CsaV3_7G011410.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCAAAAGGTTCATTAAATTTGGGTTGAGTCATGCCAAAGGTCTTAATTCAATTAGATGTCCATGTTTGAATTGCGACAATCGTTTACTTAAGGATGTCTCAACAGTTCGATACCATTTGTATGCCAATGGAATTGATAAGAGTTACAAGGTATGGTTCTGGCATGGTGAAGAATTGAACTCAGATAACGTTACCAACACGATGGAAAATACAGTGGATGAAACTAATGAAAACGACGATTTATTTAATACAATTAATATG ATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCAAAAGGTTCATTAAATTTGGGTTGAGTCATGCCAAAGGTCTTAATTCAATTAGATGTCCATGTTTGAATTGCGACAATCGTTTACTTAAGGATGTCTCAACAGTTCGATACCATTTGTATGCCAATGGAATTGATAAGAGTTACAAGGTATGGTTCTGGCATGGTGAAGAATTGAACTCAGATAACGTTACCAACACGATGGAAAATACAGTGGATGAAACTAATGAAAACGACGATTTATTTAATACAATTAATATG ATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCAAAAGGTTCATTAAATTTGGGTTGAGTCATGCCAAAGGTCTTAATTCAATTAGATGTCCATGTTTGAATTGCGACAATCGTTTACTTAAGGATGTCTCAACAGTTCGATACCATTTGTATGCCAATGGAATTGATAAGAGTTACAAGGTATGGTTCTGGCATGGTGAAGAATTGAACTCAGATAACGTTACCAACACGATGGAAAATACAGTGGATGAAACTAATGAAAACGACGATTTATTTAATACAATTAATATG MDKSWMTQNRMSREYDLGVKRFIKFGLSHAKGLNSIRCPCLNCDNRLLKDVSTVRYHLYANGIDKSYKVWFWHGEELNSDNVTNTMENTVDETNENDDLFNTINM Homology
BLAST of CsaV3_7G011410.1 vs. NCBI nr
Match: KAE8645902.1 (hypothetical protein Csa_011865, partial [Cucumis sativus]) HSP 1 Score: 222.6 bits (566), Expect = 1.6e-54 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CsaV3_7G011410.1 vs. NCBI nr
Match: XP_031744682.1 (uncharacterized protein LOC116405119 [Cucumis sativus]) HSP 1 Score: 214.9 bits (546), Expect = 3.3e-52 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CsaV3_7G011410.1 vs. NCBI nr
Match: XP_031741418.1 (uncharacterized protein LOC116403845 [Cucumis sativus] >XP_031741419.1 uncharacterized protein LOC116403845 [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 4.3e-52 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CsaV3_7G011410.1 vs. NCBI nr
Match: XP_031742855.1 (uncharacterized protein LOC116404482 [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 4.3e-52 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CsaV3_7G011410.1 vs. NCBI nr
Match: KAE8647232.1 (hypothetical protein Csa_019076, partial [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 4.3e-52 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CsaV3_7G011410.1 vs. ExPASy TrEMBL
Match: A0A5D3C1B5 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00300 PE=3 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 3.3e-42 Identity = 83/105 (79.05%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of CsaV3_7G011410.1 vs. ExPASy TrEMBL
Match: A0A5D3D5Q1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00970 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 3.3e-42 Identity = 83/105 (79.05%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of CsaV3_7G011410.1 vs. ExPASy TrEMBL
Match: A0A5D3D2T0 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003090 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 7.4e-42 Identity = 82/105 (78.10%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of CsaV3_7G011410.1 vs. ExPASy TrEMBL
Match: A0A5A7TJY9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005150 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 7.4e-42 Identity = 82/105 (78.10%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of CsaV3_7G011410.1 vs. ExPASy TrEMBL
Match: A0A5D3DSZ9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold7319G00190 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 9.6e-42 Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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