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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GAGGGGATCGAACCTCTACAACCTTTGGAGAGACATGTCATTTACCATCAAGTTATACTATTTTTTCGATATAAGTAAGCTGCAATAATTGTGGAATGTTTGCTCATTATGCCTTTTTAATTCAAGTTTTTTGTTTGTTGGAGAATCGAAAAAAAGTTAAAACTTTTGAAAGTTGTATACAAACATTTTTAGAAGTTATTAGGGAAGAGGAAAAAATATGAGTTTCGTTTACTTTTCCATAAGCTAAAATACTTTAAAGTACAAAATTAAAAAGAAAAAATTCCTTACTGCGATACACGTGGCTAAAAATGATTGCCGACTTTGAATTTCGTTTACGTATTTATATAAATACTATGCCCTTTCGTCGGGTTCTGGAGCCCTAGTTGAGGCTTAAGTTCACTATTCGTACGTTGCTTCATTTCCCCGATCAAAACCATTGAATTCGCTTCGTTGTATTGTAATTTTCTATGCAAGACGAATACCACACAGTGATAGATGGATCAGATTCAGTACTTTGAGAAGTACTTCGACAACATTTATGAGTACAGGTATTGTGTTCTTACTCTCAGTTTCCAACTCCATTGTTACTCGTTGTCTTGAAGGATTTTTTGGATTTGTAAGTGTTCATTCTTATTGTCTTCGATGTCTAATTGGATTCATTGGTGCAGGCACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGCTTCCTAAGAATCGTCTGCTCTCGGAA mRNA sequence GAGGGGATCGAACCTCTACAACCTTTGGAGAGACATGTCATTTACCATCAAGTTATACTATTTTTTCGATATAAACGAATACCACACAGTGATAGATGGATCAGATTCAGTACTTTGAGAAGTACTTCGACAACATTTATGAGTACAGGCACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGCTTCCTAAGAATCGTCTGCTCTCGGAA Coding sequence (CDS) GAGGGGATCGAACCTCTACAACCTTTGGAGAGACATGTCATTTACCATCAAGTTATACTATTTTTTCGATATAAACGAATACCACACAGTGATAGATGGATCAGATTCAGTACTTTGAGAAGTACTTCGACAACATTTATGAGTACAGGCACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGCTTCCTAAGAATCGTCTGCTCTCGGAA Protein sequence EGIEPLQPLERHVIYHQVILFFRYKRIPHSDRWIRFSTLRSTSTTFMSTGTWFSHPKWQSCFLRIVCSRX
Homology
BLAST of CsaV3_6G018770.1 vs. NCBI nr
Match: KAE8647002.1 (hypothetical protein Csa_016983, partial [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 5.0e-33 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 Query: 1 EGIEPLQPLERHVIYHQVILFFRYKRIPHSDRWIRFSTLRSTSTTFMSTGTWFSHPKWQS 60 EGIEPLQPLERHVIYHQVILFFRYKRIPHSDRWIRFSTLRSTSTTFMSTGTWFSHPKWQS Sbjct: 1 EGIEPLQPLERHVIYHQVILFFRYKRIPHSDRWIRFSTLRSTSTTFMSTGTWFSHPKWQS 60
Query: 61 CFLRIVCSR 70 CFLRIVCSR Sbjct: 61 CFLRIVCSR 69
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8647002.1 | 5.0e-33 | 100.00 | hypothetical protein Csa_016983, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CsaV3_6G018770.1.exon1 | CsaV3_6G018770.1.exon1 | exon |
CsaV3_6G018770.1.exon2 | CsaV3_6G018770.1.exon2 | exon |
CsaV3_6G018770.1.exon3 | CsaV3_6G018770.1.exon3 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CsaV3_6G018770.1.cds1 | CsaV3_6G018770.1.cds1 | CDS |
CsaV3_6G018770.1.cds2 | CsaV3_6G018770.1.cds2 | CDS |
CsaV3_6G018770.1.cds3 | CsaV3_6G018770.1.cds3 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CsaV3_6G018770.1 | CsaV3_6G018770.1-protein | polypeptide |
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