CsaV3_6G015060.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGTGTTTTCAAAGATGTAAAGATCTGTTATGTTGATGTTAAAATGATTAATGTGAGTGTTAGCTAATAAAATATATAAAAGCGATGAGGAAGGGAGGGAATAGGGAATAGGGAATTGTAGACGATTTGGATGCGTCCAACAAACAGCCGTGTTTTTGTTTCTCACGCCTACTTTTTATTACGCTCATTAAACCAACCTAACGCGTTACGCGTATTTAAACACATCCAATCGCCGTTTCTTTGGTTGCAAACAAAAGTTATTATTGTTATTATTTTTATAAAATGAAAAATGAAAAATGAAAAATGAAAAATGAAAAGAAAAGAAGGCAGTAAAATTAATTTATAATAAATAACAAATTCAATTAACACGAGACATTTAAAAACAAAACAAAATTAAATACGAAGGAAAGAAAGAAGAAAGAAAGAAAGAACGAAAGAACGAAAGAGAAGAGCGAAGGCAAGAAAGGAAATTGTCTGGAACTTTCTTCCAGACCCAAAAGGAATCTCCAAAACAACTCACAACCGCCCTTCTCCCTCTTGTCGCTTCTTCTCATTTTCTTCCTTTATAATTCTCTACCAGATTCCTTCTTTCTTTCTTCCTTCATACCTATATCGCTTCTTCAATTTCTATATTCACTTTCCTCCCTCCATTCAATCATCGCAACACAGGTAATTTCATGATTACTCTCTTTCACTCTTTTTTTTTTTTTTCTTCTTCTTCTTCTTCTTTTTTCCATGTCTTCTCCTTCGTGTTTCTGATCTGTTTGTTTTTAGATTTTGTTATTTTAGGTATTGTTGTTTTAATTATCAATCCATGGCTGAAGAACATAGATGCCAAGCGCCCAAGCTTTGTGCGAACAATTGCGGGTTCTTTGGCAGTCCCGCCACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTAGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGGAAGCGAAGGAACAACGCGTGGAGGAGGAAGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAACAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGGGAGAAACTGCAGAAGATTTGAGGGAAGGAAATTAAAGGGGGTAAAATTGTCTTATTTTTCTTCATCTTGGTTTGGTATATGTCTCTTTCGTGTGGTAAGGGCCAGCGCGTGGCGCGGGACCTGGTGGAGCATTTCGAAAAATATTGGTGGGTTGGTTGTATAAAATTAATATTCAAATAATATGAGTCTTCTATACATTTCAAATTTCTATTGCTACATAATAATGCTTTTATTGTTTGGTTCATTCATTCTCATTCTCATTCTCATTCTCATCCACATCAATATAATAAATAAATAAATAATTTTAATTGATGAGATCAAGACCCTTCAATCGCATTGTCTCTAATCAATATTACATATATATTATTGCACTATGTTAGTTGTGTGTTATTGTTTACTACTTTTTATCATTTATGTGCAAAAAATCAACAAACATAAAGTTCAAGAACAAAAGATAAAAATGGATCGATGCTTAATTAATCATTAAATGATTTTCCTATTTACAAAACATAAATAGTACTACCATATAGAAACTTGTAGAAAAGAATATGAACAACCAAAGCACTTTGTTGAACCGACACCCGTACTAAGAAAAAATCAAAACGTGAGTGAAAGTGATGGTATATTAGGGTTGAAAATAAAGAGGATTGCTAAACAATTCAGTAGTTGAAAATGGTAACTTGAGAGAAAATGAATTAAAAGCTTAGAAAGGGAAACCCTTAATTTTGGGACCTAAGCAGTAGTGTACATGACCCCCTTATATACTCGTTGTGTCACAACCCGATCCGCAAACAATCAAAACGCAGAAAGTAGTGCATATAGAACGCGATTTAGCGTAAAACCTTGAAATTGGTCTTATCCCCTAGCTTAAAATCAACTTAAACTTTTATTCAACAAC ATGGCTGAAGAACATAGATGCCAAGCGCCCAAGCTTTGTGCGAACAATTGCGGGTTCTTTGGCAGTCCCGCCACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTAGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGGAAGCGAAGGAACAACGCGTGGAGGAGGAAGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAACAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGGGAGAAACTGCAGAAGATTTGA ATGGCTGAAGAACATAGATGCCAAGCGCCCAAGCTTTGTGCGAACAATTGCGGGTTCTTTGGCAGTCCCGCCACAAGAGATTTCTGTTCTAAATGTTACCGAGATCTGCAGTTGAAGGAACAACAATCCTCCACCGCTAAACTAGCCTTAAACCAAACCCTGGCGGCGTCGTTGTTGTTAAATCCGGAACCGGAAGCGAAGGAACAACGCGTGGAGGAGGAAGAGGAGGTGAGGACGGAAGTGGTTCGGACGGCAGCGGCGGAGGAAAGACAACAACAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGGGAGAAACTGCAGAAGATTTGA MAEEHRCQAPKLCANNCGFFGSPATRDFCSKCYRDLQLKEQQSSTAKLALNQTLAASLLLNPEPEAKEQRVEEEEEVRTEVVRTAAAEERQQQQPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVVKGEKLQKI* Homology
BLAST of CsaV3_6G015060.1 vs. NCBI nr
Match: XP_004149261.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis sativus] >XP_004149263.1 zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis sativus] >KGN46960.1 hypothetical protein Csa_020652 [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 1.8e-83 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. NCBI nr
Match: XP_008458577.1 (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis melo] >KAA0033412.1 zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 284.3 bits (726), Expect = 6.6e-73 Identity = 148/167 (88.62%), Postives = 151/167 (90.42%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. NCBI nr
Match: XP_038900394.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Benincasa hispida]) HSP 1 Score: 246.9 bits (629), Expect = 1.2e-61 Identity = 128/167 (76.65%), Postives = 138/167 (82.63%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. NCBI nr
Match: XP_023513388.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 244.6 bits (623), Expect = 5.8e-61 Identity = 126/169 (74.56%), Postives = 138/169 (81.66%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. NCBI nr
Match: XP_022944420.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 3-like [Cucurbita moschata] >KAG7010346.1 Zinc finger A20 and AN1 domain-containing stress-associated protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60 Identity = 122/166 (73.49%), Postives = 132/166 (79.52%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy Swiss-Prot
Match: Q9ZNU9 (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana OX=3702 GN=SAP3 PE=2 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 7.6e-48 Identity = 98/166 (59.04%), Postives = 122/166 (73.49%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy Swiss-Prot
Match: Q94B40 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana OX=3702 GN=SAP6 PE=2 SV=2) HSP 1 Score: 173.7 bits (439), Expect = 1.6e-42 Identity = 90/173 (52.02%), Postives = 113/173 (65.32%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy Swiss-Prot
Match: Q9SJM6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana OX=3702 GN=SAP4 PE=1 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.2e-39 Identity = 84/163 (51.53%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy Swiss-Prot
Match: Q6H754 (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP5 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 8.2e-34 Identity = 76/157 (48.41%), Postives = 96/157 (61.15%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy Swiss-Prot
Match: Q9SZ69 (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana OX=3702 GN=SAP7 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.0e-32 Identity = 71/160 (44.38%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy TrEMBL
Match: A0A0A0KB65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152950 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 8.9e-84 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy TrEMBL
Match: A0A5A7SQF2 (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00640 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 3.2e-73 Identity = 148/167 (88.62%), Postives = 151/167 (90.42%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy TrEMBL
Match: A0A1S3C8A2 (zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Cucumis melo OX=3656 GN=LOC103497937 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 3.2e-73 Identity = 148/167 (88.62%), Postives = 151/167 (90.42%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy TrEMBL
Match: A0A6J1FYN2 (zinc finger A20 and AN1 domain-containing stress-associated protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111448873 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 8.1e-61 Identity = 122/166 (73.49%), Postives = 132/166 (79.52%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. ExPASy TrEMBL
Match: A0A6J1JA74 (zinc finger A20 and AN1 domain-containing stress-associated protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111483963 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 4.0e-60 Identity = 124/171 (72.51%), Postives = 137/171 (80.12%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. TAIR 10
Match: AT2G27580.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 191.4 bits (485), Expect = 5.4e-49 Identity = 98/166 (59.04%), Postives = 122/166 (73.49%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. TAIR 10
Match: AT2G27580.2 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 191.4 bits (485), Expect = 5.4e-49 Identity = 98/166 (59.04%), Postives = 122/166 (73.49%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. TAIR 10
Match: AT3G52800.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43 Identity = 90/173 (52.02%), Postives = 113/173 (65.32%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. TAIR 10
Match: AT2G36320.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40 Identity = 84/163 (51.53%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of CsaV3_6G015060.1 vs. TAIR 10
Match: AT4G12040.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-33 Identity = 71/160 (44.38%), Postives = 102/160 (63.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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