CsaV3_6G000670 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTCAGATGAGTTCATGAATTGTATTGCCTTTGACGACAATTCCATTTCAGATTTTTCCAAGCGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGATGTATTTCCTCGCAGAAGCAAGAAATTCAAGGATATTGAACATTGCAATACTGAAAATGGGGATGTACAAATTATTGATCCACCTTTCGTCAAGGAAACAAATGTTGTCCAGGAGAAGAGTAAGCAGGAACCAATGTTGGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCCTCAATATCCTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAGGTTTTGGTGGTTCGAGAGGAAATGTTCTTGAAAAGACAAGTTGATTCAAGTAGCGAACAATCTTTCATGCAGGTACTTTACATACATGCTCATGTTGTTTGCATTTAGATCTTTACTCATTTAAAATTGTTGATTTGCATGACGTGGTGATAAAAAAATGTCTATCTCTGTGCATGTATGAAGTTTGTCTCATGATAAAGCTGATTGTGGTAGTTTTTAGGCTGCTTTAGTCTTGTTTTGTTTTTCATATTATCAGTCCATCTTGAAATGATTTTCATACCATGCATTTTGATTAGTATATATTTACATCTTAAATAATGTTCTTGTCATTGTAAACTGAAGATCCTCATTGTGAAAGCCAAAATGGAGCTAAGACTTAATCTTTAGAATTTATCGCTGAATCACTGTAGTAATTTTTTTTTCTTTATCTGCCATAATATCTATCGTGCTAGTTTTTAATGTTATGATCCTCTTTAGTTTTTAGGAACTTCTGCAGTGGTCTTTCTTTATGTTGCTTATGGTTCCATGACCTTGTGTCTGTGTGTAAATAAAACTAAAGAATCCATCTTATCAATTCTGATAATTATGTCTTCTTAAGAAGATACGTGGAGGATTAGCTGTTTAAAATAGTGGTTCCCTTATTAAGAAGAAAATTAAACTATTTAAGACATCGATTTCATTTAGCCTTGTTCTGTTGTGGTCAATAGCTTGAAGCTTCAGCCGCTATTTTTTATTTTTGATCTGCTTGTAGTCACTAGTCAGAGTGTGCTTGAAAATGTTCTTAAGAGTATAAAAAATGCATTGAGAACATTTTCTAGGTTGGGTGATTGCAGATGCATGAATGATTTTAGTACTCTGAGAGGAAGTACTTTAGTAGAAACACTAAGCAGAAAAAAACATCATTAATTTGGAATTATTTTACCCTAAGAAATGTAGAATAGTAGCCTGTTTTTTAGAAACACGAAATAGAATAGTAGCTACAGTGTGATATTTACAAATTCTTAAGATTTTATCAGATATCCAAAATTGTCAAGTTAACCCGGAAGGACATGCATCATCTACATTAAATAAAATACCAAAGTATAACTATGATTAACATCATCTACGTTAAATAAAATACCAAAGTATAACTATGATTAACATTTAGGGATTATTTGATTCACTAGAAAAAAAAATGTTTTTCAAAACATTTTTATTTAAAACGCTTTTTATAAAACTTTTTTTAATATATGTGGGTGTACTAGTCAACTTAAGTACACCTCGACTAATCTCATGGGACAACCTGTCCGACTCTACAATATTTTGATGTCAAGAAAACTAGTAGAAAATTAATTTTTAGGTAAGTGGTCAATGTTCACTAGAAAAATTTGTTTAAAATAAACTTTAAAAATATTTTAAAATTTATTTTGAATGGTTGCTAAAATTAAAAAAGAAAAAACATTTTTATTTAAAACCGTTTTTTATATATATGAATTTTCTGGTCAACTTAAGTCCACCTCAACTAATCTCATGGTACTACATTTTGGTGCTTAGAAAACTTGATAGGAAATTAGTTTTTAGGTAAGTAGTCAATATCTACTATAAAAACTATTTAAAATAAACTTTGAAAGTGTTTCAAAATCTATTTTGCTAAATATTTCAATGTTTTCTATTTTTAAAATTAAATACTTGAAAAATTAAACGAAACACAGGACACCCTTAGATTCTCCCCATGTTAACAGAGTGAATTTGTAAAATTTAATTAGATTTTCTTTTTACAAAGCAACTGGTAATATATTGATTAAATTGGAAAATTGATCCCTATGATTTTGGAGAAAGCTTTGTGGTTTTAAAACTTAATCGTTCTTATGGTTTGAAGAATCTCATAACTAGCTCTTATTGTTTGATTTCTGCCTTAATTATGTGAAATTCAACTGGTAAACAAACTCTAATTCTATTTTTTTTTCTTTGGTGCCTTGAAGCACAAAATATTATTTTGTAATTATAGCCTAGGTCCAATTCTACAAAATTGGAAGCCGATGCTTTATTAGTTTTTGTTGGGAGAGGGGTTGCTCATCCCTCCCCTAGCTCTCTCTCTCTTCGTTTTTTTACCTTTTTTTTAAAAAATATATATTTTCAGTTACTTTAAAAAGGAGAACAAAAAAACTAGAAAACCTAATCTAGACTAAGAATTCATTTTGATACCCATCGGTGTTTTGGATCAATTTATATGCACCTCGACAGAGATAACCAACCTAACCCTACATCATTTAGATGTCATGGAATCTTACAAGATATTATACTTTGGTAGTGGTCATCATGGATCGAGCTCATGATCTCTTAGTCATTTATTTTATTTTTACCACTATATCCACAATGGTTTGTAATCTAGACTAAAAATATTTCTATCCAACCATTAAAATATCTAAATGTAGCCTCAAAATTGAGGAGATTTAAAAGCACCCAAAGTTTAGTTAAATAGCAATCTATCGCTATCACAAAAGCTAATACCAACTAAAAATAATCTTTCATTCATAGTAGCTACTAGCTACAAAGGTCGTTAAAGAAAAGTTGACCATTTTATCTCTTTAAGTTTTATCCTTGCCTTATTTTGATTCCAACCATTGAAGAACTCGAGATTTCATAATTTGGAGAATGCCCTTCATGAACTGTGCAATTGAGAATGTATACTAACTTTACCATAAACCATAAATTGATAATTAAATCGTTATTCTTCACCCTACTCTATTTTTGGTTTTTTAACTAAGATTTTTTTCCTTGTTAATTTTCTAATCTTAGGCTCTATTTCTAGTACTAACACTAAATTTTATAAGTGTACTACATATGAGAGGTGTTTTACATCATAGAAATTAAACAACGATAAAGAAAAGATAGTATGCAAAGTCTAGGGACCAAAAAATATTGACAGCAAGACAATGAAAGCAGATGAAAGAATTGACTACAAGAAAATGAAAGCAAATGATTGTGGAAGTTAGGGATCAAAATAAGATTAAAATCATTTTTGTGCCCTAAAATTTAGAACTTATATTAGTTCCTTTATTGATGTTGAGTTTAAATAATTTCTTATTGCATCAATATGTTTGAAATTTTATTATACTGTGTATAGAAACGAATTAAATTCGAAGGAAAGGAAGAATAAATGAAACAAAAAGTTAATATTTCTATATAGGTAAAATTGATTAATGTACATATATGTTCTTTTTAAAAAAAGGATTTAACAGATGTAAACAACATAATGATCAGATTACTATTTCTCATCTATTTATTCTCCTTCCTAGTTGACCACATCATTTCTATTACTTTAGCTTGAAAGTCTTTATTATTATTTGGTTCAATTTATCTTCTCTATTGCAGAAAAACCAGAAGATGCATCCTTGTATGTACGATGATGATACAGCTCCGATTTACAATCTTAGGAAGAGATTAAGCTTGGATAAAAAGGATCTTTCTCAAGAACCTGTTTCTAAAGCAAGTGATTCGTCTCCTACAGATTCATTAGATGATTACAAGCCCGTTCCTCTGGGGTCAGATTATCAAGCTCGAGTCCCGGAATGGAATGGTGTGATATCCAAGAGTGATTTAAAGTGGTTGGGAACCCAAGACTGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTTGAAAGGGATCCCATTGGAAGAGGAAGGCGAGATCCTTGTGGGTGCATGGACCCCAATTCGGTTGGCTGTGTCCAATTTCACGTTTCTGAGAAAAGGCACAAATTGAAGCTTGAGTTGGGCGACGCGTTTCTTCAATGGAGATTTGATAAGATGGGGGAAGAAGTTACATTTGCTTGGACGGTGGACGATGAGAAAAAATTCGAGGACATAGTGTCATCAAACCCTCCGTCCCTTGGGATATCTTATTGGGAAGATATCATTGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTGGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGAGTTACGCCAAATGAAATCAATAGTGATGAGGAATCAGAATCCGGAACTGCAACCAATGGATTTGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTACTCTCCTAAGAAGCCACGATAA ATGTTGTCAGATGAGTTCATGAATTGTATTGCCTTTGACGACAATTCCATTTCAGATTTTTCCAAGCGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGATGTATTTCCTCGCAGAAGCAAGAAATTCAAGGATATTGAACATTGCAATACTGAAAATGGGGATGTACAAATTATTGATCCACCTTTCGTCAAGGAAACAAATGTTGTCCAGGAGAAGAGTAAGCAGGAACCAATGTTGGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCCTCAATATCCTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAGGTTTTGGTGGTTCGAGAGGAAATGTTCTTGAAAAGACAAGTTGATTCAAGTAGCGAACAATCTTTCATGCAGAAAAACCAGAAGATGCATCCTTGTATGTACGATGATGATACAGCTCCGATTTACAATCTTAGGAAGAGATTAAGCTTGGATAAAAAGGATCTTTCTCAAGAACCTGTTTCTAAAGCAAGTGATTCGTCTCCTACAGATTCATTAGATGATTACAAGCCCGTTCCTCTGGGGTCAGATTATCAAGCTCGAGTCCCGGAATGGAATGGTGTGATATCCAAGAGTGATTTAAAGTGGTTGGGAACCCAAGACTGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTTGAAAGGGATCCCATTGGAAGAGGAAGGCGAGATCCTTGTGGGTGCATGGACCCCAATTCGGTTGGCTGTGTCCAATTTCACGTTTCTGAGAAAAGGCACAAATTGAAGCTTGAGTTGGGCGACGCGTTTCTTCAATGGAGATTTGATAAGATGGGGGAAGAAGTTACATTTGCTTGGACGGTGGACGATGAGAAAAAATTCGAGGACATAGTGTCATCAAACCCTCCGTCCCTTGGGATATCTTATTGGGAAGATATCATTGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTGGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGAGTTACGCCAAATGAAATCAATAGTGATGAGGAATCAGAATCCGGAACTGCAACCAATGGATTTGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTACTCTCCTAAGAAGCCACGATAA ATGTTGTCAGATGAGTTCATGAATTGTATTGCCTTTGACGACAATTCCATTTCAGATTTTTCCAAGCGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGATGTATTTCCTCGCAGAAGCAAGAAATTCAAGGATATTGAACATTGCAATACTGAAAATGGGGATGTACAAATTATTGATCCACCTTTCGTCAAGGAAACAAATGTTGTCCAGGAGAAGAGTAAGCAGGAACCAATGTTGGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCCTCAATATCCTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAGGTTTTGGTGGTTCGAGAGGAAATGTTCTTGAAAAGACAAGTTGATTCAAGTAGCGAACAATCTTTCATGCAGAAAAACCAGAAGATGCATCCTTGTATGTACGATGATGATACAGCTCCGATTTACAATCTTAGGAAGAGATTAAGCTTGGATAAAAAGGATCTTTCTCAAGAACCTGTTTCTAAAGCAAGTGATTCGTCTCCTACAGATTCATTAGATGATTACAAGCCCGTTCCTCTGGGGTCAGATTATCAAGCTCGAGTCCCGGAATGGAATGGTGTGATATCCAAGAGTGATTTAAAGTGGTTGGGAACCCAAGACTGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTTGAAAGGGATCCCATTGGAAGAGGAAGGCGAGATCCTTGTGGGTGCATGGACCCCAATTCGGTTGGCTGTGTCCAATTTCACGTTTCTGAGAAAAGGCACAAATTGAAGCTTGAGTTGGGCGACGCGTTTCTTCAATGGAGATTTGATAAGATGGGGGAAGAAGTTACATTTGCTTGGACGGTGGACGATGAGAAAAAATTCGAGGACATAGTGTCATCAAACCCTCCGTCCCTTGGGATATCTTATTGGGAAGATATCATTGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTGGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGAGTTACGCCAAATGAAATCAATAGTGATGAGGAATCAGAATCCGGAACTGCAACCAATGGATTTGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTACTCTCCTAAGAAGCCACGATAA MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQIIDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR* Homology
BLAST of CsaV3_6G000670 vs. NCBI nr
Match: XP_004138586.1 (AT-rich interactive domain-containing protein 1 [Cucumis sativus] >XP_011656344.1 AT-rich interactive domain-containing protein 1 [Cucumis sativus] >KGN45671.1 hypothetical protein Csa_005371 [Cucumis sativus]) HSP 1 Score: 817.4 bits (2110), Expect = 5.4e-233 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. NCBI nr
Match: XP_008458204.1 (PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_008458205.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_016902234.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 738.0 bits (1904), Expect = 4.2e-209 Identity = 356/395 (90.13%), Postives = 375/395 (94.94%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. NCBI nr
Match: XP_038875899.1 (AT-rich interactive domain-containing protein 1-like [Benincasa hispida]) HSP 1 Score: 737.6 bits (1903), Expect = 5.5e-209 Identity = 349/395 (88.35%), Postives = 378/395 (95.70%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. NCBI nr
Match: KAG7013748.1 (AT-rich interactive domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 701.4 bits (1809), Expect = 4.3e-198 Identity = 335/395 (84.81%), Postives = 363/395 (91.90%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. NCBI nr
Match: XP_023547658.1 (AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023547659.1 AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 699.5 bits (1804), Expect = 1.6e-197 Identity = 333/395 (84.30%), Postives = 364/395 (92.15%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. ExPASy Swiss-Prot
Match: Q84JT7 (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ARID1 PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.0e-69 Identity = 138/295 (46.78%), Postives = 193/295 (65.42%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. ExPASy Swiss-Prot
Match: Q9LDD4 (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARID2 PE=1 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 9.8e-52 Identity = 119/350 (34.00%), Postives = 177/350 (50.57%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. ExPASy TrEMBL
Match: A0A0A0KD11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004620 PE=4 SV=1) HSP 1 Score: 817.4 bits (2110), Expect = 2.6e-233 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. ExPASy TrEMBL
Match: A0A1S3C8K0 (AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497705 PE=4 SV=1) HSP 1 Score: 738.0 bits (1904), Expect = 2.0e-209 Identity = 356/395 (90.13%), Postives = 375/395 (94.94%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. ExPASy TrEMBL
Match: A0A6J1H398 (AT-rich interactive domain-containing protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460098 PE=4 SV=1) HSP 1 Score: 698.4 bits (1801), Expect = 1.8e-197 Identity = 334/395 (84.56%), Postives = 363/395 (91.90%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. ExPASy TrEMBL
Match: A0A6J1H4K9 (AT-rich interactive domain-containing protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460098 PE=4 SV=1) HSP 1 Score: 698.4 bits (1801), Expect = 1.8e-197 Identity = 334/395 (84.56%), Postives = 363/395 (91.90%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. ExPASy TrEMBL
Match: A0A6J1L5C2 (AT-rich interactive domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499270 PE=4 SV=1) HSP 1 Score: 696.0 bits (1795), Expect = 8.8e-197 Identity = 332/395 (84.05%), Postives = 363/395 (91.90%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. TAIR 10
Match: AT2G46040.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein ) HSP 1 Score: 265.4 bits (677), Expect = 7.4e-71 Identity = 138/295 (46.78%), Postives = 193/295 (65.42%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. TAIR 10
Match: AT4G11400.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein ) HSP 1 Score: 205.7 bits (522), Expect = 6.9e-53 Identity = 119/350 (34.00%), Postives = 177/350 (50.57%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. TAIR 10
Match: AT5G04110.1 (DNA GYRASE B3 ) HSP 1 Score: 135.2 bits (339), Expect = 1.2e-31 Identity = 87/261 (33.33%), Postives = 128/261 (49.04%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. TAIR 10
Match: AT2G03470.1 (ELM2 domain-containing protein ) HSP 1 Score: 117.1 bits (292), Expect = 3.3e-26 Identity = 63/175 (36.00%), Postives = 103/175 (58.86%), Query Frame = 0
BLAST of CsaV3_6G000670 vs. TAIR 10
Match: AT2G03470.2 (ELM2 domain-containing protein ) HSP 1 Score: 117.1 bits (292), Expect = 3.3e-26 Identity = 63/175 (36.00%), Postives = 103/175 (58.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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