CsaV3_5G035540.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTTTCTCTCCATTTCTTCTCTGGCTGTGATCGTAATCGCTCCGGAAAATTTACCGTCTCCATCAATCGCGCCAAATTCCGTCCCTCGATTAATTTTGGTGTACGTTCGCTTTCCGATTCCGAAATCCTAATTTCTTTAGATTTAGTGTGCAATCGACGTTCTCGATCACCTAATGCCTTCATTGCTGCCAGGAGTTTAGAGTTTCGGTCCTTTGCTTTACCACGGAGGGCTCTGCAGCGGAAAACATCGAAGGTCCTGAGTCGTGGAAGGTCGCAGAGTTGGATGAGGCCGTGAGACAACGGAATTCCATATTAGAGGTATTAAATATTCTGCCGACGGTGCTTCTCTCTCAGATCATTCGGTTCCTGCTGAAGTGTTTGAAGATTCTATCAGTCAGGTTGATCGGTTCCTAGCGTAGCCTTTCGGAATCCTTAAGTAAGCGATTTATACTTTTCTGAACCATTCCTTTAGATTTTGTGTGCAATCGAAGTTCTCCATCACCTAGTGCCTCCATCGCTGCCAGGAGTTTAGATTTCGGTCCTTTGATTTACCATGGAGGGCTCTGCAGTGGAGGATATTGAAGGTCCTGAGTCATGGAAGGTGGCAGAGGATGAGGCCGTGAGACAATGGAATTTCATATGAGAGGCATTATATATTCTTTCGACGGTGCTTCTCTCTCAGATTGTTCGATTCCTGCTGAAATGTTTGAAGATTCTATCAGTCAGGTTGATCGGTTCCTAGCGAAGCCTTTCAGAATCCTCAAGTAAGCGATTTATCCTTTTCTGAACCATTCCACTTGGCATTTTGTTATTTGTGTGATATCCGATTGTTTAGGTGTGATTTCATGGAAGAATTTTCTAATAGCTATTTTGAGAGGTAGATAGAATAAAATTGCTTATGATATTATACGTTTTCTTTTCTTTTCCGTATTCACACACGTCTACTTTGATCGCACAGACCAGATCCTGTAGTCTACGTAGTTCTGATTGTATGGTAGGTTTTCTTTTCTTTTCAATAAGCATGTACGTGTATGTTGAGTTCTCAGAGGCAGTGTTCTAACTAGTTTTTCCATTTGATTTCTGTCAACAACTCCTTAATAATAGTTTTTTCTCTACAATGTTGATAGAATAAATTGCAGACTATATCGTAGGTTTTCTATCCTTTCCTATATGCATACATGTCTACATTAAGTTCACAGTGGTGGTGATCTAAGTAGTTTTTTCTATTGATTCGCTGAAGATGAATCTGCTAATAAGTTTTTTGGTAAAACGAAAATTGAATAAAACTGGTGACCAGATATCGTTAGTTATTCCTTCATGTTCTATATATGAACGTCTACATTGAGTTCATAGACGTGGTGTTCTCAGTAGTTTCTCCATATGTTTGACATTTTGATATGTCATGCTAATGCATTCGATGCTGATGCTATTCAGTTCTTTTCATTAGTATGTTATAGAGAATCCTTGCATTATCAACCATAGCTTGTTATTTACTAAGTACGTTTGCTGTTGTTGGTTTATTAGTGTTGTTGCTTGGTTAGTTAATTTGATGGAAAAGCCTTCGTAAATAGAGTCAAGCCTCTGTATACATTACTTTTAGTTAAATTATAAATTTAGTCCTTGAACTCTGACATTTGGATTTATTTAGTTAATGAACTTTTTAAAATATCATATCGATTTCTTTATATTCAAATTTCTGTCTAATAAGTCTTTAAACTTTAAACTTTTTTTGTTCAAGAAGTATAAAATTTTAAAAACTCAATTGATTTTTGAAATTTATGTTACTAGGAAACTCAAACTTTCAATTTTGTATCTAGTAGAATAGTGAATTTAAAAAAATAATAATAAAAGTTGTGACACTAAATAAAATTCACAAATTTAGAATTTAGTAAATTTGAAAACGTAGAGTTAACGTGTTTCTGCTGTGATGAACCATATGGTCCTCCAATAGAACTATATTGTCCTTCAACAGAGTTATTTGGCCTTATAGTACAGAGTTATTTGGCCTTATAGTGCAAAAGTTGATCCACTCCATGTTAGGGATATTTGCGAACTCCTCTCAGTATCCCCTTCAGCAATTTGGAATGCCTTTTATTTATCGTCGTAAGTTCATCAGCCCTTTCTCATGCATAACTCTCTTCATTCAACCTCATCTTTTGATATGAATGAACAGTAAAGTAGTAAAGCCTTCCTTCTGCAAAATTTATTTTTGCTCTCTCCCTTTAGATAATACATTCAACATTTCATTTACCGATCCCTTTTTATCCTGCCTATTTTCAGCATTGATCAGGTTTGTTTCATTAATTTATTTATTTCTTGTAGATCTTTTGCCTTCAGCTATTGGATTAACACTGAATTCAGTAGAAACCAATGACTTGTTACTTTTATGAACTTTATATTGATACTTGATTCCAATGGTTATTGCCTGTTCTAAGATGATCGTGAATGTCAATTAGATTGTAAACTGCGCCACCATTCCCTTTTGTGCCTATGACGTCGAAAGACTTATAGTAGCATCTGTCGTTGGGCATGTCTACTACGAAGGTATTTACTCTCGTTTCAACATATATTATGTCCATCTCCATTCTTCATTCTCCAAAAGAAATGGGCAATTTTTTTTAATAAAAAAAGTATAACATATATAACGATTTTGTTTATTTTTTAAAATTTCTTTCATCTCAATTAATACAGTTAATCAGCATAGTTATAACGTGGTCATTTGGCATGTAATTTTTTTAGGTCCATGGTTTCTTATGACACACATATTTGCTTGAGAGCATCGTTATGTATGAGTTCCTAAATATGTATTCCTCGCCACTACTTGATAATATGTATTTTCCATCACTATTTAAGTTTATGAGATGCTTTGCACATTCAAGCGTCAACATCCCAAGGTACGAATTCCTTTTACCACTCGTTCGGAGTTTATTGCATGGGTAATGTGTCATTGGTTTGTGTATACATACCTTCCTTTTCTTATGATTTAAAAGATTAGATTGCAAAATAAAAAAATTAGCGTAAATTAGGCCTTTCCACCCTATTTTGTAGAAAGGGTTATTTCTAAGTGCATTCATCATGAGCCAATAGAACTGTCTTAGGAAATTATATTTAAAGGTAAAACTTAAAAGTGGTATCTTCATTTTATTTTATTCTTTTCAAATTTCATGAACTTGATTTTTTTCCTACTCGTTATCTTTTTTATTATTTATTTCAAATTAGATTGTGCCGTGTGTAACCTTCAAAATTTATATTTGCAACCAATGATCATCTATGGTATCTCG ATGCATTTTCTCTCCATTTCTTCTCTGGCTGTGATCGTAATCGCTCCGGAAAATTTACCGTCTCCATCAATCGCGCCAAATTCCGTCCCTCGATTAATTTTGGAGTTTAGAGTTTCGGTCCTTTGCTTTACCACGGAGGGCTCTGCAGCGGAAAACATCGAAGGTCCTGAGTCGTGGAAGGTCGCAGAGTTGGATGAGGCCGTGAGACAACGGAATTCCATATTAGAGGTATTAAATATTCTGCCGACGGTGCTTCTCTCTCAGATCATTCGGTTCCTGCTGAAGTGTTTGAAGATTCTATCAGTCAGGTTGATCGGTTCCTAG ATGCATTTTCTCTCCATTTCTTCTCTGGCTGTGATCGTAATCGCTCCGGAAAATTTACCGTCTCCATCAATCGCGCCAAATTCCGTCCCTCGATTAATTTTGGAGTTTAGAGTTTCGGTCCTTTGCTTTACCACGGAGGGCTCTGCAGCGGAAAACATCGAAGGTCCTGAGTCGTGGAAGGTCGCAGAGTTGGATGAGGCCGTGAGACAACGGAATTCCATATTAGAGGTATTAAATATTCTGCCGACGGTGCTTCTCTCTCAGATCATTCGGTTCCTGCTGAAGTGTTTGAAGATTCTATCAGTCAGGTTGATCGGTTCCTAG MHFLSISSLAVIVIAPENLPSPSIAPNSVPRLILEFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRFLLKCLKILSVRLIGS* Homology
BLAST of CsaV3_5G035540.1 vs. NCBI nr
Match: KGN52196.1 (hypothetical protein Csa_008631 [Cucumis sativus]) HSP 1 Score: 198.4 bits (503), Expect = 3.2e-47 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsaV3_5G035540.1 vs. NCBI nr
Match: KAA0034658.1 (R3H domain-containing protein 2-like [Cucumis melo var. makuwa] >TYK09209.1 R3H domain-containing protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 1.9e-10 Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of CsaV3_5G035540.1 vs. ExPASy TrEMBL
Match: A0A0A0KWM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615190 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsaV3_5G035540.1 vs. ExPASy TrEMBL
Match: A0A5D3CFX4 (R3H domain-containing protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002020 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 9.0e-11 Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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