Csor.00g128070.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g128070.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	zinc finger CCCH domain-containing protein 31-like
Location	Csor_Chr07: 7189289 .. 7194293 (+)
Sequence length	882
RNA-Seq Expression	Csor.00g128070.m01
Synteny	Csor.00g128070.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATGCGTAAGCGGAGGCCTGAGTCTGCCTTCAATTCTAATGGTACCTTCAAGAAGCATAAGCAAGGTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTCCGGGTTATTATTCTGTTTTTTTGAAGTGGGTGTTCGATGCTCTGCCTCTTTCCTTTGTGTAACTAGTTTGAATCTTCGTCTGGTTGCTTATGAGAGGGAGGAATTGAAGGGAAAATTATGTACTTAGTCAGTGGTTTATTTTATTCAATGTAGAGGGAGTGGAAGGAATTTCAGTTTCCTGATTTAATTCGTTTCTTTTCTGAAGCTAGAAATGTCGCTTTTGCTGTCTTTGTTGTTTTTCTTTGGATTTTTGAGTTAATTCAGAAGAGTTAGTGACCATGTGTTCGAGCCCCCTGATCTGATGGCTGGAATACTCTTTTAATAACTGCAATCTGCTCTTTGAAGATGGTTAGATTTGAATTCAAGTGAAATTGGAAAGGGGTAATTGGAGGGCTTGTAGGACGGTGGCTGTTGGTGGTGTGATTTGGGACCATGTGAGGGGCTTGGTTTCCATTGTCATCCTTACAAAGTGTCCGTAGGGTTCAGTATTGAATTGTATTATTATGGCTAGCTGTAGAGCCCTTTTCTTGATCTCCTGAACCGGCTTGGGATGATCATCAGCCATCCTCTTTTCTGTTTCATCTTGTGCATATTAAACGAACAATCCTTTTCTTTTATAAAAAAAAATCGAAAACAATATCCTTAGTCTAAAGCTACAGGAGTTCACGAAAAAGAAACCAAATGGAATTAATGAAGTATTGCTGGACTTATGTGAGACATGCCCAAGGGAAAAAGACATTTGCAAGCATTTTTTTTTTGAAGTCTGCTGGTTGTATTTAGGTATCCCGAAGAAAACTTTAATTTGGGTAATTGGAAGAAAATATCCTCAATTGTTCCAAAATTAATCTTTTTATGCTTATCTTTTCTGGTGATTAGGTAGTTCTACAATGCATGTTCTTCAATGGGAATTAAGCAACCAATGAAGCCATTTAATATTAGATCATTCTCTCTCTGTCTTTTTTAAATGTTCCTGAATTCTGGAAGAATGCCAGTTTATCTTTCTTTTTGTGCTTTGGAGGATTAGTACCTCTGATTGTGCCCCCATGGAAGTTTTCAAGTCTGAGTTCAACTCAAGGAATTTGGCAATTCTAGTTGACATCTTGATGGGGACTAATTATACTTTAGTTAACTGAACCCTTTTGGACTATTCACAGCCTTTTTAGTTTATAACCTTCAACTCTCTCGATAACATTGTTTTAGAATTCTTTGCTTTAGATACTCGTGAAGGGGTAAGCACAAGTAACTATGTCGAGATTTAGCTGGCCTAAAGTTGAGTAGCTTGACCATGCTGTGGTTCTCCATCACTTCTAATTTAAGCTATGCTGATGTGGTTAATGTAACAGCCTAAATCCACCGCCAGCAGATATTGTCCTCTTTGGGCTTTCCTCTCAAGGTTTTAAAATGCGTCTTCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTCTATTCCACTCTCCAACCGATGTGGGATCTCACAATCCACTCCATTTGGAGCCAGCGTCCTTGCTAGCACACCGCCAGGTGTCTGGTTATGATACCATTTATAACAGCGCAAACCCACTGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTCCAGGATTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAGAGATTTTCCCACCCTTGTAAAGAATGCTTCATTCCCCTCTCCAACCGATGTGGGATCTCACATCAACAACATTCAGGTCCAAAACTGGCTGATCTGTCTCAGTAATGATAACTATTTTATTTAGATTTCCCCTTTTTGGGTGAGAAATGGTAATGACATTAACGTAATTGTAAGTTGCTATCAGCGGTTTGATCTCTCTCCAGTTTTCTCATAATCGACCTTTACTGAATTATCCAGTAGTTTGTTGAGAATGTTGATGATAAACAAAGAATTAGAAAGGGAAACCCTTGCCAAACACCTCTTGATGCAACTATTCTCCTCCTTGGACTAGAATTTAAAATTGCTAATGTAGCCTTGAATCCAATTTCTCCATTAATTGTGAATTTGAAAGCGTCATAAAAAATGTCCAATCAATTGAACTCCTGTAGTTTTATTTTATGTTCTGCTGAAATTCATATTCTCTATTTTGGGCTTTTAAGTTCAGTGATCCTTTATTCTAGAGTTCAACATTCAAGCCTTTTATTATGAAATAGCACGTAGTTTTTAAAGCTCTGGGCTTGTTGTAACTTAGAAATACCTGTTTCCATCCATCAAGGTCGATTGTTAGTTACTTTGTCATTTGGTGACTAGCTCCTCAGCCTTCCGGCATATTTGAGTGGTATACACTTTTTTGGAATATGAACTGAATATCTGTTTGAAGAATTATGACTTAAATAACAATTCCTCAATATCTTGAGTTTATTTACTACGTTTTTCTTTCTTTAAGCAGTGAGTGATGGAAACAATTATTTATTTATATTAATATATCTATGTGCAAGGTACACATTAGATCAAAAGAAAAGTTAAAATTGTTCTGGCAATAGGTTTATTGTATCCTTAGGTCAGTAATCAGGGCTATAATGAAGGCTTGGAGGCTAAAATATTATCCTTCCATTGATGAGATTCGATTCTAGGAAGGATTCTATTTTTAAATTACTTTTTTGGGTCTTGGGATTTCATCACGATTCAACGAGAAACTGTTGAAGTTACCAAATTCATATATTAAGAAGTTACTCTACAGTAACAGAAAGCTACAAACTATTTAGTAATATTTTAGTTGCCTAAATAATTCTAGTGTGAAGATATATTAAAGTATTAGAGTAAAAAATCTTAACAATTTGTAACTGAGAGAGAATAATTAATGTTTTGCAACAGAACTGGAGCCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGGTTCATATCTTACCTACCTAAATAAATATTTGAACTGCATATTATCTCTCCTAATGATTTAAACCTTCTGTAAGAATTTAATTGATCGTGAATTACAAAATAAAGCCGAGTAATTGCGCTTCTGAAAACTGGGAATACAGGTATAAATCATTACTCTAAGCCTTCAACGAAGTAAATAATTGATTTAAAAACTGAACATATTTATGAGTTTAGAAGTTTAGAAGTTTAGAAATTTAAACTTTGCTCAATTGCTACCGAACTCAGAGTCTCTCTCTCTCTCTCTGTTATTTTGCACTGCACGTGAAAAACAATCTCATTCTCATTGGTTAAAACTTAGTTAGTTTGATCCATTTTATGATCTGAGTTCAATTTGGCTACGTTGTATCCTATTGATGTTGAGTCATTCTATGGATCACGTAGATGGCAATTTCTTGTCTTGGTATTTGTTTGTTGGCAATTCATTTCCTTCAACCCTTCGTTTCTCCTCTATAAATTACTGTAACCATGCATCTTTATACTTCTAAAAAGGTGATCAACCACAATTTTATCTTGTCTCAGTAAAATTATTTTCTAATTGTTCGTGACGATATTTTAAGTGCCTAAAGGTTTGAATTCTTTGATGGGTTAGTTCACTTGTTTGGCAGGATAAATTTTCAACAGAATAGAAAAGGGGAGAAAATAGATATTGTATTTTATTGTTTTTATGTTTTGTTACTGTTTGTATGATCATTAGTCATCGTATGAGTATATCTTAATTAAATATGTCCTATCAGTAAATTAACTTAAGAGAAGAAATGAATGAAAATACAAAAAAGAAGATATTTCTTTGAAACATTTTTTAAATGAAAGAGAAGAGAGAGCGGTTTTATATCATTGATTTAGAGAACAATTTCTATAATAGTTTTGTAGAATATTCACCTGAAAGGGCCCTTGGAGGGGGAGATTGATTGGAGAGGGGATTGATATATTTGCAAGTTCGTTCTTGTGGGGCTGCTGTTTTTATAGTTTCCTTCTTTGTTTTGTTTTTTTTTTTTTTTTTCTGGAAAAGAAAGCTAATTTTCAAAGAAACCCCAAATTTCCCTTATTTGTATGCTGTATGTACTGTCTACAGAATAGTCTGTGTTTAGATTTATGATTTTCCGAGGAAGGACTGTGTTTTTTCTTGTTTTGCTTGTGTTTTGCTCGTGTTTTGCTCGTGTTTTGTGTTGTCTTGGTTTGGTTGATCTTATAGGTGTGTTTATCTTCCTGGATTTCAGTACTGCTGGGTGTCCGTTTGGTGAAAGCTGCCATTTCTTGCATCACGTTCCTGGTGGTTATAATGTTGTGGCTCAAATGATGAATCTCCCACCTGTTGGTTCTCAACCGTCCAGAAATATGGCTGCCCCGCCTTCGGTCACCAATGGCGGGTCCTCTGCTTCGTCCCAAGTCAAAACTCGCATGTGCAACAAGTACAACACTGCAGAAGGCTGCAAGTTTGGCGATAAATGCAACTTTGCTCATGGCGAGTGGGAACTTGGGAGGCCTCCATCTCACGATAATCCCCGTGGTATGGGAGGACATATGGTTGGTCGAATGGGTGGCCGAATGGACCTGCCACAACCAGGTCCTGCTGCAAGCTTTGGTGCTTCAGCTACAGCGAAAATCAGTATAGATGCCTCCCTTGCAGGAGCAATCATCGGCAAGGGTGGGATCAACTCGAAACAGATTTGTCGCCAAACGGGTGCCAAACTCTCCATCAGGGACCACGAATCAGACACAAATCTCAGAAACATAGAACTGGAGGGTACTTTCGAGCAAATTAACGAAGCAAGTGCAATGGTGAGAGAGCTTATTATCACAGTATCGATGACAGGACCCGGCAAAGCTCCCGCAATGGGAGGAGGTCCTGCTCCTTCAGGTAGCAACTATAAAACAAAGATGTGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCACACGGGGCGGCTGAGTTACGCAAGTCTGGAGTATGA

mRNA sequence

ATGGACATGCGTAAGCGGAGGCCTGAGTCTGCCTTCAATTCTAATGGTACCTTCAAGAAGCATAAGCAAGAACTGGAGCCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGTACTGCTGGGTGTCCGTTTGGTGAAAGCTGCCATTTCTTGCATCACGTTCCTGGTGGTTATAATGTTGTGGCTCAAATGATGAATCTCCCACCTGTTGGTTCTCAACCGTCCAGAAATATGGCTGCCCCGCCTTCGGTCACCAATGGCGGGTCCTCTGCTTCGTCCCAAGTCAAAACTCGCATGTGCAACAAGTACAACACTGCAGAAGGCTGCAAGTTTGGCGATAAATGCAACTTTGCTCATGGCGAGTGGGAACTTGGGAGGCCTCCATCTCACGATAATCCCCGTGGTATGGGAGGACATATGGTTGGTCGAATGGGTGGCCGAATGGACCTGCCACAACCAGGTCCTGCTGCAAGCTTTGGTGCTTCAGCTACAGCGAAAATCAGTATAGATGCCTCCCTTGCAGGAGCAATCATCGGCAAGGGTGGGATCAACTCGAAACAGATTTGTCGCCAAACGGGTGCCAAACTCTCCATCAGGGACCACGAATCAGACACAAATCTCAGAAACATAGAACTGGAGGGTACTTTCGAGCAAATTAACGAAGCAAGTGCAATGGTGAGAGAGCTTATTATCACAGTATCGATGACAGGACCCGGCAAAGCTCCCGCAATGGGAGGAGGTCCTGCTCCTTCAGGTAGCAACTATAAAACAAAGATGTGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCACACGGGGCGGCTGAGTTACGCAAGTCTGGAGTATGA

Coding sequence (CDS)

ATGGACATGCGTAAGCGGAGGCCTGAGTCTGCCTTCAATTCTAATGGTACCTTCAAGAAGCATAAGCAAGAACTGGAGCCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGTACTGCTGGGTGTCCGTTTGGTGAAAGCTGCCATTTCTTGCATCACGTTCCTGGTGGTTATAATGTTGTGGCTCAAATGATGAATCTCCCACCTGTTGGTTCTCAACCGTCCAGAAATATGGCTGCCCCGCCTTCGGTCACCAATGGCGGGTCCTCTGCTTCGTCCCAAGTCAAAACTCGCATGTGCAACAAGTACAACACTGCAGAAGGCTGCAAGTTTGGCGATAAATGCAACTTTGCTCATGGCGAGTGGGAACTTGGGAGGCCTCCATCTCACGATAATCCCCGTGGTATGGGAGGACATATGGTTGGTCGAATGGGTGGCCGAATGGACCTGCCACAACCAGGTCCTGCTGCAAGCTTTGGTGCTTCAGCTACAGCGAAAATCAGTATAGATGCCTCCCTTGCAGGAGCAATCATCGGCAAGGGTGGGATCAACTCGAAACAGATTTGTCGCCAAACGGGTGCCAAACTCTCCATCAGGGACCACGAATCAGACACAAATCTCAGAAACATAGAACTGGAGGGTACTTTCGAGCAAATTAACGAAGCAAGTGCAATGGTGAGAGAGCTTATTATCACAGTATCGATGACAGGACCCGGCAAAGCTCCCGCAATGGGAGGAGGTCCTGCTCCTTCAGGTAGCAACTATAAAACAAAGATGTGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCACACGGGGCGGCTGAGTTACGCAAGTCTGGAGTATGA

Protein sequence

MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVPGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSMTGPGKAPAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV

Homology

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BLAST of Csor.00g128070.m01 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 8.2e-88
Identity = 186/312 (59.62%), Postives = 213/312 (68.27%), Query Frame = 0


Query: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLST-VGSKSKPCTKFFSTAGCPFGESCHFLHHV 60
           M++  R+      +NG   K  +E E   T VGSKSKPCTKFFST+GCPFGE CHFLHH 
Sbjct: 1   MEVGGRKRGKPDGANGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHF 60

Query: 61  PGGYNVVAQMMNL------PPVGSQPSRNMA--APPSVTNGGSSASSQVKTRMCNKYNTA 120
           PGGY  VA+M NL      PP G  P  N     PP+ T         VKTR+CNKYNTA
Sbjct: 61  PGGYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDGPPTPT---------VKTRLCNKYNTA 120

Query: 121 EGCKFGDKCNFAHGEWELGRPPSHDN--PRGMGGHMVGRMGGRMDLPQPGPA----ASFG 180
           EGCK+GDKC+FAHGE ELG+P   D+  P  MG    G        P P PA    ASFG
Sbjct: 121 EGCKWGDKCHFAHGERELGKPMLMDSSMPPPMGPRPTGHFA---PPPMPSPAMSTPASFG 180

Query: 181 ASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQIN 240
           ASATAKIS+DASLAG IIG+GG+N+KQI R TGAKL+IRDHESDTNL+NIELEGTF+QI 
Sbjct: 181 ASATAKISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIK 240

Query: 241 EASAMVRELIITVSMTGP--GKAPA----MGGGPAPSGSNYKTKMCDNFAKGSCTFGERC 292
            ASAMVRELI+++    P  GK P      GGGP   GSN+KTK+C+NF KGSCTFG+RC
Sbjct: 241 NASAMVRELIVSIGGGAPPQGKKPVGGSHRGGGP---GSNFKTKLCENFTKGSCTFGDRC 297

[Close]

BLAST of Csor.00g128070.m01 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.9e-86
Identity = 177/301 (58.80%), Postives = 206/301 (68.44%), Query Frame = 0


Query: 4   RKRRPESAFNSNGTFKKHKQELEPLST-VGSKSKPCTKFFSTAGCPFGESCHFLHHVPGG 63
           ++ RP++A N      K  +E E   T + SK KPCTKFFST GCPFGE CHF H VPGG
Sbjct: 9   KRSRPDTA-NGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPGG 68

Query: 64  YNVVAQMMNL-PPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKCN 123
           Y  VA+ +NL  P    P+R  A       G S  +S  KTRMC KYNTAEGCKFGDKC+
Sbjct: 69  YQAVAKTLNLGNPAVPAPAR--APMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKCH 128

Query: 124 FAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPG----PAASFGASATAKISIDAS 183
           FAHGE ELG+P    +   M   M GR GGR + P P     PA +FGASATAKIS+DAS
Sbjct: 129 FAHGERELGKPAYMSHESAMAPPMGGRYGGRPEPPPPAAMGPPAGNFGASATAKISVDAS 188

Query: 184 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIIT 243
           LAG IIGKGG+N+KQICR TG KLSIRDHESD+NL+NIELEG F+QI +AS MV ELI T
Sbjct: 189 LAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGELIAT 248

Query: 244 VSMTGPGKAPA-MGGGPAPSG-------SNYKTKMCDNFAKGSCTFGERCHFAHGAAELR 291
           +S + P K PA    G AP+G       SNYKTK+C+NF KG+CTFG+RCHFAHG  E R
Sbjct: 249 ISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFVKGTCTFGDRCHFAHGENEQR 306

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BLAST of Csor.00g128070.m01 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.1e-79
Identity = 166/284 (58.45%), Postives = 195/284 (68.66%), Query Frame = 0


Query: 14  SNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVPGGYNVVAQMMNL- 73
           +NG  K+ +        VGSK KPCTKFFST+GCPFG SCHFLH+ PGGY   A+M +  
Sbjct: 14  TNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHG 73

Query: 74  -PPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGR 133
              V + P R M   P   NG    +S VKTRMCNKYNTAEGCK+G KC+FAHGE ELG+
Sbjct: 74  GTAVAAPPGR-MPLGPGAPNG--PPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGK 133

Query: 134 PPSHDNPRGMGGHMVGRMGGRMDLPQPG----PAASFGASATAKISIDASLAGAIIGKGG 193
           P   DN      H +G M      P PG    P ++FGASATAKIS+DASLAG IIGKGG
Sbjct: 134 PMLLDNSM---PHPMGSMPFEAP-PMPGPDIVPPSTFGASATAKISVDASLAGGIIGKGG 193

Query: 194 INSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSMTG-PGKA 253
            N+K I R TGAKL+IRD+ES+ NL+NIELEGTF+QI  ASAMV ELI+ +S    P K 
Sbjct: 194 TNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRISGNAPPAKN 253

Query: 254 PAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRK 291
           P  G      GSN+KTK+C+NF KGSCTFG+RCHFAHG +ELRK
Sbjct: 254 PGRGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRK 290

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BLAST of Csor.00g128070.m01 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.3e-71
Identity = 165/300 (55.00%), Postives = 191/300 (63.67%), Query Frame = 0


Query: 1   MDMRKR-RPESA--FNSNGTFKKHKQELEPLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKR RPE+A   NSNG FK+ KQE+E +ST +GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HHVPGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKF 120
           H+VPGGYN  AQM NL P  SQ SRNM                                 
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNM--------------------------------- 120

Query: 121 GDKCNFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDA 180
                                 +G GG   GR  GR D P  GP + FGAS T+KIS+DA
Sbjct: 121 ----------------------QGSGG-PGGRFSGRGD-PGSGPVSIFGAS-TSKISVDA 180

Query: 181 SLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELII 240
           SLAGAIIGKGGI+SKQICR+TGAKLSI+DHE D NL+ IELEGTFEQIN AS MVRELI 
Sbjct: 181 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELI- 239

Query: 241 TVSMTGPGKAPAMGGGPAPS---GSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 294
                G  K P   GGP      GSNYKTK+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 241 --GRLGSVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]

BLAST of Csor.00g128070.m01 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 7.2e-68
Identity = 159/306 (51.96%), Postives = 190/306 (62.09%), Query Frame = 0


Query: 1   MDMRKR-RPES-AFNSN-GTFKKHKQELEPLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKR RPE+ +FNSN G +KK KQE+E  ST +GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HHVPGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKF 120
           H+VPGGYN V+QM N+ P   Q SRNM                                 
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM--------------------------------- 120

Query: 121 GDKCNFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDA 180
                                    G    GR  GR +   PG  ++FG SATA+ S+DA
Sbjct: 121 ------------------------QGSGNGGRFSGRGE-SGPGHVSNFGDSATARFSVDA 180

Query: 181 SLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELII 240
           SLAGAIIGKGG++SKQICRQTG KLSI+DHE D NL+NI LEGT EQI+EASAMV++LI 
Sbjct: 181 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 240

Query: 241 TVSMTG---PGKAPAMGGG------PAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAE 294
            ++      PG     GGG      P P GSN+KTK+C+ F+KG+CTFG+RCHFAHG AE
Sbjct: 241 RLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKICERFSKGNCTFGDRCHFAHGEAE 247

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BLAST of Csor.00g128070.m01 vs. NCBI nr
Match: KAG6595585.1 (Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 597 bits (1538), Expect = 2.96e-215
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60
           MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP
Sbjct: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60

Query: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKC 120
           GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKC
Sbjct: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180
           NFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG
Sbjct: 121 NFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180

Query: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240
           AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM
Sbjct: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240

Query: 241 TGPGKAPAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 293
           TGPGKAPAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 TGPGKAPAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 293

[Close]

BLAST of Csor.00g128070.m01 vs. NCBI nr
Match: XP_022925262.1 (zinc finger CCCH domain-containing protein 31-like [Cucurbita moschata] >KAG7027565.1 Zinc finger CCCH domain-containing protein 14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 586 bits (1510), Expect = 5.70e-211
Identity = 290/294 (98.64%), Postives = 290/294 (98.64%), Query Frame = 0


Query: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60
           MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP
Sbjct: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60

Query: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKC 120
           GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSA SQVKTRMCNKYNTAEGCKFGDKC
Sbjct: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180
           NFAHGEWELGRPPSHDNPR MGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG
Sbjct: 121 NFAHGEWELGRPPSHDNPRAMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180

Query: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240
           AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM
Sbjct: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240

Query: 241 TGPGKAP-AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 293
            GPGKAP AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 AGPGKAPGAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 294

[Close]

BLAST of Csor.00g128070.m01 vs. NCBI nr
Match: XP_023517365.1 (zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 584 bits (1506), Expect = 2.32e-210
Identity = 289/294 (98.30%), Postives = 290/294 (98.64%), Query Frame = 0


Query: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60
           MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP
Sbjct: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60

Query: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKC 120
           GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSA SQVKTRMCNK+NTAEGCKFGDKC
Sbjct: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180
           NFAHGEWELGRPPSHDNPR MGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG
Sbjct: 121 NFAHGEWELGRPPSHDNPRAMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180

Query: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240
           AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM
Sbjct: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240

Query: 241 TGPGKAP-AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 293
            GPGKAP AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 AGPGKAPGAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 294

[Close]

BLAST of Csor.00g128070.m01 vs. NCBI nr
Match: XP_022966408.1 (zinc finger CCCH domain-containing protein 31-like [Cucurbita maxima])

HSP 1 Score: 578 bits (1489), Expect = 9.07e-208
Identity = 286/294 (97.28%), Postives = 286/294 (97.28%), Query Frame = 0


Query: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60
           MDMRKRRPE AFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP
Sbjct: 1   MDMRKRRPEPAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60

Query: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKC 120
           GGYNVVAQMMNLPPVGS PSRNMAAPP VTNGGSSA SQVKTRMCNKYNTAEGCKFGDKC
Sbjct: 61  GGYNVVAQMMNLPPVGSHPSRNMAAPPLVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180
           NFAHGEWELGRPPSHDNP  MGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG
Sbjct: 121 NFAHGEWELGRPPSHDNPHSMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180

Query: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240
           AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM
Sbjct: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240

Query: 241 TGPGKAP-AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 293
            GPGKAP AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 AGPGKAPGAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 294

[Close]

BLAST of Csor.00g128070.m01 vs. NCBI nr
Match: XP_008442098.1 (PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo])

HSP 1 Score: 542 bits (1397), Expect = 1.38e-193
Identity = 276/304 (90.79%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 1   MDMRKR-RPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHV 60
           MDMRKR RPE+AFNSNG+FKKHKQELE LSTVGSKSKPCTKFFSTAGCPFGESCHFLH+V
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDK 120
           PGGYNVVAQMMNL PVG+QPSRN+AAPPSVTNGGSSA SQVKTRMCNK+NTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRP--PSHDNPRGMGG-------HMVGRMGGRMDLPQPGPAASFGASATA 180
           CNFAHGEWELGRP  PSHDNPR MGG       HMVGRMGGRMDLP PGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESD NLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMTGPGKAPA-MGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELR 293
           VRELIITVSM GPGKA   MGGGPAP+GSNYKTK+CDNFAKGSCTFGERCHFAHGAAELR
Sbjct: 241 VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 300

[Close]

BLAST of Csor.00g128070.m01 vs. ExPASy TrEMBL
Match: A0A6J1EBA5 (zinc finger CCCH domain-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111432553 PE=4 SV=1)

HSP 1 Score: 586 bits (1510), Expect = 2.76e-211
Identity = 290/294 (98.64%), Postives = 290/294 (98.64%), Query Frame = 0


Query: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60
           MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP
Sbjct: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60

Query: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKC 120
           GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSA SQVKTRMCNKYNTAEGCKFGDKC
Sbjct: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180
           NFAHGEWELGRPPSHDNPR MGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG
Sbjct: 121 NFAHGEWELGRPPSHDNPRAMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180

Query: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240
           AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM
Sbjct: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240

Query: 241 TGPGKAP-AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 293
            GPGKAP AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 AGPGKAPGAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 294

[Close]

BLAST of Csor.00g128070.m01 vs. ExPASy TrEMBL
Match: A0A6J1HS15 (zinc finger CCCH domain-containing protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111466068 PE=4 SV=1)

HSP 1 Score: 578 bits (1489), Expect = 4.39e-208
Identity = 286/294 (97.28%), Postives = 286/294 (97.28%), Query Frame = 0


Query: 1   MDMRKRRPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60
           MDMRKRRPE AFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP
Sbjct: 1   MDMRKRRPEPAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHVP 60

Query: 61  GGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKC 120
           GGYNVVAQMMNLPPVGS PSRNMAAPP VTNGGSSA SQVKTRMCNKYNTAEGCKFGDKC
Sbjct: 61  GGYNVVAQMMNLPPVGSHPSRNMAAPPLVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180
           NFAHGEWELGRPPSHDNP  MGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG
Sbjct: 121 NFAHGEWELGRPPSHDNPHSMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAG 180

Query: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240
           AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM
Sbjct: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSM 240

Query: 241 TGPGKAP-AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 293
            GPGKAP AMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 AGPGKAPGAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 294

[Close]

BLAST of Csor.00g128070.m01 vs. ExPASy TrEMBL
Match: A0A1S3B4W9 (zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LOC103486060 PE=4 SV=1)

HSP 1 Score: 542 bits (1397), Expect = 6.70e-194
Identity = 276/304 (90.79%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 1   MDMRKR-RPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHV 60
           MDMRKR RPE+AFNSNG+FKKHKQELE LSTVGSKSKPCTKFFSTAGCPFGESCHFLH+V
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDK 120
           PGGYNVVAQMMNL PVG+QPSRN+AAPPSVTNGGSSA SQVKTRMCNK+NTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRP--PSHDNPRGMGG-------HMVGRMGGRMDLPQPGPAASFGASATA 180
           CNFAHGEWELGRP  PSHDNPR MGG       HMVGRMGGRMDLP PGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESD NLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMTGPGKAPA-MGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELR 293
           VRELIITVSM GPGKA   MGGGPAP+GSNYKTK+CDNFAKGSCTFGERCHFAHGAAELR
Sbjct: 241 VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 300

[Close]

BLAST of Csor.00g128070.m01 vs. ExPASy TrEMBL
Match: A0A0A0KZ79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1)

HSP 1 Score: 541 bits (1395), Expect = 1.40e-193
Identity = 276/305 (90.49%), Postives = 283/305 (92.79%), Query Frame = 0


Query: 1   MDMRKR-RPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHV 60
           MDMRKR RPE+AFNSNG+FKKHKQELE LSTVGSKSKPCTKFFSTAGCPFGESCHFLH+V
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDK 120
           PGGYNVVAQMMNL PVG+QPSRN+AAPPSVTNGG SA SQVKTRMCNKYNTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRP--PSHDNPRGMGG--------HMVGRMGGRMDLPQPGPAASFGASAT 180
           CNFAHGEWELGRP  PSHDNPR MGG        HMVGRMGGRMDLP PGPAASFGASAT
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180

Query: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASA 240
           AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESD NLRNIELEGTFEQINEASA
Sbjct: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240

Query: 241 MVRELIITVSMTGPGKAPA-MGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAEL 293
           MVRELIITVSM GPGKA   MGGGPAP+GSNYKTK+CDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

[Close]

BLAST of Csor.00g128070.m01 vs. ExPASy TrEMBL
Match: A0A6J1ESD4 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111435541 PE=4 SV=1)

HSP 1 Score: 539 bits (1388), Expect = 1.22e-192
Identity = 272/298 (91.28%), Postives = 281/298 (94.30%), Query Frame = 0


Query: 1   MDMRKR-RPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHV 60
           MDMRKR RPE+AFNSNG+FKKHKQELE LSTVG KSKPCTKFFSTAGCPFGESCHFLH+V
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDK 120
           PGGYN VAQMMNL PVGSQPSRNMAAPP V+NGGSSA SQ+KTRMCNK+N+AEGCKFGDK
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120

Query: 121 CNFAHGEWELGRP--PSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDAS 180
           CNFAHGEWELGRP  PSHDNPRGMGGHMVGRMGGRMDLP PGPAASFGASATAKISIDAS
Sbjct: 121 CNFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180

Query: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIIT 240
           LAGAIIGKGGINSKQICRQTGAKLSIRDHESD NLRNIELEGTFEQINEASAMVRELIIT
Sbjct: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIIT 240

Query: 241 VSMTGPGKAPAM--GGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 293
           VSM+GPGK      GGGPAPSGSNYKTK+CDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297

[Close]

BLAST of Csor.00g128070.m01 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 269.2 bits (687), Expect = 3.8e-72
Identity = 165/300 (55.00%), Postives = 191/300 (63.67%), Query Frame = 0


Query: 1   MDMRKR-RPESA--FNSNGTFKKHKQELEPLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKR RPE+A   NSNG FK+ KQE+E +ST +GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HHVPGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKF 120
           H+VPGGYN  AQM NL P  SQ SRNM                                 
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNM--------------------------------- 120

Query: 121 GDKCNFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDA 180
                                 +G GG   GR  GR D P  GP + FGAS T+KIS+DA
Sbjct: 121 ----------------------QGSGG-PGGRFSGRGD-PGSGPVSIFGAS-TSKISVDA 180

Query: 181 SLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELII 240
           SLAGAIIGKGGI+SKQICR+TGAKLSI+DHE D NL+ IELEGTFEQIN AS MVRELI 
Sbjct: 181 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELI- 239

Query: 241 TVSMTGPGKAPAMGGGPAPS---GSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 294
                G  K P   GGP      GSNYKTK+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 241 --GRLGSVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]

BLAST of Csor.00g128070.m01 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 258.8 bits (660), Expect = 5.1e-69
Identity = 159/306 (51.96%), Postives = 190/306 (62.09%), Query Frame = 0


Query: 1   MDMRKR-RPES-AFNSN-GTFKKHKQELEPLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKR RPE+ +FNSN G +KK KQE+E  ST +GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HHVPGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKF 120
           H+VPGGYN V+QM N+ P   Q SRNM                                 
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM--------------------------------- 120

Query: 121 GDKCNFAHGEWELGRPPSHDNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDA 180
                                    G    GR  GR +   PG  ++FG SATA+ S+DA
Sbjct: 121 ------------------------QGSGNGGRFSGRGE-SGPGHVSNFGDSATARFSVDA 180

Query: 181 SLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELII 240
           SLAGAIIGKGG++SKQICRQTG KLSI+DHE D NL+NI LEGT EQI+EASAMV++LI 
Sbjct: 181 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 240

Query: 241 TVSMTG---PGKAPAMGGG------PAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAE 294
            ++      PG     GGG      P P GSN+KTK+C+ F+KG+CTFG+RCHFAHG AE
Sbjct: 241 RLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKICERFSKGNCTFGDRCHFAHGEAE 247

[Close]

BLAST of Csor.00g128070.m01 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 62.4 bits (150), Expect = 7.0e-10
Identity = 41/120 (34.17%), Postives = 54/120 (45.00%), Query Frame = 0


Query: 34  KSKPCTKFFSTAGCPFGESCHFLHHVPGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGG 93
           K + C KF++  GCP+GESC FLH      N  +  ++L P G        +      GG
Sbjct: 174 KGRHCKKFYTEEGCPYGESCTFLHD-EASRNRESVAISLGPGGYGSGGGGGSGGGSVGGG 233

Query: 94  SSASSQV----------------------KTRMCNKYNTAEGCKFGDKCNFAHGEWELGR 132
            S+S+ V                      KTR+CNK+     C FG KC+FAHG  EL R
Sbjct: 234 GSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292

[Close]

BLAST of Csor.00g128070.m01 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.8e-09
Identity = 65/221 (29.41%), Postives = 87/221 (39.37%), Query Frame = 0


Query: 79  PSRNMAAPPSVTNGGSSASSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPPSH--- 138
           PS N   PP V  G  +A+   KTRMC K+  A  C+ G+ CNFAHG  +L +PPS+   
Sbjct: 89  PSLN---PPPVNKG--TANIFYKTRMCAKFR-AGTCRNGELCNFAHGIEDLRQPPSNWQE 148

Query: 139 ---DNPRGMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDASLAGAIIGKGGINSKQ 198
                P G             + P   P  +       KI +   L              
Sbjct: 149 IVGPPPAGQDRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGD 208

Query: 199 ICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIITVSMTGPGKAPA-MGG 258
            C      LS +  E    LR   +        +  +     +I V+  G    PA M  
Sbjct: 209 RCNFIHEDLS-KFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNN 268

Query: 259 GPAPSGSNYKTKMCDNF-AKGSCTFGERCHFAHGAAELRKS 292
           G       +KT++C  F   G C FG++CHFAHG AEL  S
Sbjct: 269 GGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNS 302

[Close]

BLAST of Csor.00g128070.m01 vs. TAIR 10
Match: AT2G25970.1 (KH domain-containing protein )

HSP 1 Score: 44.3 bits (103), Expect = 2.0e-04
Identity = 36/108 (33.33%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 148 RMGGRMDLPQPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI-RDH 207
           +M G +    P    SF    T KI I     G IIGKGG   K +  Q+GAK+ + RD 
Sbjct: 115 QMSGTVPSSIPVSYGSF-QGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDM 174

Query: 208 ESDTN--LRNIELEGTFEQINEASAMVRELIITVSMTGPGKAPAMGGG 253
           ++D N   R ++L GT +QI++A  ++ +++        G     GGG
Sbjct: 175 DADPNCATRTVDLTGTPDQISKAEQLITDVL---QEAEAGNTAGSGGG 218

The following BLAST results are available for this feature:

BLAST of Csor.00g128070.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7F8R0	8.2e-88	59.62	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q7XPK1	5.9e-86	58.80	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	3.1e-79	58.45	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FG30	5.3e-71	55.00	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9C7C3	7.2e-68	51.96	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Csor.00g128070.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595585.1	2.96e-215	100.00	Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma s...	[more]
XP_022925262.1	5.70e-211	98.64	zinc finger CCCH domain-containing protein 31-like [Cucurbita moschata] >KAG7027...	[more]
XP_023517365.1	2.32e-210	98.30	zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo]	[more]
XP_022966408.1	9.07e-208	97.28	zinc finger CCCH domain-containing protein 31-like [Cucurbita maxima]	[more]
XP_008442098.1	1.38e-193	90.79	PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo]	[more]

BLAST of Csor.00g128070.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBA5	2.76e-211	98.64	zinc finger CCCH domain-containing protein 31-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1HS15	4.39e-208	97.28	zinc finger CCCH domain-containing protein 31-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A1S3B4W9	6.70e-194	90.79	zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KZ79	1.40e-193	90.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1	[more]
A0A6J1ESD4	1.22e-192	91.28	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Csor.00g128070.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06770.1	3.8e-72	55.00	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G12130.1	5.1e-69	51.96	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT1G32360.1	7.0e-10	34.17	Zinc finger (CCCH-type) family protein	[more]
AT3G19360.1	7.8e-09	29.41	Zinc finger (CCCH-type) family protein	[more]
AT2G25970.1	2.0e-04	33.33	KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 99..126 e-value: 0.041 score: 23.0 coord: 259..285 e-value: 1.4E-6 score: 37.8 coord: 32..59 e-value: 0.37 score: 19.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 101..126 e-value: 2.7E-5 score: 23.9 coord: 34..58 e-value: 3.4E-5 score: 23.6 coord: 260..284 e-value: 9.0E-8 score: 31.8
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 259..286 score: 16.361071
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 99..127 score: 13.619454
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 32..60 score: 13.009163
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 166..236 e-value: 1.0E-12 score: 58.2
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 163..258 e-value: 5.4E-16 score: 60.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 156..237
None	No IPR available	GENE3D	4.10.1000.10		coord: 259..291 e-value: 4.5E-14 score: 53.5 coord: 93..131 e-value: 1.7E-11 score: 45.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR10288:SF273	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 9..292
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 9..292
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 167..231 score: 14.948431
None	No IPR available	CDD	cd00105	KH-I	coord: 169..231 e-value: 7.6579E-16 score: 68.7407
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 170..233 e-value: 6.0E-12 score: 45.2
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 99..130
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 32..59
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 258..289

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g128070	Csor.00g128070	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g128070.m01.CDS01	Csor.00g128070.m01.CDS01	CDS
Csor.00g128070.m01.CDS02	Csor.00g128070.m01.CDS02	CDS
Csor.00g128070.m01.CDS03	Csor.00g128070.m01.CDS03	CDS

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g128070.m01.start_codon01	Csor.00g128070.m01.start_codon01	start_codon

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g128070.m01.initial01	Csor.00g128070.m01.initial01	initial

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g128070.m01.intron01	Csor.00g128070.m01.intron01	intron
Csor.00g128070.m01.intron02	Csor.00g128070.m01.intron02	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g128070.m01.internal01	Csor.00g128070.m01.internal01	internal

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g128070.m01.terminal01	Csor.00g128070.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g128070.m01.stop_codon01	Csor.00g128070.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g128070.m01	Csor.00g128070.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003729	mRNA binding