481 DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA 540

Query: 541 LSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGGFRA 600
           LSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGGFRA
Sbjct: 541 LSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGGFRA 600

Query: 601 RPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 653
           RPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK
Sbjct: 601 RPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 653

[Close]

BLAST of Cucsat.G12138.T8 vs. NCBI nr
Match: XP_011651784.1 (nucleolin 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 1259 bits (3258), Expect = 0.0
Identity = 653/656 (99.54%), Postives = 653/656 (99.54%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDI---ESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPL 480
           RDI   ESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPL
Sbjct: 421 RDIFLQESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGG 600

Query: 601 FRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 653
           FRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK
Sbjct: 601 FRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 656

[Close]

BLAST of Cucsat.G12138.T8 vs. NCBI nr
Match: XP_011651783.1 (nucleolin 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1248 bits (3230), Expect = 0.0
Identity = 653/684 (95.47%), Postives = 653/684 (95.47%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDI-------------------------------ESELQGTRSAVQVMENGEPVTLVNQR 480
           RDI                               ESELQGTRSAVQVMENGEPVTLVNQR
Sbjct: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVMENGEPVTLVNQR 480

Query: 481 KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540
           KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV
Sbjct: 481 KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540

Query: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 600
           LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV
Sbjct: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 600

Query: 601 IWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLS 653
           IWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLS
Sbjct: 601 IWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLS 660

[Close]

BLAST of Cucsat.G12138.T8 vs. NCBI nr
Match: XP_008461792.1 (PREDICTED: uncharacterized protein LOC103500309 isoform X3 [Cucumis melo])

HSP 1 Score: 1207 bits (3122), Expect = 0.0
Identity = 625/653 (95.71%), Postives = 635/653 (97.24%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+SSEMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP  KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           R  EYG T VEND+YGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNI+GHRVFDDSWTAESGVRKGSNLRTVAFRAV+NSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDIESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEA 480
           RDIESELQGTRSAVQV ENGEPVTLVNQRKTPASNLQ+EFQKPPLSANGQFA TRPLEEA
Sbjct: 421 RDIESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPLEEA 480

Query: 481 DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA 540
           DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA
Sbjct: 481 DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA 540

Query: 541 LSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGGFRA 600
           LSLDGTSFMSRILKVVRKNASQLEGASTV WPRAVRGSPFPTSRFTR PFMRGVPGGFRA
Sbjct: 541 LSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGGFRA 600

Query: 601 RPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 653
           RPPMKL ARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKP DK
Sbjct: 601 RPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 652

[Close]

BLAST of Cucsat.G12138.T8 vs. NCBI nr
Match: XP_008461791.1 (PREDICTED: uncharacterized protein LOC103500309 isoform X2 [Cucumis melo] >TYK01130.1 nucleolin 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1201 bits (3108), Expect = 0.0
Identity = 625/656 (95.27%), Postives = 635/656 (96.80%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+SSEMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP  KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           R  EYG T VEND+YGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNI+GHRVFDDSWTAESGVRKGSNLRTVAFRAV+NSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDI---ESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPL 480
           RDI   ESELQGTRSAVQV ENGEPVTLVNQRKTPASNLQ+EFQKPPLSANGQFA TRPL
Sbjct: 421 RDIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKVVRKNASQLEGASTV WPRAVRGSPFPTSRFTR PFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGG 600

Query: 601 FRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 653
           FRARPPMKL ARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKP DK
Sbjct: 601 FRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 655

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy TrEMBL
Match: A0A0A0L9I7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV=1)

HSP 1 Score: 1248 bits (3230), Expect = 0.0
Identity = 653/684 (95.47%), Postives = 653/684 (95.47%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDI-------------------------------ESELQGTRSAVQVMENGEPVTLVNQR 480
           RDI                               ESELQGTRSAVQVMENGEPVTLVNQR
Sbjct: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVMENGEPVTLVNQR 480

Query: 481 KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540
           KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV
Sbjct: 481 KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540

Query: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 600
           LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV
Sbjct: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 600

Query: 601 IWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLS 653
           IWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLS
Sbjct: 601 IWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLS 660

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy TrEMBL
Match: A0A1S3CGU7 (uncharacterized protein LOC103500309 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1207 bits (3122), Expect = 0.0
Identity = 625/653 (95.71%), Postives = 635/653 (97.24%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+SSEMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP  KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           R  EYG T VEND+YGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNI+GHRVFDDSWTAESGVRKGSNLRTVAFRAV+NSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDIESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEA 480
           RDIESELQGTRSAVQV ENGEPVTLVNQRKTPASNLQ+EFQKPPLSANGQFA TRPLEEA
Sbjct: 421 RDIESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPLEEA 480

Query: 481 DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA 540
           DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA
Sbjct: 481 DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA 540

Query: 541 LSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGGFRA 600
           LSLDGTSFMSRILKVVRKNASQLEGASTV WPRAVRGSPFPTSRFTR PFMRGVPGGFRA
Sbjct: 541 LSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGGFRA 600

Query: 601 RPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 653
           RPPMKL ARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKP DK
Sbjct: 601 RPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 652

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy TrEMBL
Match: A0A5D3BPZ5 (Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00280 PE=4 SV=1)

HSP 1 Score: 1201 bits (3108), Expect = 0.0
Identity = 625/656 (95.27%), Postives = 635/656 (96.80%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+SSEMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP  KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           R  EYG T VEND+YGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNI+GHRVFDDSWTAESGVRKGSNLRTVAFRAV+NSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDI---ESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPL 480
           RDI   ESELQGTRSAVQV ENGEPVTLVNQRKTPASNLQ+EFQKPPLSANGQFA TRPL
Sbjct: 421 RDIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKVVRKNASQLEGASTV WPRAVRGSPFPTSRFTR PFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGG 600

Query: 601 FRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 653
           FRARPPMKL ARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKP DK
Sbjct: 601 FRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 655

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy TrEMBL
Match: A0A1S3CFZ8 (uncharacterized protein LOC103500309 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1201 bits (3108), Expect = 0.0
Identity = 625/656 (95.27%), Postives = 635/656 (96.80%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+SSEMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP  KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           R  EYG T VEND+YGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNI+GHRVFDDSWTAESGVRKGSNLRTVAFRAV+NSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDI---ESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPL 480
           RDI   ESELQGTRSAVQV ENGEPVTLVNQRKTPASNLQ+EFQKPPLSANGQFA TRPL
Sbjct: 421 RDIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKVVRKNASQLEGASTV WPRAVRGSPFPTSRFTR PFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGG 600

Query: 601 FRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 653
           FRARPPMKL ARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKP DK
Sbjct: 601 FRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 655

[Close]

BLAST of Cucsat.G12138.T8 vs. ExPASy TrEMBL
Match: A0A5A7U3W4 (Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00490 PE=4 SV=1)

HSP 1 Score: 1191 bits (3080), Expect = 0.0
Identity = 625/684 (91.37%), Postives = 635/684 (92.84%), Query Frame = 0


Query: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+SSEMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP  KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGKTEKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360
           R  EYG T VEND+YGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420
           NEDVNI+GHRVFDDSWTAESGVRKGSNLRTVAFRAV+NSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDI-------------------------------ESELQGTRSAVQVMENGEPVTLVNQR 480
           RDI                               ESELQGTRSAVQV ENGEPVTLVNQR
Sbjct: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQR 480

Query: 481 KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540
           KTPASNLQ+EFQKPPLSANGQFA TRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV
Sbjct: 481 KTPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540

Query: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 600
           LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV
Sbjct: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 600

Query: 601 IWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLS 653
            WPRAVRGSPFPTSRFTR PFMRGVPGGFRARPPMKL ARSMQWKRDNQT TADNGASLS
Sbjct: 601 TWPRAVRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLS 660

The following BLAST results are available for this feature:

BLAST of Cucsat.G12138.T8 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q28165	3.2e-15	32.84	Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3	[more]
Q9DDY9	4.1e-15	32.30	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]
Q7ZXB8	4.1e-15	32.30	Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=...	[more]
Q86U42	4.1e-15	31.51	Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3	[more]
Q8CCS6	1.2e-14	31.05	Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3	[more]

BLAST of Cucsat.G12138.T8 vs. NCBI nr


Match Name	Identity	Description
XP_011651785.1	100.00	nucleolin 1 isoform X3 [Cucumis sativus] >KGN58820.2 hypothetical protein Csa_00...	[more]
XP_011651784.1	99.54	nucleolin 1 isoform X2 [Cucumis sativus]	[more]
XP_011651783.1	95.47	nucleolin 1 isoform X1 [Cucumis sativus]	[more]
XP_008461792.1	95.71	PREDICTED: uncharacterized protein LOC103500309 isoform X3 [Cucumis melo]	[more]
XP_008461791.1	95.27	PREDICTED: uncharacterized protein LOC103500309 isoform X2 [Cucumis melo] >TYK01...	[more]

BLAST of Cucsat.G12138.T8 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0L9I7	95.47	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV...	[more]
A0A1S3CGU7	95.71	uncharacterized protein LOC103500309 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3BPZ5	95.27	Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]
A0A1S3CFZ8	95.27	uncharacterized protein LOC103500309 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7U3W4	91.37	Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 484..556 e-value: 3.2E-21 score: 86.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 485..553 e-value: 1.7E-17 score: 63.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 483..560 score: 17.233515
None	No IPR available	GENE3D	1.20.1390.10	PWI domain	coord: 15..96 e-value: 6.8E-10 score: 40.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..425
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..425
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 611..653
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 613..639
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..193
None	No IPR available	PANTHER	PTHR14738:SF32	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 6..649
IPR002483	PWI domain	PFAM	PF01480	PWI	coord: 29..92 e-value: 4.2E-7 score: 30.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 394..564 e-value: 1.7E-24 score: 88.5
IPR040366	Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14	PANTHER	PTHR14738	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 6..649
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 477..557

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12138	Cucsat.G12138	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12138.T8.E1	Cucsat.G12138.T8.E1	exon
Cucsat.G12138.T8.E2	Cucsat.G12138.T8.E2	exon
Cucsat.G12138.T8.E3	Cucsat.G12138.T8.E3	exon
Cucsat.G12138.T8.E4	Cucsat.G12138.T8.E4	exon
Cucsat.G12138.T8.E5	Cucsat.G12138.T8.E5	exon
Cucsat.G12138.T8.E6	Cucsat.G12138.T8.E6	exon
Cucsat.G12138.T8.E7	Cucsat.G12138.T8.E7	exon
Cucsat.G12138.T8.E8	Cucsat.G12138.T8.E8	exon
Cucsat.G12138.T8.E9	Cucsat.G12138.T8.E9	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12138.T8.C9	Cucsat.G12138.T8.C9	CDS
Cucsat.G12138.T8.C8	Cucsat.G12138.T8.C8	CDS
Cucsat.G12138.T8.C7	Cucsat.G12138.T8.C7	CDS
Cucsat.G12138.T8.C6	Cucsat.G12138.T8.C6	CDS
Cucsat.G12138.T8.C5	Cucsat.G12138.T8.C5	CDS
Cucsat.G12138.T8.C4	Cucsat.G12138.T8.C4	CDS
Cucsat.G12138.T8.C3	Cucsat.G12138.T8.C3	CDS
Cucsat.G12138.T8.C2	Cucsat.G12138.T8.C2	CDS
Cucsat.G12138.T8.C1	Cucsat.G12138.T8.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12138.T8	Cucsat.G12138.T8-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:1900364	negative regulation of mRNA polyadenylation
biological_process	GO:0043488	regulation of mRNA stability
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0046872	metal ion binding