CsaV3_7G018580.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGACTGGATGATGAACAACTGAACTACAAACACGTTAAGCATGGCACCAACAAACTAATTATGGAAATAGACAAATCGAGTGAGGCAGGCGAGATCAAAGTACCAGCCCAATATGCGAGCCAAGTGTTGAAGTTTCTTGATGAGTTGGGAGCAAGAGATAAGAAAAAGAAAGCAGAAGAGGATAAGTAG ATGCGACTGGATGATGAACAACTGAACTACAAACACGTTAAGCATGGCACCAACAAACTAATTATGGAAATAGACAAATCGAGTGAGGCAGGCGAGATCAAAGTACCAGCCCAATATGCGAGCCAAGTGTTGAAGTTTCTTGATGAGTTGGGAGCAAGAGATAAGAAAAAGAAAGCAGAAGAGGATAAGTAG ATGCGACTGGATGATGAACAACTGAACTACAAACACGTTAAGCATGGCACCAACAAACTAATTATGGAAATAGACAAATCGAGTGAGGCAGGCGAGATCAAAGTACCAGCCCAATATGCGAGCCAAGTGTTGAAGTTTCTTGATGAGTTGGGAGCAAGAGATAAGAAAAAGAAAGCAGAAGAGGATAAGTAG MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAEEDK* Homology
BLAST of CsaV3_7G018580.1 vs. NCBI nr
Match: KAE8645984.1 (hypothetical protein Csa_015479 [Cucumis sativus]) HSP 1 Score: 125.2 bits (313), Expect = 2.1e-25 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of CsaV3_7G018580.1 vs. NCBI nr
Match: KAA0045335.1 (stress response protein NST1-like [Cucumis melo var. makuwa]) HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04 Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of CsaV3_7G018580.1 vs. NCBI nr
Match: KGN66638.1 (hypothetical protein Csa_007234 [Cucumis sativus]) HSP 1 Score: 55.1 bits (131), Expect = 2.6e-04 Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of CsaV3_7G018580.1 vs. ExPASy TrEMBL
Match: A0A0A0LBC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769640 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of CsaV3_7G018580.1 vs. ExPASy TrEMBL
Match: A0A0A0KJ65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003650 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.6e-07 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of CsaV3_7G018580.1 vs. ExPASy TrEMBL
Match: A0A5A7TVC2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001110 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 9.8e-05 Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of CsaV3_7G018580.1 vs. ExPASy TrEMBL
Match: A0A0A0LXZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652210 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-04 Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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