Csor.00g057620.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGCCCCTATAACGAACACCCTTCAAACTCCATCAACCACCCGAGAACTCTACGCCAACTTCGGAGTGGCACGTACTTTGACAAACAAAGGTTCATGTTAATTATACGCATACCCTATGGCTACCCAGCCATGGCTAAGCCAAGTACACTCGAGATGAAAATGGTGCCATGTGCAACCAACCAGGTCTGCTTCTCTCTCAAAACTCCTTCATGAAGCTTCAAAACACCCTCCCTCACACATGCATATCATGGCAGCGCCTTTTCTTGACATTTGACAACCCCATGGCCCCTGCATTGACACGCCATGACGCTCATTGCTCAGAATCTCTGGCTCTACAGCGCCATTTGGGTGAGCATGGCTCCATAATTAGAGCGCGCTTTTAATTAAGCTTCCACTTCAAAGGCCCATTGGGCCTAAACTACAACCTGACCCATTTTGTATGGCCCATAGAGGGATTAAAAAAATTAAGTTTTAACCATTTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTTATTTTATTAATAAAAAAAAAAAACTCATGGTAACCATTTTGTTTTCCATTAAAAAAAAAAAAAAAAAAAGATTTTATTAGTCTGAATTCTAAGTGTCTCATTTTCACCATCGCCGTCGTGTTAATGGATTTTAATTGTGGCTTATTCAATTTAGGAAGTTGAGCAGTTCGAGATACGCGAAGTTCTGCGCTGTAAGTCTACGCCGTTTGCTTACTGTTCTTAAAAAATGAAAATAAAATTGGCTGAACAAATTATAAATGTTATAACATCATCGTTGGAAAATCTGTACGATATATTATTATGAGTAGTTGCTTGCATAGAATTAATCGTTCATCTGTGTTCTGTGTGATCCGATCTAGTTCGGTTTAGTGTTTTCCAATGAGTGTCAAAGTTTTGGGGCATAGAGACGTATTTATATACTATCATGTTGTGTCCCGAGAGCTCTAGTGTTCATTTTCATTTATAATGCTTTGTATGACGTGATCGAATATGCTTCGATTTCTCAGTCAACTGAGGAAAAGTTTTAATCCGCTCAGATGAGAGTGAGGAGTAAGCGTTTAGGCTTTAGTTCATCTTTTTTCTGCTTAAAGTACAAAGTACACTCAGCAAAAACTGACATGTAGTTGAGGTCACTCAGCCATTTGAGCCGGTTCCTGAAGCTTTATTGGCATCACAAAAGCTGCTGGAAGAAGGTTGCTAATAGAGTTAAATTAGTATACGAGGTGGAGCCATAGAGAAGATGGTTGGAGTCTGTTAAAATGGCTGGGGAGAGTTGTTACTAGCAAGTTTGGGTTTTTGGTTTGGTAGTTGGTTTTCTATTTTCCAATTTAGTTGTTTAATTTTGAGTTTCGTTCATTTTGGAGATGTTGAAGTTCAATGCATCATTTTTTGGATTTTTGGGCTGTTTTTCCGTGTCGGAGTTTGTTGTTTTTTCATTTGGTCGATGAAAAGTATTGTTTCAAAAACTAGCACATTGTCGTGAATAAAGGGCGTAGGCAATGAGGATGGGACATTAAAAATGTTGTACTTAGTTTGTCTTAGGTGGAGGGGAGGCGCTTGTAGGTTCCTCCAATAACCTGGAGAAATATCTTTCTACTTTGTTGGTTCAATATATTTTCATGGATTTTTTAAAATAGGAAACAAAAAGAATACCTTTAAAACGAAGAAGCTGTAAAAAACCGCCCCGGCTGATATTAATTAGAGTCTGGCTATATTTACTCAAGAGATTAGAGAACGTGCATCAACAAGAGTTGAGTAAATTTTCTCCCAACGAGTTCCGTAGTATATCATCTTATCTTGAAAAATGATATCTTCCATTTCCAACTACTATTTCCAAAGGGGGTAGAGAACTCATGCTATCTTGGTTAAAAGGAACGTTGGATGATCTGGATTTTATTCTCCAATAACTTCTGTTACATATGACCTTTTATTATTGTGTTGACCAATTGGCTTCATATCAAAGCATCATTATCAAAATTCATAGGAGATTTACTGCTAAAGTTTGACTGGTACAAATTTTGAAGAGAGTTTGATTATTCATATAGCTGATGATCTGAGAGTTCCTGATATTTTTCCTATGGTGCCTGGTGGTTGTCAAGTTTTATCCATTGTGTTATTAGGCTAGATGTCTCTACTCAGGATTTCACCCAGAACAGTTGTATAATAGCTCTGGTGTCATGTCAGTGTACGGAAGAATTGTATAGAATACAGTTGCAGAGAACAAGATAGAATACAGTACAGAAGAATTGGGTTTCCTTAAGATTTTTTAGGAAGAATCTATTTTCCTTCACTTTTTTAAGCCGAAGTTGAAATGAAATCTATTGTTTTTAATTTCCAAGATTGGCATGTTATTATGTCTGATATACTCTGTGGATATTTGGTGTGCCTTTGTTTTTTGAGTGACATGATTATATTGCCTCTTAGCATAATTTTTTCGTTTGCATTTAGCTATATTTATTGTTGAACTCAAGAAATCTTTTACGTGTGAAAAACTATTAATGTGTTTGTTTATCATATGATAATACTGCAGGCATACTACACACAATTGTATTTCATCGAGCTTTAGGTCTTGTTCGGCCCAAAGACATTGATTTGGAGCTTTTCGATATTACTTACGTAAGTCTCAACTCATTAAATGATCAGTTATTCTGTTTGGAAGTATTGTCAATATTCAGTTTTTATTTACAGTTTCTGATGGTTAGTAAAATATGAAAATTGTGCACACATCATGTTTTATATATAGTCTCATACAACCCGACAGCTTTGTGCATAATTCTTATTAAGAGAATTCCAAGAGGAGGATACAAAAATGATTCTTTCATCTCAAACATTCCCTTGTTCATCCATCTTGTGGAAGGTTCTTCTGTTTCTTTCTAACTAAATCTCCCATAGAATAACTCTAATATCATCAAGCCAAATGATCCCTTTTTTCCTTCCTTGCTCTTCCTCGACCCCTACTGTATGCCTTTATTCTTAAAGCAGTGATCTCTTATCACATTCCGATTGTTTATTTTATTTTATTTTTACTCTTTCACGTTGATCAATTTGACTTAGGCTTAATTTGATGTATTCAAATGTAATTGAGTCCCAGATTCTTCCAGTCTTATGGATCTGCATTGTCTGCATTTTTTTTTTGTTGGTGACTTGTACAATTATGTTTATTACTGTATAGGTGCAATGTGGGGATGTTGAAGTTGAGAAAAAGATAGATGAGAAGATTGAGCAGTTCATCAACTGGGTAGAGAAACACCCGAACAAGAAAAGCCAGGTTTTAAATCGATGTTGAATTTTGAGTGTCATAAGTTTCGTGTAAATGTTGTTTGGTTATTTCTTGCTTTTAACTAATTCCCCATTTTTGTGAACAGATATGTTTGTCCTTTTATCAAGAGAAAAATAAACAGGCCTCTTGGTTCACTAACAAAATTGAACGCTTTTATTGGGAACAATGGTATATCAATTTGCATGTGGCACAACACATAAAAATACATTCTGCCAAGACTCACCCACAGAAAATTCTAGTTGACCCAGAAGGTACTCTTAATTCTTGCTTTTATTATTATTCTTCTTTTTAATACTTCTGGTCTCTCAGGGATGAATTGTTTCAACCGACCTGCCCTTTATGTGCAGAGAGTGAATTGGAGGAGAGAAGCATTCGCAGGACGACACTGGAAGCTTCTCTTCGCGAGGTGTTGTTTCAAGTAATAAAATTTGTCAATGAAAAAAAGGATCATGTTCCTGCTATACCAAGTCCCGATTGTGGTGTCGTCATTTTCCCCTATGAAATAACAATTCCTAGGTGAGTTGAACTAATGAAATTAATGTCACGTCTTTGCATCTCAATTCTTTGTCATTTATATTTTGATTTAAGAAAGCTTTAAAGCTCCAGGATTATACAGTGTGCATATTATTTAATGGTATGTTTGCCGATGGCTCAGTTCATCAGATTCTGCATTTGGAATGGACATGATCAAGAGGATGCTGCAGACTGGACACCCCACCATGCTGAGCTGA ATGGCAGGCCCCTATAACGAACACCCTTCAAACTCCATCAACCACCCGAGAACTCTACGCCAACTTCGGAGTGGCACGTACTTTGACAAACAAAGGTTCATGTTAATTATACGCATACCCTATGGCTACCCAGCCATGGCTAAGCCAAGTACACTCGAGATGAAAATGGTGCCATGTGCAACCAACCAGGAAGTTGAGCAGTTCGAGATACGCGAAGTTCTGCGCTGCATACTACACACAATTGTATTTCATCGAGCTTTAGGTCTTGTTCGGCCCAAAGACATTGATTTGGAGCTTTTCGATATTACTTACGTGCAATGTGGGGATGTTGAAGTTGAGAAAAAGATAGATGAGAAGATTGAGCAGTTCATCAACTGGGTAGAGAAACACCCGAACAAGAAAAGCCAGATATGTTTGTCCTTTTATCAAGAGAAAAATAAACAGGCCTCTTGGTTCACTAACAAAATTGAACGCTTTTATTGGGAACAATGGTATATCAATTTGCATGTGGCACAACACATAAAAATACATTCTGCCAAGACTCACCCACAGAAAATTCTAGTTGACCCAGAAGAGAGTGAATTGGAGGAGAGAAGCATTCGCAGGACGACACTGGAAGCTTCTCTTCGCGAGGTGTTGTTTCAAGTAATAAAATTTGTCAATGAAAAAAAGGATCATGTTCCTGCTATACCAAGTCCCGATTGTGGTGTCGTCATTTTCCCCTATGAAATAACAATTCCTAGTTCATCAGATTCTGCATTTGGAATGGACATGATCAAGAGGATGCTGCAGACTGGACACCCCACCATGCTGAGCTGA ATGGCAGGCCCCTATAACGAACACCCTTCAAACTCCATCAACCACCCGAGAACTCTACGCCAACTTCGGAGTGGCACGTACTTTGACAAACAAAGGTTCATGTTAATTATACGCATACCCTATGGCTACCCAGCCATGGCTAAGCCAAGTACACTCGAGATGAAAATGGTGCCATGTGCAACCAACCAGGAAGTTGAGCAGTTCGAGATACGCGAAGTTCTGCGCTGCATACTACACACAATTGTATTTCATCGAGCTTTAGGTCTTGTTCGGCCCAAAGACATTGATTTGGAGCTTTTCGATATTACTTACGTGCAATGTGGGGATGTTGAAGTTGAGAAAAAGATAGATGAGAAGATTGAGCAGTTCATCAACTGGGTAGAGAAACACCCGAACAAGAAAAGCCAGATATGTTTGTCCTTTTATCAAGAGAAAAATAAACAGGCCTCTTGGTTCACTAACAAAATTGAACGCTTTTATTGGGAACAATGGTATATCAATTTGCATGTGGCACAACACATAAAAATACATTCTGCCAAGACTCACCCACAGAAAATTCTAGTTGACCCAGAAGAGAGTGAATTGGAGGAGAGAAGCATTCGCAGGACGACACTGGAAGCTTCTCTTCGCGAGGTGTTGTTTCAAGTAATAAAATTTGTCAATGAAAAAAAGGATCATGTTCCTGCTATACCAAGTCCCGATTGTGGTGTCGTCATTTTCCCCTATGAAATAACAATTCCTAGTTCATCAGATTCTGCATTTGGAATGGACATGATCAAGAGGATGCTGCAGACTGGACACCCCACCATGCTGAGCTGA MAGPYNEHPSNSINHPRTLRQLRSGTYFDKQRFMLIIRIPYGYPAMAKPSTLEMKMVPCATNQEVEQFEIREVLRCILHTIVFHRALGLVRPKDIDLELFDITYVQCGDVEVEKKIDEKIEQFINWVEKHPNKKSQICLSFYQEKNKQASWFTNKIERFYWEQWYINLHVAQHIKIHSAKTHPQKILVDPEESELEERSIRRTTLEASLREVLFQVIKFVNEKKDHVPAIPSPDCGVVIFPYEITIPSSSDSAFGMDMIKRMLQTGHPTMLS Homology
BLAST of Csor.00g057620.m01 vs. ExPASy Swiss-Prot
Match: F4K265 (Autophagy-related protein 101 OS=Arabidopsis thaliana OX=3702 GN=ATG101 PE=1 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 7.9e-85 Identity = 158/208 (75.96%), Postives = 180/208 (86.54%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. NCBI nr
Match: KAG6604199.1 (Autophagy-related protein 101, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 553 bits (1426), Expect = 6.89e-199 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. NCBI nr
Match: XP_023545159.1 (autophagy-related protein 101 [Cucurbita pepo subsp. pepo] >KAG7034361.1 Autophagy-related protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 422 bits (1084), Expect = 1.39e-147 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. NCBI nr
Match: XP_022979127.1 (autophagy-related protein 101 [Cucurbita maxima]) HSP 1 Score: 421 bits (1082), Expect = 2.80e-147 Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. NCBI nr
Match: XP_022949787.1 (autophagy-related protein 101 [Cucurbita moschata]) HSP 1 Score: 421 bits (1081), Expect = 3.98e-147 Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. NCBI nr
Match: XP_008440236.1 (PREDICTED: autophagy-related protein 101 [Cucumis melo]) HSP 1 Score: 409 bits (1051), Expect = 1.48e-142 Identity = 202/209 (96.65%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. ExPASy TrEMBL
Match: A0A6J1IMY4 (Autophagy-related protein 101 OS=Cucurbita maxima OX=3661 GN=LOC111478858 PE=3 SV=1) HSP 1 Score: 421 bits (1082), Expect = 1.36e-147 Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. ExPASy TrEMBL
Match: A0A6J1GD29 (Autophagy-related protein 101 OS=Cucurbita moschata OX=3662 GN=LOC111453078 PE=3 SV=1) HSP 1 Score: 421 bits (1081), Expect = 1.92e-147 Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. ExPASy TrEMBL
Match: A0A1S3B1D8 (Autophagy-related protein 101 OS=Cucumis melo OX=3656 GN=LOC103484751 PE=3 SV=1) HSP 1 Score: 409 bits (1051), Expect = 7.16e-143 Identity = 202/209 (96.65%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. ExPASy TrEMBL
Match: A0A0A0KJH5 (Autophagy-related protein 101 OS=Cucumis sativus OX=3659 GN=Csa_6G490120 PE=3 SV=1) HSP 1 Score: 408 bits (1048), Expect = 2.05e-142 Identity = 201/209 (96.17%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. ExPASy TrEMBL
Match: A0A6J1BU26 (Autophagy-related protein 101 OS=Momordica charantia OX=3673 GN=LOC111005695 PE=3 SV=1) HSP 1 Score: 378 bits (971), Expect = 1.06e-130 Identity = 189/209 (90.43%), Postives = 195/209 (93.30%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. TAIR 10
Match: AT5G66930.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1649 (InterPro:IPR012445); Has 247 Blast hits to 247 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 89; Fungi - 83; Plants - 58; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 315.5 bits (807), Expect = 4.3e-86 Identity = 158/209 (75.60%), Postives = 181/209 (86.60%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. TAIR 10
Match: AT5G66930.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1649 (InterPro:IPR012445); Has 251 Blast hits to 251 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 85; Plants - 58; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 315.1 bits (806), Expect = 5.6e-86 Identity = 158/208 (75.96%), Postives = 180/208 (86.54%), Query Frame = 0
BLAST of Csor.00g057620.m01 vs. TAIR 10
Match: AT5G66930.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1649 (InterPro:IPR012445); Has 236 Blast hits to 236 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 70; Plants - 56; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 211.8 bits (538), Expect = 6.7e-55 Identity = 101/127 (79.53%), Postives = 113/127 (88.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following internal feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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