Csor.00g120050.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCGTGATTTGGCGCTCGTGTTCGTGTTCTTTGTTCTTAATCTCGCCTCTCGTGGATCCAATGCTTCTTTCTCTGACCGTATTTGGAATCTTCATCTCCGGTTCGCGCTTTCGAAGGATTCTCCTCAGGTTTGTTTGATTTTGAATTTCGATCTTCTTCTTGTTTATGCAACTTTTGGATTGCGATTGACTTCTAAATTTGTATTTCGCCTTTTCGATTCTTCAGAGTATAGCTCCGGCTCCGGCTCCTGGCCCTATCTCTGTTTCTCCAACTCCTGCGATTCCGCCATTTCCAAGCTCAACCGATGGATCTTCTATGAAGAAGTGCAACCCGTCGTACAACACTTGTCACGACCTTGAGAACATGACTGCCTGTCTTCTATTCGCAGAAAAAGGTAATTCCGTTTTTCCCCAATATCATATCATGAGATGATTTTCCCCCAATAAATTGCGAAAAGATTGTTTTCTCACAGCAACGATGGAACAATATCTTCTGATCCAGAATGCTGGAGGGACTTCACTGAAAGTGAATGTTATAATTTCCGATACTAAATTCAAGGAGATACAAGTTCCTGAGCACCAATCTAGAAAGGTACTCTTTGTTAATCTTTGCTGGATCATCACGAGGATAGCTATTTCAAGTTCCGTATTCTGTTTCAGGTTAATATTTCAGATGTTCTAGGAAATTCAAAGATTGTATTAGATGCTGGGAGTGGGAAGTGTGAGATTCAGTTAGGATCACTAATGAAAAGTGGCACCACTTTTGAGCAAATCTCTTCGTATGTAACCCATTTAAACCTCGTATCCGGATCATATATACTGCTTTCAATTGTTTTGATCATTGGAGGTGTGTGGGCATGCTGCAAGATAGGAACCAAGGAACGCCATGCTGATGAAGTTCCCTATCAGGAGCTTGAATTGGCAGAGCAGGATTCTTCTCCAACCAACGATTTGGAAGCATCAGAAGGTTGGGATCAAGGCTGGGACGACGACTGGGATGATGAGCCGAAGCCTGCAAATAAATCAAATTCTCAGACAAAGGCAAGCGGATCATCAAACGGTATTAGCTCTAGAACTTCTGGGAAATGATATGGGACGATTTTAGGTACAGGATAATGAATGATGTTGAATATGTCTGCTCATCACAATAGATGGGCTTTTTTTCTTCTTTGAAGAACAATAGGGGTCTCAGTTTTGCTCTTAGTAGAGGTATGTCAACATTTCAATTCAAATTTGAACTATGTAGATACCTATAACTTTTAAATCTTATAGTTTCATTAGTCTCACAAATTTCCAAGGTATCATTTTCATTTTATATTGAATTTATCCTCTATATTTGTTAGTGTGGCTCCTCCTTTTCAACTAATAATAGTAATTGTATAAAGAATTTTCTTAAAATGATACAGAAGTTTTATCTTTTATTGTTGCTTTTTATTCTATCGTGGTGTGTGAACGAAGATTCTGGGCTTCTGAGGGGTGGATCGTGAGACCGTTGGGGAGAGAACGAAACCATCTTTGATTAATGAGCATATTATGACCACCATCTTTGTACTCTTAAATAAGATATCATATTAACAACATTATTTTGAGAATATTTTTTTTTTCCTTTCTAGAGTACAATATACAAAGATCTAACATGGTGCCTTCGGTATAACAAGAGTATTTTATAAGGATGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTGAAAAACAGGTTGATTTATGGGTTGCCTAAAAATTTATCAGGTTGAATTGAAATTAACAGATATAAATTATATAATTATATGTACATCTATCTATTTAATTTCTATAATTATTTATTCTCTAACCTTTCTTAACCATAATTTTCAACTATTTTAAAGATAATTTTTTAAAACAATATATTAAAACTGAATTATAAATTTTATTTAAATATTTAAAATAAATAAATAGCTATTTTAAAAAATAATATTTTACTTTTATTTTAAAAATTATTGATTAGGTTGGATTTGTTTATTATTTAATCATGAAACTTTTAAAACACACAAAATTTGTTGAGTCAAAAGAGTGAAACCGAATGAAATACCCAAAACCCCCTTAGGATTCTCACTCTGCCTATGGGTAAATAGGTAAATCAGAGCTATTATGACCTGTTCTTCGCTCTTAAGATCTTACGGTAAATCTGTATGCCACGTTTTTCGTCTCTGGCCGTCCGATTTAATTCCTATCTTGCTCCGTCTACCCTTATACCTCATCTCCTAGGCCTCGTTTCAATTTCTTTACTCTCTCCGCCGTCTCTCTGCCGAAAAAGGGATTTTTCCAAAGCCGATCCCGATTTATTTTCCGTTGTTGTTTTTGATTTCTTCTATTAAGTGTGGTATTGCGAGCGTTTTTGCAGTCGGCGATTCAGATCTCTGTAAGTGTTACTTATTCGAAATCGATCAATTGCCATCGGCAATGCGTTTTCTTTTGATTTGATGGTATCTTTTTGCTTGTTCATTGAGAAAAGAACTCGAATTCGATATTGATTGCAATACCCCCTGCATGCGTCGTTTTTCTCATTCCGTTGTGTTGTTGGGATCTTATCGTTCTTGGAATGTGGTCGTTAGGTTCCATCAAAATTCTTCGTTGGCGGTGATTCGATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACGATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTTGTTTCCACTCAGGTTTTCTTCTCACTATACTTGAAATTTGTTTCTTTTGTTGATGGTGGATGGATACTCAAAATGTAAACAGCCGGTTAGTTTATAAAATCGTACATGGTTTTTGATATGGACTAAGCCTAAATTCCTTGTTTGATCGTCAACGAATTGGTTTCATAACGAGCTGCGTTACTCTGTTTCATCTGTTATTTACGTAGTTCATAACGAAATCAACTCATTGCAAGTTTTTGGAACAATAATACTGGAGTCATAGCTCTTGTTATATATTGTTTTCTGGATTTTTTTTTTCAATCCATTTTCCTTTGTAATTGAGGTCCATTTTCATGCGTTGCTCAAGATTCTATATCTTGCCTTCCATAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAAAAGAATGGAAACGGCAACAGTAAAGAACCATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATTTTCCAGATCGGCGAGCGCGGTCTCGGAGAAGAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATAGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGCGCCGCTGGACCTCCAAAGCTTACTGCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGCGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTCGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCAAAGAACCCAGATTTTCGGAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACCCGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGTTGA ATGAATCGTGATTTGGCGCTCGTGTTCGTGTTCTTTGTTCTTAATCTCGCCTCTCGTGGATCCAATGCTTCTTTCTCTGACCGTATTTGGAATCTTCATCTCCGGTTCGCGCTTTCGAAGGATTCTCCTCAGAGTATAGCTCCGGCTCCGGCTCCTGGCCCTATCTCTGTTTCTCCAACTCCTGCGATTCCGCCATTTCCAAGCTCAACCGATGGATCTTCTATGAAGAAGTGCAACCCGTCGTACAACACTTGTCACGACCTTGAGAACATGACTGCCTGTCTTCTATTCGCAGAAAAAGCAACGATGGAACAATATCTTCTGATCCAGAATGCTGGAGGGACTTCACTGAAAGTGAATGTTATAATTTCCGATACTAAATTCAAGGAGATACAAGTTCCTGAGCACCAATCTAGAAAGGTTAATATTTCAGATGTTCTAGGAAATTCAAAGATTGTATTAGATGCTGGGAGTGGGAAGTGTGAGATTCAGTTAGGATCACTAATGAAAAGTGGCACCACTTTTGAGCAAATCTCTTCGTATGTAACCCATTTAAACCTCGTATCCGGATCATATATACTGCTTTCAATTGTTTTGATCATTGGAGGTGTGTGGGCATGCTGCAAGATAGGAACCAAGGAACGCCATGCTGATGAAGTTCCCTATCAGGAGCTTGAATTGGCAGAGCAGGATTCTTCTCCAACCAACGATTTGGAAGCATCAGAAGGTTGGGATCAAGGCTGGGACGACGACTGGGATGATGAGCCGAAGCCTGCAAATAAATCAAATTCTCAGACAAAGGCAAGCGGATCATCAAACGGGGTCTCAGTTTTGCTCTTAGTAGAGTCGGCGATTCAGATCTCTGTTCCATCAAAATTCTTCGTTGGCGGTGATTCGATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACGATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTTGTTTCCACTCAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAAAAGAATGGAAACGGCAACAGTAAAGAACCATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATTTTCCAGATCGGCGAGCGCGGTCTCGGAGAAGAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATAGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGCGCCGCTGGACCTCCAAAGCTTACTGCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGCGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTCGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCAAAGAACCCAGATTTTCGGAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACCCGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGTTGA ATGAATCGTGATTTGGCGCTCGTGTTCGTGTTCTTTGTTCTTAATCTCGCCTCTCGTGGATCCAATGCTTCTTTCTCTGACCGTATTTGGAATCTTCATCTCCGGTTCGCGCTTTCGAAGGATTCTCCTCAGAGTATAGCTCCGGCTCCGGCTCCTGGCCCTATCTCTGTTTCTCCAACTCCTGCGATTCCGCCATTTCCAAGCTCAACCGATGGATCTTCTATGAAGAAGTGCAACCCGTCGTACAACACTTGTCACGACCTTGAGAACATGACTGCCTGTCTTCTATTCGCAGAAAAAGCAACGATGGAACAATATCTTCTGATCCAGAATGCTGGAGGGACTTCACTGAAAGTGAATGTTATAATTTCCGATACTAAATTCAAGGAGATACAAGTTCCTGAGCACCAATCTAGAAAGGTTAATATTTCAGATGTTCTAGGAAATTCAAAGATTGTATTAGATGCTGGGAGTGGGAAGTGTGAGATTCAGTTAGGATCACTAATGAAAAGTGGCACCACTTTTGAGCAAATCTCTTCGTATGTAACCCATTTAAACCTCGTATCCGGATCATATATACTGCTTTCAATTGTTTTGATCATTGGAGGTGTGTGGGCATGCTGCAAGATAGGAACCAAGGAACGCCATGCTGATGAAGTTCCCTATCAGGAGCTTGAATTGGCAGAGCAGGATTCTTCTCCAACCAACGATTTGGAAGCATCAGAAGGTTGGGATCAAGGCTGGGACGACGACTGGGATGATGAGCCGAAGCCTGCAAATAAATCAAATTCTCAGACAAAGGCAAGCGGATCATCAAACGGGGTCTCAGTTTTGCTCTTAGTAGAGTCGGCGATTCAGATCTCTGTTCCATCAAAATTCTTCGTTGGCGGTGATTCGATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACGATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTTGTTTCCACTCAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAAAAGAATGGAAACGGCAACAGTAAAGAACCATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATTTTCCAGATCGGCGAGCGCGGTCTCGGAGAAGAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATAGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGCGCCGCTGGACCTCCAAAGCTTACTGCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGCGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTCGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCAAAGAACCCAGATTTTCGGAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACCCGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGTTGA MNRDLALVFVFFVLNLASRGSNASFSDRIWNLHLRFALSKDSPQSIAPAPAPGPISVSPTPAIPPFPSSTDGSSMKKCNPSYNTCHDLENMTACLLFAEKATMEQYLLIQNAGGTSLKVNVIISDTKFKEIQVPEHQSRKVNISDVLGNSKIVLDAGSGKCEIQLGSLMKSGTTFEQISSYVTHLNLVSGSYILLSIVLIIGGVWACCKIGTKERHADEVPYQELELAEQDSSPTNDLEASEGWDQGWDDDWDDEPKPANKSNSQTKASGSSNGVSVLLLVESAIQISVPSKFFVGGDSMEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQKSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKKISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC Homology
BLAST of Csor.00g120050.m01 vs. ExPASy Swiss-Prot
Match: Q9ZVH8 (Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS PE=1 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 6.9e-106 Identity = 215/381 (56.43%), Postives = 266/381 (69.82%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. ExPASy Swiss-Prot
Match: P20232 (Transcription elongation factor S-II OS=Drosophila melanogaster OX=7227 GN=TfIIS PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.2e-28 Identity = 108/374 (28.88%), Postives = 160/374 (42.78%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. ExPASy Swiss-Prot
Match: Q2KI09 (Transcription elongation factor A protein 3 OS=Bos taurus OX=9913 GN=TCEA3 PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 5.8e-28 Identity = 109/376 (28.99%), Postives = 174/376 (46.28%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. ExPASy Swiss-Prot
Match: Q15560 (Transcription elongation factor A protein 2 OS=Homo sapiens OX=9606 GN=TCEA2 PE=1 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 8.3e-27 Identity = 104/372 (27.96%), Postives = 164/372 (44.09%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. ExPASy Swiss-Prot
Match: O75764 (Transcription elongation factor A protein 3 OS=Homo sapiens OX=9606 GN=TCEA3 PE=1 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 8.3e-27 Identity = 107/369 (29.00%), Postives = 177/369 (47.97%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. NCBI nr
Match: KAG6602582.1 (Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 1282 bits (3317), Expect = 0.0 Identity = 673/673 (100.00%), Postives = 673/673 (100.00%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. NCBI nr
Match: XP_022957122.1 (transcription elongation factor TFIIS-like [Cucurbita moschata]) HSP 1 Score: 703 bits (1815), Expect = 8.99e-250 Identity = 371/374 (99.20%), Postives = 374/374 (100.00%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. NCBI nr
Match: KAG7033260.1 (Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 702 bits (1813), Expect = 1.81e-249 Identity = 371/374 (99.20%), Postives = 373/374 (99.73%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. NCBI nr
Match: XP_023531955.1 (transcription elongation factor TFIIS-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 698 bits (1801), Expect = 1.21e-247 Identity = 369/374 (98.66%), Postives = 372/374 (99.47%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. NCBI nr
Match: XP_022989946.1 (transcription elongation factor TFIIS-like [Cucurbita maxima]) HSP 1 Score: 694 bits (1790), Expect = 5.65e-246 Identity = 367/374 (98.13%), Postives = 371/374 (99.20%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. ExPASy TrEMBL
Match: A0A6J1GYA3 (transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC111458597 PE=4 SV=1) HSP 1 Score: 703 bits (1815), Expect = 4.35e-250 Identity = 371/374 (99.20%), Postives = 374/374 (100.00%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. ExPASy TrEMBL
Match: A0A6J1JLK7 (transcription elongation factor TFIIS-like OS=Cucurbita maxima OX=3661 GN=LOC111486982 PE=4 SV=1) HSP 1 Score: 694 bits (1790), Expect = 2.74e-246 Identity = 367/374 (98.13%), Postives = 371/374 (99.20%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. ExPASy TrEMBL
Match: A0A0A0KDH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1) HSP 1 Score: 640 bits (1652), Expect = 2.05e-225 Identity = 339/374 (90.64%), Postives = 354/374 (94.65%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. ExPASy TrEMBL
Match: A0A5A7U9K1 (Transcription elongation factor TFIIS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002160 PE=4 SV=1) HSP 1 Score: 639 bits (1648), Expect = 8.31e-225 Identity = 338/374 (90.37%), Postives = 353/374 (94.39%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. ExPASy TrEMBL
Match: A0A1S3C448 (transcription elongation factor TFIIS OS=Cucumis melo OX=3656 GN=LOC103496629 PE=4 SV=1) HSP 1 Score: 639 bits (1648), Expect = 8.31e-225 Identity = 338/374 (90.37%), Postives = 353/374 (94.39%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. TAIR 10
Match: AT2G38560.1 (transcript elongation factor IIS ) HSP 1 Score: 386.3 bits (991), Expect = 4.9e-107 Identity = 215/381 (56.43%), Postives = 266/381 (69.82%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. TAIR 10
Match: AT3G51580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1768 Blast hits to 1607 proteins in 294 species: Archae - 2; Bacteria - 552; Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38; Other Eukaryotes - 253 (source: NCBI BLink). ) HSP 1 Score: 124.4 bits (311), Expect = 3.5e-28 Identity = 83/258 (32.17%), Postives = 132/258 (51.16%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. TAIR 10
Match: AT3G51580.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. ) HSP 1 Score: 112.5 bits (280), Expect = 1.4e-24 Identity = 83/278 (29.86%), Postives = 132/278 (47.48%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. TAIR 10
Match: AT2G42730.1 (F-box family protein ) HSP 1 Score: 101.3 bits (251), Expect = 3.1e-21 Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = 0
BLAST of Csor.00g120050.m01 vs. TAIR 10
Match: AT4G18720.1 (Transcription factor IIS protein ) HSP 1 Score: 99.0 bits (245), Expect = 1.6e-20 Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following internal feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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