CsaV3_7G018580 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G018580
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionStress response protein NST1-like
Locationchr7: 8506149 .. 8506340 (+)
RNA-Seq ExpressionCsaV3_7G018580
SyntenyCsaV3_7G018580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGACTGGATGATGAACAACTGAACTACAAACACGTTAAGCATGGCACCAACAAACTAATTATGGAAATAGACAAATCGAGTGAGGCAGGCGAGATCAAAGTACCAGCCCAATATGCGAGCCAAGTGTTGAAGTTTCTTGATGAGTTGGGAGCAAGAGATAAGAAAAAGAAAGCAGAAGAGGATAAGTAG

mRNA sequence

ATGCGACTGGATGATGAACAACTGAACTACAAACACGTTAAGCATGGCACCAACAAACTAATTATGGAAATAGACAAATCGAGTGAGGCAGGCGAGATCAAAGTACCAGCCCAATATGCGAGCCAAGTGTTGAAGTTTCTTGATGAGTTGGGAGCAAGAGATAAGAAAAAGAAAGCAGAAGAGGATAAGTAG

Coding sequence (CDS)

ATGCGACTGGATGATGAACAACTGAACTACAAACACGTTAAGCATGGCACCAACAAACTAATTATGGAAATAGACAAATCGAGTGAGGCAGGCGAGATCAAAGTACCAGCCCAATATGCGAGCCAAGTGTTGAAGTTTCTTGATGAGTTGGGAGCAAGAGATAAGAAAAAGAAAGCAGAAGAGGATAAGTAG

Protein sequence

MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAEEDK*
Homology
[Close]
BLAST of CsaV3_7G018580 vs. NCBI nr
Match: KAE8645984.1 (hypothetical protein Csa_015479 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 2.1e-25
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE 60
          MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE
Sbjct: 1  MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE 60

Query: 61 EDK 64
          EDK
Sbjct: 61 EDK 63

[Close]
BLAST of CsaV3_7G018580 vs. NCBI nr
Match: KAA0045335.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 1  MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE 60
          MRLDD Q  YKH+KHG +K ++   + SE   I+VP+++++QV+K+L++L   +KKK  E
Sbjct: 4  MRLDDNQPKYKHLKHGASKDLVGSGEVSEKEGIQVPSKFSNQVMKYLEKLKMVEKKKIEE 63

[Close]
BLAST of CsaV3_7G018580 vs. NCBI nr
Match: KGN66638.1 (hypothetical protein Csa_007234 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-04
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0 

Query: 1  MRLDD-EQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKA 60
          +RLDD     YKH+KH  +K+ + +   SE  EIKVP +Y+ +V KF+ EL   +KKKK 
Sbjct: 21 IRLDDGVPPKYKHMKHYASKIDLRVGGPSEKEEIKVPTKYSDKVKKFIKELEVEEKKKKE 80

Query: 61 EEDK 64
          EE K
Sbjct: 81 EERK 84

[Close]
BLAST of CsaV3_7G018580 vs. ExPASy TrEMBL
Match: A0A0A0LBC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769640 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE 60
          MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE
Sbjct: 1  MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE 60

Query: 61 EDK 64
          EDK
Sbjct: 61 EDK 63

[Close]
BLAST of CsaV3_7G018580 vs. ExPASy TrEMBL
Match: A0A0A0KJ65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003650 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-07
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 0 

Query: 1  MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE 60
          M+LDD+  +YKHVKHGT+K+I+   +SSE G          QVLKFLDELGA D+KKK E
Sbjct: 1  MQLDDDYTSYKHVKHGTDKVILGKGESSETG----------QVLKFLDELGAGDRKKKVE 51

Query: 61 E 62
          E
Sbjct: 61 E 51

[Close]
BLAST of CsaV3_7G018580 vs. ExPASy TrEMBL
Match: A0A5A7TVC2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001110 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.8e-05
Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 1  MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE 60
          MRLDD Q  YKH+KHG +K ++   + SE   I+VP+++++QV+K+L++L   +KKK  E
Sbjct: 4  MRLDDNQPKYKHLKHGASKDLVGSGEVSEKEGIQVPSKFSNQVMKYLEKLKMVEKKKIEE 63

[Close]
BLAST of CsaV3_7G018580 vs. ExPASy TrEMBL
Match: A0A0A0LXZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652210 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-04
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0 

Query: 1  MRLDD-EQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKA 60
          +RLDD     YKH+KH  +K+ + +   SE  EIKVP +Y+ +V KF+ EL   +KKKK 
Sbjct: 21 IRLDDGVPPKYKHMKHYASKIDLRVGGPSEKEEIKVPTKYSDKVKKFIKELEVEEKKKKE 80

Query: 61 EEDK 64
          EE K
Sbjct: 81 EERK 84

The following BLAST results are available for this feature:
BLAST of CsaV3_7G018580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645984.12.1e-25100.00hypothetical protein Csa_015479 [Cucumis sativus][more]
KAA0045335.12.0e-0445.00stress response protein NST1-like [Cucumis melo var. makuwa][more]
KGN66638.12.6e-0446.88hypothetical protein Csa_007234 [Cucumis sativus][more]
BLAST of CsaV3_7G018580 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G018580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBC41.0e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769640 PE=4 SV=1[more]
A0A0A0KJ651.6e-0757.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003650 PE=4 SV=1[more]
A0A5A7TVC29.8e-0545.00Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A0A0LXZ81.3e-0446.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652210 PE=4 SV=1[more]
BLAST of CsaV3_7G018580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G018580.1CsaV3_7G018580.1mRNA