Cucsat.G11136.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G11136.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Floricaula/leafy-like transcription factor
Location	ctg1740: 788025 .. 790615 (-)
RNA-Seq Expression	Cucsat.G11136.T2
Synteny	Cucsat.G11136.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGATTAAACAAGTACTGGTAGTCTCTCAATTGGATTCAAACACATGCATTAACAAAGCAAGCTCGTGATAGGAATAGGGTTAAGTTGGTACTTGAAGAGAGTCACCACCTTGCAGGCTTTACTGCCCATATTTTTGTATTGACATACGCTGAGCCAGCGCCACCTAGTTAGTTACGCAAACGCTGTGGAAGAAAGTTGGCAAGTTTCTGTGGACAAGACTATGAGGTTGAGGTGAGGGCATTTCCCGTAATTTGGTGAAGGGTTGCCTTTATAGGGTGCAACAGATCTCTTCCCAACCACCCCTTGCTCTTGTTTTCTTTCTCTCTGTGGCCTCTTGTCTCCTGAGATTTGCGACCCCAGACCGAAGCAAAGGAAGGTCGGAAAAAGAGCGACAGGTTGCGTTGTTTCTAGTTGCGTACCCTACGCACACACAAACACATAGCACCGCACCAACACCAGCACCAGCACCAGCACTACATATCCAATTCCTCAAATGGATCCAGAAACCCTCTCCGCCACTTTGTTCAAATGGGAGCCTCGAGAAATGGTGGGAGGCGGCAGCGGCGCACCCCTCCCAGCACCACTGCCCCCCTACTCGCTGCGGCCGAGGGAGTTGGGATTGGGAGGCCTGGAGGATTTGTTTCAGGCTTACGGAATCAGGTACTACACTGCCGCTAAAATTGCAGAACTCGGATTCACCGTCAGCACCCTCGTGGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTCCGCTGGGACCTTCTAGTGGGTGAAAGGTACGGAATTAAGGCTGCTGTACGAGCCGAACGCAGACGTCTAGATGACGAGATTGAATCCTCCAGACGCCGTCACCTCTTGTCCAACGACACCACTACTAACGTCGTTCTCGATGCCCTCTCTCAGGAAGGTCAGATACGTCTAATTTTCCCTTCCTTTTCTATATCCGGATTGTTTGGCTCTCCTCTTCTTTTTCGCGTCGAACATTTTAATACATGGAAGCATTTAGGTGATAAAGCATGACTAGACGTGTAATAACAATAACAGGGCTATCGGAAGAGCCGGTGCAGCAGGAGAAAGAGGCGGTGGGGAGCGGGGGAGGAGGAGGAGCGTGGGAGGCAGTTGTAGCCGCTGAGATGAGGAAGAAGCAGCGTAGGAGAAATGGATCAAAAAAGAAGCAGGTGATAGCGATGGAGGAGGATAACGATGAAAACGAGGGAGCTGGGGACGAGGAGGAGAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGAGGAAAGAAAAACGGCCTCGACTATCTTTTTCACCTCTATGAACAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCCAAGGAAAGAGGAGAAAAATGCCCCACTAAGGTATTCTTTTTTTTTTTTTTTCTTTCCTCTATTGGGGGGACTGCCTTTCCTTTCCTTGCCATAATCAACTTGAGCACCTCACCCAATCTGCGGTTCAAAACATGATCTTGGTCGTTACTCTAATTCTAAATAGTCTATTCTTAAATAGATATCATTTTGAGCTTATGGGATTTTAATGAGCTATAATGTAAATGGGCAATACAATGGAGGAATGAAGGGAAGTGAAGGAGGGGGCCCGTATGGTCTAAACAAAAAGTAGAAAGCGTGACAAGTGATGTGCAGTGAAGGGGAGAGATGAGTGTGTCAAAACGTGGACTGTGCAGTTATCTTTTGTGATGATTTCGTACTGTATGATACGCTGAGGGGGCAGTCAAAGATGGCGATTGGATAGTGGTTAATTAACTGACAAGGAGAGTGATGACGAGGATGATGATAATAATAATCTGCGTTGGTATTTCGTTTTGAAGCTTTGAATTGTTTGTTAAATTGTAAATCTTGGGTTGTGTGTATACAATCGGGCAGGTGACGAACCAGGTGTTTAGATATGCAAAGAAGGCGGGTGCAAGTTACATAAATAAGCCGAAAATGAGACACTACGTGCATTGCTATGCACTGCATTGTCTGGACGAGGAGGCGTCGAACGCATTGAGGAGCGTTTTCAAAGAGAGAGGCGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTCTGGTGACCATAGCAGGTACCCAAGGTTGGGACATCGATGCCATTTTCAATGCACATCCACGCCTTGCCATCTGGTATGTGCCTACCAAACTCCGCCAACTCTGCCACGCAGAGCGCAATGGTTCGACGGCCTCCACCTCCACTGCCTCCGCTCACTTGCCTTTTTAATTTCAGTCTCTCTTGTCAAGAATCGAGAGATGATAGCTTGCGCACTGTGAGGAAACTAGGTCCTTATTCGAATATGGAATGCAATGCCACCTTCTCTTTTGAGATCATATATTCATATATAATTTAATAATGTGTAGATCCCATGCTGCCTCTCCATAAAATTTAACTTCAATTTCGGCTTAGAAATAATACCTAGAAGTCTGTCGTCATTTTTTCAAAAAGAAGAAAAAAAGACAATTGTCCCGTTGAACTTAGTCCACACCTACCAATATCCTA

Coding sequence (CDS)

ATGGATCCAGAAACCCTCTCCGCCACTTTGTTCAAATGGGAGCCTCGAGAAATGGTGGGAGGCGGCAGCGGCGCACCCCTCCCAGCACCACTGCCCCCCTACTCGCTGCGGCCGAGGGAGTTGGGATTGGGAGGCCTGGAGGATTTGTTTCAGGCTTACGGAATCAGGTACTACACTGCCGCTAAAATTGCAGAACTCGGATTCACCGTCAGCACCCTCGTGGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTCCGCTGGGACCTTCTAGTGGGTGAAAGGTACGGAATTAAGGCTGCTGTACGAGCCGAACGCAGACGTCTAGATGACGAGATTGAATCCTCCAGACGCCGTCACCTCTTGTCCAACGACACCACTACTAACGTCGTTCTCGATGCCCTCTCTCAGGAAGGGCTATCGGAAGAGCCGGTGCAGCAGGAGAAAGAGGCGGTGGGGAGCGGGGGAGGAGGAGGAGCGTGGGAGGCAGTTGTAGCCGCTGAGATGAGGAAGAAGCAGCGTAGGAGAAATGGATCAAAAAAGAAGCAGGTGATAGCGATGGAGGAGGATAACGATGAAAACGAGGGAGCTGGGGACGAGGAGGAGAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGAGGAAAGAAAAACGGCCTCGACTATCTTTTTCACCTCTATGAACAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCCAAGGAAAGAGGAGAAAAATGCCCCACTAAGGTATTCTTTTTTTTTTTTTTTCTTTCCTCTATTGGGGGGACTGCCTTTCCTTTCCTTGCCATAATCAACTTGAGCACCTCACCCAATCTGCGGTTCAAAACATGA

Protein sequence

MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIESSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQRRRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVFFFFFFLSSIGGTAFPFLAIINLSTSPNLRFKT

Homology

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BLAST of Cucsat.G11136.T2 vs. ExPASy Swiss-Prot
Match: O22621 (Protein ALF OS=Petunia hybrida OX=4102 GN=ALF PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 5.1e-93
Identity = 198/310 (63.87%), Postives = 227/310 (73.23%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPRE--------MVGGGSGAPLPAPLPP-------YSLRPRELGLGG 60
           MDPE  SA+LFKW+PR         +       P P PLPP       YS+R RE  LGG
Sbjct: 1   MDPEAFSASLFKWDPRGAMPPPNRLLEAVAPPQPPPPPLPPPQPLPPAYSIRTRE--LGG 60

Query: 61  LEDLFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIK 120
           LE++FQAYGIRYYTAAKI ELGFTV+TL+DMKD+EL+DMMNSLS IFRW+LLVGERYGIK
Sbjct: 61  LEEMFQAYGIRYYTAAKITELGFTVNTLLDMKDDELDDMMNSLSQIFRWELLVGERYGIK 120

Query: 121 AAVRAERRRLDDEIESSRRRHLLSNDTTTNVVLDALSQEGLSEEPV-QQEKEAVGSGGGG 180
           AA+RAERRRL++  E  RRRH+LS+  T   VLDALSQEGLSEEPV QQE+EA GSGGGG
Sbjct: 121 AAIRAERRRLEE--EEGRRRHILSDGGTN--VLDALSQEGLSEEPVQQQEREAAGSGGGG 180

Query: 181 GAWEAVVAAEMRKKQRRRNG---SKKKQVIAMEEDNDENEGAGDEEE---NME----VSE 240
            AWE V     R +QRRR      ++++  +MEED D  EG  D E+   N E    +SE
Sbjct: 181 TAWEVVAPGGGRMRQRRRKKVVVGRERRGSSMEEDEDTEEGQEDNEDYNINNEGGGGISE 240

Query: 241 RQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVFFFFF 285
           RQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCR+FLIQVQNIAKERGEKCPTKV    F
Sbjct: 241 RQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVF 300

[Close]

BLAST of Cucsat.G11136.T2 vs. ExPASy Swiss-Prot
Match: P23915 (Floricaula protein OS=Antirrhinum majus OX=4151 GN=FLO PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 3.3e-92
Identity = 193/282 (68.44%), Postives = 220/282 (78.01%), Query Frame = 0


Query: 1   MDPETLSATLFKW-------EPREMVGGGSGAPLPAP-LPPYSLRPRELGLGGLEDLFQA 60
           MDP+   A LFKW       +P  ++   +  P P P  P YS+RPRE  LGGLE+LFQA
Sbjct: 1   MDPD---AFLFKWDHRTALPQPNRLLDAVAPPPPPPPQAPSYSMRPRE--LGGLEELFQA 60

Query: 61  YGIRYYTAAKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAER 120
           YGIRYYTAAKIAELGFTV+TL+DM+DEEL++MMNSL  IFRWDLLVGERYGIKAAVRAER
Sbjct: 61  YGIRYYTAAKIAELGFTVNTLLDMRDEELDEMMNSLCQIFRWDLLVGERYGIKAAVRAER 120

Query: 121 RRLDDEIESSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGG--GGAWEAV 180
           RR+D+  E  RRRHLL  DTT    LDALSQEGLSEEPVQQEKEA+GSGGG  GG WE +
Sbjct: 121 RRIDE--EEVRRRHLLLGDTTH--ALDALSQEGLSEEPVQQEKEAMGSGGGGVGGVWEMM 180

Query: 181 VAAEMRKKQRRRNGSK-KKQVIAMEE--DNDENEGAGDEEENMEVSERQREHPFIVTEPG 240
            A   +  QRRR   K + ++ +MEE  D+D++E  G E++   VSERQREHPFIVTEPG
Sbjct: 181 GAGGRKAPQRRRKNYKGRSRMASMEEDDDDDDDETEGAEDDENIVSERQREHPFIVTEPG 240

Query: 241 EVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKV 270
           EVARGKKNGLDYLFHLYEQCR+FLIQVQ IAKERGEKCPTKV
Sbjct: 241 EVARGKKNGLDYLFHLYEQCRDFLIQVQTIAKERGEKCPTKV 273

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BLAST of Cucsat.G11136.T2 vs. ExPASy Swiss-Prot
Match: Q40505 (Floricaula/leafy homolog 2 OS=Nicotiana tabacum OX=4097 GN=FL2 PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-91
Identity = 200/310 (64.52%), Postives = 228/310 (73.55%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPR-------EMVGGGSGAPLPAP-LPP-------YSLRPRELGLGG 60
           MDPE  SA+LFKW+PR        ++      P P P LPP       YS++ RE  LGG
Sbjct: 1   MDPEAFSASLFKWDPRGAMPPPTRLLEAAVAPPPPPPALPPPQPLSAAYSIKTRE--LGG 60

Query: 61  LEDLFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIK 120
           LE+LFQAYGIRYYTAAKIAELGFTV+TL+DMKDEEL+DMMNSLS IFRW+LLVGERYGIK
Sbjct: 61  LEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDDMMNSLSQIFRWELLVGERYGIK 120

Query: 121 AAVRAERRRLDDEIESSRRRHLLSNDTTTNVVLDALSQEGLSEEPV-QQEKEAVGSGGGG 180
           AA+RAERRRL++E E  RR HLLS+  T    LDALSQEGLSEEPV QQE+EAVGSGGGG
Sbjct: 121 AAIRAERRRLEEE-ELRRRGHLLSDGGTN--ALDALSQEGLSEEPVQQQEREAVGSGGGG 180

Query: 181 GAWEAVVAA-EMRKKQRRRN-----GSKKKQVIAMEEDNDENEGAGDE----EENMEVSE 240
             WE V AA   R KQRRR      G +K+   + EED +  EG  D+    + +  +SE
Sbjct: 181 TTWEVVAAAGGGRMKQRRRKKVVAAGREKRGGASAEEDEETEEGQEDDWNINDASGGISE 240

Query: 241 RQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVFFFFF 285
           RQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCR+FLIQVQNIAKERGEKCPTKV    F
Sbjct: 241 RQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVF 300

[Close]

BLAST of Cucsat.G11136.T2 vs. ExPASy Swiss-Prot
Match: Q40504 (Floricaula/leafy homolog 1 OS=Nicotiana tabacum OX=4097 GN=FL1 PE=2 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.6e-91
Identity = 200/310 (64.52%), Postives = 226/310 (72.90%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPR-------EMVGGGSGAPLPAP-LPP-------YSLRPRELGLGG 60
           MDPE  SA+LFKW+PR        ++      P P P LPP       YS+R RE  LGG
Sbjct: 1   MDPEAFSASLFKWDPRGAMPPPTRLLEAAVAPPPPPPVLPPPQPLSAAYSIRTRE--LGG 60

Query: 61  LEDLFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIK 120
           LE+LFQAYGIRYYTAAKIAELGFTV+TL+DMKDEEL+DMMNSLS IFRW+LLVGERYGIK
Sbjct: 61  LEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDDMMNSLSQIFRWELLVGERYGIK 120

Query: 121 AAVRAERRRLDDEIESSRRRHLLSNDTTTNVVLDALSQEGLSEEPV-QQEKEAVGSGGGG 180
           AA+RAERRRL++E E  RR HLLS+  T    LDALSQEGLSEEPV QQE+EAVGSGGGG
Sbjct: 121 AAIRAERRRLEEE-ELRRRSHLLSDGGTN--ALDALSQEGLSEEPVQQQEREAVGSGGGG 180

Query: 181 GAWEAVVA-AEMRKKQRRR-----NGSKKKQVIAMEEDNDENEGAGDE----EENMEVSE 240
             WE V A    R KQRRR      G +++   + EED +  EG  DE    +    +SE
Sbjct: 181 TTWEVVAAVGGGRMKQRRRKKVVSTGRERRGRASAEEDEETEEGQEDEWNINDAGGGISE 240

Query: 241 RQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVFFFFF 285
           RQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCR+FLIQVQNIAKERGEKCPTKV    F
Sbjct: 241 RQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVF 300

[Close]

BLAST of Cucsat.G11136.T2 vs. ExPASy Swiss-Prot
Match: O04064 (Floricaula/leafy homolog OS=Populus trichocarpa OX=3694 GN=FL PE=2 SV=2)

HSP 1 Score: 333.6 bits (854), Expect = 2.4e-90
Identity = 188/290 (64.83%), Postives = 215/290 (74.14%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGS------GAPLPAPLPPYSLRPRELGLGGLEDLFQAYG 60
           MDPE  +A+LFKW+ R MV   +        P   P   +++RPRE  L GLE+LFQAYG
Sbjct: 1   MDPEAFTASLFKWDTRAMVPHPNRLLEMVPPPQQPPAAAFAVRPRE--LCGLEELFQAYG 60

Query: 61  IRYYTAAKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRR 120
           IRYYTAAKIAELGFTV+TL+DMKDEEL++MMNSLS IFRWDLLVGERYGIKAAVRAERRR
Sbjct: 61  IRYYTAAKIAELGFTVNTLLDMKDEELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRR 120

Query: 121 LDDEIESSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAE 180
           LD+  E  RRR LLS D  TN  LDALSQEG SEEPVQQ+KEA GS GG G WEAV A E
Sbjct: 121 LDE--EDPRRRQLLSGDNNTN-TLDALSQEGFSEEPVQQDKEAAGS-GGRGTWEAVAAGE 180

Query: 181 MRKKQRRRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKK 240
            +K+  R+ G +K  V+ ++         GD E    + ERQREHPFIVTEPGEVARGKK
Sbjct: 181 RKKQSGRKKGQRK--VVDLD---------GDGEHGGAICERQREHPFIVTEPGEVARGKK 240

Query: 241 NGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVFFFFFFLSSIGGTAF 285
           NGLDYLFHLYEQCR+FLIQVQ+IAKERGEKCPTKV    F  +   G ++
Sbjct: 241 NGLDYLFHLYEQCRDFLIQVQSIAKERGEKCPTKVTNQVFRYAKKAGASY 273

[Close]

BLAST of Cucsat.G11136.T2 vs. NCBI nr
Match: KGN63430.1 (hypothetical protein Csa_014032 [Cucumis sativus])

HSP 1 Score: 526 bits (1354), Expect = 1.39e-185
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE
Sbjct: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
           SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR
Sbjct: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCREFLIQVQNIAKERGEKCPTKV
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269

[Close]

BLAST of Cucsat.G11136.T2 vs. NCBI nr
Match: NP_001292666.1 (floricaula/leafy homolog [Cucumis sativus] >AAC64705.1 transcription activator LFY-like protein [Cucumis sativus])

HSP 1 Score: 523 bits (1347), Expect = 1.61e-184
Identity = 268/269 (99.63%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE
Sbjct: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
           SSRRRHLLSNDTTTNVVLDALSQEG SEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR
Sbjct: 121 SSRRRHLLSNDTTTNVVLDALSQEGPSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCREFLIQVQNIAKERGEKCPTKV
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269

[Close]

BLAST of Cucsat.G11136.T2 vs. NCBI nr
Match: XP_008464361.1 (PREDICTED: floricaula/leafy homolog [Cucumis melo] >ADN33854.1 transcription activator LFY-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 513 bits (1321), Expect = 1.41e-180
Identity = 264/269 (98.14%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPETLSATLFKWEPREMV GGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVAGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           +KIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE
Sbjct: 61  SKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
           SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGG AWEAV AAEMRKKQR
Sbjct: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGG-AWEAVAAAEMRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRNGSKKKQVIA+EEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNGSKKKQVIALEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCREFLIQVQNIAKERGEKCPTKV
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 268

[Close]

BLAST of Cucsat.G11136.T2 vs. NCBI nr
Match: XP_038880047.1 (floricaula/leafy homolog [Benincasa hispida])

HSP 1 Score: 494 bits (1273), Expect = 2.74e-173
Identity = 255/269 (94.80%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPE LSATLFKW+PR MVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA
Sbjct: 1   MDPEALSATLFKWDPRGMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           AKIAELGFTVSTL+DMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEI+
Sbjct: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEID 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
           SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGG AWEAV AAE+RKKQR
Sbjct: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGG-AWEAVAAAEIRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRNGSK+KQV+ +EED+DENEGAGDEE NMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNGSKEKQVMVVEEDHDENEGAGDEE-NMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCREFLIQVQNIAKERGEKCPTKV
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 267

[Close]

BLAST of Cucsat.G11136.T2 vs. NCBI nr
Match: XP_022987259.1 (floricaula/leafy homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 493 bits (1269), Expect = 1.20e-172
Identity = 250/269 (92.94%), Postives = 258/269 (95.91%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPE LSATLFKW+PR MVGGGSGA LPAPLPPYSLRPRELGLGGLE+LFQAYGIRYYTA
Sbjct: 1   MDPEALSATLFKWDPRGMVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           AKIAELGFTVSTL+DMKDEELEDMMNSLSHIFRWDLLVGERYGIKAA+RAERRR+DDEI+
Sbjct: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAIRAERRRVDDEID 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
            SRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKE VGSGGGGGAWEAV AAEMRKKQR
Sbjct: 121 PSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEVVGSGGGGGAWEAVAAAEMRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRN SKKKQVI MEEDNDE EG G+EEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNVSKKKQVIVMEEDNDETEGGGEEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCR+FLIQVQNIAKERGEKCP KV
Sbjct: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKV 269

[Close]

BLAST of Cucsat.G11136.T2 vs. ExPASy TrEMBL
Match: A0A0A0LNE7 (Floricaula/leafy-like transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G000050 PE=3 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 6.72e-186
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE
Sbjct: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
           SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR
Sbjct: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCREFLIQVQNIAKERGEKCPTKV
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269

[Close]

BLAST of Cucsat.G11136.T2 vs. ExPASy TrEMBL
Match: Q9ZTG9 (Floricaula/leafy-like transcription factor OS=Cucumis sativus OX=3659 GN=CFL PE=2 SV=1)

HSP 1 Score: 523 bits (1347), Expect = 7.82e-185
Identity = 268/269 (99.63%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE
Sbjct: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
           SSRRRHLLSNDTTTNVVLDALSQEG SEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR
Sbjct: 121 SSRRRHLLSNDTTTNVVLDALSQEGPSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCREFLIQVQNIAKERGEKCPTKV
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269

[Close]

BLAST of Cucsat.G11136.T2 vs. ExPASy TrEMBL
Match: E5GBL3 (Floricaula/leafy-like transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 513 bits (1321), Expect = 6.83e-181
Identity = 264/269 (98.14%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPETLSATLFKWEPREMV GGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVAGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           +KIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE
Sbjct: 61  SKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
           SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGG AWEAV AAEMRKKQR
Sbjct: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGG-AWEAVAAAEMRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRNGSKKKQVIA+EEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNGSKKKQVIALEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCREFLIQVQNIAKERGEKCPTKV
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 268

[Close]

BLAST of Cucsat.G11136.T2 vs. ExPASy TrEMBL
Match: A0A1S3CLA2 (Floricaula/leafy-like transcription factor OS=Cucumis melo OX=3656 GN=LOC103502270 PE=3 SV=1)

HSP 1 Score: 513 bits (1321), Expect = 6.83e-181
Identity = 264/269 (98.14%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPETLSATLFKWEPREMV GGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVAGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           +KIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE
Sbjct: 61  SKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
           SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGG AWEAV AAEMRKKQR
Sbjct: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGG-AWEAVAAAEMRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRNGSKKKQVIA+EEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNGSKKKQVIALEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCREFLIQVQNIAKERGEKCPTKV
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 268

[Close]

BLAST of Cucsat.G11136.T2 vs. ExPASy TrEMBL
Match: A0A6J1JID4 (Floricaula/leafy-like transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111484867 PE=3 SV=1)

HSP 1 Score: 493 bits (1269), Expect = 5.79e-173
Identity = 250/269 (92.94%), Postives = 258/269 (95.91%), Query Frame = 0


Query: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60
           MDPE LSATLFKW+PR MVGGGSGA LPAPLPPYSLRPRELGLGGLE+LFQAYGIRYYTA
Sbjct: 1   MDPEALSATLFKWDPRGMVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIE 120
           AKIAELGFTVSTL+DMKDEELEDMMNSLSHIFRWDLLVGERYGIKAA+RAERRR+DDEI+
Sbjct: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAIRAERRRVDDEID 120

Query: 121 SSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVVAAEMRKKQR 180
            SRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKE VGSGGGGGAWEAV AAEMRKKQR
Sbjct: 121 PSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEVVGSGGGGGAWEAVAAAEMRKKQR 180

Query: 181 RRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           RRN SKKKQVI MEEDNDE EG G+EEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 RRNVSKKKQVIVMEEDNDETEGGGEEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCREFLIQVQNIAKERGEKCPTKV 269
           FHLYEQCR+FLIQVQNIAKERGEKCP KV
Sbjct: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKV 269

The following BLAST results are available for this feature:

BLAST of Cucsat.G11136.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22621	5.1e-93	63.87	Protein ALF OS=Petunia hybrida OX=4102 GN=ALF PE=2 SV=1	[more]
P23915	3.3e-92	68.44	Floricaula protein OS=Antirrhinum majus OX=4151 GN=FLO PE=2 SV=1	[more]
Q40505	1.3e-91	64.52	Floricaula/leafy homolog 2 OS=Nicotiana tabacum OX=4097 GN=FL2 PE=2 SV=1	[more]
Q40504	1.6e-91	64.52	Floricaula/leafy homolog 1 OS=Nicotiana tabacum OX=4097 GN=FL1 PE=2 SV=1	[more]
O04064	2.4e-90	64.83	Floricaula/leafy homolog OS=Populus trichocarpa OX=3694 GN=FL PE=2 SV=2	[more]

BLAST of Cucsat.G11136.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63430.1	1.39e-185	100.00	hypothetical protein Csa_014032 [Cucumis sativus]	[more]
NP_001292666.1	1.61e-184	99.63	floricaula/leafy homolog [Cucumis sativus] >AAC64705.1 transcription activator L...	[more]
XP_008464361.1	1.41e-180	98.14	PREDICTED: floricaula/leafy homolog [Cucumis melo] >ADN33854.1 transcription act...	[more]
XP_038880047.1	2.74e-173	94.80	floricaula/leafy homolog [Benincasa hispida]	[more]
XP_022987259.1	1.20e-172	92.94	floricaula/leafy homolog isoform X2 [Cucurbita maxima]	[more]

BLAST of Cucsat.G11136.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNE7	6.72e-186	100.00	Floricaula/leafy-like transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G0...	[more]
Q9ZTG9	7.82e-185	99.63	Floricaula/leafy-like transcription factor OS=Cucumis sativus OX=3659 GN=CFL PE=...	[more]
E5GBL3	6.83e-181	98.14	Floricaula/leafy-like transcription factor OS=Cucumis melo subsp. melo OX=412675...	[more]
A0A1S3CLA2	6.83e-181	98.14	Floricaula/leafy-like transcription factor OS=Cucumis melo OX=3656 GN=LOC1035022...	[more]
A0A6J1JID4	5.79e-173	92.94	Floricaula/leafy-like transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..215
None	No IPR available	PANTHER	PTHR36079:SF1	PROTEIN LEAFY	coord: 1..270
IPR035209	Floricaula/leafy, DNA-binding C-terminal domain	PFAM	PF17538	C_LFY_FLO	coord: 211..274 e-value: 3.0E-34 score: 118.1
IPR038276	Floricaula/leafy, C-terminal domain superfamily	GENE3D	1.10.4180.10	Protein LEAFY	coord: 204..278 e-value: 5.3E-30 score: 105.9
IPR035079	Floricaula/Leafy protein, SAM domain	PFAM	PF01698	SAM_LFY	coord: 43..118 e-value: 8.2E-45 score: 150.6
IPR002910	Floricaula/leafy protein	PANTHER	PTHR36079	PROTEIN LEAFY	coord: 1..270

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G11136	Cucsat.G11136	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11136.T2.E1	Cucsat.G11136.T2.E1	exon
Cucsat.G11136.T2.E2	Cucsat.G11136.T2.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11136.T2.C2	Cucsat.G11136.T2.C2	CDS
Cucsat.G11136.T2.C1	Cucsat.G11136.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11136.T2	Cucsat.G11136.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding