Csor.00g250050.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g250050.m01
TypemRNA
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionpentatricopeptide repeat-containing protein DOT4, chloroplastic-like
LocationCsor_Chr06: 11533498 .. 11535495 (+)
Sequence length1998
RNA-Seq ExpressionCsor.00g250050.m01
SyntenyCsor.00g250050.m01
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTCCTCCTCTCCACACCCATTCATCGTCTTCCTCTTACTCAAAAACCTAATCACACATACCATCGCCACCGACTCTTTAATAATCCCCCTCATGTTCGCACCACGACTGCTGAGAAGAATGCTCATTTATGCGTAGCCCACCAACTGTTCGACGATATTCCTATATGGGATACTTTTGCTTGGAACAATCTGATTCAAACCCATCTCACCAGCGGAGATGTGGGGCATGTTATTTCTACTTATCAACAGATGTTGTCTCGAGGGGTTCGCCCCGACAACCACACCCTTCCTCGAGTTATCTGCGCCTCCCGTCACTATGGTGATCTGCAGCTTGGCAAGCAGCTCCATGCTCAAGCCTTCAAACTTGGGCTCTTCTCTAACCTCTATGTATTTACTTCCTTGATTGAGCTGTATGGGATTCTTGACAGTGCTGACACTGCAAGGTGGCTCCATGACAAGTCGGCTTGCAGAAACGCTGTTTCTTGGACCATGTTAGCCAAGCTGTACTTGATGGAAGATAAACCCAGTTTTTCCATAGACTTGTTTTACCAAATGGTGGAGTTGGCGGCTGATATTGATGCAGTGGCATTGGCCACGGCTATTGGTGCCTGTGGTGCACGTAAACTGCTGCAACACGGAAGAAATATCCACCATGTCGCCAGAATTCATGGCTTGGAATTTGATGTCTTGGTCAGTAATTGCCTGTTGAAAATGTACCTTGACTGTAGCAGTATCAAAGATGCTAGGGGGTTGTTCAATCGAATGCCGTTCAGAGATATCATTTCGTGGACAGACCTCATCCATTTTTATGTTAAGAATGGTGGAATCAATGAGGCCTTAAAGCTCTTTCGACAGATGAATATGGATGGAGAATTGAAGCCTGATCCTCTCACAATCAGCAGCATTCTCCCAGCCTGTGGAAGAATCGCTGCTCATAAGCATGGAAGAGAGATTCACGGATACGTGCTTAAAAATTATTTTGATGACAATCTCATTGTCCAAAATGCTTTAGTTGACATGTATGTCAAATCTGGATGTATCCAATCTGCACTGAAAATTTTCTCGAGGATGAAGGAGAAAGACGTGGTTTCTTGGACTGTCATGATCTCGGGCTATAGCTTACATGGGCAAGGAAAACTTGGAGTGGGTTTGTTCCGTGAGATGGACAGGAACTTTAGGGTGCATAGAGATGAGATCACTTATACTGCAGTTTTGCAGGCTTGTAGTACTGCAAGCATGGTAGAGGAAGGGGATTTTTACTTCAATTGCATTACCGAACCAACCATGGCACACTTTGTTTTAAAGGTGGCTCTTTTAGGCCGGGCAGGACGATTCGATGAAGCAAGAACATTTGTCGATAAACATAAACTCGACAAAAATTCAGAGATTTTGAGAGCATTGCTTGATGGATGCAGGAAGCACCATCAACAGAAACTAGGGAAGCGAATCATTGAGCAGCTGTGTGATTTGGAACCTCTAAATGCCGAGAATTACGTTCTACTTTCAAACTGGTATGCCAGCAACGAAGAATGGGAGATGGTCGAGAAGCTGAGAAAAACTATTAGAGACATGGGATTAAGACCAAAGAAGGCTTACAGTTGGATGGAGTTCCGCAACAAAATCCATGCATTTGGCACAGGGGATGTATCCCACCCAAGATCGCAGGCCATATATTGGAATTTACAGTGCCTGATGAAGAAAATGGAAGAAGATGGTTTCAAGAGGAATACAGATTTCAGATTCCACGACGTGGATGAGGAGCGGGAGTGTGCTCTGATAGGACACAGCGAGCTCTTGGCAATTTCCTTCGGGCTGATTAGTACAGAAGCCGGAAGGACAATTCGTATTGCAAAGAACCTTCGTGTATGCCATAGTTGTCATGAATCCGCGAAGTTCATATCCAAAAAGGTTGGACGAGAAATCATAGTAAAAGATCCTTATGTTTTCCATCATTTCAAGGATGGCCGTTGTTCTTGTGAAGATTTTTGTTAG

mRNA sequence

ATGGATCTCCTCCTCTCCACACCCATTCATCGTCTTCCTCTTACTCAAAAACCTAATCACACATACCATCGCCACCGACTCTTTAATAATCCCCCTCATGTTCGCACCACGACTGCTGAGAAGAATGCTCATTTATGCGTAGCCCACCAACTGTTCGACGATATTCCTATATGGGATACTTTTGCTTGGAACAATCTGATTCAAACCCATCTCACCAGCGGAGATGTGGGGCATGTTATTTCTACTTATCAACAGATGTTGTCTCGAGGGGTTCGCCCCGACAACCACACCCTTCCTCGAGTTATCTGCGCCTCCCGTCACTATGGTGATCTGCAGCTTGGCAAGCAGCTCCATGCTCAAGCCTTCAAACTTGGGCTCTTCTCTAACCTCTATGTATTTACTTCCTTGATTGAGCTGTATGGGATTCTTGACAGTGCTGACACTGCAAGGTGGCTCCATGACAAGTCGGCTTGCAGAAACGCTGTTTCTTGGACCATGTTAGCCAAGCTGTACTTGATGGAAGATAAACCCAGTTTTTCCATAGACTTGTTTTACCAAATGGTGGAGTTGGCGGCTGATATTGATGCAGTGGCATTGGCCACGGCTATTGGTGCCTGTGGTGCACGTAAACTGCTGCAACACGGAAGAAATATCCACCATGTCGCCAGAATTCATGGCTTGGAATTTGATGTCTTGGTCAGTAATTGCCTGTTGAAAATGTACCTTGACTGTAGCAGTATCAAAGATGCTAGGGGGTTGTTCAATCGAATGCCGTTCAGAGATATCATTTCGTGGACAGACCTCATCCATTTTTATGTTAAGAATGGTGGAATCAATGAGGCCTTAAAGCTCTTTCGACAGATGAATATGGATGGAGAATTGAAGCCTGATCCTCTCACAATCAGCAGCATTCTCCCAGCCTGTGGAAGAATCGCTGCTCATAAGCATGGAAGAGAGATTCACGGATACGTGCTTAAAAATTATTTTGATGACAATCTCATTGTCCAAAATGCTTTAGTTGACATGTATGTCAAATCTGGATGTATCCAATCTGCACTGAAAATTTTCTCGAGGATGAAGGAGAAAGACGTGGTTTCTTGGACTGTCATGATCTCGGGCTATAGCTTACATGGGCAAGGAAAACTTGGAGTGGGTTTGTTCCGTGAGATGGACAGGAACTTTAGGGTGCATAGAGATGAGATCACTTATACTGCAGTTTTGCAGGCTTGTAGTACTGCAAGCATGGTAGAGGAAGGGGATTTTTACTTCAATTGCATTACCGAACCAACCATGGCACACTTTGTTTTAAAGGTGGCTCTTTTAGGCCGGGCAGGACGATTCGATGAAGCAAGAACATTTGTCGATAAACATAAACTCGACAAAAATTCAGAGATTTTGAGAGCATTGCTTGATGGATGCAGGAAGCACCATCAACAGAAACTAGGGAAGCGAATCATTGAGCAGCTGTGTGATTTGGAACCTCTAAATGCCGAGAATTACGTTCTACTTTCAAACTGGTATGCCAGCAACGAAGAATGGGAGATGGTCGAGAAGCTGAGAAAAACTATTAGAGACATGGGATTAAGACCAAAGAAGGCTTACAGTTGGATGGAGTTCCGCAACAAAATCCATGCATTTGGCACAGGGGATGTATCCCACCCAAGATCGCAGGCCATATATTGGAATTTACAGTGCCTGATGAAGAAAATGGAAGAAGATGGTTTCAAGAGGAATACAGATTTCAGATTCCACGACGTGGATGAGGAGCGGGAGTGTGCTCTGATAGGACACAGCGAGCTCTTGGCAATTTCCTTCGGGCTGATTAGTACAGAAGCCGGAAGGACAATTCGTATTGCAAAGAACCTTCGTGTATGCCATAGTTGTCATGAATCCGCGAAGTTCATATCCAAAAAGGTTGGACGAGAAATCATAGTAAAAGATCCTTATGTTTTCCATCATTTCAAGGATGGCCGTTGTTCTTGTGAAGATTTTTGTTAG

Coding sequence (CDS)

ATGGATCTCCTCCTCTCCACACCCATTCATCGTCTTCCTCTTACTCAAAAACCTAATCACACATACCATCGCCACCGACTCTTTAATAATCCCCCTCATGTTCGCACCACGACTGCTGAGAAGAATGCTCATTTATGCGTAGCCCACCAACTGTTCGACGATATTCCTATATGGGATACTTTTGCTTGGAACAATCTGATTCAAACCCATCTCACCAGCGGAGATGTGGGGCATGTTATTTCTACTTATCAACAGATGTTGTCTCGAGGGGTTCGCCCCGACAACCACACCCTTCCTCGAGTTATCTGCGCCTCCCGTCACTATGGTGATCTGCAGCTTGGCAAGCAGCTCCATGCTCAAGCCTTCAAACTTGGGCTCTTCTCTAACCTCTATGTATTTACTTCCTTGATTGAGCTGTATGGGATTCTTGACAGTGCTGACACTGCAAGGTGGCTCCATGACAAGTCGGCTTGCAGAAACGCTGTTTCTTGGACCATGTTAGCCAAGCTGTACTTGATGGAAGATAAACCCAGTTTTTCCATAGACTTGTTTTACCAAATGGTGGAGTTGGCGGCTGATATTGATGCAGTGGCATTGGCCACGGCTATTGGTGCCTGTGGTGCACGTAAACTGCTGCAACACGGAAGAAATATCCACCATGTCGCCAGAATTCATGGCTTGGAATTTGATGTCTTGGTCAGTAATTGCCTGTTGAAAATGTACCTTGACTGTAGCAGTATCAAAGATGCTAGGGGGTTGTTCAATCGAATGCCGTTCAGAGATATCATTTCGTGGACAGACCTCATCCATTTTTATGTTAAGAATGGTGGAATCAATGAGGCCTTAAAGCTCTTTCGACAGATGAATATGGATGGAGAATTGAAGCCTGATCCTCTCACAATCAGCAGCATTCTCCCAGCCTGTGGAAGAATCGCTGCTCATAAGCATGGAAGAGAGATTCACGGATACGTGCTTAAAAATTATTTTGATGACAATCTCATTGTCCAAAATGCTTTAGTTGACATGTATGTCAAATCTGGATGTATCCAATCTGCACTGAAAATTTTCTCGAGGATGAAGGAGAAAGACGTGGTTTCTTGGACTGTCATGATCTCGGGCTATAGCTTACATGGGCAAGGAAAACTTGGAGTGGGTTTGTTCCGTGAGATGGACAGGAACTTTAGGGTGCATAGAGATGAGATCACTTATACTGCAGTTTTGCAGGCTTGTAGTACTGCAAGCATGGTAGAGGAAGGGGATTTTTACTTCAATTGCATTACCGAACCAACCATGGCACACTTTGTTTTAAAGGTGGCTCTTTTAGGCCGGGCAGGACGATTCGATGAAGCAAGAACATTTGTCGATAAACATAAACTCGACAAAAATTCAGAGATTTTGAGAGCATTGCTTGATGGATGCAGGAAGCACCATCAACAGAAACTAGGGAAGCGAATCATTGAGCAGCTGTGTGATTTGGAACCTCTAAATGCCGAGAATTACGTTCTACTTTCAAACTGGTATGCCAGCAACGAAGAATGGGAGATGGTCGAGAAGCTGAGAAAAACTATTAGAGACATGGGATTAAGACCAAAGAAGGCTTACAGTTGGATGGAGTTCCGCAACAAAATCCATGCATTTGGCACAGGGGATGTATCCCACCCAAGATCGCAGGCCATATATTGGAATTTACAGTGCCTGATGAAGAAAATGGAAGAAGATGGTTTCAAGAGGAATACAGATTTCAGATTCCACGACGTGGATGAGGAGCGGGAGTGTGCTCTGATAGGACACAGCGAGCTCTTGGCAATTTCCTTCGGGCTGATTAGTACAGAAGCCGGAAGGACAATTCGTATTGCAAAGAACCTTCGTGTATGCCATAGTTGTCATGAATCCGCGAAGTTCATATCCAAAAAGGTTGGACGAGAAATCATAGTAAAAGATCCTTATGTTTTCCATCATTTCAAGGATGGCCGTTGTTCTTGTGAAGATTTTTGTTAG

Protein sequence

MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKMYLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLTISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMKEKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGDFYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCSCEDFC
Homology
BLAST of Csor.00g250050.m01 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.5e-124
Identity = 233/630 (36.98%), Postives = 360/630 (57.14%), Query Frame = 0

Query: 41  KNAHLCVAHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPR 100
           KN  +  A ++FD++   D  +WN++I  ++++G     +S + QML  G+  D  T+  
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301

Query: 101 VICASRHYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRN 160
           V         + LG+ +H+   K           +L+++Y      D+A+ +  + + R+
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361

Query: 161 AVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHH 220
            VS+T +   Y  E     ++ LF +M E     D   +   +  C   +LL  G+ +H 
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421

Query: 221 VARIHGLEFDVLVSNCLLKMYLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINE 280
             + + L FD+ VSN L+ MY  C S+++A  +F+ M  +DIISW  +I  Y KN   NE
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481

Query: 281 ALKLFRQMNMDGELKPDPLTISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALV 340
           AL LF  +  +    PD  T++ +LPAC  ++A   GREIHGY+++N +  +  V N+LV
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 341 DMYVKSGCIQSALKIFSRMKEKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDE 400
           DMY K G +  A  +F  +  KD+VSWTVMI+GY +HG GK  + LF +M R   +  DE
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADE 601

Query: 401 ITYTAVLQACSTASMVEEGDFYFN-----CITEPTMAHFVLKVALLGRAGRFDEARTFVD 460
           I++ ++L ACS + +V+EG  +FN     C  EPT+ H+   V +L R G   +A  F++
Sbjct: 602 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 661

Query: 461 KHKLDKNSEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEM 520
              +  ++ I  ALL GCR HH  KL +++ E++ +LEP N   YVL++N YA  E+WE 
Sbjct: 662 NMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQ 721

Query: 521 VEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGF 580
           V++LRK I   GLR     SW+E + +++ F  GD S+P ++ I   L+ +  +M E+G+
Sbjct: 722 VKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY 781

Query: 581 KRNTDFRFHDVDE-ERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKF 640
              T +   D +E E+E AL GHSE LA++ G+IS+  G+ IR+ KNLRVC  CHE AKF
Sbjct: 782 SPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKF 841

Query: 641 ISKKVGREIIVKDPYVFHHFKDGRCSCEDF 665
           +SK   REI+++D   FH FKDG CSC  F
Sbjct: 842 MSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870

BLAST of Csor.00g250050.m01 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 7.0e-119
Identity = 225/626 (35.94%), Postives = 357/626 (57.03%), Query Frame = 0

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRH 107
           A Q+FDD+P    F WN +I+ +  +      +  Y  M    V PD+ T P ++ A   
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 108 YGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSAC--RNAVSWT 167
              LQ+G+ +HAQ F+LG  ++++V   LI LY       +AR + +      R  VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 168 MLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIH 227
            +   Y    +P  ++++F QM ++    D VAL + + A    + L+ GR+IH      
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 228 GLEF--DVLVSNCLLKMYLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALK 287
           GLE   D+L+S  L  MY  C  +  A+ LF++M   ++I W  +I  Y KNG   EA+ 
Sbjct: 252 GLEIEPDLLIS--LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 311

Query: 288 LFRQMNMDGELKPDPLTISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMY 347
           +F +M ++ +++PD ++I+S + AC ++ + +  R ++ YV ++ + D++ + +AL+DM+
Sbjct: 312 MFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 371

Query: 348 VKSGCIQSALKIFSRMKEKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITY 407
            K G ++ A  +F R  ++DVV W+ MI GY LHG+ +  + L+R M+R   VH +++T+
Sbjct: 372 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHPNDVTF 431

Query: 408 TAVLQACSTASMVEEGDFYFNCITE----PTMAHFVLKVALLGRAGRFDEARTFVDKHKL 467
             +L AC+ + MV EG ++FN + +    P   H+   + LLGRAG  D+A   +    +
Sbjct: 432 LGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 491

Query: 468 DKNSEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKL 527
                +  ALL  C+KH   +LG+   +QL  ++P N  +YV LSN YA+   W+ V ++
Sbjct: 492 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 551

Query: 528 RKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNT 587
           R  +++ GL      SW+E R ++ AF  GD SHPR + I   ++ +  +++E GF  N 
Sbjct: 552 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 611

Query: 588 DFRFHDV-DEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKK 647
           D   HD+ DEE E  L  HSE +AI++GLIST  G  +RI KNLR C +CH + K ISK 
Sbjct: 612 DASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKL 671

Query: 648 VGREIIVKDPYVFHHFKDGRCSCEDF 665
           V REI+V+D   FHHFKDG CSC D+
Sbjct: 672 VDREIVVRDTNRFHHFKDGVCSCGDY 693

BLAST of Csor.00g250050.m01 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.7e-112
Identity = 226/656 (34.45%), Postives = 350/656 (53.35%), Query Frame = 0

Query: 51  LFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGD 110
           LF  +      AW ++I+           ++++ +M + G  PD++  P V+ +     D
Sbjct: 61  LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120

Query: 111 LQLGKQLHAQAFKLGLFSNLYVFTSLIELYGIL--------------------------- 170
           L+ G+ +H    +LG+  +LY   +L+ +Y  L                           
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180

Query: 171 ---------DSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADI 230
                       D+ R + +    ++ VS+  +   Y        ++ +  +M       
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240

Query: 231 DAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKMYLDCSSIKDARGLF 290
           D+  L++ +        +  G+ IH      G++ DV + + L+ MY   + I+D+  +F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300

Query: 291 NRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLTISSILPACGRIAAH 350
           +R+  RD ISW  L+  YV+NG  NEAL+LFRQM +  ++KP  +  SS++PAC  +A  
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATL 360

Query: 351 KHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMKEKDVVSWTVMISGY 410
             G+++HGYVL+  F  N+ + +ALVDMY K G I++A KIF RM   D VSWT +I G+
Sbjct: 361 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 420

Query: 411 SLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGDFYFNCITE-----P 470
           +LHG G   V LF EM R   V  +++ + AVL ACS   +V+E   YFN +T+      
Sbjct: 421 ALHGHGHEAVSLFEEMKRQ-GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 480

Query: 471 TMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQKLGKRIIEQL 530
            + H+     LLGRAG+ +EA  F+ K  ++    +   LL  C  H   +L +++ E++
Sbjct: 481 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 540

Query: 531 CDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTG 590
             ++  N   YVL+ N YASN  W+ + KLR  +R  GLR K A SW+E +NK H F +G
Sbjct: 541 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 600

Query: 591 DVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALI-GHSELLAISFGLI 650
           D SHP    I   L+ +M++ME++G+  +T    HDVDEE +  L+ GHSE LA++FG+I
Sbjct: 601 DRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII 660

Query: 651 STEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCSCEDF 665
           +TE G TIR+ KN+R+C  CH + KFISK   REIIV+D   FHHF  G CSC D+
Sbjct: 661 NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714

BLAST of Csor.00g250050.m01 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.3e-108
Identity = 215/622 (34.57%), Postives = 339/622 (54.50%), Query Frame = 0

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRH 107
           A ++FD +P  D  +WN ++  +  +G     +   + M    ++P   T+  V+ A   
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248

Query: 108 YGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTML 167
              + +GK++H  A + G  S + + T+L+++Y    S +TAR L D    RN VSW  +
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308

Query: 168 AKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGL 227
              Y+  + P  ++ +F +M++       V++  A+ AC     L+ GR IH ++   GL
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368

Query: 228 EFDVLVSNCLLKMYLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQ 287
           + +V V N L+ MY  C  +  A  +F ++  R ++SW  +I  + +NG   +AL  F Q
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428

Query: 288 MNMDGELKPDPLTISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSG 347
           M     +KPD  T  S++ A   ++   H + IHG V+++  D N+ V  ALVDMY K G
Sbjct: 429 MR-SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 488

Query: 348 CIQSALKIFSRMKEKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVL 407
            I  A  IF  M E+ V +W  MI GY  HG GK  + LF EM +   +  + +T+ +V+
Sbjct: 489 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG-TIKPNGVTFLSVI 548

Query: 408 QACSTASMVEEG--DFYF---NCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKN 467
            ACS + +VE G   FY    N   E +M H+   V LLGRAGR +EA  F+ +  +   
Sbjct: 549 SACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 608

Query: 468 SEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKT 527
             +  A+L  C+ H      ++  E+L +L P +   +VLL+N Y +   WE V ++R +
Sbjct: 609 VNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS 668

Query: 528 IRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFR 587
           +   GLR     S +E +N++H+F +G  +HP S+ IY  L+ L+  ++E G+  +T+  
Sbjct: 669 MLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV 728

Query: 588 FHDVDEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGRE 647
               ++ +E  L  HSE LAISFGL++T AG TI + KNLRVC  CH + K+IS   GRE
Sbjct: 729 LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 788

Query: 648 IIVKDPYVFHHFKDGRCSCEDF 665
           I+V+D   FHHFK+G CSC D+
Sbjct: 789 IVVRDMQRFHHFKNGACSCGDY 808

BLAST of Csor.00g250050.m01 vs. ExPASy Swiss-Prot
Match: Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.3e-106
Identity = 225/621 (36.23%), Postives = 335/621 (53.95%), Query Frame = 0

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRH 107
           A  LFD +P  D  +WN +I  +  +G     +  +  M    V PD  TL  VI A   
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 108 YGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTML 167
            GD +LG+ +HA     G   ++ V  SL ++Y    S   A  L  +   ++ VSWT +
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369

Query: 168 AKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGL 227
              Y     P  +ID +  M + +   D + +A  + AC     L  G  +H +A    L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429

Query: 228 EFDVLVSNCLLKMYLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQ 287
              V+V+N L+ MY  C  I  A  +F+ +P +++ISWT +I     N    EAL   RQ
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489

Query: 288 MNMDGELKPDPLTISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSG 347
           M M   L+P+ +T+++ L AC RI A   G+EIH +VL+     +  + NAL+DMYV+ G
Sbjct: 490 MKM--TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 549

Query: 348 CIQSALKIFSRMKEKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVL 407
            + +A   F+  K KDV SW ++++GYS  GQG + V LF  M ++ RV  DEIT+ ++L
Sbjct: 550 RMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKS-RVRPDEITFISLL 609

Query: 408 QACSTASMVEEGDFYFNCITE----PTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNS 467
             CS + MV +G  YF+ + +    P + H+   V LLGRAG   EA  F+ K  +  + 
Sbjct: 610 CGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP 669

Query: 468 EILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTI 527
            +  ALL+ CR HH+  LG+   + + +L+  +   Y+LL N YA   +W  V K+R+ +
Sbjct: 670 AVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMM 729

Query: 528 RDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRF 587
           ++ GL      SW+E + K+HAF + D  HP+++ I   L+   +KM E G  + ++   
Sbjct: 730 KENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSS 789

Query: 588 HDVDE-ERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGRE 647
            D  E  R+    GHSE  AI+FGLI+T  G  I + KNL +C +CH++ KFISK V RE
Sbjct: 790 MDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRRE 849

Query: 648 IIVKDPYVFHHFKDGRCSCED 664
           I V+D   FHHFKDG CSC D
Sbjct: 850 ISVRDAEHFHHFKDGECSCGD 866

BLAST of Csor.00g250050.m01 vs. NCBI nr
Match: KAG6597728.1 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1380 bits (3572), Expect = 0.0
Identity = 665/665 (100.00%), Postives = 665/665 (100.00%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT
Sbjct: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT
Sbjct: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK
Sbjct: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD
Sbjct: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
           FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK
Sbjct: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR
Sbjct: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL
Sbjct: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS
Sbjct: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660

Query: 661 CEDFC 665
           CEDFC
Sbjct: 661 CEDFC 665

BLAST of Csor.00g250050.m01 vs. NCBI nr
Match: KAG7029175.1 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1377 bits (3564), Expect = 0.0
Identity = 663/665 (99.70%), Postives = 664/665 (99.85%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT
Sbjct: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT
Sbjct: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK
Sbjct: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKD+VSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD
Sbjct: 361 EKDMVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
           FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK
Sbjct: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR
Sbjct: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL
Sbjct: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFIS KVGREIIVKDPYVFHHFKDGRCS
Sbjct: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660

Query: 661 CEDFC 665
           CEDFC
Sbjct: 661 CEDFC 665

BLAST of Csor.00g250050.m01 vs. NCBI nr
Match: XP_023539701.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1373 bits (3554), Expect = 0.0
Identity = 660/665 (99.25%), Postives = 664/665 (99.85%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           M+LLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT
Sbjct: 1   MNLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           IDLFYQMVELAADIDAVALATA+GACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATALGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT
Sbjct: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK
Sbjct: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKD+VSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD
Sbjct: 361 EKDMVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
           FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK
Sbjct: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR
Sbjct: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL
Sbjct: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRI+KNLRVCHSCHESAKFIS KVGREIIVKDPYVFHHFKDGRCS
Sbjct: 601 LAISFGLISTEAGRTIRISKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660

Query: 661 CEDFC 665
           CEDFC
Sbjct: 661 CEDFC 665

BLAST of Csor.00g250050.m01 vs. NCBI nr
Match: XP_022972268.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1365 bits (3534), Expect = 0.0
Identity = 657/665 (98.80%), Postives = 661/665 (99.40%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT
Sbjct: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           +DLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM
Sbjct: 181 LDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT
Sbjct: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGRIAAHKHGREIHGYVLKN FDDNLIVQNALVDMYVKSGCIQSALKIFSRMK
Sbjct: 301 ISSILPACGRIAAHKHGREIHGYVLKNDFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKD+VSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQ+CSTASMVEEGD
Sbjct: 361 EKDMVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQSCSTASMVEEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
           FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQ K
Sbjct: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQHK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR
Sbjct: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECA IGHSEL
Sbjct: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECAPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRI+KNLRVCHSCHESAKFIS KVGREIIVKDPYVFHHFKDGRCS
Sbjct: 601 LAISFGLISTEAGRTIRISKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660

Query: 661 CEDFC 665
           CEDFC
Sbjct: 661 CEDFC 665

BLAST of Csor.00g250050.m01 vs. NCBI nr
Match: XP_022932569.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1362 bits (3525), Expect = 0.0
Identity = 655/665 (98.50%), Postives = 659/665 (99.10%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           MDLLLSTPIHRLPLTQKPNHTY RHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT
Sbjct: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFD+LVSNCLLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDC SIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT
Sbjct: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGRI AHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK
Sbjct: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKD+VSWTV+ISGYSLHGQGKLGVGLFREMDRNF VHRDEITYTAVLQACSTASMVEEGD
Sbjct: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
           FYFNCITEPTMAHFVLKVALLGRAGRF+EARTFVDKHKLDKN EILRALLDGCRKHHQQK
Sbjct: 421 FYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR
Sbjct: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL
Sbjct: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFIS KVGREIIVKDPYVFHHFKDGRCS
Sbjct: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660

Query: 661 CEDFC 665
           CEDFC
Sbjct: 661 CEDFC 665

BLAST of Csor.00g250050.m01 vs. ExPASy TrEMBL
Match: A0A6J1I9E1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470851 PE=3 SV=1)

HSP 1 Score: 1365 bits (3534), Expect = 0.0
Identity = 657/665 (98.80%), Postives = 661/665 (99.40%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT
Sbjct: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           +DLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM
Sbjct: 181 LDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT
Sbjct: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGRIAAHKHGREIHGYVLKN FDDNLIVQNALVDMYVKSGCIQSALKIFSRMK
Sbjct: 301 ISSILPACGRIAAHKHGREIHGYVLKNDFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKD+VSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQ+CSTASMVEEGD
Sbjct: 361 EKDMVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQSCSTASMVEEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
           FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQ K
Sbjct: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQHK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR
Sbjct: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECA IGHSEL
Sbjct: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECAPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRI+KNLRVCHSCHESAKFIS KVGREIIVKDPYVFHHFKDGRCS
Sbjct: 601 LAISFGLISTEAGRTIRISKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660

Query: 661 CEDFC 665
           CEDFC
Sbjct: 661 CEDFC 665

BLAST of Csor.00g250050.m01 vs. ExPASy TrEMBL
Match: A0A6J1EXC6 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439085 PE=3 SV=1)

HSP 1 Score: 1362 bits (3525), Expect = 0.0
Identity = 655/665 (98.50%), Postives = 659/665 (99.10%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           MDLLLSTPIHRLPLTQKPNHTY RHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT
Sbjct: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFD+LVSNCLLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDC SIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT
Sbjct: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGRI AHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK
Sbjct: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKD+VSWTV+ISGYSLHGQGKLGVGLFREMDRNF VHRDEITYTAVLQACSTASMVEEGD
Sbjct: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
           FYFNCITEPTMAHFVLKVALLGRAGRF+EARTFVDKHKLDKN EILRALLDGCRKHHQQK
Sbjct: 421 FYFNCITEPTMAHFVLKVALLGRAGRFNEARTFVDKHKLDKNLEILRALLDGCRKHHQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR
Sbjct: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL
Sbjct: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFIS KVGREIIVKDPYVFHHFKDGRCS
Sbjct: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISNKVGREIIVKDPYVFHHFKDGRCS 660

Query: 661 CEDFC 665
           CEDFC
Sbjct: 661 CEDFC 665

BLAST of Csor.00g250050.m01 vs. ExPASy TrEMBL
Match: A0A1S3CPR5 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103502829 PE=3 SV=1)

HSP 1 Score: 1154 bits (2985), Expect = 0.0
Identity = 548/665 (82.41%), Postives = 600/665 (90.23%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           M+LLLST  H LP+TQKP H YHRH  FNN PHVRTTT E  A LCVAHQ+FD+IPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPYHAYHRHPPFNNLPHVRTTTVENYADLCVAHQVFDEIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLT+GD GHVIS Y+QML RGVRPD HTLPR+ICA+R YGDL +GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDWGHVISIYRQMLFRGVRPDKHTLPRIICATRQYGDLPVGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLG  S+LYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPSF+
Sbjct: 121 AFKLGFSSDLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTILAKLYLREDKPSFA 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           IDLFYQMVELA DID+VALATAIGACGA K+L HGRNIHH+ARIHGLEF++LVSN LLKM
Sbjct: 181 IDLFYQMVELADDIDSVALATAIGACGALKMLHHGRNIHHLARIHGLEFNILVSNSLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDC SIKDARG F++MP +D+ISWT+LIH YVK GGINEA KLFRQMNMDGELKPDPLT
Sbjct: 241 YLDCDSIKDARGFFDQMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGR+AAHKHG+EIHGYVLKN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVLKNGFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKD+VSW++M  GYSLHGQGKLGVGLFREM++N ++HRDEITYTAVL AC+TA+MV+EGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVGLFREMEKNLKMHRDEITYTAVLHACTTANMVDEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
           FYF+ IT+PT+AH  LKVALL RAGR DEARTFV+K KL+K+ EILRALLDGCR H QQK
Sbjct: 421 FYFSRITKPTVAHIALKVALLARAGRLDEARTFVEKKKLNKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLN ENY+LLSNWYA N++W+MVE+LR+TIRDMGLRPKKAYSW+EF 
Sbjct: 481 LGKRIIEQLCDLEPLNTENYILLSNWYACNKKWDMVEELRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIH FGTGDVSHPRSQ IYWNLQCLMKKMEEDG K N +F  HDVDEEREC  IGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKKMEEDGSKTNPEFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTIRI KNLRVCHSCHESAKFISK VGREIIVKDPYVFHHFKDG CS
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS 660

Query: 661 CEDFC 665
           CE+FC
Sbjct: 661 CENFC 665

BLAST of Csor.00g250050.m01 vs. ExPASy TrEMBL
Match: A0A6J1E0A4 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111025202 PE=3 SV=1)

HSP 1 Score: 1140 bits (2949), Expect = 0.0
Identity = 550/665 (82.71%), Postives = 588/665 (88.42%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           MDLLLST   RLP+T K + TY R R FNNPPHVRT   E  A+LC AH  FD+IP WDT
Sbjct: 1   MDLLLSTHFRRLPITPKTDLTYRRRRPFNNPPHVRTAITENYANLCEAHHPFDEIPTWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLT+GDVG VISTY+QML RGVRPDNHTLPR+I ASR  GDLQ+GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDVGLVISTYEQMLLRGVRPDNHTLPRIIGASRQCGDLQVGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
            FKLG  SNLYV TSLIELYGILD ADTA+WLHDKSACRN+VSWTMLAKLY+MEDKPSF+
Sbjct: 121 VFKLGFSSNLYVITSLIELYGILDGADTAKWLHDKSACRNSVSWTMLAKLYVMEDKPSFA 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           IDLFYQMVELAADIDAVALATAIGACG+ KLLQHGRNIH +AR HGLEFDVLVSN LLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATAIGACGSLKLLQHGRNIHLLARTHGLEFDVLVSNSLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           YLDC SI+DARG FNRMP +D+ISWT+LI  YVK GGINE  KLFRQMNMDG LKPDP+T
Sbjct: 241 YLDCGSIRDARGFFNRMPSKDVISWTELIQAYVKKGGINEGFKLFRQMNMDGGLKPDPIT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGR+AAHKHGREIHGYVLK+  D NLIVQNALVDMYVKSGCIQSALKIFSRMK
Sbjct: 301 ISSILPACGRMAAHKHGREIHGYVLKSAIDVNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKD +SWTVMI GYSLHGQGKLGV LFR M+RN R+HRDEITYT+VL ACSTAS+VEEGD
Sbjct: 361 EKDAISWTVMILGYSLHGQGKLGVSLFRLMERNLRMHRDEITYTSVLHACSTASLVEEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
           FYFNCI EPT +HF LKVALL RAGR DEAR FV++HKLDK+ EILRALLDGCR H  +K
Sbjct: 421 FYFNCIMEPTFSHFALKVALLARAGRLDEARAFVEQHKLDKHPEILRALLDGCRTHRDKK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENY+LLSNWYA N + +MVEK R+ +RDMGLRPKKAYSWMEFR
Sbjct: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNGKLDMVEKSREIVRDMGLRPKKAYSWMEFR 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIH FGTGDVSHPRSQ IYWNL+CLMKKME+DG K   DF FHDVDEEREC LIGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLECLMKKMEDDGLKPKPDFSFHDVDEERECVLIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCS 660
           LAISFGLISTEAGRTI I KNLRVCHSCHESAKFISK VGREIIVKDPYVFHHFKDG CS
Sbjct: 601 LAISFGLISTEAGRTICITKNLRVCHSCHESAKFISKIVGREIIVKDPYVFHHFKDGCCS 660

Query: 661 CEDFC 665
           CEDFC
Sbjct: 661 CEDFC 665

BLAST of Csor.00g250050.m01 vs. ExPASy TrEMBL
Match: A0A0A0L9N4 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G722890 PE=3 SV=1)

HSP 1 Score: 1078 bits (2787), Expect = 0.0
Identity = 520/659 (78.91%), Postives = 574/659 (87.10%), Query Frame = 0

Query: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
           M+LLLST  H LP+TQKPNH YHRH  FNN PHVRT T E  A+LCVAHQ+FDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
           FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
           AFKLG  SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
           +DLFYQMVELA DIDAVALATAIGACGA K+L HGRNIHH+AR+HGLEF++LVSN LLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
           Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
           ISSILPACGR+AAHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGD 420
           EKD+VSW++M  GYSLHGQGKLGV LFREM++NF++ RDEITYTAVL AC+TA+MV+EGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420

Query: 421 FYFNCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQK 480
            YF+CIT+PT+AH  LKVALL RAGR DEARTFV+K KLDK+ EILRALLDGCR H QQK
Sbjct: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFR 540
           LGKRIIEQLCDLEPLNAENY+LLSNWYA NE+W+MVEKLR+TIRDMGLRPKKAYSW+EF 
Sbjct: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALIGHSEL 600
           NKIH FGTGDVSHPRSQ IYWNLQCLMK+MEEDG K N DF  HDVDEEREC  IGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRC 659
           LAISFGLISTEAGRTIRI KNLR+  +                +VK    F +F DGRC
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRMVAA----------------LVK---TFVNFIDGRC 640

BLAST of Csor.00g250050.m01 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 448.4 bits (1152), Expect = 1.0e-125
Identity = 233/630 (36.98%), Postives = 360/630 (57.14%), Query Frame = 0

Query: 41  KNAHLCVAHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPR 100
           KN  +  A ++FD++   D  +WN++I  ++++G     +S + QML  G+  D  T+  
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301

Query: 101 VICASRHYGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRN 160
           V         + LG+ +H+   K           +L+++Y      D+A+ +  + + R+
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361

Query: 161 AVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHH 220
            VS+T +   Y  E     ++ LF +M E     D   +   +  C   +LL  G+ +H 
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421

Query: 221 VARIHGLEFDVLVSNCLLKMYLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINE 280
             + + L FD+ VSN L+ MY  C S+++A  +F+ M  +DIISW  +I  Y KN   NE
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481

Query: 281 ALKLFRQMNMDGELKPDPLTISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALV 340
           AL LF  +  +    PD  T++ +LPAC  ++A   GREIHGY+++N +  +  V N+LV
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 341 DMYVKSGCIQSALKIFSRMKEKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDE 400
           DMY K G +  A  +F  +  KD+VSWTVMI+GY +HG GK  + LF +M R   +  DE
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADE 601

Query: 401 ITYTAVLQACSTASMVEEGDFYFN-----CITEPTMAHFVLKVALLGRAGRFDEARTFVD 460
           I++ ++L ACS + +V+EG  +FN     C  EPT+ H+   V +L R G   +A  F++
Sbjct: 602 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 661

Query: 461 KHKLDKNSEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEM 520
              +  ++ I  ALL GCR HH  KL +++ E++ +LEP N   YVL++N YA  E+WE 
Sbjct: 662 NMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQ 721

Query: 521 VEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGF 580
           V++LRK I   GLR     SW+E + +++ F  GD S+P ++ I   L+ +  +M E+G+
Sbjct: 722 VKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY 781

Query: 581 KRNTDFRFHDVDE-ERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKF 640
              T +   D +E E+E AL GHSE LA++ G+IS+  G+ IR+ KNLRVC  CHE AKF
Sbjct: 782 SPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKF 841

Query: 641 ISKKVGREIIVKDPYVFHHFKDGRCSCEDF 665
           +SK   REI+++D   FH FKDG CSC  F
Sbjct: 842 MSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870

BLAST of Csor.00g250050.m01 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 429.5 bits (1103), Expect = 5.0e-120
Identity = 225/626 (35.94%), Postives = 357/626 (57.03%), Query Frame = 0

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRH 107
           A Q+FDD+P    F WN +I+ +  +      +  Y  M    V PD+ T P ++ A   
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 108 YGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSAC--RNAVSWT 167
              LQ+G+ +HAQ F+LG  ++++V   LI LY       +AR + +      R  VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 168 MLAKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIH 227
            +   Y    +P  ++++F QM ++    D VAL + + A    + L+ GR+IH      
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 228 GLEF--DVLVSNCLLKMYLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALK 287
           GLE   D+L+S  L  MY  C  +  A+ LF++M   ++I W  +I  Y KNG   EA+ 
Sbjct: 252 GLEIEPDLLIS--LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 311

Query: 288 LFRQMNMDGELKPDPLTISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMY 347
           +F +M ++ +++PD ++I+S + AC ++ + +  R ++ YV ++ + D++ + +AL+DM+
Sbjct: 312 MFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 371

Query: 348 VKSGCIQSALKIFSRMKEKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITY 407
            K G ++ A  +F R  ++DVV W+ MI GY LHG+ +  + L+R M+R   VH +++T+
Sbjct: 372 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHPNDVTF 431

Query: 408 TAVLQACSTASMVEEGDFYFNCITE----PTMAHFVLKVALLGRAGRFDEARTFVDKHKL 467
             +L AC+ + MV EG ++FN + +    P   H+   + LLGRAG  D+A   +    +
Sbjct: 432 LGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 491

Query: 468 DKNSEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKL 527
                +  ALL  C+KH   +LG+   +QL  ++P N  +YV LSN YA+   W+ V ++
Sbjct: 492 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 551

Query: 528 RKTIRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNT 587
           R  +++ GL      SW+E R ++ AF  GD SHPR + I   ++ +  +++E GF  N 
Sbjct: 552 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 611

Query: 588 DFRFHDV-DEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKK 647
           D   HD+ DEE E  L  HSE +AI++GLIST  G  +RI KNLR C +CH + K ISK 
Sbjct: 612 DASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKL 671

Query: 648 VGREIIVKDPYVFHHFKDGRCSCEDF 665
           V REI+V+D   FHHFKDG CSC D+
Sbjct: 672 VDREIVVRDTNRFHHFKDGVCSCGDY 693

BLAST of Csor.00g250050.m01 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-113
Identity = 226/656 (34.45%), Postives = 350/656 (53.35%), Query Frame = 0

Query: 51  LFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGD 110
           LF  +      AW ++I+           ++++ +M + G  PD++  P V+ +     D
Sbjct: 61  LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120

Query: 111 LQLGKQLHAQAFKLGLFSNLYVFTSLIELYGIL--------------------------- 170
           L+ G+ +H    +LG+  +LY   +L+ +Y  L                           
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180

Query: 171 ---------DSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFSIDLFYQMVELAADI 230
                       D+ R + +    ++ VS+  +   Y        ++ +  +M       
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240

Query: 231 DAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKMYLDCSSIKDARGLF 290
           D+  L++ +        +  G+ IH      G++ DV + + L+ MY   + I+D+  +F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300

Query: 291 NRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLTISSILPACGRIAAH 350
           +R+  RD ISW  L+  YV+NG  NEAL+LFRQM +  ++KP  +  SS++PAC  +A  
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATL 360

Query: 351 KHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMKEKDVVSWTVMISGY 410
             G+++HGYVL+  F  N+ + +ALVDMY K G I++A KIF RM   D VSWT +I G+
Sbjct: 361 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 420

Query: 411 SLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEEGDFYFNCITE-----P 470
           +LHG G   V LF EM R   V  +++ + AVL ACS   +V+E   YFN +T+      
Sbjct: 421 ALHGHGHEAVSLFEEMKRQ-GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 480

Query: 471 TMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNSEILRALLDGCRKHHQQKLGKRIIEQL 530
            + H+     LLGRAG+ +EA  F+ K  ++    +   LL  C  H   +L +++ E++
Sbjct: 481 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 540

Query: 531 CDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTIRDMGLRPKKAYSWMEFRNKIHAFGTG 590
             ++  N   YVL+ N YASN  W+ + KLR  +R  GLR K A SW+E +NK H F +G
Sbjct: 541 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 600

Query: 591 DVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRFHDVDEERECALI-GHSELLAISFGLI 650
           D SHP    I   L+ +M++ME++G+  +T    HDVDEE +  L+ GHSE LA++FG+I
Sbjct: 601 DRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII 660

Query: 651 STEAGRTIRIAKNLRVCHSCHESAKFISKKVGREIIVKDPYVFHHFKDGRCSCEDF 665
           +TE G TIR+ KN+R+C  CH + KFISK   REIIV+D   FHHF  G CSC D+
Sbjct: 661 NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714

BLAST of Csor.00g250050.m01 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 393.7 bits (1010), Expect = 3.0e-109
Identity = 215/622 (34.57%), Postives = 339/622 (54.50%), Query Frame = 0

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRH 107
           A ++FD +P  D  +WN ++  +  +G     +   + M    ++P   T+  V+ A   
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248

Query: 108 YGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTML 167
              + +GK++H  A + G  S + + T+L+++Y    S +TAR L D    RN VSW  +
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308

Query: 168 AKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGL 227
              Y+  + P  ++ +F +M++       V++  A+ AC     L+ GR IH ++   GL
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368

Query: 228 EFDVLVSNCLLKMYLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQ 287
           + +V V N L+ MY  C  +  A  +F ++  R ++SW  +I  + +NG   +AL  F Q
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428

Query: 288 MNMDGELKPDPLTISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSG 347
           M     +KPD  T  S++ A   ++   H + IHG V+++  D N+ V  ALVDMY K G
Sbjct: 429 MR-SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 488

Query: 348 CIQSALKIFSRMKEKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVL 407
            I  A  IF  M E+ V +W  MI GY  HG GK  + LF EM +   +  + +T+ +V+
Sbjct: 489 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG-TIKPNGVTFLSVI 548

Query: 408 QACSTASMVEEG--DFYF---NCITEPTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKN 467
            ACS + +VE G   FY    N   E +M H+   V LLGRAGR +EA  F+ +  +   
Sbjct: 549 SACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 608

Query: 468 SEILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKT 527
             +  A+L  C+ H      ++  E+L +L P +   +VLL+N Y +   WE V ++R +
Sbjct: 609 VNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS 668

Query: 528 IRDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFR 587
           +   GLR     S +E +N++H+F +G  +HP S+ IY  L+ L+  ++E G+  +T+  
Sbjct: 669 MLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV 728

Query: 588 FHDVDEERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGRE 647
               ++ +E  L  HSE LAISFGL++T AG TI + KNLRVC  CH + K+IS   GRE
Sbjct: 729 LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 788

Query: 648 IIVKDPYVFHHFKDGRCSCEDF 665
           I+V+D   FHHFK+G CSC D+
Sbjct: 789 IVVRDMQRFHHFKNGACSCGDY 808

BLAST of Csor.00g250050.m01 vs. TAIR 10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 387.9 bits (995), Expect = 1.7e-107
Identity = 225/621 (36.23%), Postives = 335/621 (53.95%), Query Frame = 0

Query: 48  AHQLFDDIPIWDTFAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRH 107
           A  LFD +P  D  +WN +I  +  +G     +  +  M    V PD  TL  VI A   
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 108 YGDLQLGKQLHAQAFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTML 167
            GD +LG+ +HA     G   ++ V  SL ++Y    S   A  L  +   ++ VSWT +
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369

Query: 168 AKLYLMEDKPSFSIDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGL 227
              Y     P  +ID +  M + +   D + +A  + AC     L  G  +H +A    L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429

Query: 228 EFDVLVSNCLLKMYLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQ 287
              V+V+N L+ MY  C  I  A  +F+ +P +++ISWT +I     N    EAL   RQ
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489

Query: 288 MNMDGELKPDPLTISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSG 347
           M M   L+P+ +T+++ L AC RI A   G+EIH +VL+     +  + NAL+DMYV+ G
Sbjct: 490 MKM--TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 549

Query: 348 CIQSALKIFSRMKEKDVVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVL 407
            + +A   F+  K KDV SW ++++GYS  GQG + V LF  M ++ RV  DEIT+ ++L
Sbjct: 550 RMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKS-RVRPDEITFISLL 609

Query: 408 QACSTASMVEEGDFYFNCITE----PTMAHFVLKVALLGRAGRFDEARTFVDKHKLDKNS 467
             CS + MV +G  YF+ + +    P + H+   V LLGRAG   EA  F+ K  +  + 
Sbjct: 610 CGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP 669

Query: 468 EILRALLDGCRKHHQQKLGKRIIEQLCDLEPLNAENYVLLSNWYASNEEWEMVEKLRKTI 527
            +  ALL+ CR HH+  LG+   + + +L+  +   Y+LL N YA   +W  V K+R+ +
Sbjct: 670 AVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMM 729

Query: 528 RDMGLRPKKAYSWMEFRNKIHAFGTGDVSHPRSQAIYWNLQCLMKKMEEDGFKRNTDFRF 587
           ++ GL      SW+E + K+HAF + D  HP+++ I   L+   +KM E G  + ++   
Sbjct: 730 KENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSS 789

Query: 588 HDVDE-ERECALIGHSELLAISFGLISTEAGRTIRIAKNLRVCHSCHESAKFISKKVGRE 647
            D  E  R+    GHSE  AI+FGLI+T  G  I + KNL +C +CH++ KFISK V RE
Sbjct: 790 MDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRRE 849

Query: 648 IIVKDPYVFHHFKDGRCSCED 664
           I V+D   FHHFKDG CSC D
Sbjct: 850 ISVRDAEHFHHFKDGECSCGD 866

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SN391.5e-12436.98Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q9LTV87.0e-11935.94Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q9LW631.7e-11234.45Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
Q3E6Q14.3e-10834.57Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9M9E22.3e-10636.23Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
KAG6597728.10.0100.00Pentatricopeptide repeat-containing protein DOT4, chloroplastic, partial [Cucurb... [more]
KAG7029175.10.099.70Pentatricopeptide repeat-containing protein DOT4, chloroplastic, partial [Cucurb... [more]
XP_023539701.10.099.25pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... [more]
XP_022972268.10.098.80pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... [more]
XP_022932569.10.098.50pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... [more]
Match NameE-valueIdentityDescription
A0A6J1I9E10.098.80pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbit... [more]
A0A6J1EXC60.098.50pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbit... [more]
A0A1S3CPR50.082.41pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucumis ... [more]
A0A6J1E0A40.082.71pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Momordic... [more]
A0A0A0L9N40.078.91DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7228... [more]
Match NameE-valueIdentityDescription
AT4G18750.11.0e-12536.98Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G12770.15.0e-12035.94mitochondrial editing factor 22 [more]
AT3G23330.11.2e-11334.45Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G11290.13.0e-10934.57Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G15510.11.7e-10736.23Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 534..655
e-value: 8.6E-33
score: 112.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 261..308
e-value: 4.3E-7
score: 30.0
coord: 362..410
e-value: 4.3E-8
score: 33.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 62..91
e-value: 0.49
score: 10.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 263..297
e-value: 6.8E-4
score: 17.6
coord: 62..94
e-value: 5.1E-4
score: 18.0
coord: 335..365
e-value: 5.9E-5
score: 21.0
coord: 365..393
e-value: 0.0018
score: 16.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 261..295
score: 9.722731
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 59..93
score: 10.314641
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 332..366
score: 9.788499
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 425..598
e-value: 7.9E-6
score: 27.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 33..173
e-value: 5.4E-12
score: 47.7
coord: 174..317
e-value: 2.1E-22
score: 81.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 318..421
e-value: 1.9E-20
score: 75.0
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 1..658
NoneNo IPR availablePANTHERPTHR24015:SF1853REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..658

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csor.00g250050Csor.00g250050gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g250050.m01.CDS01Csor.00g250050.m01.CDS01CDS


The following single feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g250050.m01.single01Csor.00g250050.m01.single01single


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g250050.m01.start_codon01Csor.00g250050.m01.start_codon01start_codon


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g250050.m01.stop_codon01Csor.00g250050.m01.stop_codon01stop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csor.00g250050.m01Csor.00g250050.m01-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding