Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCTGCAGGAAGAAGCCAATTATCTCAATATGTTAATAAGGATCTTCTCCATTCTAAGCAAATCCACTTGATGATGTTCCGGGAAAGAAGGAACTTCTCATTCCAAAGAATTGATTCTAAGTCTCTAGTAAGATCCCAATCTCGCTCTCGCTCTCCGAGCCAATGTCTCTTTGAAAGATCTGATAGGTTTTATGGATGTCCCGACATGACACGTCGAAGATCTCCAAATTATAGGACAGACGGGACGAGATCGCCCGATCAGCATCCTATATGTGCGCATATGACAGGCCAAAGACAAGGATTCTGTTTCCTTTCACCACTTGATGATTTGAGGGATGTTGGTCCTACACCCAACCATGGCCATATGAGATCTATCATTCCTAATAGGAATCAAACTGAAAGATTACCTCTTAGAAACAGAAGTTATGATGCTATAGATCATCAAGTAAGGATAGAGAGCAACGAGCTTTTTGATGATCCCGTACGCTCGGGTCAACTGAGCGAGTACGGTGGTGGCGAACCCGATGACAATAAAAGAAGATAA
mRNA sequence
ATGAAGGCTGCAGGAAGAAGCCAATTATCTCAATATGTTAATAAGGATCTTCTCCATTCTAAGCAAATCCACTTGATGATGTTCCGGGAAAGAAGGAACTTCTCATTCCAAAGAATTGATTCTAAGTCTCTAGTAAGATCCCAATCTCGCTCTCGCTCTCCGAGCCAATGTCTCTTTGAAAGATCTGATAGGTTTTATGGATGTCCCGACATGACACGTCGAAGATCTCCAAATTATAGGACAGACGGGACGAGATCGCCCGATCAGCATCCTATATGTGCGCATATGACAGGCCAAAGACAAGGATTCTGTTTCCTTTCACCACTTGATGATTTGAGGGATGTTGGTCCTACACCCAACCATGGCCATATGAGATCTATCATTCCTAATAGGAATCAAACTGAAAGATTACCTCTTAGAAACAGAAGTTATGATGCTATAGATCATCAAGTAAGGATAGAGAGCAACGAGCTTTTTGATGATCCCGTACGCTCGGGTCAACTGAGCGAGTACGGTGGTGGCGAACCCGATGACAATAAAAGAAGATAA
Coding sequence (CDS)
ATGAAGGCTGCAGGAAGAAGCCAATTATCTCAATATGTTAATAAGGATCTTCTCCATTCTAAGCAAATCCACTTGATGATGTTCCGGGAAAGAAGGAACTTCTCATTCCAAAGAATTGATTCTAAGTCTCTAGTAAGATCCCAATCTCGCTCTCGCTCTCCGAGCCAATGTCTCTTTGAAAGATCTGATAGGTTTTATGGATGTCCCGACATGACACGTCGAAGATCTCCAAATTATAGGACAGACGGGACGAGATCGCCCGATCAGCATCCTATATGTGCGCATATGACAGGCCAAAGACAAGGATTCTGTTTCCTTTCACCACTTGATGATTTGAGGGATGTTGGTCCTACACCCAACCATGGCCATATGAGATCTATCATTCCTAATAGGAATCAAACTGAAAGATTACCTCTTAGAAACAGAAGTTATGATGCTATAGATCATCAAGTAAGGATAGAGAGCAACGAGCTTTTTGATGATCCCGTACGCTCGGGTCAACTGAGCGAGTACGGTGGTGGCGAACCCGATGACAATAAAAGAAGATAA
Protein sequence
MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFERSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR
Homology
BLAST of Csor.00g031590.m01 vs. NCBI nr
Match:
KAG6578734.1 (hypothetical protein SDJN03_23182, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 378 bits (971), Expect = 1.61e-132
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query: 1 MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE 60
MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE
Sbjct: 1 MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE 60
Query: 61 RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPN 120
RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPN
Sbjct: 61 RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPN 120
Query: 121 HGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNK 180
HGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNK
Sbjct: 121 HGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNK 180
Query: 181 RR 182
RR
Sbjct: 181 RR 182
BLAST of Csor.00g031590.m01 vs. NCBI nr
Match:
KAG7016263.1 (hypothetical protein SDJN02_21369, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 374 bits (961), Expect = 6.37e-126
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0
Query: 1 MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE 60
MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE
Sbjct: 348 MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE 407
Query: 61 RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPN 120
RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSP DDLRDVGPTPN
Sbjct: 408 RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPFDDLRDVGPTPN 467
Query: 121 HGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNK 180
HGHMRSIIPNRNQTERLPLRNRSYDAIDHQ RIESNELFDDPVRSGQLSEYGGGEPDDNK
Sbjct: 468 HGHMRSIIPNRNQTERLPLRNRSYDAIDHQSRIESNELFDDPVRSGQLSEYGGGEPDDNK 527
Query: 181 RR 182
RR
Sbjct: 528 RR 529
BLAST of Csor.00g031590.m01 vs. NCBI nr
Match:
XP_038889581.1 (uncharacterized protein LOC120079459 isoform X2 [Benincasa hispida] >XP_038889582.1 uncharacterized protein LOC120079459 isoform X2 [Benincasa hispida])
HSP 1 Score: 214 bits (545), Expect = 8.08e-61
Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 0
Query: 28 FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
FRERRNFSFQR IDSKS VRS R+RSPSQ +RSDRF G P++T RRSPNYRT
Sbjct: 802 FRERRNFSFQRKTFPRIDSKSPVRS--RARSPSQWFSSKRSDRFCGRPELTHRRSPNYRT 861
Query: 88 DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
D RSPDQ PI ++ G+RQGF FLSP D+LRDVGP P+HG MRSIIPNRNQTERLPLRN
Sbjct: 862 DRMRSPDQRPIRGYVPGRRQGFHFLSPSDELRDVGPAPDHGPMRSIIPNRNQTERLPLRN 921
Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
RSYDAID + RIE++ELFD PVRSGQL+ Y GGE DD++RR
Sbjct: 922 RSYDAIDPRGRIENDELFDGPVRSGQLTGYNGGELDDDERR 960
BLAST of Csor.00g031590.m01 vs. NCBI nr
Match:
XP_038889579.1 (uncharacterized protein LOC120079459 isoform X1 [Benincasa hispida] >XP_038889580.1 uncharacterized protein LOC120079459 isoform X1 [Benincasa hispida])
HSP 1 Score: 214 bits (545), Expect = 8.35e-61
Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 0
Query: 28 FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
FRERRNFSFQR IDSKS VRS R+RSPSQ +RSDRF G P++T RRSPNYRT
Sbjct: 809 FRERRNFSFQRKTFPRIDSKSPVRS--RARSPSQWFSSKRSDRFCGRPELTHRRSPNYRT 868
Query: 88 DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
D RSPDQ PI ++ G+RQGF FLSP D+LRDVGP P+HG MRSIIPNRNQTERLPLRN
Sbjct: 869 DRMRSPDQRPIRGYVPGRRQGFHFLSPSDELRDVGPAPDHGPMRSIIPNRNQTERLPLRN 928
Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
RSYDAID + RIE++ELFD PVRSGQL+ Y GGE DD++RR
Sbjct: 929 RSYDAIDPRGRIENDELFDGPVRSGQLTGYNGGELDDDERR 967
BLAST of Csor.00g031590.m01 vs. NCBI nr
Match:
KAE8648528.1 (hypothetical protein Csa_023663, partial [Cucumis sativus])
HSP 1 Score: 202 bits (514), Expect = 2.39e-60
Identity = 110/161 (68.32%), Postives = 124/161 (77.02%), Query Frame = 0
Query: 28 FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
FRERRNFSFQR IDSKS VRS R+RSPSQ +RSDRF P+MT RRSPNY T
Sbjct: 175 FRERRNFSFQRKTFPKIDSKSPVRS--RARSPSQWFSSKRSDRFCERPNMTHRRSPNYMT 234
Query: 88 DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
D RSPDQ I +M GQRQGF +LSP D+LRDVGP P+HGHMR IPNRNQT+RLPLRN
Sbjct: 235 DRMRSPDQRSIRGYMPGQRQGFRYLSPPDELRDVGPAPDHGHMRPFIPNRNQTKRLPLRN 294
Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
RSYDAID + RIE++ LF PVR GQL+ Y GGEPDD++RR
Sbjct: 295 RSYDAIDPRGRIENDGLFYGPVRLGQLTGYNGGEPDDDERR 333
BLAST of Csor.00g031590.m01 vs. ExPASy TrEMBL
Match:
A0A6J1BVM7 (uncharacterized protein LOC111006120 OS=Momordica charantia OX=3673 GN=LOC111006120 PE=4 SV=1)
HSP 1 Score: 204 bits (519), Expect = 1.65e-57
Identity = 112/161 (69.57%), Postives = 123/161 (76.40%), Query Frame = 0
Query: 28 FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCL-FERSDRFYGCPDMTRRRSPNYRT 87
FRERRNFSFQR IDSKS VRS R+RSP Q +RSDRF G P MT RRSPNYRT
Sbjct: 831 FRERRNFSFQRKGFPRIDSKSPVRS--RARSPGQWFPSKRSDRFCGRPGMTHRRSPNYRT 890
Query: 88 DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTP-NHGHMRSIIPNRNQTERLPLR 147
D RSPDQ P+ HM +R GF F+SP DD+RDVGP P +HGHMRSIIPNRNQTERL LR
Sbjct: 891 DRMRSPDQRPMGGHMAARRHGFRFISPSDDMRDVGPVPPDHGHMRSIIPNRNQTERLSLR 950
Query: 148 NRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKR 181
NRSYD ID + RIES+ELFDDPVRSGQLS GG DD++R
Sbjct: 951 NRSYDGIDPRGRIESDELFDDPVRSGQLSGCSGGNHDDDER 989
BLAST of Csor.00g031590.m01 vs. ExPASy TrEMBL
Match:
A0A0A0KU39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G504130 PE=4 SV=1)
HSP 1 Score: 202 bits (514), Expect = 7.59e-57
Identity = 110/161 (68.32%), Postives = 124/161 (77.02%), Query Frame = 0
Query: 28 FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
FRERRNFSFQR IDSKS VRS R+RSPSQ +RSDRF P+MT RRSPNY T
Sbjct: 814 FRERRNFSFQRKTFPKIDSKSPVRS--RARSPSQWFSSKRSDRFCERPNMTHRRSPNYMT 873
Query: 88 DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
D RSPDQ I +M GQRQGF +LSP D+LRDVGP P+HGHMR IPNRNQT+RLPLRN
Sbjct: 874 DRMRSPDQRSIRGYMPGQRQGFRYLSPPDELRDVGPAPDHGHMRPFIPNRNQTKRLPLRN 933
Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
RSYDAID + RIE++ LF PVR GQL+ Y GGEPDD++RR
Sbjct: 934 RSYDAIDPRGRIENDGLFYGPVRLGQLTGYNGGEPDDDERR 972
BLAST of Csor.00g031590.m01 vs. ExPASy TrEMBL
Match:
A0A1S3CJH9 (uncharacterized protein LOC103501673 OS=Cucumis melo OX=3656 GN=LOC103501673 PE=4 SV=1)
HSP 1 Score: 199 bits (507), Expect = 7.80e-56
Identity = 108/161 (67.08%), Postives = 123/161 (76.40%), Query Frame = 0
Query: 28 FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
FRERRNFSFQR I+SKS VRSQ+RS PSQ +RSDRFY DMT RRSPNYR
Sbjct: 870 FRERRNFSFQRKSFPRINSKSPVRSQARS--PSQWFSSKRSDRFYERSDMTHRRSPNYRM 929
Query: 88 DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
+ R PDQ PI HM G+RQGF FLSP D+LRDVGP P+H HMRSIIP+RNQ ERLP+RN
Sbjct: 930 ERMRPPDQRPIRGHMPGRRQGFHFLSPADELRDVGPAPDHCHMRSIIPDRNQPERLPIRN 989
Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
RSYDAID + RIE++E F PVR GQL+ Y GEPDD++RR
Sbjct: 990 RSYDAIDPEGRIENDEHFYGPVRLGQLTGYNDGEPDDDERR 1028
BLAST of Csor.00g031590.m01 vs. ExPASy TrEMBL
Match:
A0A5D3C2X8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002330 PE=4 SV=1)
HSP 1 Score: 197 bits (500), Expect = 6.97e-55
Identity = 107/161 (66.46%), Postives = 122/161 (75.78%), Query Frame = 0
Query: 28 FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
FRERRNFSFQR I+SKS VRSQ+RS PSQ +RSDRFY DMT RRSPNYR
Sbjct: 870 FRERRNFSFQRKSFPRINSKSPVRSQARS--PSQWFSSKRSDRFYERSDMTHRRSPNYRM 929
Query: 88 DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
+ R PDQ PI HM G+RQGF FLSP D+LRDVGP P+H HMRSIIP+RNQ ERLP+RN
Sbjct: 930 ERMRPPDQRPIRGHMPGRRQGFHFLSPADELRDVGPAPDHCHMRSIIPDRNQPERLPIRN 989
Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
RSYDAI + RIE++E F PVR GQL+ Y GEPDD++RR
Sbjct: 990 RSYDAIGPEGRIENDEHFYGPVRLGQLTGYNDGEPDDDERR 1028
BLAST of Csor.00g031590.m01 vs. ExPASy TrEMBL
Match:
A0A5D3C339 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002390 PE=4 SV=1)
HSP 1 Score: 196 bits (498), Expect = 1.35e-54
Identity = 108/161 (67.08%), Postives = 122/161 (75.78%), Query Frame = 0
Query: 28 FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
FRERRNFSFQR IDSKS VRS R+RSPSQ +RSDRF P+MT RRSPNY T
Sbjct: 798 FRERRNFSFQRKTFPKIDSKSPVRS--RARSPSQWFSSKRSDRFCERPNMTHRRSPNYMT 857
Query: 88 DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
D RSPDQ I +M GQRQGF +LSP D+LRDVG P+HGHMR IPNRNQT+RLPLRN
Sbjct: 858 DRMRSPDQCSIRGYMPGQRQGFRYLSPPDELRDVGSAPDHGHMRPFIPNRNQTKRLPLRN 917
Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
RSYDAID + RIE + LF PVR GQL+ Y GG+PDD++RR
Sbjct: 918 RSYDAIDPRGRIEDDGLFYGPVRLGQLTGYNGGKPDDDERR 956
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6578734.1 | 1.61e-132 | 100.00 | hypothetical protein SDJN03_23182, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7016263.1 | 6.37e-126 | 98.90 | hypothetical protein SDJN02_21369, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_038889581.1 | 8.08e-61 | 71.43 | uncharacterized protein LOC120079459 isoform X2 [Benincasa hispida] >XP_03888958... | [more] |
XP_038889579.1 | 8.35e-61 | 71.43 | uncharacterized protein LOC120079459 isoform X1 [Benincasa hispida] >XP_03888958... | [more] |
KAE8648528.1 | 2.39e-60 | 68.32 | hypothetical protein Csa_023663, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BVM7 | 1.65e-57 | 69.57 | uncharacterized protein LOC111006120 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
A0A0A0KU39 | 7.59e-57 | 68.32 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G504130 PE=4 SV=1 | [more] |
A0A1S3CJH9 | 7.80e-56 | 67.08 | uncharacterized protein LOC103501673 OS=Cucumis melo OX=3656 GN=LOC103501673 PE=... | [more] |
A0A5D3C2X8 | 6.97e-55 | 66.46 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3C339 | 1.35e-54 | 67.08 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g031590.m01.CDS01 | Csor.00g031590.m01.CDS01 | CDS |
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g031590.m01.start_codon01 | Csor.00g031590.m01.start_codon01 | start_codon |
The following single feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g031590.m01.single01 | Csor.00g031590.m01.single01 | single |
The following stop_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g031590.m01.stop_codon01 | Csor.00g031590.m01.stop_codon01 | stop_codon |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Csor.00g031590.m01 | Csor.00g031590.m01-protein | polypeptide |