CsaV3_6G018770 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G018770
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 13379852 .. 13380580 (+)
RNA-Seq ExpressionCsaV3_6G018770
SyntenyCsaV3_6G018770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGGGGATCGAACCTCTACAACCTTTGGAGAGACATGTCATTTACCATCAAGTTATACTATTTTTTCGATATAAGTAAGCTGCAATAATTGTGGAATGTTTGCTCATTATGCCTTTTTAATTCAAGTTTTTTGTTTGTTGGAGAATCGAAAAAAAGTTAAAACTTTTGAAAGTTGTATACAAACATTTTTAGAAGTTATTAGGGAAGAGGAAAAAATATGAGTTTCGTTTACTTTTCCATAAGCTAAAATACTTTAAAGTACAAAATTAAAAAGAAAAAATTCCTTACTGCGATACACGTGGCTAAAAATGATTGCCGACTTTGAATTTCGTTTACGTATTTATATAAATACTATGCCCTTTCGTCGGGTTCTGGAGCCCTAGTTGAGGCTTAAGTTCACTATTCGTACGTTGCTTCATTTCCCCGATCAAAACCATTGAATTCGCTTCGTTGTATTGTAATTTTCTATGCAAGACGAATACCACACAGTGATAGATGGATCAGATTCAGTACTTTGAGAAGTACTTCGACAACATTTATGAGTACAGGTATTGTGTTCTTACTCTCAGTTTCCAACTCCATTGTTACTCGTTGTCTTGAAGGATTTTTTGGATTTGTAAGTGTTCATTCTTATTGTCTTCGATGTCTAATTGGATTCATTGGTGCAGGCACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGCTTCCTAAGAATCGTCTGCTCTCGGAA

mRNA sequence

GAGGGGATCGAACCTCTACAACCTTTGGAGAGACATGTCATTTACCATCAAGTTATACTATTTTTTCGATATAAACGAATACCACACAGTGATAGATGGATCAGATTCAGTACTTTGAGAAGTACTTCGACAACATTTATGAGTACAGGCACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGCTTCCTAAGAATCGTCTGCTCTCGGAA

Coding sequence (CDS)

GAGGGGATCGAACCTCTACAACCTTTGGAGAGACATGTCATTTACCATCAAGTTATACTATTTTTTCGATATAAACGAATACCACACAGTGATAGATGGATCAGATTCAGTACTTTGAGAAGTACTTCGACAACATTTATGAGTACAGGCACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGCTTCCTAAGAATCGTCTGCTCTCGGAA

Protein sequence

EGIEPLQPLERHVIYHQVILFFRYKRIPHSDRWIRFSTLRSTSTTFMSTGTWFSHPKWQSCFLRIVCSRX
Homology
[Close]
BLAST of CsaV3_6G018770 vs. NCBI nr
Match: KAE8647002.1 (hypothetical protein Csa_016983, partial [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 5.0e-33
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  EGIEPLQPLERHVIYHQVILFFRYKRIPHSDRWIRFSTLRSTSTTFMSTGTWFSHPKWQS 60
          EGIEPLQPLERHVIYHQVILFFRYKRIPHSDRWIRFSTLRSTSTTFMSTGTWFSHPKWQS
Sbjct: 1  EGIEPLQPLERHVIYHQVILFFRYKRIPHSDRWIRFSTLRSTSTTFMSTGTWFSHPKWQS 60

Query: 61 CFLRIVCSR 70
          CFLRIVCSR
Sbjct: 61 CFLRIVCSR 69

The following BLAST results are available for this feature:
BLAST of CsaV3_6G018770 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647002.15.0e-33100.00hypothetical protein Csa_016983, partial [Cucumis sativus][more]
BLAST of CsaV3_6G018770 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G018770 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G018770 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G018770.1CsaV3_6G018770.1mRNA