Csor.00g031590 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g031590
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPCI domain-containing protein
LocationCsor_Chr15: 1953019 .. 1953567 (+)
RNA-Seq ExpressionCsor.00g031590
SyntenyCsor.00g031590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCTGCAGGAAGAAGCCAATTATCTCAATATGTTAATAAGGATCTTCTCCATTCTAAGCAAATCCACTTGATGATGTTCCGGGAAAGAAGGAACTTCTCATTCCAAAGAATTGATTCTAAGTCTCTAGTAAGATCCCAATCTCGCTCTCGCTCTCCGAGCCAATGTCTCTTTGAAAGATCTGATAGGTTTTATGGATGTCCCGACATGACACGTCGAAGATCTCCAAATTATAGGACAGACGGGACGAGATCGCCCGATCAGCATCCTATATGTGCGCATATGACAGGCCAAAGACAAGGATTCTGTTTCCTTTCACCACTTGATGATTTGAGGGATGTTGGTCCTACACCCAACCATGGCCATATGAGATCTATCATTCCTAATAGGAATCAAACTGAAAGATTACCTCTTAGAAACAGAAGTTATGATGCTATAGATCATCAAGTAAGGATAGAGAGCAACGAGCTTTTTGATGATCCCGTACGCTCGGGTCAACTGAGCGAGTACGGTGGTGGCGAACCCGATGACAATAAAAGAAGATAA

mRNA sequence

ATGAAGGCTGCAGGAAGAAGCCAATTATCTCAATATGTTAATAAGGATCTTCTCCATTCTAAGCAAATCCACTTGATGATGTTCCGGGAAAGAAGGAACTTCTCATTCCAAAGAATTGATTCTAAGTCTCTAGTAAGATCCCAATCTCGCTCTCGCTCTCCGAGCCAATGTCTCTTTGAAAGATCTGATAGGTTTTATGGATGTCCCGACATGACACGTCGAAGATCTCCAAATTATAGGACAGACGGGACGAGATCGCCCGATCAGCATCCTATATGTGCGCATATGACAGGCCAAAGACAAGGATTCTGTTTCCTTTCACCACTTGATGATTTGAGGGATGTTGGTCCTACACCCAACCATGGCCATATGAGATCTATCATTCCTAATAGGAATCAAACTGAAAGATTACCTCTTAGAAACAGAAGTTATGATGCTATAGATCATCAAGTAAGGATAGAGAGCAACGAGCTTTTTGATGATCCCGTACGCTCGGGTCAACTGAGCGAGTACGGTGGTGGCGAACCCGATGACAATAAAAGAAGATAA

Coding sequence (CDS)

ATGAAGGCTGCAGGAAGAAGCCAATTATCTCAATATGTTAATAAGGATCTTCTCCATTCTAAGCAAATCCACTTGATGATGTTCCGGGAAAGAAGGAACTTCTCATTCCAAAGAATTGATTCTAAGTCTCTAGTAAGATCCCAATCTCGCTCTCGCTCTCCGAGCCAATGTCTCTTTGAAAGATCTGATAGGTTTTATGGATGTCCCGACATGACACGTCGAAGATCTCCAAATTATAGGACAGACGGGACGAGATCGCCCGATCAGCATCCTATATGTGCGCATATGACAGGCCAAAGACAAGGATTCTGTTTCCTTTCACCACTTGATGATTTGAGGGATGTTGGTCCTACACCCAACCATGGCCATATGAGATCTATCATTCCTAATAGGAATCAAACTGAAAGATTACCTCTTAGAAACAGAAGTTATGATGCTATAGATCATCAAGTAAGGATAGAGAGCAACGAGCTTTTTGATGATCCCGTACGCTCGGGTCAACTGAGCGAGTACGGTGGTGGCGAACCCGATGACAATAAAAGAAGATAA

Protein sequence

MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFERSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR
Homology
BLAST of Csor.00g031590 vs. NCBI nr
Match: KAG6578734.1 (hypothetical protein SDJN03_23182, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378 bits (971), Expect = 1.61e-132
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE 60
           MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE
Sbjct: 1   MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE 60

Query: 61  RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPN 120
           RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPN
Sbjct: 61  RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPN 120

Query: 121 HGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNK 180
           HGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNK
Sbjct: 121 HGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNK 180

Query: 181 RR 182
           RR
Sbjct: 181 RR 182

BLAST of Csor.00g031590 vs. NCBI nr
Match: KAG7016263.1 (hypothetical protein SDJN02_21369, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374 bits (961), Expect = 6.37e-126
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0

Query: 1   MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE 60
           MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE
Sbjct: 348 MKAAGRSQLSQYVNKDLLHSKQIHLMMFRERRNFSFQRIDSKSLVRSQSRSRSPSQCLFE 407

Query: 61  RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPN 120
           RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSP DDLRDVGPTPN
Sbjct: 408 RSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMTGQRQGFCFLSPFDDLRDVGPTPN 467

Query: 121 HGHMRSIIPNRNQTERLPLRNRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNK 180
           HGHMRSIIPNRNQTERLPLRNRSYDAIDHQ RIESNELFDDPVRSGQLSEYGGGEPDDNK
Sbjct: 468 HGHMRSIIPNRNQTERLPLRNRSYDAIDHQSRIESNELFDDPVRSGQLSEYGGGEPDDNK 527

Query: 181 RR 182
           RR
Sbjct: 528 RR 529

BLAST of Csor.00g031590 vs. NCBI nr
Match: XP_038889581.1 (uncharacterized protein LOC120079459 isoform X2 [Benincasa hispida] >XP_038889582.1 uncharacterized protein LOC120079459 isoform X2 [Benincasa hispida])

HSP 1 Score: 214 bits (545), Expect = 8.08e-61
Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 0

Query: 28  FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
           FRERRNFSFQR     IDSKS VRS  R+RSPSQ    +RSDRF G P++T RRSPNYRT
Sbjct: 802 FRERRNFSFQRKTFPRIDSKSPVRS--RARSPSQWFSSKRSDRFCGRPELTHRRSPNYRT 861

Query: 88  DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
           D  RSPDQ PI  ++ G+RQGF FLSP D+LRDVGP P+HG MRSIIPNRNQTERLPLRN
Sbjct: 862 DRMRSPDQRPIRGYVPGRRQGFHFLSPSDELRDVGPAPDHGPMRSIIPNRNQTERLPLRN 921

Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
           RSYDAID + RIE++ELFD PVRSGQL+ Y GGE DD++RR
Sbjct: 922 RSYDAIDPRGRIENDELFDGPVRSGQLTGYNGGELDDDERR 960

BLAST of Csor.00g031590 vs. NCBI nr
Match: XP_038889579.1 (uncharacterized protein LOC120079459 isoform X1 [Benincasa hispida] >XP_038889580.1 uncharacterized protein LOC120079459 isoform X1 [Benincasa hispida])

HSP 1 Score: 214 bits (545), Expect = 8.35e-61
Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 0

Query: 28  FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
           FRERRNFSFQR     IDSKS VRS  R+RSPSQ    +RSDRF G P++T RRSPNYRT
Sbjct: 809 FRERRNFSFQRKTFPRIDSKSPVRS--RARSPSQWFSSKRSDRFCGRPELTHRRSPNYRT 868

Query: 88  DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
           D  RSPDQ PI  ++ G+RQGF FLSP D+LRDVGP P+HG MRSIIPNRNQTERLPLRN
Sbjct: 869 DRMRSPDQRPIRGYVPGRRQGFHFLSPSDELRDVGPAPDHGPMRSIIPNRNQTERLPLRN 928

Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
           RSYDAID + RIE++ELFD PVRSGQL+ Y GGE DD++RR
Sbjct: 929 RSYDAIDPRGRIENDELFDGPVRSGQLTGYNGGELDDDERR 967

BLAST of Csor.00g031590 vs. NCBI nr
Match: KAE8648528.1 (hypothetical protein Csa_023663, partial [Cucumis sativus])

HSP 1 Score: 202 bits (514), Expect = 2.39e-60
Identity = 110/161 (68.32%), Postives = 124/161 (77.02%), Query Frame = 0

Query: 28  FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
           FRERRNFSFQR     IDSKS VRS  R+RSPSQ    +RSDRF   P+MT RRSPNY T
Sbjct: 175 FRERRNFSFQRKTFPKIDSKSPVRS--RARSPSQWFSSKRSDRFCERPNMTHRRSPNYMT 234

Query: 88  DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
           D  RSPDQ  I  +M GQRQGF +LSP D+LRDVGP P+HGHMR  IPNRNQT+RLPLRN
Sbjct: 235 DRMRSPDQRSIRGYMPGQRQGFRYLSPPDELRDVGPAPDHGHMRPFIPNRNQTKRLPLRN 294

Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
           RSYDAID + RIE++ LF  PVR GQL+ Y GGEPDD++RR
Sbjct: 295 RSYDAIDPRGRIENDGLFYGPVRLGQLTGYNGGEPDDDERR 333

BLAST of Csor.00g031590 vs. ExPASy TrEMBL
Match: A0A6J1BVM7 (uncharacterized protein LOC111006120 OS=Momordica charantia OX=3673 GN=LOC111006120 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 1.65e-57
Identity = 112/161 (69.57%), Postives = 123/161 (76.40%), Query Frame = 0

Query: 28  FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCL-FERSDRFYGCPDMTRRRSPNYRT 87
           FRERRNFSFQR     IDSKS VRS  R+RSP Q    +RSDRF G P MT RRSPNYRT
Sbjct: 831 FRERRNFSFQRKGFPRIDSKSPVRS--RARSPGQWFPSKRSDRFCGRPGMTHRRSPNYRT 890

Query: 88  DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTP-NHGHMRSIIPNRNQTERLPLR 147
           D  RSPDQ P+  HM  +R GF F+SP DD+RDVGP P +HGHMRSIIPNRNQTERL LR
Sbjct: 891 DRMRSPDQRPMGGHMAARRHGFRFISPSDDMRDVGPVPPDHGHMRSIIPNRNQTERLSLR 950

Query: 148 NRSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKR 181
           NRSYD ID + RIES+ELFDDPVRSGQLS   GG  DD++R
Sbjct: 951 NRSYDGIDPRGRIESDELFDDPVRSGQLSGCSGGNHDDDER 989

BLAST of Csor.00g031590 vs. ExPASy TrEMBL
Match: A0A0A0KU39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G504130 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 7.59e-57
Identity = 110/161 (68.32%), Postives = 124/161 (77.02%), Query Frame = 0

Query: 28  FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
           FRERRNFSFQR     IDSKS VRS  R+RSPSQ    +RSDRF   P+MT RRSPNY T
Sbjct: 814 FRERRNFSFQRKTFPKIDSKSPVRS--RARSPSQWFSSKRSDRFCERPNMTHRRSPNYMT 873

Query: 88  DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
           D  RSPDQ  I  +M GQRQGF +LSP D+LRDVGP P+HGHMR  IPNRNQT+RLPLRN
Sbjct: 874 DRMRSPDQRSIRGYMPGQRQGFRYLSPPDELRDVGPAPDHGHMRPFIPNRNQTKRLPLRN 933

Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
           RSYDAID + RIE++ LF  PVR GQL+ Y GGEPDD++RR
Sbjct: 934 RSYDAIDPRGRIENDGLFYGPVRLGQLTGYNGGEPDDDERR 972

BLAST of Csor.00g031590 vs. ExPASy TrEMBL
Match: A0A1S3CJH9 (uncharacterized protein LOC103501673 OS=Cucumis melo OX=3656 GN=LOC103501673 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 7.80e-56
Identity = 108/161 (67.08%), Postives = 123/161 (76.40%), Query Frame = 0

Query: 28   FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
            FRERRNFSFQR     I+SKS VRSQ+RS  PSQ    +RSDRFY   DMT RRSPNYR 
Sbjct: 870  FRERRNFSFQRKSFPRINSKSPVRSQARS--PSQWFSSKRSDRFYERSDMTHRRSPNYRM 929

Query: 88   DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
            +  R PDQ PI  HM G+RQGF FLSP D+LRDVGP P+H HMRSIIP+RNQ ERLP+RN
Sbjct: 930  ERMRPPDQRPIRGHMPGRRQGFHFLSPADELRDVGPAPDHCHMRSIIPDRNQPERLPIRN 989

Query: 148  RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
            RSYDAID + RIE++E F  PVR GQL+ Y  GEPDD++RR
Sbjct: 990  RSYDAIDPEGRIENDEHFYGPVRLGQLTGYNDGEPDDDERR 1028

BLAST of Csor.00g031590 vs. ExPASy TrEMBL
Match: A0A5D3C2X8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002330 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 6.97e-55
Identity = 107/161 (66.46%), Postives = 122/161 (75.78%), Query Frame = 0

Query: 28   FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
            FRERRNFSFQR     I+SKS VRSQ+RS  PSQ    +RSDRFY   DMT RRSPNYR 
Sbjct: 870  FRERRNFSFQRKSFPRINSKSPVRSQARS--PSQWFSSKRSDRFYERSDMTHRRSPNYRM 929

Query: 88   DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
            +  R PDQ PI  HM G+RQGF FLSP D+LRDVGP P+H HMRSIIP+RNQ ERLP+RN
Sbjct: 930  ERMRPPDQRPIRGHMPGRRQGFHFLSPADELRDVGPAPDHCHMRSIIPDRNQPERLPIRN 989

Query: 148  RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
            RSYDAI  + RIE++E F  PVR GQL+ Y  GEPDD++RR
Sbjct: 990  RSYDAIGPEGRIENDEHFYGPVRLGQLTGYNDGEPDDDERR 1028

BLAST of Csor.00g031590 vs. ExPASy TrEMBL
Match: A0A5D3C339 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002390 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 1.35e-54
Identity = 108/161 (67.08%), Postives = 122/161 (75.78%), Query Frame = 0

Query: 28  FRERRNFSFQR-----IDSKSLVRSQSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRT 87
           FRERRNFSFQR     IDSKS VRS  R+RSPSQ    +RSDRF   P+MT RRSPNY T
Sbjct: 798 FRERRNFSFQRKTFPKIDSKSPVRS--RARSPSQWFSSKRSDRFCERPNMTHRRSPNYMT 857

Query: 88  DGTRSPDQHPICAHMTGQRQGFCFLSPLDDLRDVGPTPNHGHMRSIIPNRNQTERLPLRN 147
           D  RSPDQ  I  +M GQRQGF +LSP D+LRDVG  P+HGHMR  IPNRNQT+RLPLRN
Sbjct: 858 DRMRSPDQCSIRGYMPGQRQGFRYLSPPDELRDVGSAPDHGHMRPFIPNRNQTKRLPLRN 917

Query: 148 RSYDAIDHQVRIESNELFDDPVRSGQLSEYGGGEPDDNKRR 182
           RSYDAID + RIE + LF  PVR GQL+ Y GG+PDD++RR
Sbjct: 918 RSYDAIDPRGRIEDDGLFYGPVRLGQLTGYNGGKPDDDERR 956

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6578734.11.61e-132100.00hypothetical protein SDJN03_23182, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7016263.16.37e-12698.90hypothetical protein SDJN02_21369, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038889581.18.08e-6171.43uncharacterized protein LOC120079459 isoform X2 [Benincasa hispida] >XP_03888958... [more]
XP_038889579.18.35e-6171.43uncharacterized protein LOC120079459 isoform X1 [Benincasa hispida] >XP_03888958... [more]
KAE8648528.12.39e-6068.32hypothetical protein Csa_023663, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1BVM71.65e-5769.57uncharacterized protein LOC111006120 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A0A0KU397.59e-5768.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G504130 PE=4 SV=1[more]
A0A1S3CJH97.80e-5667.08uncharacterized protein LOC103501673 OS=Cucumis melo OX=3656 GN=LOC103501673 PE=... [more]
A0A5D3C2X86.97e-5566.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C3391.35e-5467.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..88
NoneNo IPR availablePANTHERPTHR34536DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEINcoord: 28..182
NoneNo IPR availablePANTHERPTHR34536:SF4BNAC09G43500D PROTEINcoord: 28..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g031590.m01Csor.00g031590.m01mRNA