Csor.00g075380.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g075380.m01
TypemRNA
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 11783635 .. 11786876 (+)
Sequence length804
RNA-Seq ExpressionCsor.00g075380.m01
SyntenyCsor.00g075380.m01
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGTGAACGACGACTGGCTTACGGCGGCCATGGCCGATGATGGAGTGGTGGTCGAGTTGTTGGTGCGGTTGAAGCAATCGCAGGCTGTGTCGCCTTCCAAATCTCCGCTTCCGGTGACGGTGCCTTTCACTTGGGGGATTAGGCAGCTGAGGTCTAGAACGGCGACGACGGTTGGTAGATGTGGCGATGGTGTCTTGGTGAGGAACAATAAGGATGTTGACTCAACCAGATGGAGTCCTACGACGCCGCTTTCGTGGAGCGGTGGAGGTTCGCCTTCTGCTACGCTTGACGGTTATGAGGAGTCTAGCCGTCCGGCTACGCTCTCGCACGCTGCTTCCAGATTTAAGGTTCTTGACTTTTTCTCACTATTCTTATGATTTTGTGTCCTCTGTTTTGGATTTTTGCAGTTTCGTCTCTTATCTCGACTCTGTGTGCGCTCTGCTTTCCCGATCTTTGCGGTTTTTTTTTGCTACGAGTTCTTAAATCTTAGCGCTGGCGTTCTTAATTACGGTTTTCCTTTGGCGGTGGTGTCGGCTGTGGAGTTCAGCGGTCTGGATTCTCTCATGAAACATTCTTATCTCGGAGAACCATCGTATATTGTGTTGTGATTGTTTAGCCATTTGTTTTTCCAAGAATCCGATTCTGATTCCGTATCATGAAACATCTCTTGATTTCCTCGTCATTTTCTTCTACAGCTTAACGCAACAAAATTCCTCTCTCAGAGCTCACACAACTGCAAATCTCTCAATTCCATAACTGCTCTGTATTTTCACCAAACAGTTTCAAGTTCTCGCCATCAATGGCGGACAACCTTCACGAATCACCGTTTGAGAAACTGCTTTTTAATTCAAAAATCCCCGATATACCCCTAGATTCTCCAATCACGTTCACGTGAAGAGACGAGGTCAGCGGATGAACGCTGCTTGAAATTACTTCGCGTTTTCTCCTCGCCTCGATTCAAATCGCCTGTGGACTCGAATTCACTTATTTCTTCAATTTGACCAAAACGCCCTTCCAATCCCTCGCTAGATTCCAAAGCCTTTCAAATCGTACACCGAGTCGATATTTCGTCACACACGAGACTTCCCTATAGAAACTCTCTTCCATCGCCGACGGTTTACTCATGGACCGTTGAAAGCGCCTGGAAACTTCCCTACGGCCATTGTCCTTTCTAATTTTTACCATACTACCCCTTGACGCGTAAAAGATTCATCACAAAGCACGAGGGTATTCTGGTCACACACACACACATACACAAATTCCGAGCCGGTTCGATCGAACCGGATGCCAGATTCGACGGTGGATGACACTGCAAAGTGAGGGCCCAAATCAGATCAGGTAAAGAGGAGAGGCGTTCATAAGAGATAGGTCTGCGTTAGGTTTGAAGAGTAATTATCAGGTGTGGCGATGGTACATGGTTGGTTCCAGTGTTCCCTTACTGGAAACCCATTATTTATAATTTTCATGGATTTGAATTGGCATCATGAAAATGGTTGGAAGAAGAACAATAAAATAATGGAATTGTTGTTTAAGTTGTTGGGCCATTAGAGAGGATGGGAATAGGATAAAGGAAGATCCACGTGACCGAGTCACGCGGGGTGGGAATACAAAACAGGAGCCGGTGTGGGTGTGGTCGCAACGAAGTCTTAAAGTGACCACGTGGAATTCATGATGTGGCGTGCGATTCTGGTAAATGCAAAATTGGGTGATATTTTTTGTGGAAAGAGAAATGGGCTTAGTCCATGTGGAATTCATGATGTGGCGTTCATCTCTTTGCCTTGACTGCTAGTTCTACCTTCAAACTTGGTGTTAGTAAATCATTCTTGTCAATTCGTTTGGATTTTTGTCTTCTAATCTTGATTCTCGTTAATGGGTTTAGACTTGAATTAAACTTTATGTTATTTGTTTATGATTCCGATTCTTATTAATGGGTTTAGAGTTGACTTTTGATCCTTATTTATGAGCTTGGAGTTGACTTGAACTTAGTTTATATGTGTTTGGATTTGGTGTTTTCAGGGTGCTGCTGCAAATGAATCCGGAGCTGGTACTGCAACAAAGAGATTAAGACGTAAGAAGGTAATTTCTTAAAGAATGTTGTTGAAAATAGATAATGGGTTTGTTGGGGTGTGGCTGTATGAGCCAAGCATTTGTTTGTTGCCGACGTTAGATGAGTTGTTGGCTTGCATTGTTCTAGAAGAATGCATGGTTGGTTCAACCACTAATTGTAACGAAGCTTGTTTTACTGTTGTTTAATGATGAAATACTCTTGTTGTTTGTTTTCCAGACATTTGCTGAACTTAAAGAAGAGGAGAGCGTGCTTTTGAATGAGAAAATTCATCTCAAAAAGGTATAATTTTAATATTGTTTTTATGGGTAGAACAACAACCTTTTTTCTTTTTTGAAAATTGGTAGAACAACAACTTTAAAGTTGTAATTTCTTTTATATATTCCGGGTCTTTTTAGCCTTTTTCTTTAATATATATATTGAATCTAACGTAGATGAAAAGTCCCACGTTGGTTAATTTAGGGAATGATCATAGGTTTATAATCGATGAATATTATCTCTATTGATATGAGGCCTTTTGGGGAAGCCCAAAAGCAAAGCTATGAGAGTTTATGTTCGAAATGGACAATATCATACCATTGTGGAGACTAGTGTTCATCTAACATTGCCTTATCTTGTTCGTGATTTTGATGACCGAACTTACTTTTTGAACAGGAACTTGCCAATCTAAGAGCTACCTTCGAAGAACAAAGAGCCAAGAATGAGAGTTTGAAGAAAATGAAGGTAAGCAATTGTCTGCTTTCTTTTTCCATGAACACCTGAACTATACTGTCTTTTTGCCTTTGTAAAGTTTCAAAAAGATTGAACAGAAAAGATTCTCGAATTTCCCTTCACCTAAAGCACTAACTTATCAAACAAAGCAATCTCTAAAACAATCTCTTGCTTGCTTGCTTTTACTTTATGAACGAACAGGTGGATTTCAACATGAAATACGCAGAAAAATTCAATACAAACTCCAAGATGATGATGATGATGCAAGAGGATTCTTCATCCACACTAACCCGTCAAAGGGAAAGCTCTAACATTGAAGCAATTCCTCCAACATTGCTGCCACTCACCGGGGCAGGTTCGGGGAGGTTCGAGGCTCAATTGCAGACGAAAATCAAATCATCAACCGAAGACGATTGCGTCTTTTTCTTACCGGATTTGAATATGACACCCTCAGAGGATTGA

mRNA sequence

ATGATGGTGAACGACGACTGGCTTACGGCGGCCATGGCCGATGATGGAGTGGTGGTCGAGTTGTTGGTGCGGTTGAAGCAATCGCAGGCTGTGTCGCCTTCCAAATCTCCGCTTCCGGTGACGGTGCCTTTCACTTGGGGGATTAGGCAGCTGAGGTCTAGAACGGCGACGACGGTTGGTAGATGTGGCGATGGTGTCTTGGTGAGGAACAATAAGGATGTTGACTCAACCAGATGGAGTCCTACGACGCCGCTTTCGTGGAGCGGTGGAGGTTCGCCTTCTGCTACGCTTGACGGTTATGAGGAGTCTAGCCGTCCGGCTACGCTCTCGCACGCTGCTTCCAGATTTAAGGGTGCTGCTGCAAATGAATCCGGAGCTGGTACTGCAACAAAGAGATTAAGACGTAAGAAGACATTTGCTGAACTTAAAGAAGAGGAGAGCGTGCTTTTGAATGAGAAAATTCATCTCAAAAAGGAACTTGCCAATCTAAGAGCTACCTTCGAAGAACAAAGAGCCAAGAATGAGAGTTTGAAGAAAATGAAGGTGGATTTCAACATGAAATACGCAGAAAAATTCAATACAAACTCCAAGATGATGATGATGATGCAAGAGGATTCTTCATCCACACTAACCCGTCAAAGGGAAAGCTCTAACATTGAAGCAATTCCTCCAACATTGCTGCCACTCACCGGGGCAGGTTCGGGGAGGTTCGAGGCTCAATTGCAGACGAAAATCAAATCATCAACCGAAGACGATTGCGTCTTTTTCTTACCGGATTTGAATATGACACCCTCAGAGGATTGA

Coding sequence (CDS)

ATGATGGTGAACGACGACTGGCTTACGGCGGCCATGGCCGATGATGGAGTGGTGGTCGAGTTGTTGGTGCGGTTGAAGCAATCGCAGGCTGTGTCGCCTTCCAAATCTCCGCTTCCGGTGACGGTGCCTTTCACTTGGGGGATTAGGCAGCTGAGGTCTAGAACGGCGACGACGGTTGGTAGATGTGGCGATGGTGTCTTGGTGAGGAACAATAAGGATGTTGACTCAACCAGATGGAGTCCTACGACGCCGCTTTCGTGGAGCGGTGGAGGTTCGCCTTCTGCTACGCTTGACGGTTATGAGGAGTCTAGCCGTCCGGCTACGCTCTCGCACGCTGCTTCCAGATTTAAGGGTGCTGCTGCAAATGAATCCGGAGCTGGTACTGCAACAAAGAGATTAAGACGTAAGAAGACATTTGCTGAACTTAAAGAAGAGGAGAGCGTGCTTTTGAATGAGAAAATTCATCTCAAAAAGGAACTTGCCAATCTAAGAGCTACCTTCGAAGAACAAAGAGCCAAGAATGAGAGTTTGAAGAAAATGAAGGTGGATTTCAACATGAAATACGCAGAAAAATTCAATACAAACTCCAAGATGATGATGATGATGCAAGAGGATTCTTCATCCACACTAACCCGTCAAAGGGAAAGCTCTAACATTGAAGCAATTCCTCCAACATTGCTGCCACTCACCGGGGCAGGTTCGGGGAGGTTCGAGGCTCAATTGCAGACGAAAATCAAATCATCAACCGAAGACGATTGCGTCTTTTTCTTACCGGATTTGAATATGACACCCTCAGAGGATTGA

Protein sequence

MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVGRCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKMKVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEAQLQTKIKSSTEDDCVFFLPDLNMTPSED
Homology
[Close]
BLAST of Csor.00g075380.m01 vs. NCBI nr
Match: KAG6608135.1 (hypothetical protein SDJN03_01477, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 509 bits (1311), Expect = 1.59e-181
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG
Sbjct: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60

Query: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120
           RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA
Sbjct: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120

Query: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180
           ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM
Sbjct: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180

Query: 181 KVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEAQ 240
           KVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEAQ
Sbjct: 181 KVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEAQ 240

Query: 241 LQTKIKSSTEDDCVFFLPDLNMTPSED 267
           LQTKIKSSTEDDCVFFLPDLNMTPSED
Sbjct: 241 LQTKIKSSTEDDCVFFLPDLNMTPSED 267

[Close]
BLAST of Csor.00g075380.m01 vs. NCBI nr
Match: XP_023523262.1 (uncharacterized protein LOC111787510 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498 bits (1282), Expect = 4.35e-177
Identity = 264/268 (98.51%), Postives = 264/268 (98.51%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG
Sbjct: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60

Query: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120
           RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA
Sbjct: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120

Query: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180
           ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM
Sbjct: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180

Query: 181 KVDFNMKYAEKFNTNSKMMMMM-QEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEA 240
           KVDFNMKYAEKFNTNSKMMMMM QEDSSSTLT QRESSNIEAIPPTLLPLTGAGSGRFEA
Sbjct: 181 KVDFNMKYAEKFNTNSKMMMMMMQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFEA 240

Query: 241 QLQTKIKSSTEDDCVFFLPDLNMTPSED 267
           Q QTK KSSTEDDCVFFLPDLNMTPSED
Sbjct: 241 QSQTKSKSSTEDDCVFFLPDLNMTPSED 268

[Close]
BLAST of Csor.00g075380.m01 vs. NCBI nr
Match: XP_022940407.1 (uncharacterized protein LOC111446021 [Cucurbita moschata])

HSP 1 Score: 489 bits (1258), Expect = 1.84e-173
Identity = 259/267 (97.00%), Postives = 260/267 (97.38%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPV VPFTWGIRQLRSRTATTVG
Sbjct: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVMVPFTWGIRQLRSRTATTVG 60

Query: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120
           RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA
Sbjct: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120

Query: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180
           ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM
Sbjct: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180

Query: 181 KVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEAQ 240
           KVDFNMKYAEKFNTNSKMM MMQEDSSSTLT QRESSNIEAIPPTLLPLTGAGSGRFEA+
Sbjct: 181 KVDFNMKYAEKFNTNSKMM-MMQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFEAE 240

Query: 241 LQTKIKSSTEDDCVFFLPDLNMTPSED 267
            Q K  SSTEDDCVFFLPDLNMTPSED
Sbjct: 241 SQKKSNSSTEDDCVFFLPDLNMTPSED 266

[Close]
BLAST of Csor.00g075380.m01 vs. NCBI nr
Match: XP_022981042.1 (uncharacterized protein LOC111480308 isoform X2 [Cucurbita maxima])

HSP 1 Score: 486 bits (1251), Expect = 2.15e-172
Identity = 258/267 (96.63%), Postives = 259/267 (97.00%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG
Sbjct: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60

Query: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120
           RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHA SRFKGAA
Sbjct: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAVSRFKGAA 120

Query: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180
           ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKN SLKKM
Sbjct: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNLSLKKM 180

Query: 181 KVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEAQ 240
           KVD NMKYAEKFNTNSKMM M+QEDSSSTLT QRESSNIEAIPPTLLPLTGAGSGRFEAQ
Sbjct: 181 KVDLNMKYAEKFNTNSKMM-MLQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFEAQ 240

Query: 241 LQTKIKSSTEDDCVFFLPDLNMTPSED 267
            Q K KSSTEDDCVFFLPDLNMTPSED
Sbjct: 241 SQKKSKSSTEDDCVFFLPDLNMTPSED 266

[Close]
BLAST of Csor.00g075380.m01 vs. NCBI nr
Match: XP_022981041.1 (uncharacterized protein LOC111480308 isoform X1 [Cucurbita maxima])

HSP 1 Score: 481 bits (1239), Expect = 1.50e-170
Identity = 258/268 (96.27%), Postives = 259/268 (96.64%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG
Sbjct: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60

Query: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFK-GA 120
           RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHA SRFK GA
Sbjct: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAVSRFKVGA 120

Query: 121 AANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKK 180
           AANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKN SLKK
Sbjct: 121 AANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNLSLKK 180

Query: 181 MKVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEA 240
           MKVD NMKYAEKFNTNSKMM M+QEDSSSTLT QRESSNIEAIPPTLLPLTGAGSGRFEA
Sbjct: 181 MKVDLNMKYAEKFNTNSKMM-MLQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFEA 240

Query: 241 QLQTKIKSSTEDDCVFFLPDLNMTPSED 267
           Q Q K KSSTEDDCVFFLPDLNMTPSED
Sbjct: 241 QSQKKSKSSTEDDCVFFLPDLNMTPSED 267

[Close]
BLAST of Csor.00g075380.m01 vs. ExPASy TrEMBL
Match: A0A6J1FJI3 (uncharacterized protein LOC111446021 OS=Cucurbita moschata OX=3662 GN=LOC111446021 PE=4 SV=1)

HSP 1 Score: 489 bits (1258), Expect = 8.92e-174
Identity = 259/267 (97.00%), Postives = 260/267 (97.38%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPV VPFTWGIRQLRSRTATTVG
Sbjct: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVMVPFTWGIRQLRSRTATTVG 60

Query: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120
           RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA
Sbjct: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120

Query: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180
           ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM
Sbjct: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180

Query: 181 KVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEAQ 240
           KVDFNMKYAEKFNTNSKMM MMQEDSSSTLT QRESSNIEAIPPTLLPLTGAGSGRFEA+
Sbjct: 181 KVDFNMKYAEKFNTNSKMM-MMQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFEAE 240

Query: 241 LQTKIKSSTEDDCVFFLPDLNMTPSED 267
            Q K  SSTEDDCVFFLPDLNMTPSED
Sbjct: 241 SQKKSNSSTEDDCVFFLPDLNMTPSED 266

[Close]
BLAST of Csor.00g075380.m01 vs. ExPASy TrEMBL
Match: A0A6J1ISW2 (uncharacterized protein LOC111480308 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480308 PE=4 SV=1)

HSP 1 Score: 486 bits (1251), Expect = 1.04e-172
Identity = 258/267 (96.63%), Postives = 259/267 (97.00%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG
Sbjct: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60

Query: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAA 120
           RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHA SRFKGAA
Sbjct: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAVSRFKGAA 120

Query: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKM 180
           ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKN SLKKM
Sbjct: 121 ANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNLSLKKM 180

Query: 181 KVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEAQ 240
           KVD NMKYAEKFNTNSKMM M+QEDSSSTLT QRESSNIEAIPPTLLPLTGAGSGRFEAQ
Sbjct: 181 KVDLNMKYAEKFNTNSKMM-MLQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFEAQ 240

Query: 241 LQTKIKSSTEDDCVFFLPDLNMTPSED 267
            Q K KSSTEDDCVFFLPDLNMTPSED
Sbjct: 241 SQKKSKSSTEDDCVFFLPDLNMTPSED 266

[Close]
BLAST of Csor.00g075380.m01 vs. ExPASy TrEMBL
Match: A0A6J1IVD4 (uncharacterized protein LOC111480308 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480308 PE=4 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 7.27e-171
Identity = 258/268 (96.27%), Postives = 259/268 (96.64%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG
Sbjct: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60

Query: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFK-GA 120
           RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHA SRFK GA
Sbjct: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAVSRFKVGA 120

Query: 121 AANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKK 180
           AANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKN SLKK
Sbjct: 121 AANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNLSLKK 180

Query: 181 MKVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEA 240
           MKVD NMKYAEKFNTNSKMM M+QEDSSSTLT QRESSNIEAIPPTLLPLTGAGSGRFEA
Sbjct: 181 MKVDLNMKYAEKFNTNSKMM-MLQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFEA 240

Query: 241 QLQTKIKSSTEDDCVFFLPDLNMTPSED 267
           Q Q K KSSTEDDCVFFLPDLNMTPSED
Sbjct: 241 QSQKKSKSSTEDDCVFFLPDLNMTPSED 267

[Close]
BLAST of Csor.00g075380.m01 vs. ExPASy TrEMBL
Match: A0A6J1IIT2 (uncharacterized protein LOC111476653 OS=Cucurbita maxima OX=3661 GN=LOC111476653 PE=4 SV=1)

HSP 1 Score: 359 bits (921), Expect = 1.80e-122
Identity = 204/271 (75.28%), Postives = 219/271 (80.81%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMV D+WLTAAMA+D VV +LLVRLKQSQA SPSKSP P+ +PF WG+RQ RSRTA  + 
Sbjct: 1   MMVEDEWLTAAMAEDSVVADLLVRLKQSQAASPSKSPRPMKLPFNWGVRQPRSRTAAAMA 60

Query: 61  ----RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRF 120
               RCGD VL RNNKDVDSTR SPTTPLSWSGG SPSATLDGYE SSR ATL H ASRF
Sbjct: 61  AVVVRCGDVVLQRNNKDVDSTRCSPTTPLSWSGGASPSATLDGYEASSRHATLLHVASRF 120

Query: 121 KGAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNES 180
           KGA ANES A T TKRLRRKKTFAELKEEE+ LL EK+HLK ELA L+A+FEEQR KNES
Sbjct: 121 KGAVANESPACTTTKRLRRKKTFAELKEEENTLLKEKLHLKMELATLQASFEEQRTKNES 180

Query: 181 LKKMKVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGR 240
           LKKMKVDFN+KY EKFNTNS    MM E+SSSTLT QRESSNIE  PPTL P TG+GS  
Sbjct: 181 LKKMKVDFNLKYPEKFNTNSN---MMYEESSSTLTHQRESSNIETSPPTL-PFTGSGSS- 240

Query: 241 FEAQLQTKIKSSTEDDCVFFLPDLNMTPSED 267
            EAQ Q K KS TE+D VF LPDLNMTPSED
Sbjct: 241 -EAQSQKKSKS-TEEDSVFLLPDLNMTPSED 264

[Close]
BLAST of Csor.00g075380.m01 vs. ExPASy TrEMBL
Match: A0A6J1FA47 (uncharacterized protein LOC111443668 OS=Cucurbita moschata OX=3662 GN=LOC111443668 PE=4 SV=1)

HSP 1 Score: 354 bits (908), Expect = 1.76e-120
Identity = 202/272 (74.26%), Postives = 220/272 (80.88%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           MMV D+WLTAAMA+D VV +LLVRLKQSQA SPSKSP P+ +PF WG+RQ RSRTA  + 
Sbjct: 1   MMVEDEWLTAAMAEDSVVADLLVRLKQSQAASPSKSPRPMKLPFNWGVRQPRSRTAAAMA 60

Query: 61  ----RCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRF 120
               RCGD VL RNNKDVDSTR SPTTPLSWSGG SPSATLDGYE SSR ATL H ASRF
Sbjct: 61  AVVLRCGDVVLERNNKDVDSTRCSPTTPLSWSGGASPSATLDGYEASSRHATLLHVASRF 120

Query: 121 KGAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNES 180
           KGA ANES AGT TKRLRRKKTFAELKEEE+ LL EK+HLK ELA L+A+FEEQR+KNES
Sbjct: 121 KGAVANESPAGTTTKRLRRKKTFAELKEEENTLLKEKLHLKMELATLQASFEEQRSKNES 180

Query: 181 LKKMKVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSN-IEAIPPTLLPLTGAGSG 240
           LKKMKVDFN+KY EKF+TNS    MM E+SSSTLT QRESSN IE  PPT+ P TG+GS 
Sbjct: 181 LKKMKVDFNLKYPEKFSTNSN---MMHEESSSTLTHQRESSNNIETSPPTI-PFTGSGSS 240

Query: 241 RFEAQLQTKIKSSTEDDCVFFLPDLNMTPSED 267
             EAQ Q K KS TE+D VF LPDLNM PSED
Sbjct: 241 --EAQSQKKSKS-TEEDSVFLLPDLNMAPSED 265

[Close]
BLAST of Csor.00g075380.m01 vs. TAIR 10
Match: AT4G32030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35
Identity = 104/268 (38.81%), Postives = 145/268 (54.10%), Query Frame = 0 

Query: 5   DDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVGRCGD 64
           DDW+  A+ DD +VVELL+RLK +  V  S +P  +  P  WGIRQ RSR++   G  G 
Sbjct: 13  DDWVAVAITDDDLVVELLLRLKHAGTV-VSDNPAVILPPLRWGIRQRRSRSSRFGG--GG 72

Query: 65  GVLVRNNKDVDSTRWSPTTPLSW-----SGGGSPSATLDGYEESSRPATLSHAASRFKGA 124
           GVLV   KDVDS R SP TPLSW     SGGGS S + DG+E++SR A+ S +       
Sbjct: 73  GVLVSLKKDVDSVRASPKTPLSWSGGSGSGGGSASPSADGFEDNSRQASCSTSTGSGSKV 132

Query: 125 AANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKK 184
                     +KRL+++K+  ELK EE++ L E++ L+KE+A+LRATF+EQ  +N+ LK+
Sbjct: 133 FPTNEITSCFSKRLKKRKSSFELKNEENLKLKERLDLEKEIASLRATFDEQNLRNQKLKR 192

Query: 185 MKVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEA 244
           +K+D N        TN K + ++++            S +E               R + 
Sbjct: 193 IKLDLNSGRV----TNKKPVDLIRK------------SQLE---------------RLQG 246

Query: 245 QLQTKIKSSTEDDCVFFLPDLNMTPSED 268
               K   S      F LPDLNM PSE+
Sbjct: 253 SKSCKTSDSQNQGSFFVLPDLNMAPSEE 246

[Close]
BLAST of Csor.00g075380.m01 vs. TAIR 10
Match: AT4G32030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24
Identity = 71/159 (44.65%), Postives = 96/159 (60.38%), Query Frame = 0 

Query: 5   DDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVGRCGD 64
           DDW+  A+ DD +VVELL+RLK +  V  S +P  +  P  WGIRQ RSR++   G  G 
Sbjct: 13  DDWVAVAITDDDLVVELLLRLKHAGTV-VSDNPAVILPPLRWGIRQRRSRSSRFGG--GG 72

Query: 65  GVLVRNNKDVDSTRWSPTTPLSW-----SGGGSPSATLDGYEESSRPATLSHAASRFKGA 124
           GVLV   KDVDS R SP TPLSW     SGGGS S + DG+E++SR A+ S +       
Sbjct: 73  GVLVSLKKDVDSVRASPKTPLSWSGGSGSGGGSASPSADGFEDNSRQASCSTSTGSGSKV 132

Query: 125 AANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKK 159
                     +KRL+++K+  ELK EE++ L E++ L+K
Sbjct: 133 FPTNEITSCFSKRLKKRKSSFELKNEENLKLKERLDLEK 168

[Close]
BLAST of Csor.00g075380.m01 vs. TAIR 10
Match: AT1G15800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-23
Identity = 78/190 (41.05%), Postives = 106/190 (55.79%), Query Frame = 0 

Query: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQAVSP-SKSPLPVTVPFTWGIRQLRSRTATTVG 61
           M   DW+  AM DD +V E L+ L  ++   P +KS     +   W +RQ R++ AT   
Sbjct: 1   MTGGDWIHEAMGDDSLVAEALICLLHAEPSLPETKSGGASDLKLKWSVRQPRTKAAT--- 60

Query: 62  RCGDGVLVRNNKDVDSTRWSPTTPLSWS-------GGGSPSATLDGYEESSRPATLSHAA 121
                  +R   D D TR SPTTPLSWS       GGG  +A +DG+EESS    LS A 
Sbjct: 61  -------LRKKGDHD-TRASPTTPLSWSGATSFSGGGGGAAAAVDGFEESSGVVKLSEAV 120

Query: 122 SRFKGAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAK 181
              +      S   +  KR R+KKT A+LKEEESVLL E+  L+ ELA ++   ++QRA+
Sbjct: 121 ---RSKITQTSVTTSPFKRSRKKKTLAQLKEEESVLLKERNGLRNELATMQDLLKQQRAR 176

Query: 182 NESLKKMKVD 184
           NESLKK++ +
Sbjct: 181 NESLKKLQAE 176

[Close]
BLAST of Csor.00g075380.m01 vs. TAIR 10
Match: AT1G80610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). )

HSP 1 Score: 101.7 bits (252), Expect = 9.5e-22
Identity = 79/200 (39.50%), Postives = 103/200 (51.50%), Query Frame = 0 

Query: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQAVS-PSKSPLPVTVPFTWGIRQLRSRTATTVG 61
           M  ++W+  AM+DD +V E L+RL+ S+  +    SPL +     W +RQ RS       
Sbjct: 1   MSGENWIRVAMSDDSMVAEALLRLRHSEPKNRVDASPLKL----KWSVRQRRS------- 60

Query: 62  RCGDGVLVRNNKDVDSTRWSPTTPLSWS------------GGGSPSATLDGYEESSRPAT 121
                      K  D TR SPTTPLSWS            G G+ + T++G EESS    
Sbjct: 61  -----------KKGDQTRASPTTPLSWSGATSLSGGGGSGGSGAGATTMEGLEESSAAVK 120

Query: 122 LSHAASRFKGAAANESGAGTAT-----KRLRRKKTFAELKEEESVLLNEKIHLKKELANL 181
            S     F+   +  S   T T     KR R+KKT AELKEEE +LL E   LK ELAN+
Sbjct: 121 PSEP---FRSKISQTSAITTTTTTTLFKRSRKKKTLAELKEEEIMLLKESNGLKNELANM 175

Query: 182 RATFEEQRAKNESLKKMKVD 184
           R   E+QRA+N +LKKMK +
Sbjct: 181 RDLLEQQRARNTALKKMKAE 175

[Close]
BLAST of Csor.00g075380.m01 vs. TAIR 10
Match: AT5G25210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 7.6e-11
Identity = 58/198 (29.29%), Postives = 84/198 (42.42%), Query Frame = 0 

Query: 1   MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVG 60
           M+ +DDW   AM D  VV ELLV+LK+++ +       P+     WGI+Q RSR      
Sbjct: 1   MVSSDDWTKCAMRDGEVVAELLVKLKEAKVIKN-----PIVTALRWGIQQPRSRCP---- 60

Query: 61  RCGDGVLVRNNKDVDSTRWSPTTPLSWSGG-----GSPSATLDGYEESSRPATLSHAASR 120
                      +    +R SP+TPLSWSGG      SPS  +DGYE +SR   +S   SR
Sbjct: 61  -----------RKESESRCSPSTPLSWSGGCGGSSSSPSGYVDGYEATSR--QISAVGSR 120

Query: 121 FKGAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNE 180
                                                     K +++LR+ F E+  +N 
Sbjct: 121 -----------------------------------------SKNISSLRSPFSERGIENN 135

Query: 181 SLKKMKVDFNMKYAEKFN 194
           +LK+MK++     A+  N
Sbjct: 181 NLKRMKMNHIQNLAKDEN 135

The following BLAST results are available for this feature:
BLAST of Csor.00g075380.m01 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g075380.m01 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6608135.11.59e-181100.00hypothetical protein SDJN03_01477, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023523262.14.35e-17798.51uncharacterized protein LOC111787510 [Cucurbita pepo subsp. pepo][more]
XP_022940407.11.84e-17397.00uncharacterized protein LOC111446021 [Cucurbita moschata][more]
XP_022981042.12.15e-17296.63uncharacterized protein LOC111480308 isoform X2 [Cucurbita maxima][more]
XP_022981041.11.50e-17096.27uncharacterized protein LOC111480308 isoform X1 [Cucurbita maxima][more]
BLAST of Csor.00g075380.m01 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FJI38.92e-17497.00uncharacterized protein LOC111446021 OS=Cucurbita moschata OX=3662 GN=LOC1114460... [more]
A0A6J1ISW21.04e-17296.63uncharacterized protein LOC111480308 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1IVD47.27e-17196.27uncharacterized protein LOC111480308 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1IIT21.80e-12275.28uncharacterized protein LOC111476653 OS=Cucurbita maxima OX=3661 GN=LOC111476653... [more]
A0A6J1FA471.76e-12074.26uncharacterized protein LOC111443668 OS=Cucurbita moschata OX=3662 GN=LOC1114436... [more]
BLAST of Csor.00g075380.m01 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G32030.11.2e-3538.81unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G32030.21.2e-2444.65unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G15800.11.0e-2341.05unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G80610.19.5e-2239.50unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G25210.17.6e-1129.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..103
NoneNo IPR availablePANTHERPTHR35099:SF2OS02G0182700 PROTEINcoord: 2..267
NoneNo IPR availablePANTHERPTHR35099OS02G0182700 PROTEINcoord: 2..267

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csor.00g075380Csor.00g075380gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g075380.m01.CDS05Csor.00g075380.m01.CDS05CDS
Csor.00g075380.m01.CDS04Csor.00g075380.m01.CDS04CDS
Csor.00g075380.m01.CDS03Csor.00g075380.m01.CDS03CDS
Csor.00g075380.m01.CDS02Csor.00g075380.m01.CDS02CDS
Csor.00g075380.m01.CDS01Csor.00g075380.m01.CDS01CDS


The following initial feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g075380.m01.initial01Csor.00g075380.m01.initial01initial


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g075380.m01.start_codon01Csor.00g075380.m01.start_codon01start_codon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g075380.m01.intron04Csor.00g075380.m01.intron04intron
Csor.00g075380.m01.intron03Csor.00g075380.m01.intron03intron
Csor.00g075380.m01.intron02Csor.00g075380.m01.intron02intron
Csor.00g075380.m01.intron01Csor.00g075380.m01.intron01intron


The following internal feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g075380.m01.internal03Csor.00g075380.m01.internal03internal
Csor.00g075380.m01.internal02Csor.00g075380.m01.internal02internal
Csor.00g075380.m01.internal01Csor.00g075380.m01.internal01internal


The following terminal feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g075380.m01.terminal01Csor.00g075380.m01.terminal01terminal


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g075380.m01.stop_codon01Csor.00g075380.m01.stop_codon01stop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csor.00g075380.m01Csor.00g075380.m01-proteinpolypeptide