Cucsat.G11973.T9 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCTCCAAGCTTATATAGTGCTCCCATCCTCACTTCCACTCCCCACCCCACACTCTCCTTCTTGTTCATTCTTCATTTCTCTCTTCCCCTCTTTAGGGGTTCTTCTCCTCTGTTTCATAATCGATTTATCACAACTTTTATCTTGATAAATCCCACCGGCATTGCCATTTCCTTCTCCCATTCCTTCAAAATGGCAAATCCCATTTCCCCCATTGCTCTCTTTATCCTACTTCTAGCCCCCTCTGCCCTAGCCGGCCATGATTACGGCCAAGCTCTCACCAAGAGCCTTCTCTTCTTCGAAGCTCAGAGATCCGGCTACCTCCCCCACAACCAGCGCGTCAATTGGCGAGCCAATTCCGGCCTCCAAGACGGCAAGGCTAGCGGGGTAAACCCTTTAAAACCCTGTTTGGTTACTCAGAAAATCGATCGGGAAACTTAATTTGGGGATTTTGTATGTTTGTTGTAGGTGGATCTGGTCGGAGGATACTACGACGCCGGTGACAATGTGAAGTTCGGACTTCCGATGGCGTTCACGGTGACGATGATGAGTTGGAGTATTATTGAATATGGAAAACAAATGGCCACTAATGGCGAACTTAGCCATGCCCTAGACGCCGTCAAATGGGGCACCGATTACTTCATCAAAGCCCACCCTGAACCCTATGTTCTCTATGGAGAGGTAACCTTAATCTTTTTCGTTCTTTTTAATTCAACGATTTCAAATTAATCCAACCATCAAACTTTGATATGATAAGTGGGTCAATTCAACGCAATTTTCTTTCATAACGTTAGATTTTATTAGGTAGAGATGTTTTAATTTGTACGTTGATTTGTTATGAAATGATAGTTCTATTAATGTTTTACTGACCATTATGCTTAACTAGTTAGAATAAAATTGGTAATTATACTTAAGGGAAGGACTCTAATATCTAATTTTTTTACTGATATTTGACTATTTTAGTAAATTAAACACCAATTTGTCGCCTTGTTCAAATGTCTTATGTTAGTTGTTAAATTTATTATTAAAATATAAGTGTGTGTATTTTAGGGGTGATTTGTCAATTGCATAAATGAGAGGGACTTAATTTGTAATTAGGCTTGATTTGTGTGTGTGTGTTTTTTTAGTTAAAATTATGAAAAAGGGATTAACAACATGGTTAATGAAATGGGATTTTAGGAAATTTCTGTTATTAAAATGAATAAATATTTGAAATTAACAAGTATTATCTTTTGAAATAAAAATCTGAGAATGCCAAAAAGTACGTTAGATTCCAAAAAAATGTGATTGGTTTAATTTGTTTTTGTAAAATCATCTTTGAGTGGAAAAATTAAAAGCAAATTGATGTACGGAATCATTAGGTGGGAGATGGGAACACGGACCATTACTGCTGGCAGCGGCCGGAGGACATGACGACGGACCGCCACGCTTACAAGATCGACCCAAGCAATCCCGGGTCGGATCTCGCCGGAGAAACCGCCGCCGCTATGGCCGCCGCCTCCATCGTCTTCCGCCACTACAACCCTTCCTATGCCAATGAGCTCCTTTCCCATGCTCGCCAGGTTAGCCATTTTTATCATCTTTTTTATTTTTATTTCCACCAATTATGTATTCTTTTTTATTTTTCTGAAATGTATAAAATCATCCACAATAAAAGAAAATGAAAATAATTTTACAATTTAAAGCGTAGGCTAGCGGTACCCCACAGCACATGATACTATTAACTACCGCAGTTAATAGGTTTATTTATTGTGATATTGAAAGCTGTTGTTTTTTTAATAAGAAACATTTATTGTGTAATAAAAAAATATATTTTTTTTCTCAATTGAAAAAAATATTTTAAAGAGAATGTTTAAGAAATGTTTGGGTAAATTATAAACTTAGTTTTAGTTGGAGATGAGTTATAATTATAGTTTAGTCTGTAGAGTTAATTTAACAAAAATATTTATAGTGAATAAAAATAGGATTTTTAATATTTTGTTGGAAAAAAATAGCATAAAAATAGGCATGTGATAAAACTGTCGGTGGGAACTGTTTGGGGATGTGCATGTAGATGTGAAGTTACGGGAATGCCATTGGAGAGATTTAATAAATTTGTTTATTAAAAATGTATTTTGTTTGTCAGCTGTTTGAATTTGCGGATAAATACAGAGGAAAGTACGACAGCAGCATCACTGTGGCTCAGAAGTATTATCGATCCGTTAGTGGATACAATGTGCGTAAGCGTATCATCCTTCCCCTTTTCTTGGGCCCTTCTTCTATGGAAGCCCGTTGCTTACTGATTATTACTCACCTATCCCTTTGTTATGGGTTATTTGCAACGTTACTCCTGGAAATGATGACAATAATTCTGTAATTATAATTTGCAGGATGAGTTATTGTGGGCAGCAGCGTGGCTGTATGAGGCAACAAACAACCAATATTACTTGAATTACTTGGGAGAAAATGGTGACTCCATGGGAGGAACTGGTTGGAGTATGACTGAATTTGGTTGGGATGTCAAATATGCTGGTGTCCAAACCCTTGTTGCCAAGGTTGGTTTCCATTTTATTTTTTACATTTCTTTTTATCAAAAAAAAAAAATTATATACATTTAGAACTTTATGGGTGATTTAGACCCGACTATAACTGGGTGGAGTGACCACTACTTATTTGGAGTTTAAACAATAATAGTTGGTGTGACCACTGCAATTTTCTATTTCAAACTCTCTTTATTACAATATTTATCGTTTCTTGTTTGTTACATTGTAAAGTCATTTAAGTACAAATTATTATAATTTATATACTATAATAACTGATTTAATTCTCTTAAACCCTTGTTATAGTTCAAAAGTTGGTAAGGAAGTGTTATATACTATAATAACTGATTTAATGCTCTTAAACCCTTGTTATAGTTCAAAAGTTGGTAAGGAAGTGCTCTGAAAAAGACACCTAATAAGTTCATAACTTTTCAATTCAACTTTGTGTTAAAAGAATCAAAAGTTTAATGAGCTATTGGCACACAAATTTAATTTATAGTAAATAAGTAAGTTTTGTTTGAGAGGGTTTGGTTCTTGCAATTTGTGGATTGTAGATTTATTAATTCTTAAAAAGTTGAATGTTGAGTTTGAAGTAATTTTGATGTTTGTGATCGCAGTTTTTATTGCAAGGAAGAGCGGCTCACCATGCGCCGGTGTTCGAGAGGTACAAGGAGAAGGCTGAAAATTTCTTATGTTCTTGCATGAAGAAAGGCACTCGCAATGTTCAGACCACACCGGCCGGTCTCATCTTCCGTCAGAGATGGAACAATATGCAGTTTGTTACCAGCGCTTCTTTCCTCGCCACCGTCTACTCAGACTACCTTTCTTCCTCTGGTGGAAACTTGAAGTGCGCCGCCGGTTATGTCCAGCCTTCCGAGCTTCTTCGCTTTGCACAATCCCAGGTCCCTACATTTTCTCTTCAAATGGGAACAACTAGTTTTTGATCTTCAAGGTCAATGTTTGTTAACTGTTCGACGAATTGCCTAAATGGGGTTTTGATTTTGAACCAGGTGGATTACATTCTTGGGGACAATCCAAGAGCTACTAGTTACATGGTGGGATATGGAAACAATTACCCACGACAAGTCCATCACAGGGGATCTTCCATTGTTTCAATCAAGGTCAATTCCGCCTTTGTGAGCTGCAGGGGTGGCTATGCAACATGGTACACTAGAAAGGCAAGTGACCCAAACCTACTCACTGGTGCTCTTGTGGGTGGACCTGATGCCTATGACAACTTTGCTGATCAAAGGGACAATTATGAGCAGACTGAGCCTGCTACTTATAACAATGCCCCAATTCTTGGCATTTTAGCCAGGCTCAGTGGTGGACATAGTGGCTACAATCAGCTCCTTCCAGGTACTTACCTCATTTTGATCATCAGATTTCTCTTAAAGCATTTTCAAGTGCAATCATGGCATTGAGCATCCTTTTGTTTTCTCTCCAGTGCTTCTTCCTCCAGTTAATCATCCAGACCCATCTGCACAATCCAAGACACTTCCATCTCCAGGTATGATGCCTTTGCAATTATTTGGTTGGCTTAGAATACTTTGAACAGATCATTTTCTATATCACATGAACTGTTTGGTACTTAAGATGTCCATCACAAAAGGTTCTTCATGCCAACCAATCCAATTGGATTTTTAAGAAATAGTTGATGAATGACTAAATTGTGGCATAAAGCTGGTTTAATTCAAGAAATAGAAACTATTAGGATGAATGACTAAATTGGTCATGGAAGGCGAAAATTTGACAGAAAAGCTTGTTTTTGCAGCATCGTCTTCTACCCCAATTACCGTAGAGCAAAAGATGACGACTTCCTGGACTGCTAAAGGAAATACCTACTATAGATACTCTACAAAAGTGACCAACAAGTCACCAAAAACTCTCAAAAACCTGAAACTTTCGATATCTCAACTTTATGGGCCTCTCTGGGGGCTGGAGAAATCTGGTGAATCATATGTCTTCCCATCTTGGCTTAACTCATTAGCTGCAGGAGAAAGCCTTGAATTTGTTTACATTCACACTGCTTCTCAAGCCAAAATCTCGGTTTCCAGCTACACTCTCTCCTAAATATGAGGGAAGAATCTTGGAAACCAAATCAAGGCAATACAGCATACAAGCTTATGCGGTTCATGGAGTGGTGTAAGAATTGTGCAGTTATAGATAGCGAGAAAGTCCATATTTACGCGTGATATGTATTTGCTTAGGTTTTTTTTAGATGCAATTAGGCCAAATAATGGTGCTGAAGTTTGGGGGAAGAAAGGAGAGAAGAGAGTTTGAAACGGTGCTCATCCTCTTTCTCCACCCTCTTCAATGCTTTATAGACAGAATGAACAGCTGAGAGTGTCAGAGAAGGCAAACAAAGATGGCTTCTCAAAGGATTTGCAAGAGAGTTCTCATTTCTTTCCTTGTATTTTGAATTAGCTTTATGTATCCTTTTAGATGTGTGATTTGCAACATTTTCTTGATTCACACTCGAATGTAGTTTGTGAAACATGGTGTGCTTTTGCTTATCTTGTTTTTAAGATATTGTAAATTCATCACTATACTCAAAACCTTTTGTGTTACTTTTATGGTAAAGTGATTTTAATGGTTTGAAATGTTCTTAAACCATTGGGACATGGCATTTGTACCTTGAAAACAATGAATGTCAATCAATACAACTACTTTTGAAGTTTTTTCATTC ATGTATTTTGTTTGTCAGCTGTTTGAATTTGCGGATAAATACAGAGGAAAGTACGACAGCAGCATCACTGTGGCTCAGAAGTATTATCGATCCGTTAGTGGATACAATGATGAGTTATTGTGGGCAGCAGCGTGGCTGTATGAGGCAACAAACAACCAATATTACTTGAATTACTTGGGAGAAAATGGTGACTCCATGGGAGGAACTGGTTGGAGTATGACTGAATTTGGTTGGGATGTCAAATATGCTGGTGTCCAAACCCTTGTTGCCAAGTTTTTATTGCAAGGAAGAGCGGCTCACCATGCGCCGGTGTTCGAGAGGTACAAGGAGAAGGCTGAAAATTTCTTATGTTCTTGCATGAAGAAAGGCACTCGCAATGTTCAGACCACACCGGCCGGTCTCATCTTCCGTCAGAGATGGAACAATATGCAGTTTGTTACCAGCGCTTCTTTCCTCGCCACCGTCTACTCAGACTACCTTTCTTCCTCTGGTGGAAACTTGAAGTGCGCCGCCGGTTATGTCCAGCCTTCCGAGCTTCTTCGCTTTGCACAATCCCAGGTGGATTACATTCTTGGGGACAATCCAAGAGCTACTAGTTACATGGTGGGATATGGAAACAATTACCCACGACAAGTCCATCACAGGGGATCTTCCATTGTTTCAATCAAGGTCAATTCCGCCTTTGTGAGCTGCAGGGGTGGCTATGCAACATGGTACACTAGAAAGGCAAGTGACCCAAACCTACTCACTGGTGCTCTTGTGGGTGGACCTGATGCCTATGACAACTTTGCTGATCAAAGGGACAATTATGAGCAGACTGAGCCTGCTACTTATAACAATGCCCCAATTCTTGGCATTTTAGCCAGGCTCAGTGGTGGACATAGTGGCTACAATCAGCTCCTTCCAGTGCTTCTTCCTCCAGTTAATCATCCAGACCCATCTGCACAATCCAAGACACTTCCATCTCCAGGTATGATGCCTTTGCAATTATTTGGTTGGCTTAGAATACTTTGA MYFVCQLFEFADKYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWLYEATNNQYYLNYLGENGDSMGGTGWSMTEFGWDVKYAGVQTLVAKFLLQGRAAHHAPVFERYKEKAENFLCSCMKKGTRNVQTTPAGLIFRQRWNNMQFVTSASFLATVYSDYLSSSGGNLKCAAGYVQPSELLRFAQSQVDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSIKVNSAFVSCRGGYATWYTRKASDPNLLTGALVGGPDAYDNFADQRDNYEQTEPATYNNAPILGILARLSGGHSGYNQLLPVLLPPVNHPDPSAQSKTLPSPGMMPLQLFGWLRIL Homology
BLAST of Cucsat.G11973.T9 vs. ExPASy Swiss-Prot
Match: Q42059 (Endoglucanase 6 OS=Arabidopsis thaliana OX=3702 GN=At1g64390 PE=2 SV=2) HSP 1 Score: 537.0 bits (1382), Expect = 1.6e-151 Identity = 250/314 (79.62%), Postives = 285/314 (90.76%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. ExPASy Swiss-Prot
Match: Q8L7I0 (Endoglucanase 19 OS=Arabidopsis thaliana OX=3702 GN=At4g11050 PE=2 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 4.2e-144 Identity = 243/322 (75.47%), Postives = 275/322 (85.40%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. ExPASy Swiss-Prot
Match: Q6L4I2 (Endoglucanase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0212300 PE=2 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 3.9e-118 Identity = 197/295 (66.78%), Postives = 241/295 (81.69%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. ExPASy Swiss-Prot
Match: Q5NAT0 (Endoglucanase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GLU5 PE=1 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 4.6e-111 Identity = 189/293 (64.51%), Postives = 234/293 (79.86%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. ExPASy Swiss-Prot
Match: Q5NAT8 (Endoglucanase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLU7 PE=2 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 6.3e-108 Identity = 185/297 (62.29%), Postives = 230/297 (77.44%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. NCBI nr
Match: XP_004149748.1 (endoglucanase 6 [Cucumis sativus] >KGN53401.1 hypothetical protein Csa_014642 [Cucumis sativus]) HSP 1 Score: 651 bits (1679), Expect = 7.96e-231 Identity = 318/319 (99.69%), Postives = 318/319 (99.69%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. NCBI nr
Match: KAA0044906.1 (endoglucanase 6-like [Cucumis melo var. makuwa]) HSP 1 Score: 643 bits (1658), Expect = 1.24e-227 Identity = 313/318 (98.43%), Postives = 317/318 (99.69%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. NCBI nr
Match: XP_008451938.1 (PREDICTED: endoglucanase 6-like [Cucumis melo] >TYK16564.1 endoglucanase 6-like [Cucumis melo var. makuwa]) HSP 1 Score: 641 bits (1654), Expect = 5.01e-227 Identity = 312/318 (98.11%), Postives = 317/318 (99.69%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. NCBI nr
Match: XP_038893552.1 (endoglucanase 6 [Benincasa hispida]) HSP 1 Score: 639 bits (1649), Expect = 2.88e-226 Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. NCBI nr
Match: XP_023548395.1 (endoglucanase 6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 632 bits (1629), Expect = 3.15e-223 Identity = 308/318 (96.86%), Postives = 314/318 (98.74%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. ExPASy TrEMBL
Match: A0A0A0KZU5 (Endoglucanase OS=Cucumis sativus OX=3659 GN=Csa_4G051530 PE=3 SV=1) HSP 1 Score: 651 bits (1679), Expect = 3.86e-231 Identity = 318/319 (99.69%), Postives = 318/319 (99.69%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. ExPASy TrEMBL
Match: A0A5A7TRY4 (Endoglucanase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002000 PE=3 SV=1) HSP 1 Score: 643 bits (1658), Expect = 5.99e-228 Identity = 313/318 (98.43%), Postives = 317/318 (99.69%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. ExPASy TrEMBL
Match: A0A5D3D018 (Endoglucanase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003840 PE=3 SV=1) HSP 1 Score: 641 bits (1654), Expect = 2.43e-227 Identity = 312/318 (98.11%), Postives = 317/318 (99.69%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. ExPASy TrEMBL
Match: A0A1S3BS30 (Endoglucanase OS=Cucumis melo OX=3656 GN=LOC103493091 PE=3 SV=1) HSP 1 Score: 641 bits (1654), Expect = 2.43e-227 Identity = 312/318 (98.11%), Postives = 317/318 (99.69%), Query Frame = 0
BLAST of Cucsat.G11973.T9 vs. ExPASy TrEMBL
Match: A0A6J1IX13 (Endoglucanase OS=Cucurbita maxima OX=3661 GN=LOC111479337 PE=3 SV=1) HSP 1 Score: 630 bits (1624), Expect = 8.77e-223 Identity = 307/318 (96.54%), Postives = 314/318 (98.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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