CsaV3_6G000670.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G000670.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	AT-rich interactive domain-containing protein 1-like
Location	chr6: 438796 .. 443265 (-)
Sequence length	1188
RNA-Seq Expression	CsaV3_6G000670.1
Synteny	CsaV3_6G000670.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTCAGATGAGTTCATGAATTGTATTGCCTTTGACGACAATTCCATTTCAGATTTTTCCAAGCGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGATGTATTTCCTCGCAGAAGCAAGAAATTCAAGGATATTGAACATTGCAATACTGAAAATGGGGATGTACAAATTATTGATCCACCTTTCGTCAAGGAAACAAATGTTGTCCAGGAGAAGAGTAAGCAGGAACCAATGTTGGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCCTCAATATCCTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAGGTTTTGGTGGTTCGAGAGGAAATGTTCTTGAAAAGACAAGTTGATTCAAGTAGCGAACAATCTTTCATGCAGGTACTTTACATACATGCTCATGTTGTTTGCATTTAGATCTTTACTCATTTAAAATTGTTGATTTGCATGACGTGGTGATAAAAAAATGTCTATCTCTGTGCATGTATGAAGTTTGTCTCATGATAAAGCTGATTGTGGTAGTTTTTAGGCTGCTTTAGTCTTGTTTTGTTTTTCATATTATCAGTCCATCTTGAAATGATTTTCATACCATGCATTTTGATTAGTATATATTTACATCTTAAATAATGTTCTTGTCATTGTAAACTGAAGATCCTCATTGTGAAAGCCAAAATGGAGCTAAGACTTAATCTTTAGAATTTATCGCTGAATCACTGTAGTAATTTTTTTTTCTTTATCTGCCATAATATCTATCGTGCTAGTTTTTAATGTTATGATCCTCTTTAGTTTTTAGGAACTTCTGCAGTGGTCTTTCTTTATGTTGCTTATGGTTCCATGACCTTGTGTCTGTGTGTAAATAAAACTAAAGAATCCATCTTATCAATTCTGATAATTATGTCTTCTTAAGAAGATACGTGGAGGATTAGCTGTTTAAAATAGTGGTTCCCTTATTAAGAAGAAAATTAAACTATTTAAGACATCGATTTCATTTAGCCTTGTTCTGTTGTGGTCAATAGCTTGAAGCTTCAGCCGCTATTTTTTATTTTTGATCTGCTTGTAGTCACTAGTCAGAGTGTGCTTGAAAATGTTCTTAAGAGTATAAAAAATGCATTGAGAACATTTTCTAGGTTGGGTGATTGCAGATGCATGAATGATTTTAGTACTCTGAGAGGAAGTACTTTAGTAGAAACACTAAGCAGAAAAAAACATCATTAATTTGGAATTATTTTACCCTAAGAAATGTAGAATAGTAGCCTGTTTTTTAGAAACACGAAATAGAATAGTAGCTACAGTGTGATATTTACAAATTCTTAAGATTTTATCAGATATCCAAAATTGTCAAGTTAACCCGGAAGGACATGCATCATCTACATTAAATAAAATACCAAAGTATAACTATGATTAACATCATCTACGTTAAATAAAATACCAAAGTATAACTATGATTAACATTTAGGGATTATTTGATTCACTAGAAAAAAAAATGTTTTTCAAAACATTTTTATTTAAAACGCTTTTTATAAAACTTTTTTTAATATATGTGGGTGTACTAGTCAACTTAAGTACACCTCGACTAATCTCATGGGACAACCTGTCCGACTCTACAATATTTTGATGTCAAGAAAACTAGTAGAAAATTAATTTTTAGGTAAGTGGTCAATGTTCACTAGAAAAATTTGTTTAAAATAAACTTTAAAAATATTTTAAAATTTATTTTGAATGGTTGCTAAAATTAAAAAAGAAAAAACATTTTTATTTAAAACCGTTTTTTATATATATGAATTTTCTGGTCAACTTAAGTCCACCTCAACTAATCTCATGGTACTACATTTTGGTGCTTAGAAAACTTGATAGGAAATTAGTTTTTAGGTAAGTAGTCAATATCTACTATAAAAACTATTTAAAATAAACTTTGAAAGTGTTTCAAAATCTATTTTGCTAAATATTTCAATGTTTTCTATTTTTAAAATTAAATACTTGAAAAATTAAACGAAACACAGGACACCCTTAGATTCTCCCCATGTTAACAGAGTGAATTTGTAAAATTTAATTAGATTTTCTTTTTACAAAGCAACTGGTAATATATTGATTAAATTGGAAAATTGATCCCTATGATTTTGGAGAAAGCTTTGTGGTTTTAAAACTTAATCGTTCTTATGGTTTGAAGAATCTCATAACTAGCTCTTATTGTTTGATTTCTGCCTTAATTATGTGAAATTCAACTGGTAAACAAACTCTAATTCTATTTTTTTTTCTTTGGTGCCTTGAAGCACAAAATATTATTTTGTAATTATAGCCTAGGTCCAATTCTACAAAATTGGAAGCCGATGCTTTATTAGTTTTTGTTGGGAGAGGGGTTGCTCATCCCTCCCCTAGCTCTCTCTCTCTTCGTTTTTTTACCTTTTTTTTAAAAAATATATATTTTCAGTTACTTTAAAAAGGAGAACAAAAAAACTAGAAAACCTAATCTAGACTAAGAATTCATTTTGATACCCATCGGTGTTTTGGATCAATTTATATGCACCTCGACAGAGATAACCAACCTAACCCTACATCATTTAGATGTCATGGAATCTTACAAGATATTATACTTTGGTAGTGGTCATCATGGATCGAGCTCATGATCTCTTAGTCATTTATTTTATTTTTACCACTATATCCACAATGGTTTGTAATCTAGACTAAAAATATTTCTATCCAACCATTAAAATATCTAAATGTAGCCTCAAAATTGAGGAGATTTAAAAGCACCCAAAGTTTAGTTAAATAGCAATCTATCGCTATCACAAAAGCTAATACCAACTAAAAATAATCTTTCATTCATAGTAGCTACTAGCTACAAAGGTCGTTAAAGAAAAGTTGACCATTTTATCTCTTTAAGTTTTATCCTTGCCTTATTTTGATTCCAACCATTGAAGAACTCGAGATTTCATAATTTGGAGAATGCCCTTCATGAACTGTGCAATTGAGAATGTATACTAACTTTACCATAAACCATAAATTGATAATTAAATCGTTATTCTTCACCCTACTCTATTTTTGGTTTTTTAACTAAGATTTTTTTCCTTGTTAATTTTCTAATCTTAGGCTCTATTTCTAGTACTAACACTAAATTTTATAAGTGTACTACATATGAGAGGTGTTTTACATCATAGAAATTAAACAACGATAAAGAAAAGATAGTATGCAAAGTCTAGGGACCAAAAAATATTGACAGCAAGACAATGAAAGCAGATGAAAGAATTGACTACAAGAAAATGAAAGCAAATGATTGTGGAAGTTAGGGATCAAAATAAGATTAAAATCATTTTTGTGCCCTAAAATTTAGAACTTATATTAGTTCCTTTATTGATGTTGAGTTTAAATAATTTCTTATTGCATCAATATGTTTGAAATTTTATTATACTGTGTATAGAAACGAATTAAATTCGAAGGAAAGGAAGAATAAATGAAACAAAAAGTTAATATTTCTATATAGGTAAAATTGATTAATGTACATATATGTTCTTTTTAAAAAAAGGATTTAACAGATGTAAACAACATAATGATCAGATTACTATTTCTCATCTATTTATTCTCCTTCCTAGTTGACCACATCATTTCTATTACTTTAGCTTGAAAGTCTTTATTATTATTTGGTTCAATTTATCTTCTCTATTGCAGAAAAACCAGAAGATGCATCCTTGTATGTACGATGATGATACAGCTCCGATTTACAATCTTAGGAAGAGATTAAGCTTGGATAAAAAGGATCTTTCTCAAGAACCTGTTTCTAAAGCAAGTGATTCGTCTCCTACAGATTCATTAGATGATTACAAGCCCGTTCCTCTGGGGTCAGATTATCAAGCTCGAGTCCCGGAATGGAATGGTGTGATATCCAAGAGTGATTTAAAGTGGTTGGGAACCCAAGACTGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTTGAAAGGGATCCCATTGGAAGAGGAAGGCGAGATCCTTGTGGGTGCATGGACCCCAATTCGGTTGGCTGTGTCCAATTTCACGTTTCTGAGAAAAGGCACAAATTGAAGCTTGAGTTGGGCGACGCGTTTCTTCAATGGAGATTTGATAAGATGGGGGAAGAAGTTACATTTGCTTGGACGGTGGACGATGAGAAAAAATTCGAGGACATAGTGTCATCAAACCCTCCGTCCCTTGGGATATCTTATTGGGAAGATATCATTGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTGGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGAGTTACGCCAAATGAAATCAATAGTGATGAGGAATCAGAATCCGGAACTGCAACCAATGGATTTGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTACTCTCCTAAGAAGCCACGATAA

mRNA sequence

ATGTTGTCAGATGAGTTCATGAATTGTATTGCCTTTGACGACAATTCCATTTCAGATTTTTCCAAGCGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGATGTATTTCCTCGCAGAAGCAAGAAATTCAAGGATATTGAACATTGCAATACTGAAAATGGGGATGTACAAATTATTGATCCACCTTTCGTCAAGGAAACAAATGTTGTCCAGGAGAAGAGTAAGCAGGAACCAATGTTGGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCCTCAATATCCTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAGGTTTTGGTGGTTCGAGAGGAAATGTTCTTGAAAAGACAAGTTGATTCAAGTAGCGAACAATCTTTCATGCAGAAAAACCAGAAGATGCATCCTTGTATGTACGATGATGATACAGCTCCGATTTACAATCTTAGGAAGAGATTAAGCTTGGATAAAAAGGATCTTTCTCAAGAACCTGTTTCTAAAGCAAGTGATTCGTCTCCTACAGATTCATTAGATGATTACAAGCCCGTTCCTCTGGGGTCAGATTATCAAGCTCGAGTCCCGGAATGGAATGGTGTGATATCCAAGAGTGATTTAAAGTGGTTGGGAACCCAAGACTGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTTGAAAGGGATCCCATTGGAAGAGGAAGGCGAGATCCTTGTGGGTGCATGGACCCCAATTCGGTTGGCTGTGTCCAATTTCACGTTTCTGAGAAAAGGCACAAATTGAAGCTTGAGTTGGGCGACGCGTTTCTTCAATGGAGATTTGATAAGATGGGGGAAGAAGTTACATTTGCTTGGACGGTGGACGATGAGAAAAAATTCGAGGACATAGTGTCATCAAACCCTCCGTCCCTTGGGATATCTTATTGGGAAGATATCATTGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTGGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGAGTTACGCCAAATGAAATCAATAGTGATGAGGAATCAGAATCCGGAACTGCAACCAATGGATTTGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTACTCTCCTAAGAAGCCACGATAA

Coding sequence (CDS)

ATGTTGTCAGATGAGTTCATGAATTGTATTGCCTTTGACGACAATTCCATTTCAGATTTTTCCAAGCGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGATGTATTTCCTCGCAGAAGCAAGAAATTCAAGGATATTGAACATTGCAATACTGAAAATGGGGATGTACAAATTATTGATCCACCTTTCGTCAAGGAAACAAATGTTGTCCAGGAGAAGAGTAAGCAGGAACCAATGTTGGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCCTCAATATCCTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAGGTTTTGGTGGTTCGAGAGGAAATGTTCTTGAAAAGACAAGTTGATTCAAGTAGCGAACAATCTTTCATGCAGAAAAACCAGAAGATGCATCCTTGTATGTACGATGATGATACAGCTCCGATTTACAATCTTAGGAAGAGATTAAGCTTGGATAAAAAGGATCTTTCTCAAGAACCTGTTTCTAAAGCAAGTGATTCGTCTCCTACAGATTCATTAGATGATTACAAGCCCGTTCCTCTGGGGTCAGATTATCAAGCTCGAGTCCCGGAATGGAATGGTGTGATATCCAAGAGTGATTTAAAGTGGTTGGGAACCCAAGACTGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTTGAAAGGGATCCCATTGGAAGAGGAAGGCGAGATCCTTGTGGGTGCATGGACCCCAATTCGGTTGGCTGTGTCCAATTTCACGTTTCTGAGAAAAGGCACAAATTGAAGCTTGAGTTGGGCGACGCGTTTCTTCAATGGAGATTTGATAAGATGGGGGAAGAAGTTACATTTGCTTGGACGGTGGACGATGAGAAAAAATTCGAGGACATAGTGTCATCAAACCCTCCGTCCCTTGGGATATCTTATTGGGAAGATATCATTGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTGGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGAGTTACGCCAAATGAAATCAATAGTGATGAGGAATCAGAATCCGGAACTGCAACCAATGGATTTGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTACTCTCCTAAGAAGCCACGATAA

Protein sequence

MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQIIDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR*

Homology

[Close]

BLAST of CsaV3_6G000670.1 vs. NCBI nr
Match: XP_004138586.1 (AT-rich interactive domain-containing protein 1 [Cucumis sativus] >XP_011656344.1 AT-rich interactive domain-containing protein 1 [Cucumis sativus] >KGN45671.1 hypothetical protein Csa_005371 [Cucumis sativus])

HSP 1 Score: 817.4 bits (2110), Expect = 5.4e-233
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI
Sbjct: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV
Sbjct: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE
Sbjct: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV
Sbjct: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR
Sbjct: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 395

[Close]

BLAST of CsaV3_6G000670.1 vs. NCBI nr
Match: XP_008458204.1 (PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_008458205.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_016902234.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 738.0 bits (1904), Expect = 4.2e-209
Identity = 356/395 (90.13%), Postives = 375/395 (94.94%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMNC+AFD+NSISDFSKRI DMKSDRMK+GD FPRRSKK KDI H N EN DVQI
Sbjct: 1   MLSDEFMNCVAFDENSISDFSKRILDMKSDRMKTGDAFPRRSKKLKDIAHRNIENEDVQI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           IDPP +KETNVVQEKSKQEPMLGLLDWLK IARNPCD SISSLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPLIKETNVVQEKSKQEPMLGLLDWLKVIARNPCDSSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VLVVREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDDT PIYNLRKRLSLDKKD+SQEPV
Sbjct: 121 VLVVREEMFVKRQVDSSSEQSSVQRNQRMHPCMYDDDTVPIYNLRKRLSLDKKDVSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SKA+DSSPTDSLDDYKPV LGSDYQARVPEWNGVIS+SDLKWLGTQDWPLKKGRNRYLVE
Sbjct: 181 SKANDSSPTDSLDDYKPVLLGSDYQARVPEWNGVISESDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIG+GRRDPCGCMD NSVGCVQFHVSEKR +LKLELGDAFL+WRFD+MGE+VT AWTV
Sbjct: 241 RDPIGKGRRDPCGCMDANSVGCVQFHVSEKRQRLKLELGDAFLRWRFDEMGEDVTLAWTV 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           +DEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+E
Sbjct: 301 EDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESGTAT  FGNEVHNS GSIFYSPKKPR
Sbjct: 361 IDSDEESESGTATIRFGNEVHNSPGSIFYSPKKPR 395

[Close]

BLAST of CsaV3_6G000670.1 vs. NCBI nr
Match: XP_038875899.1 (AT-rich interactive domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 737.6 bits (1903), Expect = 5.5e-209
Identity = 349/395 (88.35%), Postives = 378/395 (95.70%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMNC++FD+NSISDFSKRI +MKSDRMKSGDVFPRRSKK KDI+HCNTEN D++I
Sbjct: 1   MLSDEFMNCVSFDENSISDFSKRILNMKSDRMKSGDVFPRRSKKLKDIDHCNTENEDIKI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           IDPPF+KETNV QE SKQEPMLGLLDWLKGIARNPCDPSI SLPEKSKWKSYG EEIWKQ
Sbjct: 61  IDPPFIKETNVAQE-SKQEPMLGLLDWLKGIARNPCDPSICSLPEKSKWKSYGKEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VL+VREEMF+KRQVDSSSEQSF+Q+NQ+MHPCMYDDDT PIYNLRKRLS DKKDLSQEPV
Sbjct: 121 VLLVREEMFVKRQVDSSSEQSFVQRNQRMHPCMYDDDTVPIYNLRKRLSFDKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WPLK+GR+RYLVE
Sbjct: 181 SKISDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKRGRHRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIG+GRRD CGC+D NSVGCV+FHV+EKRH+LKLELG+ FLQWRFDKMGE+VTFAWTV
Sbjct: 241 RDPIGKGRRDSCGCLDANSVGCVKFHVAEKRHRLKLELGNTFLQWRFDKMGEDVTFAWTV 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           +DEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+E
Sbjct: 301 EDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEES+SG ATNGFGNEVHNS GSIFYSPKKPR
Sbjct: 361 IDSDEESDSGIATNGFGNEVHNSPGSIFYSPKKPR 394

[Close]

BLAST of CsaV3_6G000670.1 vs. NCBI nr
Match: KAG7013748.1 (AT-rich interactive domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 701.4 bits (1809), Expect = 4.3e-198
Identity = 335/395 (84.81%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMN +AFD+NSISDFSKRI  MKSD+MKSGDVFPRRSKK KDI HCN EN D++I
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNENEDIKI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           ID   VKE N   E+ K+EPMLGLL+WLKGIARNPCDPS+ SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDLRLVKEPNFTPER-KEEPMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VL+VREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDDT PIYNLRKRLS +KKDLSQEPV
Sbjct: 121 VLLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDTVPIYNLRKRLSFEKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SK SD SPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WPLKKGRNRYLVE
Sbjct: 181 SKTSDFSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGC D NSVGCV+FHV+EKRHK+KLELG+AFLQWRFDKMGE+VTF+WT 
Sbjct: 241 RDPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGNAFLQWRFDKMGEDVTFSWTA 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIV SNPPSLGIS+W++IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVKSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESG  TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 IDSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of CsaV3_6G000670.1 vs. NCBI nr
Match: XP_023547658.1 (AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023547659.1 AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 699.5 bits (1804), Expect = 1.6e-197
Identity = 333/395 (84.30%), Postives = 364/395 (92.15%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLS+EFMN +AFD+NSISDFSKRI  MKSD+MKSGDVFPRRSKK KDI HCN E  D++I
Sbjct: 1   MLSEEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNETEDIKI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           ID   VKE N   E+ K+EPMLGLL+WLKGIARNPCDPS+ SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDLRLVKEPNFTPER-KEEPMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VL+VREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDDT PIYNLRKRLS +KKDLSQEPV
Sbjct: 121 VLLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDTVPIYNLRKRLSFEKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WP+KKGRNRYLVE
Sbjct: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPMKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGC D NSVGCV+FHV+EKRHK+KLELG+AFLQWRFDKMGE+VTF+WT 
Sbjct: 241 RDPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGNAFLQWRFDKMGEDVTFSWTA 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIV+SNPPSLGIS+W++IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESG  TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 IDSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of CsaV3_6G000670.1 vs. ExPASy Swiss-Prot
Match: Q84JT7 (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ARID1 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.0e-69
Identity = 138/295 (46.78%), Postives = 193/295 (65.42%), Query Frame = 0


Query: 75  KSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQV 134
           K K+E  L  L WL  +A++PCDPS+  +P++S+W SYG+EE WKQ+L+ R     +   
Sbjct: 244 KRKRECPLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEEPWKQLLLFRAS---RTNN 303

Query: 135 DSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDD 194
           DS+ E+++ QK QKMHPC+YDD     YNLR+RLS +  D  +      SD   +D  D 
Sbjct: 304 DSACEKTW-QKVQKMHPCLYDDSAGASYNLRERLSYE--DYKRGKTGNGSDIGSSDEED- 363

Query: 195 YKPVPL-GSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNR--YLVERDPIGRGRRDP 254
            +P  L GS +QA+VPEW G+  +SD KWLGT+ WPL K + +   L+ERD IG+GR+DP
Sbjct: 364 -RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDP 423

Query: 255 CGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVS 314
           CGC +P S+ CV+FH++ KR KLKLELG AF  W FD MGE     WT  + KK + ++S
Sbjct: 424 CGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTLQYWTDLELKKIKSLMS 483

Query: 315 SNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEE 367
           S PPSL  ++        PS+S+  +V Y+YNV LL+ R  Q+R+TP++I+SD +
Sbjct: 484 S-PPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSRITPHDIDSDTD 529

[Close]

BLAST of CsaV3_6G000670.1 vs. ExPASy Swiss-Prot
Match: Q9LDD4 (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARID2 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.8e-52
Identity = 119/350 (34.00%), Postives = 177/350 (50.57%), Query Frame = 0


Query: 77  KQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQVDS 136
           K++ + G+L WL  +A +P DP+I  +P  SKWK Y   + W QV   +  + ++R  D+
Sbjct: 218 KRDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLLVQR--DN 277

Query: 137 SS----EQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSL 196
           +        F       HP MY+DD   I  L  R S+   +LS+   S   + S   SL
Sbjct: 278 AELRYRYHPFRGHQNIHHPSMYEDDRKSIGRL--RYSIRPPNLSKHCSSSCCNGSSLVSL 337

Query: 197 DDYKP-----------------------------------VPLGSDYQARVPEWNGVISK 256
              +                                    + +G  +QA+V EW      
Sbjct: 338 SKSRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTESGVD 397

Query: 257 SDLKWLGTQDWPLKKGRN-RYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKL 316
           SD KWLGT+ WP +        +  D +G+GR D C C     V C + H++EKR +LK 
Sbjct: 398 SDSKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRMELKR 457

Query: 317 ELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKAD 376
           ELGD F  WRF++MGEEV   WT ++EK+F+D++ ++P     S+W +  ++FP + + +
Sbjct: 458 ELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQ----SFWTNAAKNFPKKKREE 517

Query: 377 LVGYYYNVFLLRRRGHQNRVTPNEINSDEESESGTATNGFGNEVHNSSGS 387
           LV YY+NVFL+ RR +QNRVTP  I+SD+E   G+    FG +   SSGS
Sbjct: 518 LVSYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSFGRDAVTSSGS 559

[Close]

BLAST of CsaV3_6G000670.1 vs. ExPASy TrEMBL
Match: A0A0A0KD11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004620 PE=4 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 2.6e-233
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI
Sbjct: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV
Sbjct: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE
Sbjct: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV
Sbjct: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR
Sbjct: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 395

[Close]

BLAST of CsaV3_6G000670.1 vs. ExPASy TrEMBL
Match: A0A1S3C8K0 (AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497705 PE=4 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 2.0e-209
Identity = 356/395 (90.13%), Postives = 375/395 (94.94%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMNC+AFD+NSISDFSKRI DMKSDRMK+GD FPRRSKK KDI H N EN DVQI
Sbjct: 1   MLSDEFMNCVAFDENSISDFSKRILDMKSDRMKTGDAFPRRSKKLKDIAHRNIENEDVQI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           IDPP +KETNVVQEKSKQEPMLGLLDWLK IARNPCD SISSLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPLIKETNVVQEKSKQEPMLGLLDWLKVIARNPCDSSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VLVVREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDDT PIYNLRKRLSLDKKD+SQEPV
Sbjct: 121 VLVVREEMFVKRQVDSSSEQSSVQRNQRMHPCMYDDDTVPIYNLRKRLSLDKKDVSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SKA+DSSPTDSLDDYKPV LGSDYQARVPEWNGVIS+SDLKWLGTQDWPLKKGRNRYLVE
Sbjct: 181 SKANDSSPTDSLDDYKPVLLGSDYQARVPEWNGVISESDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIG+GRRDPCGCMD NSVGCVQFHVSEKR +LKLELGDAFL+WRFD+MGE+VT AWTV
Sbjct: 241 RDPIGKGRRDPCGCMDANSVGCVQFHVSEKRQRLKLELGDAFLRWRFDEMGEDVTLAWTV 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           +DEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+E
Sbjct: 301 EDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESGTAT  FGNEVHNS GSIFYSPKKPR
Sbjct: 361 IDSDEESESGTATIRFGNEVHNSPGSIFYSPKKPR 395

[Close]

BLAST of CsaV3_6G000670.1 vs. ExPASy TrEMBL
Match: A0A6J1H398 (AT-rich interactive domain-containing protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460098 PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 1.8e-197
Identity = 334/395 (84.56%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMN +AFD+NSISDFSKRI  MKSD+MKSGDVFPRRSKK KDI HCN E+ D++I
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNESEDIKI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           ID   VKE N   E+ K+E MLGLL+WLKGIARNPCDPS+ SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDLRLVKEPNFTPER-KEERMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VL+VREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDD  PIYNLRKRLS +KKDLSQEPV
Sbjct: 121 VLLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDMVPIYNLRKRLSFEKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WPLKKGRNRYLVE
Sbjct: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGC D NSVGCV+FHV+EKRHK+KLELGDAFLQWRFDKMGE+VTF+WT 
Sbjct: 241 RDPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGDAFLQWRFDKMGEDVTFSWTA 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIV+SNPPSLGIS+W++IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESG  TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 IDSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of CsaV3_6G000670.1 vs. ExPASy TrEMBL
Match: A0A6J1H4K9 (AT-rich interactive domain-containing protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460098 PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 1.8e-197
Identity = 334/395 (84.56%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMN +AFD+NSISDFSKRI  MKSD+MKSGDVFPRRSKK KDI HCN E+ D++I
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNESEDIKI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           ID   VKE N   E+ K+E MLGLL+WLKGIARNPCDPS+ SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDLRLVKEPNFTPER-KEERMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VL+VREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDD  PIYNLRKRLS +KKDLSQEPV
Sbjct: 121 VLLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDMVPIYNLRKRLSFEKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WPLKKGRNRYLVE
Sbjct: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGC D NSVGCV+FHV+EKRHK+KLELGDAFLQWRFDKMGE+VTF+WT 
Sbjct: 241 RDPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGDAFLQWRFDKMGEDVTFSWTA 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIV+SNPPSLGIS+W++IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESG  TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 IDSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of CsaV3_6G000670.1 vs. ExPASy TrEMBL
Match: A0A6J1L5C2 (AT-rich interactive domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499270 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 8.8e-197
Identity = 332/395 (84.05%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMN +AFD+NSISDFSKRI  MKSD+MKSGDVFPRRSKK KDI HCN EN D++I
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNENEDIKI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           ID   VKE N   E+ K+EP+LGLL+WLKGIARNPCDPS+ SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDLRLVKEPNFTPER-KEEPLLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VL+VRE+MF+KRQVDSSSEQS +Q+NQ+MHPCMYD+DT PIYNLRKRLS +KKDLSQEPV
Sbjct: 121 VLLVREKMFVKRQVDSSSEQSLVQRNQRMHPCMYDNDTVPIYNLRKRLSFEKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQ +VPEWNGVIS+SDLKWLGTQDWPLKK RNRYLVE
Sbjct: 181 SKTSDSSPTDSSDDYKPVPLGSDYQTQVPEWNGVISESDLKWLGTQDWPLKKVRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGC D NSVGCV+FHV+EKRHK+KLELGDAFLQWRFDKMGE+VTF+WT 
Sbjct: 241 RDPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGDAFLQWRFDKMGEDVTFSWTA 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIV+SNPPSLGIS+W++IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESG  TNG  N+VHNSS SIFYSPKKPR
Sbjct: 361 IDSDEESESGIVTNGLLNQVHNSSDSIFYSPKKPR 394

[Close]

BLAST of CsaV3_6G000670.1 vs. TAIR 10
Match: AT2G46040.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 265.4 bits (677), Expect = 7.4e-71
Identity = 138/295 (46.78%), Postives = 193/295 (65.42%), Query Frame = 0


Query: 75  KSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQV 134
           K K+E  L  L WL  +A++PCDPS+  +P++S+W SYG+EE WKQ+L+ R     +   
Sbjct: 244 KRKRECPLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEEPWKQLLLFRAS---RTNN 303

Query: 135 DSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDD 194
           DS+ E+++ QK QKMHPC+YDD     YNLR+RLS +  D  +      SD   +D  D 
Sbjct: 304 DSACEKTW-QKVQKMHPCLYDDSAGASYNLRERLSYE--DYKRGKTGNGSDIGSSDEED- 363

Query: 195 YKPVPL-GSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNR--YLVERDPIGRGRRDP 254
            +P  L GS +QA+VPEW G+  +SD KWLGT+ WPL K + +   L+ERD IG+GR+DP
Sbjct: 364 -RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDP 423

Query: 255 CGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVS 314
           CGC +P S+ CV+FH++ KR KLKLELG AF  W FD MGE     WT  + KK + ++S
Sbjct: 424 CGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTLQYWTDLELKKIKSLMS 483

Query: 315 SNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEE 367
           S PPSL  ++        PS+S+  +V Y+YNV LL+ R  Q+R+TP++I+SD +
Sbjct: 484 S-PPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSRITPHDIDSDTD 529

[Close]

BLAST of CsaV3_6G000670.1 vs. TAIR 10
Match: AT4G11400.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 205.7 bits (522), Expect = 6.9e-53
Identity = 119/350 (34.00%), Postives = 177/350 (50.57%), Query Frame = 0


Query: 77  KQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQVDS 136
           K++ + G+L WL  +A +P DP+I  +P  SKWK Y   + W QV   +  + ++R  D+
Sbjct: 218 KRDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLLVQR--DN 277

Query: 137 SS----EQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSL 196
           +        F       HP MY+DD   I  L  R S+   +LS+   S   + S   SL
Sbjct: 278 AELRYRYHPFRGHQNIHHPSMYEDDRKSIGRL--RYSIRPPNLSKHCSSSCCNGSSLVSL 337

Query: 197 DDYKP-----------------------------------VPLGSDYQARVPEWNGVISK 256
              +                                    + +G  +QA+V EW      
Sbjct: 338 SKSRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTESGVD 397

Query: 257 SDLKWLGTQDWPLKKGRN-RYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKL 316
           SD KWLGT+ WP +        +  D +G+GR D C C     V C + H++EKR +LK 
Sbjct: 398 SDSKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRMELKR 457

Query: 317 ELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKAD 376
           ELGD F  WRF++MGEEV   WT ++EK+F+D++ ++P     S+W +  ++FP + + +
Sbjct: 458 ELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQ----SFWTNAAKNFPKKKREE 517

Query: 377 LVGYYYNVFLLRRRGHQNRVTPNEINSDEESESGTATNGFGNEVHNSSGS 387
           LV YY+NVFL+ RR +QNRVTP  I+SD+E   G+    FG +   SSGS
Sbjct: 518 LVSYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSFGRDAVTSSGS 559

[Close]

BLAST of CsaV3_6G000670.1 vs. TAIR 10
Match: AT5G04110.1 (DNA GYRASE B3 )

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-31
Identity = 87/261 (33.33%), Postives = 128/261 (49.04%), Query Frame = 0


Query: 135 DSSSEQSFMQKNQK-------MHPCM-----YDDDTAPI-YNLRKRLSLDKKDLSQEPVS 194
           +++S  SF +K++K        H C       DD  +P   ++  +   D    S + VS
Sbjct: 283 ENTSGSSFEKKSKKPKSSVSSSHLCFSSRQSADDANSPSPKDVSNKTPKDVTHGSNKDVS 342

Query: 195 -KASDSSPTDSLDDYKP-VPLGSDYQARVPEWNGVISK----------SDLKWLGTQDWP 254
            K S    T   +  +P +P+G  +QA +P W     K          + L+WLGT  WP
Sbjct: 343 NKTSKDVITHGSNKTRPAIPIGPRFQAEIPVWIAPTKKGKFYGSPGDSNTLRWLGTGVWP 402

Query: 255 ---LKKGRNRYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWR 314
              LKK      V    +G GR D C C  P S  C++ H  E +  L+ E+  AF  W 
Sbjct: 403 TYSLKK-----TVHSKKVGEGRSDSCSCASPRSTNCIKRHKKEAQELLEKEINRAFSTWE 462

Query: 315 FDKMGEEVTF-AWTVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVF 367
           FD+MGEE+   +WT  +E++FE +V  NP S    +WE    +FP +SK DL+ YYYNVF
Sbjct: 463 FDQMGEEIVLKSWTAKEERRFEALVKKNPLSSSDGFWEFASNAFPQKSKKDLLSYYYNVF 522

[Close]

BLAST of CsaV3_6G000670.1 vs. TAIR 10
Match: AT2G03470.1 (ELM2 domain-containing protein )

HSP 1 Score: 117.1 bits (292), Expect = 3.3e-26
Identity = 63/175 (36.00%), Postives = 103/175 (58.86%), Query Frame = 0


Query: 196 KPVPLGSDYQARVPEW--NGVISKSDLKWLGTQDWPLKKGRNRYLVERDPIGRGR-RDPC 255
           K V +GS++QA +PE+    ++ +S+ +     +  L +     + + D  G G+ R  C
Sbjct: 121 KQVLVGSNHQADIPEFVKEEILDQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKEC 180

Query: 256 GCMDPNSVGCVQFHVSEKRHKLKLELG-DAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVS 315
            C+D  S+ CV+ H+ E R  L   +G + F++    +MGEEV   WT ++E  F  +V 
Sbjct: 181 LCLDKGSIRCVRRHIIEARESLVETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVY 240

Query: 316 SNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEE 367
           SNP S G  +W+ +  +FPSR+  +LV YY+NVF+LRRRG QNR    +++SD++
Sbjct: 241 SNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRRRGIQNRFKALDVDSDDD 295

[Close]

BLAST of CsaV3_6G000670.1 vs. TAIR 10
Match: AT2G03470.2 (ELM2 domain-containing protein )

HSP 1 Score: 117.1 bits (292), Expect = 3.3e-26
Identity = 63/175 (36.00%), Postives = 103/175 (58.86%), Query Frame = 0


Query: 196 KPVPLGSDYQARVPEW--NGVISKSDLKWLGTQDWPLKKGRNRYLVERDPIGRGR-RDPC 255
           K V +GS++QA +PE+    ++ +S+ +     +  L +     + + D  G G+ R  C
Sbjct: 120 KQVLVGSNHQADIPEFVKEEILDQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKEC 179

Query: 256 GCMDPNSVGCVQFHVSEKRHKLKLELG-DAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVS 315
            C+D  S+ CV+ H+ E R  L   +G + F++    +MGEEV   WT ++E  F  +V 
Sbjct: 180 LCLDKGSIRCVRRHIIEARESLVETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVY 239

Query: 316 SNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEE 367
           SNP S G  +W+ +  +FPSR+  +LV YY+NVF+LRRRG QNR    +++SD++
Sbjct: 240 SNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRRRGIQNRFKALDVDSDDD 294

The following BLAST results are available for this feature:

BLAST of CsaV3_6G000670.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138586.1	5.4e-233	100.00	AT-rich interactive domain-containing protein 1 [Cucumis sativus] >XP_011656344....	[more]
XP_008458204.1	4.2e-209	90.13	PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucu...	[more]
XP_038875899.1	5.5e-209	88.35	AT-rich interactive domain-containing protein 1-like [Benincasa hispida]	[more]
KAG7013748.1	4.3e-198	84.81	AT-rich interactive domain-containing protein 1, partial [Cucurbita argyrosperma...	[more]
XP_023547658.1	1.6e-197	84.30	AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of CsaV3_6G000670.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JT7	1.0e-69	46.78	AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LDD4	9.8e-52	34.00	AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsaV3_6G000670.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD11	2.6e-233	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004620 PE=4 SV=1	[more]
A0A1S3C8K0	2.0e-209	90.13	AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucumis melo ...	[more]
A0A6J1H398	1.8e-197	84.56	AT-rich interactive domain-containing protein 1 isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1H4K9	1.8e-197	84.56	AT-rich interactive domain-containing protein 1 isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1L5C2	8.8e-197	84.05	AT-rich interactive domain-containing protein 1-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of CsaV3_6G000670.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46040.1	7.4e-71	46.78	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT4G11400.1	6.9e-53	34.00	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT5G04110.1	1.2e-31	33.33	DNA GYRASE B3	[more]
AT2G03470.1	3.3e-26	36.00	ELM2 domain-containing protein	[more]
AT2G03470.2	3.3e-26	36.00	ELM2 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..395
None	No IPR available	PANTHER	PTHR46410	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2	coord: 44..394
None	No IPR available	PANTHER	PTHR46410:SF1	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1	coord: 44..394
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 297..345 e-value: 0.00565679 score: 32.5474

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G000670	CsaV3_6G000670	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G000670.1.exon2	CsaV3_6G000670.1.exon2	exon
CsaV3_6G000670.1.exon1	CsaV3_6G000670.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G000670.1.cds2	CsaV3_6G000670.1.cds2	CDS
CsaV3_6G000670.1.cds1	CsaV3_6G000670.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G000670.1	CsaV3_6G000670.1-protein	polypeptide