CsaV3_7G011540.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGCACCCTTTAACTAGACAAGCCCATTAAGATCGAAAAGGGATTACTACCCTTTAAGGACCCACTACTTGACTTCCTCTACGACCCAATCAAGGCATTCAAATGGAAAAAGTTCTTTGTCAGTGAGACACAAATTCGATTAGATCTGGTGGATATGTTCTATGCAGCAAAGTTTCACCCTCAAGAATCATACGTCGTAGTGAAAGGAGAGAAAGTTCCCTTCATCGTGGAATCGATTAACGAGTTATATGATTTTCCCAATGATCCTAACGCATATCTCGGCTAA CTAGACAAGCCCATTAAGATCGAAAAGGGATTACTACCCTTTAAGGACCCACTACTTGACTTCCTCTACGACCCAATCAAGGCATTCAAATGGAAAAAGTTCTTTGTCAGTGAGACACAAATTCGATTAGATCTGGTGGATATGTTCTATGCAGCAAAGTTTCACCCTCAAGAATCATACGTCGTAGTGAAAGGAGAGAAAGTTCCCTTCATCGTGGAATCGATTAACGAGTTATATGATTTTCCCAATGATCCTAACGCATATCTCGGCTAA CTAGACAAGCCCATTAAGATCGAAAAGGGATTACTACCCTTTAAGGACCCACTACTTGACTTCCTCTACGACCCAATCAAGGCATTCAAATGGAAAAAGTTCTTTGTCAGTGAGACACAAATTCGATTAGATCTGGTGGATATGTTCTATGCAGCAAAGTTTCACCCTCAAGAATCATACGTCGTAGTGAAAGGAGAGAAAGTTCCCTTCATCGTGGAATCGATTAACGAGTTATATGATTTTCCCAATGATCCTAACGCATATCTCGGCTAA LDKPIKIEKGLLPFKDPLLDFLYDPIKAFKWKKFFVSETQIRLDLVDMFYAAKFHPQESYVVVKGEKVPFIVESINELYDFPNDPNAYLG* Homology
BLAST of CsaV3_7G011540.1 vs. NCBI nr
Match: KAE8645907.1 (hypothetical protein Csa_023734, partial [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 7.5e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of CsaV3_7G011540.1 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa]) HSP 1 Score: 126.7 bits (317), Expect = 1.0e-25 Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of CsaV3_7G011540.1 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa]) HSP 1 Score: 126.7 bits (317), Expect = 1.0e-25 Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of CsaV3_7G011540.1 vs. NCBI nr
Match: KAA0056424.1 (hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa]) HSP 1 Score: 110.5 bits (275), Expect = 7.5e-21 Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of CsaV3_7G011540.1 vs. NCBI nr
Match: KGN64973.1 (hypothetical protein Csa_022771 [Cucumis sativus]) HSP 1 Score: 101.3 bits (251), Expect = 4.6e-18 Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0
BLAST of CsaV3_7G011540.1 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.9e-26 Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of CsaV3_7G011540.1 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.9e-26 Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of CsaV3_7G011540.1 vs. ExPASy TrEMBL
Match: A0A5A7UMK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001800 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21 Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of CsaV3_7G011540.1 vs. ExPASy TrEMBL
Match: A0A0A0LT82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169970 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.2e-18 Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0
BLAST of CsaV3_7G011540.1 vs. ExPASy TrEMBL
Match: A0A5A7VMD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00650 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.4e-17 Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|