Cucsat.G12130.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGCACAAAAAAAAAATAAAAACACGAACTTGTTCTTTAGAAAATCGAATTTGGAGACCCTCTTTCTCTAGAATCTTCTTCGACCTTTGAAAATACAAACTGAAATCCATCCACCCACTGACCAAAAAGGGCGATTTTGACTCGCAGTAAGCTCTCGGGTCCCTCTCTGCAACCTCAATTTCTCTTCTTTTTCATTTTTTCTTCTGTGTAATTTGTCTCTCTTTGTATCTGCATCTTGTAAGAAAATCTGATGGATACATTTTAATCAACTTATTTTGTTCTATTTGGTAGTTTTCTTATAAACTCAGCTCAGTGTGAAATTTTTGTTTCACTTGATCAGCTCAAGAAAAAAATTTAATTCTTTGAAGTGGACCGCATGAGCTATACTATGCAATTCACTTATGAGCTTCAATTTTTTTTTTTTTTGTGGGGGGGGGGCTTCATTTTCAATTAATTTGGATTTTAATCTTCTTTTCTCTGGTTAGTTGTAATTTTACTTGTCAACTGTCTTCAATGCAGACAATTTGGAGTGTCTTCTTGGTTATCAGGTGAAGAAATGGATGGAGAGCAGGAGCAACAGACCCATAATCCTGGTTATTTCTTGAACTTTATTTTTTCCTGTGTATGATTCAATGTTTTGTGTATTACTTTTAAACCTCTTAACTGAATGACTAATTAAGTTGGAATAAGAAAAGTTTGTCAAGTCGTTAGTTACAAGCTAAAGAAGCATGGATACGGATACGAGACATAGACATTACATAAGGCAGACATGATTACTCAGACACAACTAGGACATGTTCATTGAAACATACATTTTTTAGATATACATATATATATATATATATATATTTGAAAAGAAGGAAGTTCAAAATCAATGAGTTTATATATTTATCTGAAAAAATTAGTTTGATGTATTTTGCTCTCAGTTTTTATTATTTTTGCCATATATGTGTCTATTTTAGTATAGGAGTGATTAATGCATGTCGAACAAATGTTGGTCCATTTTTTACTATGTCAAGTAATGTATGATTGCTGTAAGGTTTCTTTCTCTGGTAAAGCAAACATGGCTGGTTTCCATAGATAAAATTCTAATGTGGTAAGCTGAGGATTAATGCCATGGTTATCGGGATAATTTATGACAAATTCATTTAATACTCTGTCCTTAAACATTCTTGATTCGACTTTCAATGCATTTCATTTTGATCATAGGATCCATCATTTTCCTCCCATTACATTTTGATTTCATTTTTTCTTATCAAAATTCGAAAGTTTGATGGACTTCTTTTTGTACCAATATATGTAATGCCAAAACATCATTACTATTTGTTTGACAATGCATGGAGTGTGAGACTCACTCAGTTTCATCACCTCCACCATCTCCTTCCAATACTGAATTTTTCACATTTCTCTCATCTCTTTCCACTCTTGCATTTTTCTATGAAGAGATAGATTAAGCTAATTTTGGTTTCTTAGAGTTAATGGGGAAAATTATGCCAGTTTGTTATTCTTGGTTTCAAATGGGTTGTTTCTTGGGAGCTGAGTGCTAAGTATCATTTTAAACATCCCTTCAGTGTATTTCTTCTTGATGAAAATTCTGATTTATAATCCATGGCATTTCTTTAAGTTGGTGCTTCGCATAATTCTAGACTTATACTACATGTACAAGCAATCAATGTCTCAATTTGAGAACATCTAATATGTCAATACGATGCAGAAGATCAAAAGTTTCTTCAATGTTTCTCAGTAGTATGATTGGTTCATGTCAAGGAAATGCAATTGACATAAATGAACCTACTAATCACATGTATGACATGTAGGTCAAGATGATGAAAATGAAATAGTAGCTGAAGGTGCTTCTGTTGTGCATGGGGAACCTCCAAGCGATGACAATGGCCCTCCCAAAGTTGATTCTGAAGTAGAAGTTCTTCAGGAGAAAGTCACAAAACAGATTATGAAGGAAGGTCATGGTCAAATACCGTCTAAATATTCAACGTGCTTTTGTAAGTACAATACACCCTTATGCCTAAATTTGACATCTTGCCAGTACCTTGATGTTGTTGTTCTACAGTTTTTCATGTGTGGGAGATGTAGATTCATGATATTTTCAAGTTGAAAACTATCAGTAGTCTCACTTATTGCAAAGTTGACTCTTGTCGCTTCTTTAATCAAAATTTATGATTATACGATATGGTTTCCTGATGGTGATTGATGGTTTAAAGATTTTCTTATGCATCTAATGAACTCCTTGTTCTAATGTAGGAATTCTAAATCTCAACTCAAGATTTTGATATAATGCATCTGACATCCTATTATTGGCTTGTTGAAACTCTTGGATTAATTAGGATGCTGTAGTATTTTTGCTCAAGCCATTATTTTATCGTATTAGAACTTTAGAAGTGTAAATCTTCAACATCCCTGGCCTTCTTAAAAGCTTTTATTATTTTTATCACATTCGTCAAATCTTTTAGCCATTGAAGCAATGGATATATGAGTGACTTGGCATATCTGTCAGTGCATTATCGGGCGTGGACTGAAAGCACTCGGCACAAATTTGAGGACACGTGGAATGAACTACGACCCCTTGAACTTGTATTAGGGAAAGGTATTTATGTACTTAGGCCTGTAATTATTGAAACACCAAACGTGTGTACGTTTATTCTGATATCCTCCTAATACTTACGTAACAGAAAAAAAAGAAATGACTGGCTTGAGTATTGGTGTTGCCAGTATGAAATCTGGTGAGCGTGCCCTGTTGCACGTGGGATGGGAATTAGCTTATGGAAAGGAAGGAAACTTTTCCTTCCCTAACGTTCCACCGATGTCAGATGTATTATATGAAGTCGAGCTCATTGGGTTTGACGAGACCAAAGAAGTAAGATTCTGTTGTAGTTTCCAGTTGTTGCTATCTTCAATCTCATTGGTACACTCCAACAGTAGCCAAATGTTCTGACTGTTACAATCTCCTATATGTTTTTCAGGGAAAAGCTCGAAGTGATATGACTGTTGAAGAAAGAATTGGTGCAGCAGATCGCAGAAAGATGGATGGCAATGTTTTATTCAAGGAGGAAAAACTGGAAGAGGCCATGCAACAGTATGAAATGGTTACATGCTTCTCTTATTCTACTTTTACCATTTAAATTTCAAGTTTCATACATTCCAGAAGATAATTTTCATCTTCTTGACAAGTTTTTCAATGGTTTCTTTATAGGCCATAGCATATATGGGTGACGATTTCATGTTCCAGTTGTTTGGGAAGTACCGTGACATGGCTTTGGCTGTTAAGAATCCATGCCATCTTAACATGTCGGCTTGTCTCATAAAGCTCAAGCGCTATGAGGAAGCCATCGCTCAGTGTAGCATGGTAAGATACAATTATTTATAGGCGAAGAGAAATTGTTTCTCATGTTCTATGGATATGGTTCAGTATATATACTTCAAAGATAGCTCAAGTAAGAGGTTATGATTCATAATGCCTTCGAGGAATTTAATATTATGAGCTTTTCATCCATCACATGTTATAAGATCAGAATATGGAGGACGGAGGTTAGAGGACTTCTTAGTAGTAGATCAGACACATCGAAAAGAGATCAAGGTGTTGTGCACATGTTATAAGATAGCTCAATCTATTTTGACAGATTTTTCTCTTTCTGTGTTGTGCAAATCACGTTTTCTTCTCCATCACTACAACTATGTCTGGATTCATAGCTCACCATTTGTATAAGCTGATTTGATGAAGCTTGGAATTTAGATATTTCGTGTTTGGATTATGCTAAGAAATAGGTTTATAAGGTGTATAGAGGCTTGAATTTGAGTAACATGTATGATTGGTAACAATTAATTTAGTTTGAGGTTTGTGGAATATGGAGGTTCTAAAAGTTCAAACCGGCTTTAATGTCTGACAGGTATTGGCAGAGGATGAAAGCAATGCCAAGGCCTTGTTCAGACGGGGAAAGGCTAGAGCAGAACTCGGGCAAACTGATGCAGCTCGGGAAGACTTGCTAAAAGCACGCAAATACGCACCTGAAGACAAGGCAATCGGAAGGGAGCTAAAATTGCTTGCTGAACATGACAAGGCTGTTTATCAGAAGCAAAAAGAGATCTACAAAGGAATTTTTGGTCCGAGACCTGAGCCAAAACCGAAGCATGGTGTAATCGTGACTCAGCTAATCCTTATTTGGCAATGGCTGATATCGTTTTTCTACCGTCTCTTCAAGCGCAAAGAAAAACACCATGGTGACTAGTTGCGCCTTTGAAGAACTGGGTTGAGAACTGCATATGATGTTAGATTAGAAAACTAAACTCTGAGCTAATTTTTTCTATTTATCTTCTGGTCTTGAATTTTCACACCAGTTGTCAACACAAAGGTTTTCAATGGCTGAGTTGAACATTTGTGACAATGCATTTCACTTCTTCCTTCTTAACCAATTTGTCTAAATGCATCTTGAAAATGAATCAATAGATGTTTAAATGTGGACCGTACCATCCTGAATTTGCCAGTGATAAATAAAAGACTGAATTGAATTTAGTAG ATGAGTGACTTGGCATATCTGTCAGTGCATTATCGGGCGTGGACTGAAAGCACTCGGCACAAATTTGAGGACACGTGGAATGAACTACGACCCCTTGAACTTGTATTAGGGAAAGAAAAAAAAGAAATGACTGGCTTGAGTATTGGTGTTGCCAGTATGAAATCTGGTGAGCGTGCCCTGTTGCACGTGGGATGGGAATTAGCTTATGGAAAGGAAGGAAACTTTTCCTTCCCTAACGTTCCACCGATGTCAGATGTATTATATGAAGTCGAGCTCATTGGGTTTGACGAGACCAAAGAAGGAAAAGCTCGAAGTGATATGACTGTTGAAGAAAGAATTGGTGCAGCAGATCGCAGAAAGATGGATGGCAATGTTTTATTCAAGGAGGAAAAACTGGAAGAGGCCATGCAACAGTATGAAATGGCCATAGCATATATGGGTGACGATTTCATGTTCCAGTTGTTTGGGAAGTACCGTGACATGGCTTTGGCTGTTAAGAATCCATGCCATCTTAACATGTCGGCTTGTCTCATAAAGCTCAAGCGCTATGAGGAAGCCATCGCTCAGTGTAGCATGGTATTGGCAGAGGATGAAAGCAATGCCAAGGCCTTGTTCAGACGGGGAAAGGCTAGAGCAGAACTCGGGCAAACTGATGCAGCTCGGGAAGACTTGCTAAAAGCACGCAAATACGCACCTGAAGACAAGGCAATCGGAAGGGAGCTAAAATTGCTTGCTGAACATGACAAGGCTGTTTATCAGAAGCAAAAAGAGATCTACAAAGGAATTTTTGGTCCGAGACCTGAGCCAAAACCGAAGCATGGTGTAATCGTGACTCAGCTAATCCTTATTTGGCAATGGCTGATATCGTTTTTCTACCGTCTCTTCAAGCGCAAAGAAAAACACCATGGTGACTAG MSDLAYLSVHYRAWTESTRHKFEDTWNELRPLELVLGKEKKEMTGLSIGVASMKSGERALLHVGWELAYGKEGNFSFPNVPPMSDVLYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNVLFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMSACLIKLKRYEEAIAQCSMVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKYAPEDKAIGRELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTQLILIWQWLISFFYRLFKRKEKHHGD Homology
BLAST of Cucsat.G12130.T2 vs. ExPASy Swiss-Prot
Match: Q9LDC0 (Peptidyl-prolyl cis-trans isomerase FKBP42 OS=Arabidopsis thaliana OX=3702 GN=FKBP42 PE=1 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 1.9e-127 Identity = 222/289 (76.82%), Postives = 260/289 (89.97%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. ExPASy Swiss-Prot
Match: Q9FJL3 (Peptidyl-prolyl cis-trans isomerase FKBP65 OS=Arabidopsis thaliana OX=3702 GN=FKBP65 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28 Identity = 87/232 (37.50%), Postives = 120/232 (51.72%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. ExPASy Swiss-Prot
Match: Q38931 (Peptidyl-prolyl cis-trans isomerase FKBP62 OS=Arabidopsis thaliana OX=3702 GN=FKBP62 PE=1 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 4.4e-28 Identity = 84/226 (37.17%), Postives = 125/226 (55.31%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. ExPASy Swiss-Prot
Match: Q9TRY0 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Bos taurus OX=9913 GN=FKBP4 PE=1 SV=4) HSP 1 Score: 109.8 bits (273), Expect = 5.6e-23 Identity = 73/253 (28.85%), Postives = 133/253 (52.57%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. ExPASy Swiss-Prot
Match: Q02790 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens OX=9606 GN=FKBP4 PE=1 SV=3) HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21 Identity = 70/253 (27.67%), Postives = 130/253 (51.38%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. NCBI nr
Match: XP_004149717.1 (peptidyl-prolyl cis-trans isomerase FKBP42 [Cucumis sativus] >KGN58583.1 hypothetical protein Csa_001553 [Cucumis sativus]) HSP 1 Score: 591 bits (1524), Expect = 1.05e-211 Identity = 294/296 (99.32%), Postives = 296/296 (100.00%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. NCBI nr
Match: KAA0048366.1 (peptidyl-prolyl cis-trans isomerase FKBP42 [Cucumis melo var. makuwa]) HSP 1 Score: 578 bits (1489), Expect = 1.62e-206 Identity = 291/296 (98.31%), Postives = 293/296 (98.99%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. NCBI nr
Match: XP_008461808.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42 [Cucumis melo]) HSP 1 Score: 578 bits (1489), Expect = 2.17e-206 Identity = 291/296 (98.31%), Postives = 293/296 (98.99%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. NCBI nr
Match: XP_038905372.1 (peptidyl-prolyl cis-trans isomerase FKBP42 [Benincasa hispida]) HSP 1 Score: 570 bits (1468), Expect = 3.43e-203 Identity = 285/296 (96.28%), Postives = 289/296 (97.64%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. NCBI nr
Match: XP_022949014.1 (peptidyl-prolyl cis-trans isomerase FKBP42 [Cucurbita moschata] >XP_022949015.1 peptidyl-prolyl cis-trans isomerase FKBP42 [Cucurbita moschata]) HSP 1 Score: 555 bits (1431), Expect = 1.48e-197 Identity = 277/296 (93.58%), Postives = 285/296 (96.28%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. ExPASy TrEMBL
Match: A0A0A0L9T6 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_3G690310 PE=4 SV=1) HSP 1 Score: 591 bits (1524), Expect = 5.07e-212 Identity = 294/296 (99.32%), Postives = 296/296 (100.00%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. ExPASy TrEMBL
Match: A0A5A7U2B0 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00850 PE=4 SV=1) HSP 1 Score: 578 bits (1489), Expect = 7.83e-207 Identity = 291/296 (98.31%), Postives = 293/296 (98.99%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. ExPASy TrEMBL
Match: A0A1S3CGW2 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103500320 PE=4 SV=1) HSP 1 Score: 578 bits (1489), Expect = 1.05e-206 Identity = 291/296 (98.31%), Postives = 293/296 (98.99%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. ExPASy TrEMBL
Match: A0A6J1GBK8 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111452484 PE=4 SV=1) HSP 1 Score: 555 bits (1431), Expect = 7.17e-198 Identity = 277/296 (93.58%), Postives = 285/296 (96.28%), Query Frame = 0
BLAST of Cucsat.G12130.T2 vs. ExPASy TrEMBL
Match: A0A6J1DGV1 (Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111020314 PE=4 SV=1) HSP 1 Score: 551 bits (1421), Expect = 2.39e-196 Identity = 273/296 (92.23%), Postives = 287/296 (96.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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