Csor.00g120050 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g120050
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription elongation factor TFIIS-like
Location	Csor_Chr04: 20418641 .. 20422753 (-)
RNA-Seq Expression	Csor.00g120050
Synteny	Csor.00g120050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCGTGATTTGGCGCTCGTGTTCGTGTTCTTTGTTCTTAATCTCGCCTCTCGTGGATCCAATGCTTCTTTCTCTGACCGTATTTGGAATCTTCATCTCCGGTTCGCGCTTTCGAAGGATTCTCCTCAGGTTTGTTTGATTTTGAATTTCGATCTTCTTCTTGTTTATGCAACTTTTGGATTGCGATTGACTTCTAAATTTGTATTTCGCCTTTTCGATTCTTCAGAGTATAGCTCCGGCTCCGGCTCCTGGCCCTATCTCTGTTTCTCCAACTCCTGCGATTCCGCCATTTCCAAGCTCAACCGATGGATCTTCTATGAAGAAGTGCAACCCGTCGTACAACACTTGTCACGACCTTGAGAACATGACTGCCTGTCTTCTATTCGCAGAAAAAGGTAATTCCGTTTTTCCCCAATATCATATCATGAGATGATTTTCCCCCAATAAATTGCGAAAAGATTGTTTTCTCACAGCAACGATGGAACAATATCTTCTGATCCAGAATGCTGGAGGGACTTCACTGAAAGTGAATGTTATAATTTCCGATACTAAATTCAAGGAGATACAAGTTCCTGAGCACCAATCTAGAAAGGTACTCTTTGTTAATCTTTGCTGGATCATCACGAGGATAGCTATTTCAAGTTCCGTATTCTGTTTCAGGTTAATATTTCAGATGTTCTAGGAAATTCAAAGATTGTATTAGATGCTGGGAGTGGGAAGTGTGAGATTCAGTTAGGATCACTAATGAAAAGTGGCACCACTTTTGAGCAAATCTCTTCGTATGTAACCCATTTAAACCTCGTATCCGGATCATATATACTGCTTTCAATTGTTTTGATCATTGGAGGTGTGTGGGCATGCTGCAAGATAGGAACCAAGGAACGCCATGCTGATGAAGTTCCCTATCAGGAGCTTGAATTGGCAGAGCAGGATTCTTCTCCAACCAACGATTTGGAAGCATCAGAAGGTTGGGATCAAGGCTGGGACGACGACTGGGATGATGAGCCGAAGCCTGCAAATAAATCAAATTCTCAGACAAAGGCAAGCGGATCATCAAACGGTATTAGCTCTAGAACTTCTGGGAAATGATATGGGACGATTTTAGGTACAGGATAATGAATGATGTTGAATATGTCTGCTCATCACAATAGATGGGCTTTTTTTCTTCTTTGAAGAACAATAGGGGTCTCAGTTTTGCTCTTAGTAGAGGTATGTCAACATTTCAATTCAAATTTGAACTATGTAGATACCTATAACTTTTAAATCTTATAGTTTCATTAGTCTCACAAATTTCCAAGGTATCATTTTCATTTTATATTGAATTTATCCTCTATATTTGTTAGTGTGGCTCCTCCTTTTCAACTAATAATAGTAATTGTATAAAGAATTTTCTTAAAATGATACAGAAGTTTTATCTTTTATTGTTGCTTTTTATTCTATCGTGGTGTGTGAACGAAGATTCTGGGCTTCTGAGGGGTGGATCGTGAGACCGTTGGGGAGAGAACGAAACCATCTTTGATTAATGAGCATATTATGACCACCATCTTTGTACTCTTAAATAAGATATCATATTAACAACATTATTTTGAGAATATTTTTTTTTTCCTTTCTAGAGTACAATATACAAAGATCTAACATGGTGCCTTCGGTATAACAAGAGTATTTTATAAGGATGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTGAAAAACAGGTTGATTTATGGGTTGCCTAAAAATTTATCAGGTTGAATTGAAATTAACAGATATAAATTATATAATTATATGTACATCTATCTATTTAATTTCTATAATTATTTATTCTCTAACCTTTCTTAACCATAATTTTCAACTATTTTAAAGATAATTTTTTAAAACAATATATTAAAACTGAATTATAAATTTTATTTAAATATTTAAAATAAATAAATAGCTATTTTAAAAAATAATATTTTACTTTTATTTTAAAAATTATTGATTAGGTTGGATTTGTTTATTATTTAATCATGAAACTTTTAAAACACACAAAATTTGTTGAGTCAAAAGAGTGAAACCGAATGAAATACCCAAAACCCCCTTAGGATTCTCACTCTGCCTATGGGTAAATAGGTAAATCAGAGCTATTATGACCTGTTCTTCGCTCTTAAGATCTTACGGTAAATCTGTATGCCACGTTTTTCGTCTCTGGCCGTCCGATTTAATTCCTATCTTGCTCCGTCTACCCTTATACCTCATCTCCTAGGCCTCGTTTCAATTTCTTTACTCTCTCCGCCGTCTCTCTGCCGAAAAAGGGATTTTTCCAAAGCCGATCCCGATTTATTTTCCGTTGTTGTTTTTGATTTCTTCTATTAAGTGTGGTATTGCGAGCGTTTTTGCAGTCGGCGATTCAGATCTCTGTAAGTGTTACTTATTCGAAATCGATCAATTGCCATCGGCAATGCGTTTTCTTTTGATTTGATGGTATCTTTTTGCTTGTTCATTGAGAAAAGAACTCGAATTCGATATTGATTGCAATACCCCCTGCATGCGTCGTTTTTCTCATTCCGTTGTGTTGTTGGGATCTTATCGTTCTTGGAATGTGGTCGTTAGGTTCCATCAAAATTCTTCGTTGGCGGTGATTCGATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACGATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTTGTTTCCACTCAGGTTTTCTTCTCACTATACTTGAAATTTGTTTCTTTTGTTGATGGTGGATGGATACTCAAAATGTAAACAGCCGGTTAGTTTATAAAATCGTACATGGTTTTTGATATGGACTAAGCCTAAATTCCTTGTTTGATCGTCAACGAATTGGTTTCATAACGAGCTGCGTTACTCTGTTTCATCTGTTATTTACGTAGTTCATAACGAAATCAACTCATTGCAAGTTTTTGGAACAATAATACTGGAGTCATAGCTCTTGTTATATATTGTTTTCTGGATTTTTTTTTTCAATCCATTTTCCTTTGTAATTGAGGTCCATTTTCATGCGTTGCTCAAGATTCTATATCTTGCCTTCCATAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAAAAGAATGGAAACGGCAACAGTAAAGAACCATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATTTTCCAGATCGGCGAGCGCGGTCTCGGAGAAGAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATAGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGCGCCGCTGGACCTCCAAAGCTTACTGCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGCGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTCGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCAAAGAACCCAGATTTTCGGAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACCCGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGTTGA

mRNA sequence

ATGAATCGTGATTTGGCGCTCGTGTTCGTGTTCTTTGTTCTTAATCTCGCCTCTCGTGGATCCAATGCTTCTTTCTCTGACCGTATTTGGAATCTTCATCTCCGGTTCGCGCTTTCGAAGGATTCTCCTCAGAGTATAGCTCCGGCTCCGGCTCCTGGCCCTATCTCTGTTTCTCCAACTCCTGCGATTCCGCCATTTCCAAGCTCAACCGATGGATCTTCTATGAAGAAGTGCAACCCGTCGTACAACACTTGTCACGACCTTGAGAACATGACTGCCTGTCTTCTATTCGCAGAAAAAGCAACGATGGAACAATATCTTCTGATCCAGAATGCTGGAGGGACTTCACTGAAAGTGAATGTTATAATTTCCGATACTAAATTCAAGGAGATACAAGTTCCTGAGCACCAATCTAGAAAGGTTAATATTTCAGATGTTCTAGGAAATTCAAAGATTGTATTAGATGCTGGGAGTGGGAAGTGTGAGATTCAGTTAGGATCACTAATGAAAAGTGGCACCACTTTTGAGCAAATCTCTTCGTATGTAACCCATTTAAACCTCGTATCCGGATCATATATACTGCTTTCAATTGTTTTGATCATTGGAGGTGTGTGGGCATGCTGCAAGATAGGAACCAAGGAACGCCATGCTGATGAAGTTCCCTATCAGGAGCTTGAATTGGCAGAGCAGGATTCTTCTCCAACCAACGATTTGGAAGCATCAGAAGGTTGGGATCAAGGCTGGGACGACGACTGGGATGATGAGCCGAAGCCTGCAAATAAATCAAATTCTCAGACAAAGGCAAGCGGATCATCAAACGGGGTCTCAGTTTTGCTCTTAGTAGAGTCGGCGATTCAGATCTCTGTTCCATCAAAATTCTTCGTTGGCGGTGATTCGATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACGATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTTGTTTCCACTCAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAAAAGAATGGAAACGGCAACAGTAAAGAACCATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATTTTCCAGATCGGCGAGCGCGGTCTCGGAGAAGAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATAGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGCGCCGCTGGACCTCCAAAGCTTACTGCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGCGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTCGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCAAAGAACCCAGATTTTCGGAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACCCGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGTTGA

Coding sequence (CDS)

ATGAATCGTGATTTGGCGCTCGTGTTCGTGTTCTTTGTTCTTAATCTCGCCTCTCGTGGATCCAATGCTTCTTTCTCTGACCGTATTTGGAATCTTCATCTCCGGTTCGCGCTTTCGAAGGATTCTCCTCAGAGTATAGCTCCGGCTCCGGCTCCTGGCCCTATCTCTGTTTCTCCAACTCCTGCGATTCCGCCATTTCCAAGCTCAACCGATGGATCTTCTATGAAGAAGTGCAACCCGTCGTACAACACTTGTCACGACCTTGAGAACATGACTGCCTGTCTTCTATTCGCAGAAAAAGCAACGATGGAACAATATCTTCTGATCCAGAATGCTGGAGGGACTTCACTGAAAGTGAATGTTATAATTTCCGATACTAAATTCAAGGAGATACAAGTTCCTGAGCACCAATCTAGAAAGGTTAATATTTCAGATGTTCTAGGAAATTCAAAGATTGTATTAGATGCTGGGAGTGGGAAGTGTGAGATTCAGTTAGGATCACTAATGAAAAGTGGCACCACTTTTGAGCAAATCTCTTCGTATGTAACCCATTTAAACCTCGTATCCGGATCATATATACTGCTTTCAATTGTTTTGATCATTGGAGGTGTGTGGGCATGCTGCAAGATAGGAACCAAGGAACGCCATGCTGATGAAGTTCCCTATCAGGAGCTTGAATTGGCAGAGCAGGATTCTTCTCCAACCAACGATTTGGAAGCATCAGAAGGTTGGGATCAAGGCTGGGACGACGACTGGGATGATGAGCCGAAGCCTGCAAATAAATCAAATTCTCAGACAAAGGCAAGCGGATCATCAAACGGGGTCTCAGTTTTGCTCTTAGTAGAGTCGGCGATTCAGATCTCTGTTCCATCAAAATTCTTCGTTGGCGGTGATTCGATGGAGAAAGAGCTGGTCGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGACGCCGCTGCAGCACGATCAAATGATGGGGGAGCCGAGGAAAGTCGTTGTCTTGATGCCCTACGGCAGCTCAAGAAATTTCCTGTTACATATCAAATCCTTGTTTCCACTCAGGTTGGGAAGCGCCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAAGACTATGCTTCTGACTTGATTGAGATGTGGAAGGATATAGTAATCAAGGAGACTAACAAGAATAAAAAGAATGGAAACGGCAACAGTAAAGAACCATCCAAAATTGGTTCTCCCAGTGCAGAGTCCGTTAAGGTGGAGAACTTGCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTTGAGCAATTCGATAGGAATGGTTCCACAAGCTCTGTTAAATTTTCCAGATCGGCGAGCGCGGTCTCGGAGAAGAACTCTGTTAAGGTTGAAAAAACTGATTCAGTGGTCAAGGTGGAAAGGATAGTTAAAGAAGAGAAGAAAATCTCTATTGAAAAGAAACCAAGCGGCGCCGCTGGACCTCCAAAGCTTACTGCCATGATCAAATCAAAAGATGCTGCTCGGGACAAAATAAGAGAACTTCTCGTTGAGGCCTTCTCCAAGGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTAAATGCAAGCGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTCGAAAATTGGGGAGGTTCTACTGGGGCACAGAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCAAAGAACCCAGATTTTCGGAGAAAAGTTCTTCTTGGGCTTATCAAGCCAGAAAGGATGACCAACTTGAGCACAACTGATATGGCAAGTGATCAGAGAAAACGTGAAAACGAAGAGATTGCACAAAAAGCACTATTCGAATGTGAGCGAGGAGGAGCTCCAAAAGCTACCACCGATCAATTCAAATGTGGTCGATGCGGTCAACGCAAGACGACCTACTATCAATTGCAGACCCGGAGTGCTGATGAACCTATGACAACGTTTGTAACTTGTGTAAACTGCAATAATCATTGGAAGTTCTGTTGA

Protein sequence

MNRDLALVFVFFVLNLASRGSNASFSDRIWNLHLRFALSKDSPQSIAPAPAPGPISVSPTPAIPPFPSSTDGSSMKKCNPSYNTCHDLENMTACLLFAEKATMEQYLLIQNAGGTSLKVNVIISDTKFKEIQVPEHQSRKVNISDVLGNSKIVLDAGSGKCEIQLGSLMKSGTTFEQISSYVTHLNLVSGSYILLSIVLIIGGVWACCKIGTKERHADEVPYQELELAEQDSSPTNDLEASEGWDQGWDDDWDDEPKPANKSNSQTKASGSSNGVSVLLLVESAIQISVPSKFFVGGDSMEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQKSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKKISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC

Homology

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BLAST of Csor.00g120050 vs. ExPASy Swiss-Prot
Match: Q9ZVH8 (Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS PE=1 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 6.9e-106
Identity = 215/381 (56.43%), Postives = 266/381 (69.82%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARS-NDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRL 359
           ME +L++LFE AKKAADAAA       G E S+C+DAL+QLKKFPVTY  LV+TQVGK+L
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 360 RHLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAES------ 419
           R L KHP + I+  A+DL+E+WK +VI+ET K KK    N  + +K+     E       
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAP 120

Query: 420 VKVENLQKSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVER 479
           VKV+ LQ+  S K  +V + E    N   + VK  R    +   N  K++     VK E+
Sbjct: 121 VKVQKLQRGDSAKSIKVERKE--PDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKDEK 180

Query: 480 IVKEEKKISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEV 539
           + K+ +  S++     A  PPKLTAM+K  D  RDKIRELLVEA  +V GEAD+   + V
Sbjct: 181 VSKDNQS-SMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESV 240

Query: 540 NASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM 599
           NASDP+RVAVSVES+MFE  G STGAQK KYRSIMFNL+D  NPD RR+VL G I PE++
Sbjct: 241 NASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKL 300

Query: 600 TNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRS 659
             LS  DMASD+RK+EN +I +KALF+CERG A KA+TDQFKCGRCGQRK TYYQ+QTRS
Sbjct: 301 ITLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRS 360

Query: 660 ADEPMTTFVTCVNCNNHWKFC 674
           ADEPMTT+VTCVNC+NHWKFC
Sbjct: 361 ADEPMTTYVTCVNCDNHWKFC 378

[Close]

BLAST of Csor.00g120050 vs. ExPASy Swiss-Prot
Match: P20232 (Transcription elongation factor S-II OS=Drosophila melanogaster OX=7227 GN=TfIIS PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-28
Identity = 108/374 (28.88%), Postives = 160/374 (42.78%), Query Frame = 0


Query: 306 ELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHP 365
           E+F   KK +  A+      G  + + LD L+ L+   +   IL  T++G  +  L K  
Sbjct: 6   EVFRIQKKMSKMAS-----DGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSS 65

Query: 366 K-KKIQDYASDLIEMWKDIVIK-----ETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 425
           K  ++   A  LI+ WK  +         N + K G+ N+   SK  S +  S  +    
Sbjct: 66  KDDEVIALAKTLIKNWKRFLASPAPTTPNNSSAKEGSSNNSSASKSTSAAKSSSSISGKD 125

Query: 426 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 485
           KSSS      S  +  ++ GSTSS + S                                
Sbjct: 126 KSSSS-----SSSKDKEKKGSTSSSQTS-------------------------------- 185

Query: 486 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 545
                 PSG              DA R K RE+L  A     GE  E         +P  
Sbjct: 186 -----FPSGG-----------MTDAVRIKCREMLATALK--IGEVPE------GCGEPEE 245

Query: 546 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 605
           +A  +E  ++  +  +    K + RS + NLKDPKNP  R   + G +  +++  ++  +
Sbjct: 246 MAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEE 305

Query: 606 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 665
           MASD+ K+  E+  ++A+ + +        TD  KC +C +R  TY QLQTRSADEPMTT
Sbjct: 306 MASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTT 313

Query: 666 FVTCVNCNNHWKFC 674
           FV C  C N WKFC
Sbjct: 366 FVMCNECGNRWKFC 313

[Close]

BLAST of Csor.00g120050 vs. ExPASy Swiss-Prot
Match: Q2KI09 (Transcription elongation factor A protein 3 OS=Bos taurus OX=9913 GN=TCEA3 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.8e-28
Identity = 109/376 (28.99%), Postives = 174/376 (46.28%), Query Frame = 0


Query: 306 ELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKH- 365
           EL   AKK     A +  +G       LD L++L  + ++ Q+L +T++G  +  + KH 
Sbjct: 6   ELLRIAKKLEKMVARKKTEG------ALDLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHC 65

Query: 366 PKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQKSSSM 425
             K++   A  LI  WK ++        + G    K   K      + +   + +  +S+
Sbjct: 66  SNKEVVALAKVLIRNWKQLLDSPATPKGEKGEERVKAKKK-----EKGLDCSDWKPETSL 125

Query: 426 KVERVSKVEQ-FDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKKISIE 485
              R  +VE+  DR  S  S      +SA S      +E+++S          + K    
Sbjct: 126 SPPRKKRVEEPKDRRDSVDS-----KSSATSSPKRPSMERSNS---------SKSKAETP 185

Query: 486 KKPSGAAGPP------KLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDP 545
           + PS  + P        L     + D+ RDK  E+L  A      +AD+D  D     D 
Sbjct: 186 RTPSSPSSPTFAPSVCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD- 245

Query: 546 IRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLST 605
            ++A  +E  +++    +    + + RS + NLKDP+NP  RR VL G I    +  ++ 
Sbjct: 246 -KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTA 305

Query: 606 TDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPM 665
            +MASD+ +     + Q+A+ E +       TTD F+C +C ++  TY Q+QTRSADEPM
Sbjct: 306 EEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPM 349

Query: 666 TTFVTCVNCNNHWKFC 674
           TTFV C  C N WKFC
Sbjct: 366 TTFVLCNECGNRWKFC 349

[Close]

BLAST of Csor.00g120050 vs. ExPASy Swiss-Prot
Match: Q15560 (Transcription elongation factor A protein 2 OS=Homo sapiens OX=9606 GN=TCEA2 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 8.3e-27
Identity = 104/372 (27.96%), Postives = 164/372 (44.09%), Query Frame = 0


Query: 306 ELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHP 365
           E+   A++       +S +G       +D LR+LK  P+T  +L ST+VG  +  L K  
Sbjct: 7   EIARIARRLDKMVTKKSAEG------AMDLLRELKAMPITLHLLQSTRVGMSVNALRKQS 66

Query: 366 K-KKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQKSSSM 425
             +++   A  LI+ WK ++     K ++ G G     S                     
Sbjct: 67  SDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTS--------------------- 126

Query: 426 KVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKKISIEK 485
                                 SR AS   + +                    K+  + +
Sbjct: 127 ----------------------SRDASEAPDPS-------------------RKRPELPR 186

Query: 486 KPSGAAGPPKLTA---MIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRVA 545
            PS     P++T    +  + DA R+K RE+L  A      + D D +     +D  R++
Sbjct: 187 APS----TPRITTFPPVPVTCDAVRNKCREMLTAAL-----QTDHDHV--AIGADCERLS 246

Query: 546 VSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMA 605
             +E  +F + G +    K + RS + NLKD KNPD RR VL G I P+++  +++ +MA
Sbjct: 247 AQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMA 299

Query: 606 SDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFV 665
           SD+ K   + + ++A+ E +        TD F CG+C ++  TY Q+QTRS+DEPMTTFV
Sbjct: 307 SDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFV 299

Query: 666 TCVNCNNHWKFC 674
            C  C N WKFC
Sbjct: 367 VCNECGNRWKFC 299

[Close]

BLAST of Csor.00g120050 vs. ExPASy Swiss-Prot
Match: O75764 (Transcription elongation factor A protein 3 OS=Homo sapiens OX=9606 GN=TCEA3 PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 8.3e-27
Identity = 107/369 (29.00%), Postives = 177/369 (47.97%), Query Frame = 0


Query: 306 ELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKH- 365
           EL   AKK     A ++ +G       LD L++L    ++ Q+L +T++G  +  + KH 
Sbjct: 6   ELLRIAKKLEKMVARKNTEG------ALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHC 65

Query: 366 PKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQKSSSM 425
             K++   A  LI+ WK ++  ++    K   G  +E +K      + ++  + +  + +
Sbjct: 66  SDKEVVSLAKVLIKNWKRLL--DSPGPPKGEKGEEREKAK---KKEKGLECSDWKPEAGL 125

Query: 426 KVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKKISIEK 485
              R  + +   R  S  S      +SA S      VE+++S    +   +  K  S   
Sbjct: 126 SPPRKKREDPKTRRDSVDS-----KSSASSSPKRPSVERSNS---SKSKAESPKTPSSPL 185

Query: 486 KPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRVAVSV 545
            P+ A+    L     + D+ RDK  E+L  A      +AD+D  D     D  ++A  +
Sbjct: 186 TPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEI 245

Query: 546 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQ 605
           E  +++    +    + + RS + NLKDP+NP  RR VL G I    +  ++  +MASD+
Sbjct: 246 EDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDE 305

Query: 606 RKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 665
            +     + Q+A+ E +       TTD F+C +C ++  TY Q+QTRSADEPMTTFV C 
Sbjct: 306 LRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCN 348

Query: 666 NCNNHWKFC 674
            C N WKFC
Sbjct: 366 ECGNRWKFC 348

[Close]

BLAST of Csor.00g120050 vs. NCBI nr
Match: KAG6602582.1 (Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1282 bits (3317), Expect = 0.0
Identity = 673/673 (100.00%), Postives = 673/673 (100.00%), Query Frame = 0


Query: 1   MNRDLALVFVFFVLNLASRGSNASFSDRIWNLHLRFALSKDSPQSIAPAPAPGPISVSPT 60
           MNRDLALVFVFFVLNLASRGSNASFSDRIWNLHLRFALSKDSPQSIAPAPAPGPISVSPT
Sbjct: 1   MNRDLALVFVFFVLNLASRGSNASFSDRIWNLHLRFALSKDSPQSIAPAPAPGPISVSPT 60

Query: 61  PAIPPFPSSTDGSSMKKCNPSYNTCHDLENMTACLLFAEKATMEQYLLIQNAGGTSLKVN 120
           PAIPPFPSSTDGSSMKKCNPSYNTCHDLENMTACLLFAEKATMEQYLLIQNAGGTSLKVN
Sbjct: 61  PAIPPFPSSTDGSSMKKCNPSYNTCHDLENMTACLLFAEKATMEQYLLIQNAGGTSLKVN 120

Query: 121 VIISDTKFKEIQVPEHQSRKVNISDVLGNSKIVLDAGSGKCEIQLGSLMKSGTTFEQISS 180
           VIISDTKFKEIQVPEHQSRKVNISDVLGNSKIVLDAGSGKCEIQLGSLMKSGTTFEQISS
Sbjct: 121 VIISDTKFKEIQVPEHQSRKVNISDVLGNSKIVLDAGSGKCEIQLGSLMKSGTTFEQISS 180

Query: 181 YVTHLNLVSGSYILLSIVLIIGGVWACCKIGTKERHADEVPYQELELAEQDSSPTNDLEA 240
           YVTHLNLVSGSYILLSIVLIIGGVWACCKIGTKERHADEVPYQELELAEQDSSPTNDLEA
Sbjct: 181 YVTHLNLVSGSYILLSIVLIIGGVWACCKIGTKERHADEVPYQELELAEQDSSPTNDLEA 240

Query: 241 SEGWDQGWDDDWDDEPKPANKSNSQTKASGSSNGVSVLLLVESAIQISVPSKFFVGGDSM 300
           SEGWDQGWDDDWDDEPKPANKSNSQTKASGSSNGVSVLLLVESAIQISVPSKFFVGGDSM
Sbjct: 241 SEGWDQGWDDDWDDEPKPANKSNSQTKASGSSNGVSVLLLVESAIQISVPSKFFVGGDSM 300

Query: 301 EKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRH 360
           EKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRH
Sbjct: 301 EKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRH 360

Query: 361 LTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQK 420
           LTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQK
Sbjct: 361 LTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQK 420

Query: 421 SSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKKI 480
           SSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKKI
Sbjct: 421 SSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKKI 480

Query: 481 SIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRV 540
           SIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRV
Sbjct: 481 SIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIRV 540

Query: 541 AVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDM 600
           AVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDM
Sbjct: 541 AVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDM 600

Query: 601 ASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 660
           ASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF
Sbjct: 601 ASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 660

Query: 661 VTCVNCNNHWKFC 673
           VTCVNCNNHWKFC
Sbjct: 661 VTCVNCNNHWKFC 673

[Close]

BLAST of Csor.00g120050 vs. NCBI nr
Match: XP_022957122.1 (transcription elongation factor TFIIS-like [Cucurbita moschata])

HSP 1 Score: 703 bits (1815), Expect = 8.99e-250
Identity = 371/374 (99.20%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 359
           MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 360 HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 419
           HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 120

Query: 420 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 479
           KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKK 180

Query: 480 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 539
           ISIEKKPSGAAGPPKLT+MIKSKDAARDKIRELLVEAFSKVPGEADEDV+DEVNASDPIR
Sbjct: 181 ISIEKKPSGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVIDEVNASDPIR 240

Query: 540 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 599
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 600 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 659
           MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 660 FVTCVNCNNHWKFC 673
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

[Close]

BLAST of Csor.00g120050 vs. NCBI nr
Match: KAG7033260.1 (Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 702 bits (1813), Expect = 1.81e-249
Identity = 371/374 (99.20%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 359
           MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 360 HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 419
           HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNG+SKEPSKIGSPSAESVKVENLQ
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGDSKEPSKIGSPSAESVKVENLQ 120

Query: 420 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 479
           KSSSMK ERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK
Sbjct: 121 KSSSMKAERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 180

Query: 480 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 539
           ISIEKKPSGAAGPPKLT+MIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR
Sbjct: 181 ISIEKKPSGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240

Query: 540 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 599
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 600 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 659
           MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 660 FVTCVNCNNHWKFC 673
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

[Close]

BLAST of Csor.00g120050 vs. NCBI nr
Match: XP_023531955.1 (transcription elongation factor TFIIS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 698 bits (1801), Expect = 1.21e-247
Identity = 369/374 (98.66%), Postives = 372/374 (99.47%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 359
           MEKELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 360 HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 419
           HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKE SKIGSPSAESVKVENLQ
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKETSKIGSPSAESVKVENLQ 120

Query: 420 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 479
           KSSSMKVERVSKVEQFDRNGSTSSVK+SRSASAVSEKNSVKVEKTDSVVKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGSTSSVKYSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKK 180

Query: 480 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 539
           ISIEKKPSGAAGPPKLT+MIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR
Sbjct: 181 ISIEKKPSGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240

Query: 540 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 599
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 600 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 659
           MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 660 FVTCVNCNNHWKFC 673
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

[Close]

BLAST of Csor.00g120050 vs. NCBI nr
Match: XP_022989946.1 (transcription elongation factor TFIIS-like [Cucurbita maxima])

HSP 1 Score: 694 bits (1790), Expect = 5.65e-246
Identity = 367/374 (98.13%), Postives = 371/374 (99.20%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 359
           MEKELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 360 HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 419
           HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVEN Q
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENFQ 120

Query: 420 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 479
           KSSSMKVERVSKVEQF+R GSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFNRIGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKK 180

Query: 480 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 539
           ISIEKKPSGAAGPPKLT+MIKSKDAARDKIRELLVEAFSKVPGEADEDV+DEVNASDPIR
Sbjct: 181 ISIEKKPSGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVIDEVNASDPIR 240

Query: 540 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 599
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 600 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 659
           MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 660 FVTCVNCNNHWKFC 673
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

[Close]

BLAST of Csor.00g120050 vs. ExPASy TrEMBL
Match: A0A6J1GYA3 (transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC111458597 PE=4 SV=1)

HSP 1 Score: 703 bits (1815), Expect = 4.35e-250
Identity = 371/374 (99.20%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 359
           MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 360 HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 419
           HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 120

Query: 420 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 479
           KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKK 180

Query: 480 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 539
           ISIEKKPSGAAGPPKLT+MIKSKDAARDKIRELLVEAFSKVPGEADEDV+DEVNASDPIR
Sbjct: 181 ISIEKKPSGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVIDEVNASDPIR 240

Query: 540 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 599
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 600 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 659
           MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 660 FVTCVNCNNHWKFC 673
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

[Close]

BLAST of Csor.00g120050 vs. ExPASy TrEMBL
Match: A0A6J1JLK7 (transcription elongation factor TFIIS-like OS=Cucurbita maxima OX=3661 GN=LOC111486982 PE=4 SV=1)

HSP 1 Score: 694 bits (1790), Expect = 2.74e-246
Identity = 367/374 (98.13%), Postives = 371/374 (99.20%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 359
           MEKELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 360 HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 419
           HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVEN Q
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENFQ 120

Query: 420 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 479
           KSSSMKVERVSKVEQF+R GSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFNRIGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKK 180

Query: 480 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 539
           ISIEKKPSGAAGPPKLT+MIKSKDAARDKIRELLVEAFSKVPGEADEDV+DEVNASDPIR
Sbjct: 181 ISIEKKPSGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVIDEVNASDPIR 240

Query: 540 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 599
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 600 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 659
           MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 660 FVTCVNCNNHWKFC 673
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

[Close]

BLAST of Csor.00g120050 vs. ExPASy TrEMBL
Match: A0A0A0KDH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1)

HSP 1 Score: 640 bits (1652), Expect = 2.05e-225
Identity = 339/374 (90.64%), Postives = 354/374 (94.65%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 359
           ME ELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 360 HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 419
           HLTKHPKKKIQ++ASDLIEMWK+IVIKETNKNKKNGN +SK+  KIGSPSAESVKVE  Q
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQ 120

Query: 420 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 479
           KSSSMKVERVSKVEQFDRNG+TSSVK+S+S S VSE+NSVKVEKTDS+VKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVERVVKEEKK 180

Query: 480 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 539
            S     SGAA PPKLT+MIKSKDAARDKIRELL EAFSKVPGEADE+ MDEVNASDPIR
Sbjct: 181 PS-----SGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIR 240

Query: 540 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 599
           VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM N+ST D
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTAD 300

Query: 600 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 659
           MASDQRKRENEEIAQKALF+CERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 660 FVTCVNCNNHWKFC 673
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 369

[Close]

BLAST of Csor.00g120050 vs. ExPASy TrEMBL
Match: A0A5A7U9K1 (Transcription elongation factor TFIIS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002160 PE=4 SV=1)

HSP 1 Score: 639 bits (1648), Expect = 8.31e-225
Identity = 338/374 (90.37%), Postives = 353/374 (94.39%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 359
           ME ELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 360 HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 419
           HLTKHPKKKIQ++ASDLIEMWK+IVIKETNKNKKNGN +SK+  KIGSPS ESVKVE  Q
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120

Query: 420 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 479
           KSSSMKVERVSKVEQFDRNG+TSSVK+SRS SAVS+ +SVK EKTDSVVKVERIVKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180

Query: 480 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 539
            S     SGAA PPKLT+M+KSKDAARDKIRELL EAFSKVPGEADEDVMDEVNASDPIR
Sbjct: 181 PS-----SGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIR 240

Query: 540 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 599
           VA+SVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM N++T D
Sbjct: 241 VAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTAD 300

Query: 600 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 659
           MASDQRKRENEEIAQKALF+CERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 660 FVTCVNCNNHWKFC 673
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 369

[Close]

BLAST of Csor.00g120050 vs. ExPASy TrEMBL
Match: A0A1S3C448 (transcription elongation factor TFIIS OS=Cucumis melo OX=3656 GN=LOC103496629 PE=4 SV=1)

HSP 1 Score: 639 bits (1648), Expect = 8.31e-225
Identity = 338/374 (90.37%), Postives = 353/374 (94.39%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 359
           ME ELVELFEAAKKAADAAAA SNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 360 HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 419
           HLTKHPKKKIQ++ASDLIEMWK+IVIKETNKNKKNGN +SK+  KIGSPS ESVKVE  Q
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120

Query: 420 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERIVKEEKK 479
           KSSSMKVERVSKVEQFDRNG+TSSVK+SRS SAVS+ +SVK EKTDSVVKVERIVKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180

Query: 480 ISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 539
            S     SGAA PPKLT+M+KSKDAARDKIRELL EAFSKVPGEADEDVMDEVNASDPIR
Sbjct: 181 PS-----SGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIR 240

Query: 540 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 599
           VA+SVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM N++T D
Sbjct: 241 VAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTAD 300

Query: 600 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 659
           MASDQRKRENEEIAQKALF+CERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 660 FVTCVNCNNHWKFC 673
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 369

[Close]

BLAST of Csor.00g120050 vs. TAIR 10
Match: AT2G38560.1 (transcript elongation factor IIS )

HSP 1 Score: 386.3 bits (991), Expect = 4.9e-107
Identity = 215/381 (56.43%), Postives = 266/381 (69.82%), Query Frame = 0


Query: 300 MEKELVELFEAAKKAADAAAARS-NDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRL 359
           ME +L++LFE AKKAADAAA       G E S+C+DAL+QLKKFPVTY  LV+TQVGK+L
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 360 RHLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAES------ 419
           R L KHP + I+  A+DL+E+WK +VI+ET K KK    N  + +K+     E       
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAP 120

Query: 420 VKVENLQKSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVER 479
           VKV+ LQ+  S K  +V + E    N   + VK  R    +   N  K++     VK E+
Sbjct: 121 VKVQKLQRGDSAKSIKVERKE--PDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKDEK 180

Query: 480 IVKEEKKISIEKKPSGAAGPPKLTAMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEV 539
           + K+ +  S++     A  PPKLTAM+K  D  RDKIRELLVEA  +V GEAD+   + V
Sbjct: 181 VSKDNQS-SMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESV 240

Query: 540 NASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM 599
           NASDP+RVAVSVES+MFE  G STGAQK KYRSIMFNL+D  NPD RR+VL G I PE++
Sbjct: 241 NASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKL 300

Query: 600 TNLSTTDMASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRS 659
             LS  DMASD+RK+EN +I +KALF+CERG A KA+TDQFKCGRCGQRK TYYQ+QTRS
Sbjct: 301 ITLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRS 360

Query: 660 ADEPMTTFVTCVNCNNHWKFC 674
           ADEPMTT+VTCVNC+NHWKFC
Sbjct: 361 ADEPMTTYVTCVNCDNHWKFC 378

[Close]

BLAST of Csor.00g120050 vs. TAIR 10
Match: AT3G51580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1768 Blast hits to 1607 proteins in 294 species: Archae - 2; Bacteria - 552; Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38; Other Eukaryotes - 253 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 3.5e-28
Identity = 83/258 (32.17%), Postives = 132/258 (51.16%), Query Frame = 0


Query: 39  SKDS---PQSIAPAP---APGPISVSPTPAIPPF----------PSSTDGSSMKKCNPSY 98
           S+DS   P ++AP P     G     P    PP             S++ +S+  C    
Sbjct: 120 SQDSGKLPANMAPPPKSLESGKNETEPGKESPPLAKDPAKGKDDKGSSESASVDTCVGKS 179

Query: 99  NTCHDLENMTACLLFAEKATMEQYLLIQNAGGTSLKVNVIISDTKFKEIQVPEHQSRKVN 158
           N C    ++ AC L  +K      +L+QN G TSLK  +++     +E+ +P+HQS+KVN
Sbjct: 180 NICRTENSLVACTLSIDKGAANWLILVQNEGETSLKAKIVLPVNALQELTLPKHQSQKVN 239

Query: 159 ISDVLGNSKIVLDAGSGKCEIQLGSLMKSGTTFEQISSYVTHLNLVSGSYILLSIVLIIG 218
           IS     +KI+LD G G+C + +    +S   F    SY   +  ++G+Y L+  V+I G
Sbjct: 240 ISISGDTNKIILDTGKGQCALHMYPSEESTLPF-HFPSYEKLVTPINGAYFLIVSVIIFG 299

Query: 219 GVWACCKIGTKERHADEVPYQELELAE----QDSSPTNDLEASEGWDQGWDDDWDDEPKP 277
           G+WA C      R    VPY+ELEL+     ++ S  +D+E ++ WD+GWDDDWD+    
Sbjct: 300 GIWAFCLCRKNRRAGSGVPYRELELSGGPGLENESGVHDVETAD-WDEGWDDDWDENNAV 359

[Close]

BLAST of Csor.00g120050 vs. TAIR 10
Match: AT3G51580.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. )

HSP 1 Score: 112.5 bits (280), Expect = 1.4e-24
Identity = 83/278 (29.86%), Postives = 132/278 (47.48%), Query Frame = 0


Query: 39  SKDS---PQSIAPAP---APGPISVSPTPAIPPF----------PSSTDGSSMKKCNPSY 98
           S+DS   P ++AP P     G     P    PP             S++ +S+  C    
Sbjct: 120 SQDSGKLPANMAPPPKSLESGKNETEPGKESPPLAKDPAKGKDDKGSSESASVDTCVGKS 179

Query: 99  NTCHDLENMTACLLFAEK--------------------ATMEQYLLIQNAGGTSLKVNVI 158
           N C    ++ AC L  +K                          +L+QN G TSLK  ++
Sbjct: 180 NICRTENSLVACTLSIDKGYETFLDIIVIPQQFARSLLCAANWLILVQNEGETSLKAKIV 239

Query: 159 ISDTKFKEIQVPEHQSRKVNISDVLGNSKIVLDAGSGKCEIQLGSLMKSGTTFEQISSYV 218
           +     +E+ +P+HQS+KVNIS     +KI+LD G G+C + +    +S   F    SY 
Sbjct: 240 LPVNALQELTLPKHQSQKVNISISGDTNKIILDTGKGQCALHMYPSEESTLPF-HFPSYE 299

Query: 219 THLNLVSGSYILLSIVLIIGGVWACCKIGTKERHADEVPYQELELAE----QDSSPTNDL 277
             +  ++G+Y L+  V+I GG+WA C      R    VPY+ELEL+     ++ S  +D+
Sbjct: 300 KLVTPINGAYFLIVSVIIFGGIWAFCLCRKNRRAGSGVPYRELELSGGPGLENESGVHDV 359

[Close]

BLAST of Csor.00g120050 vs. TAIR 10
Match: AT2G42730.1 (F-box family protein )

HSP 1 Score: 101.3 bits (251), Expect = 3.1e-21
Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 493 PKLTAMIKSKDAARDKIRELLVEAFSKVPGE-ADEDVMDEVNASDPIRVAVSVESVMFEN 552
           P  + M K+ D+ RDK+RE+L  +  KV  E  D ++   V A DP  VAVSVES MFE 
Sbjct: 594 PTHSTMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAMFEK 653

Query: 553 WGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMASDQRKRENEE 612
            G   G  KAKYRSI+FN+ D  NPD RRKVL+G I  ER+  +   +M S++ ++E + 
Sbjct: 654 LGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQR 713

Query: 613 IAQKALFECE 622
           I + A F+ E
Sbjct: 714 IKENARFKEE 723

[Close]

BLAST of Csor.00g120050 vs. TAIR 10
Match: AT4G18720.1 (Transcription factor IIS protein )

HSP 1 Score: 99.0 bits (245), Expect = 1.6e-20
Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = 0


Query: 493 PKLTAMIKSKDAARDKIRELLVEAFSKVPGE-ADEDVMDEVNASDPIRVAVSVESVMFEN 552
           P    M K+ D+ RDK+RE+L  + +KV  E  D ++   V A DP  VAVSVE+ MFEN
Sbjct: 105 PTHATMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDPWVVAVSVETAMFEN 164

Query: 553 WGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTDMAS 603
            G   G QKAKYRSI+FN+ D  NPD RRKVLLG I  ER+  +   +M S
Sbjct: 165 LGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEMGS 215

The following BLAST results are available for this feature:

BLAST of Csor.00g120050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVH8	6.9e-106	56.43	Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS P...	[more]
P20232	1.2e-28	28.88	Transcription elongation factor S-II OS=Drosophila melanogaster OX=7227 GN=TfIIS...	[more]
Q2KI09	5.8e-28	28.99	Transcription elongation factor A protein 3 OS=Bos taurus OX=9913 GN=TCEA3 PE=2 ...	[more]
Q15560	8.3e-27	27.96	Transcription elongation factor A protein 2 OS=Homo sapiens OX=9606 GN=TCEA2 PE=...	[more]
O75764	8.3e-27	29.00	Transcription elongation factor A protein 3 OS=Homo sapiens OX=9606 GN=TCEA3 PE=...	[more]

BLAST of Csor.00g120050 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602582.1	0.0	100.00	Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022957122.1	8.99e-250	99.20	transcription elongation factor TFIIS-like [Cucurbita moschata]	[more]
KAG7033260.1	1.81e-249	99.20	Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_023531955.1	1.21e-247	98.66	transcription elongation factor TFIIS-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989946.1	5.65e-246	98.13	transcription elongation factor TFIIS-like [Cucurbita maxima]	[more]

BLAST of Csor.00g120050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYA3	4.35e-250	99.20	transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JLK7	2.74e-246	98.13	transcription elongation factor TFIIS-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0KDH9	2.05e-225	90.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1	[more]
A0A5A7U9K1	8.31e-225	90.37	Transcription elongation factor TFIIS OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C448	8.31e-225	90.37	transcription elongation factor TFIIS OS=Cucumis melo OX=3656 GN=LOC103496629 PE...	[more]

BLAST of Csor.00g120050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38560.1	4.9e-107	56.43	transcript elongation factor IIS	[more]
AT3G51580.1	3.5e-28	32.17	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G51580.2	1.4e-24	29.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G42730.1	3.1e-21	45.38	F-box family protein	[more]
AT4G18720.1	1.6e-20	50.45	Transcription factor IIS protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003618	Transcription elongation factor S-II, central domain	SMART	SM00510	mid_6	coord: 503..611 e-value: 4.2E-34 score: 129.3
IPR003618	Transcription elongation factor S-II, central domain	PFAM	PF07500	TFIIS_M	coord: 503..619 e-value: 8.2E-30 score: 103.6
IPR003618	Transcription elongation factor S-II, central domain	PROSITE	PS51321	TFIIS_CENTRAL	coord: 505..628 score: 32.060188
IPR003617	Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type	SMART	SM00509	TFS2_5	coord: 307..386 e-value: 2.6E-23 score: 93.4
IPR001222	Zinc finger, TFIIS-type	SMART	SM00440	Cys4_2	coord: 633..672 e-value: 9.7E-24 score: 94.9
IPR001222	Zinc finger, TFIIS-type	PFAM	PF01096	TFIIS_C	coord: 633..671 e-value: 2.3E-19 score: 68.9
IPR001222	Zinc finger, TFIIS-type	PROSITE	PS00466	ZF_TFIIS_1	coord: 635..670
IPR001222	Zinc finger, TFIIS-type	PROSITE	PS51133	ZF_TFIIS_2	coord: 631..671 score: 14.636859
None	No IPR available	GENE3D	2.20.25.10		coord: 602..673 e-value: 2.8E-27 score: 96.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..420
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 390..420
None	No IPR available	PANTHER	PTHR11477	TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN	coord: 300..673
None	No IPR available	PANTHER	PTHR11477:SF36	TRANSCRIPTION ELONGATION FACTOR TFIIS	coord: 300..673
None	No IPR available	CDD	cd13749	Zn-ribbon_TFIIS	coord: 626..672 e-value: 9.34666E-31 score: 112.314
None	No IPR available	CDD	cd00183	TFIIS_I	coord: 323..384 e-value: 4.30692E-17 score: 74.267
None	No IPR available	SUPERFAMILY	57783	Zinc beta-ribbon	coord: 618..671
IPR017923	Transcription factor IIS, N-terminal	PFAM	PF08711	Med26	coord: 335..384 e-value: 5.2E-11 score: 42.4
IPR017923	Transcription factor IIS, N-terminal	PROSITE	PS51319	TFIIS_N	coord: 309..387 score: 20.947113
IPR006289	Transcription elongation factor, TFIIS	TIGRFAM	TIGR01385	TIGR01385	coord: 311..673 e-value: 1.4E-96 score: 321.6
IPR035441	TFIIS/LEDGF domain superfamily	GENE3D	1.20.930.10	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	coord: 296..400 e-value: 4.8E-24 score: 85.9
IPR035441	TFIIS/LEDGF domain superfamily	SUPERFAMILY	47676	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	coord: 326..399
IPR036575	Transcription elongation factor S-II, central domain superfamily	GENE3D	1.10.472.30		coord: 481..601 e-value: 1.6E-24 score: 88.3
IPR036575	Transcription elongation factor S-II, central domain superfamily	SUPERFAMILY	46942	Elongation factor TFIIS domain 2	coord: 496..603

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g120050.m01	Csor.00g120050.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006414	translational elongation
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding